MD03G1131300.v1.1

NB-ARC domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0000154
Physical Location & Seq
Reverse (-)
12953623 .. 12957590
3968 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1131300.v1.1.491

Sequence Viewer

Length: 1929 bp
ATGGGAGAAACAGGATCACTGTTTTATGCCTGCAATGCAGTGACTGATGTGAAAGTCAATAACTCATGGTACATTGATAGTGGTTGTAGTAACCACATGACAGGAGATGAGAGATTATTGGTCAATGTTCAAAGAGGTTTGACATCCAAAGTGAAAATGGGAACTGGAGAAATCTGTGAAGTGGCAGGAAAGGGAACTTTGGTGATTGAAACTAAATTGGGAAGAAAACATATACAAGAAGTAATGCTTGTTCCCGGACTTGAGGAAAATCTTCTAAGTGTAGGGCAAATGATGGAAAATGGTTATTATTTGTTGTTTGGAGGTGATGTAGTGAATATTTTTGATGGATGGTCACTGGATAATTTAGTAGTAAGGGTACATATGACCAGCAATCGATGTTTTCCTTTGACAATGTTGCCTGCAACACAGTATGCACTAAGGGCAGGTATCACTCGTTGTTCTCAAATATGGCATAAGAGGTTGGGTCATTTGAATGAGAGAAGTCTCAAGGTACTTGAAGAACAGGAGTTGGTGCATGGATTACCTAAATTAGAAATGTCCCAAAGTGTGTGTGAAGGTTGCATGTTGGGTAAACAACACAGAGACTCATTCCCTTCCCAATCAACTTGGAGAGCTAAAGACCCACTAGAGTTGATTCATACTGATCTCTGTGGTCCAATGCAAGTAGAGTCTCATTCTGGAAACAAATATTTTTTGTTGTTTACAGATGACTGTACAAGGATGTCATGGGTGTATTTTTTGAGAAACAAGTCTGATGTGTTTGAATGTTTCAGAAAGTTCAAGGCAATGACTGAGTTACAATGCGGATATAAGGTTAAATGTCTCAGGAGTGATCGAGGGGGAGAATTCCTTTCTGCAGAGTTTGACAAATACTGTAATGGACAAGGAATTCAGAGACAATTGACTATGGCCTACACTCCTCAACAGAATGGAGTGTCCGAAAGAAAGAATAGGACTGTGGTGGAGATGGCAAAGTCAATGCTACATGAAAAAAACCTTCCATATGCATTTTGGGCAGAAGCAGTGAATACTGCAATCTATTTGATCAATAGGTGTCCTACTAAAGCTTTGAAGAAGTCAACCCCATTTAAAGCTTACAGTGGCAGAAAACCTGGAATAGCTCATTTGAAGATATTTGGCTCACTGTGCTATGTGCATATCCCTTCCAATCTCCGACATAAGTTGGAAGAAAACAGTCACAAGTGTATCTTTGTAGGATATGGTTCAAGTGAGAAGGGCTACAGGTTGTTTGATCCTATTTCAAGGAAGATTGTTCTCTCAAGGGATGTCACATTTGATGAGAGTAAATCTTGGGATTGGAACTGCAATATAGATACTGGAGTGACATTTCCAGTTATCACTGAACATAAGAATGCTAATGAAATCTGTGAAGTTGATGACAATTCTCAGTTTGAAGAATACAATGTTTCTCAAAGTGAGAATGTGCTTGAGAGATCTCCAACTTATGATGATACACCGAAGAAATGGAGAAGTATCAATGAAATCATGGCTCAATGCAACATGTGTGTTATTGAACCAGAAAGCTATGAGGATGCAGTCAAAGATGATTCATGGAGGAGTGCAATGAAAACTGAATTGGACATGATTGAGAAGAACAACACATGGCAGCTTGTTGAGAGACCATATGACAAGCCTGTTATTGGTGTTAGATGGGTTTATAAGACCAAACTTAATCTGGATGGCACCGTGCAGAAGAATAAAGCTCGGCTGGTGGTTAAAGGCTATTCACAAAAGCCCGGAATCGACTATAATGAAACTTTTGCCCCTGTGGCAAGGTTGGATACAATTAGAACTTTAATTGCCCTTGCTGCACAGAAGAAATGGAACTTGTATCAACTAGATGTAAAGTCTGCATTTCTCAATGGGGTACTGAAAGAAGAAGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

643

Amino Acids

73.33

Weight (kDa)

8.11

Isoelectric Point (pI)

42.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pol_BBD PF22936 23 - 102 2.5e-23 Pol polyprotein, beta-barrel domain
gag_pre-integrs PF13976 140 - 199 1.8e-13 GAG-pre-integrase domain
rve PF00665 214 - 314 1.3e-09 Integrase core domain
SH3_retrovirus PF25597 388 - 450 3.4e-27 Retroviral polymerase SH3-like domain
RVT_2 PF07727 546 - 642 1.5e-31 Reverse transcriptase (RNA-dependent DNA polymerase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000154)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02351 FvH4_1g18383 FvH4_1g18442 FvH4_1g19622 FvH4_2g08148 FvH4_2g16312 FvH4_3g06912 FvH4_3g10761 FvH4_3g12332 FvH4_3g12332 FvH4_3g14182 FvH4_3g21021 FvH4_3g35231 FvH4_3g45132 FvH4_4g08663 FvH4_4g30271 FvH4_4g30272 FvH4_4g30901 FvH4_4g30902 FvH4_5g12471 FvH4_5g22951 FvH4_6g07331 FvH4_6g07332 FvH4_6g41872 FvH4_6g43841 FvH4_6g43842 FvH4_6g48811 FvH4_7g03911 FvH4_7g13272 FvH4_7g21181 FvH4_7g29024 FvH4_7g33702
malus_domestica MD00G1037700.v1.1 MD01G1037300.v1.1 MD01G1096700.v1.1 MD01G1101100.v1.1 MD01G1129400.v1.1 MD02G1295200.v1.1 MD03G1131300.v1.1 MD04G1072100.v1.1 MD05G1104800.v1.1 MD07G1028600.v1.1 MD07G1274600.v1.1 MD08G1027200.v1.1 MD09G1044400.v1.1 MD09G1044700.v1.1 MD09G1129500.v1.1 MD09G1238700.v1.1 MD10G1011700.v1.1 MD10G1071400.v1.1 MD10G1108600.v1.1 MD10G1162100.v1.1 MD10G1162300.v1.1 MD11G1016700.v1.1 MD11G1074500.v1.1 MD15G1058600.v1.1 MD15G1383000.v1.1 MD16G1192200.v1.1 MD17G1077400.v1.1 MD17G1077500.v1.1
pyrus_communis pycom01g03520 pycom02g00350 pycom03g09910 pycom03g13960 pycom03g13970 pycom03g19180 pycom04g08410 pycom04g10140 pycom06g03750 pycom07g09240 pycom07g09260 pycom08g20130 pycom09g11020 pycom10g12690 pycom14g04140 pycom14g05710 pycom16g06380 pycom17g05500 pycom808g00140
rosa_chinensis RchiOBHm_Chr1g0316211 RchiOBHm_Chr1g0319901 RchiOBHm_Chr1g0321811 RchiOBHm_Chr1g0329831 RchiOBHm_Chr1g0330721 RchiOBHm_Chr1g0330731 RchiOBHm_Chr1g0368461 RchiOBHm_Chr1g0381111 RchiOBHm_Chr2g0154461 RchiOBHm_Chr2g0164521 RchiOBHm_Chr2g0175301 RchiOBHm_Chr3g0451301 RchiOBHm_Chr3g0453691 RchiOBHm_Chr3g0470191 RchiOBHm_Chr3g0486561 RchiOBHm_Chr4g0409141 RchiOBHm_Chr4g0409151 RchiOBHm_Chr4g0421231 RchiOBHm_Chr4g0440701 RchiOBHm_Chr5g0018211 RchiOBHm_Chr5g0023611 RchiOBHm_Chr5g0045971 RchiOBHm_Chr5g0056061 RchiOBHm_Chr5g0063381 RchiOBHm_Chr5g0064011 RchiOBHm_Chr5g0064021 RchiOBHm_Chr5g0064041 RchiOBHm_Chr6g0259681 RchiOBHm_Chr6g0259691 RchiOBHm_Chr6g0296531 RchiOBHm_Chr7g0186421 RchiOBHm_Chr7g0192321 RchiOBHm_Chr7g0198271 RchiOBHm_Chr7g0198951 RchiOBHm_Chr7g0237911
rosa_laevigata RLG00000026946
rosa_roxburghii Rroxscaffold_1G00014460 Rroxscaffold_1G00014610 Rroxscaffold_1G00028950 Rroxscaffold_1G00052630 Rroxscaffold_2G00104760 Rroxscaffold_2G00138900 Rroxscaffold_2G00145210 Rroxscaffold_3G00220110 Rroxscaffold_4G00297860 Rroxscaffold_4G00321570 Rroxscaffold_5G00332990 Rroxscaffold_5G00360870
rosa_samantha Rh1AG319600 Rh1CG299100 Rh4DG385900 Rh5BG032200
rosa_wichuraiana Rw0G002380 Rw0G003050 Rw0G003940 Rw1G002730 Rw1G003260 Rw1G005490 Rw1G016140 Rw1G016150 Rw1G017930 Rw1G017940 Rw1G022540 Rw1G022630 Rw1G031080 Rw1G039680 Rw2G003340 Rw2G003720 Rw2G006640 Rw2G020790 Rw2G025650 Rw2G028430 Rw2G029550 Rw2G034920 Rw2G040820 Rw2G048420 Rw2G048570 Rw3G010040 Rw3G022790 Rw3G023350 Rw3G025140 Rw3G028810 Rw4G000680 Rw4G003350 Rw4G004640 Rw4G026650 Rw4G034500 Rw5G008490 Rw5G020650 Rw5G023000 Rw5G033610 Rw5G037280 Rw5G046620 Rw5G050250 Rw6G001410 Rw6G005690 Rw6G005820 Rw6G010920 Rw6G022790 Rw6G023940 Rw6G026290 Rw6G028610 Rw6G031260 Rw6G036550 Rw6G036560 Rw7G015300 Rw7G017250 Rw7G018150 Rw7G031960 Rw7G036490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1701
Acc36I ACCTGC 1 cut(s) 434
AccB1I GGYRCC 1 cut(s) 1724
AciI CCGC 1 cut(s) 825
AclWI GGATC 2 cut(s) 22, 1268
AcsI RAATTY 2 cut(s) 866, 909
AfaI GTAC 5 cut(s) 71, 378, 513, 736, 1911
AfiI CCNNNNNNNGG 1 cut(s) 1682
AflIII ACRYGT 1 cut(s) 1542
AjnI CCWGG 1 cut(s) 1132
AjuI GAANNNNNNNTTGG 2 cut(s) 1601, 1633
AluBI AGCT 7 cut(s) 635, 1088, 1115, 1142, 1566, 1651, 1745
AluI AGCT 7 cut(s) 635, 1088, 1115, 1142, 1566, 1651, 1745
Alw26I GTCTC 6 cut(s) 509, 597, 696, 848, 910, 1654
AlwI GGATC 2 cut(s) 22, 1268
AlwNI CAGNNNCTG 1 cut(s) 44
AoxI GGCC 1 cut(s) 930
ApeKI GCWGC 2 cut(s) 1648, 1850
ApoI RAATTY 2 cut(s) 866, 909
Asp700I GAANNNNTTC 1 cut(s) 270
AspS9I GGNCC 1 cut(s) 674
AsuC2I CCSGG 2 cut(s) 255, 1779
AsuHPI GGTGA 2 cut(s) 214, 335
AvaII GGWCC 1 cut(s) 674
BaeI ACNNNNGTAYC 4 cut(s) 1210, 1243, 1347, 1380
BanI GGYRCC 1 cut(s) 1724
BbvI GCAGC 2 cut(s) 1660, 1837
BccI CCATC 6 cut(s) 286, 338, 342, 982, 1686, 1715
BciT130I CCWGG 1 cut(s) 1134
BciVI GTATCC 1 cut(s) 1816
BclI TGATCA 1 cut(s) 1065
BcnI CCSGG 2 cut(s) 255, 1779
BcoDI GTCTC 6 cut(s) 509, 597, 696, 848, 910, 1654
BfaI CTAG 2 cut(s) 647, 1880
BfmI CTRYAG 2 cut(s) 876, 1261
BfuAI ACCTGC 1 cut(s) 434
BfuI GTATCC 1 cut(s) 1816
BglI GCCNNNNNGGC 1 cut(s) 1811
BglII AGATCT 1 cut(s) 1475
BisI GCNGC 2 cut(s) 1649, 1851
BlsI GCNGC 2 cut(s) 1650, 1852
Bme1390I CCNGG 3 cut(s) 255, 1134, 1779
Bme18I GGWCC 1 cut(s) 674
BmgT120I GGNCC 1 cut(s) 674
BmiI GGNNCC 1 cut(s) 1726
BmrFI CCNGG 3 cut(s) 255, 1134, 1779
BmsI GCATC 1 cut(s) 1564
BpmI CTGGAG 2 cut(s) 186, 1380
BpuEI CTTGAG 4 cut(s) 281, 491, 1285, 1490
BpuMI CCSGG 2 cut(s) 255, 1779
Bsa29I ATCGAT 1 cut(s) 394
BsaI GGTCTC 1 cut(s) 1654
BsaXI ACNNNNNCTCC 2 cut(s) 312, 342
Bsc4I CCNNNNNNNGG 1 cut(s) 1682
Bse1I ACTGG 4 cut(s) 169, 360, 1363, 1373
Bse3DI GCAATG 3 cut(s) 40, 813, 1611
BseBI CCWGG 1 cut(s) 1134
BseCI ATCGAT 1 cut(s) 394
BseGI GGATG 6 cut(s) 143, 353, 747, 1312, 1579, 1726
BseLI CCNNNNNNNGG 1 cut(s) 1682
BseMI GCAATG 3 cut(s) 40, 813, 1611
BseMII CTCAG 3 cut(s) 804, 859, 1442
BseNI ACTGG 4 cut(s) 169, 360, 1363, 1373
BseRI GAGGAG 2 cut(s) 930, 1612
BseXI GCAGC 2 cut(s) 1660, 1837
BsgI GTGCAG 2 cut(s) 1751, 1836
BshFI GGCC 1 cut(s) 932
BshNI GGYRCC 1 cut(s) 1724
BshVI ATCGAT 1 cut(s) 394
BsiSI CCGG 2 cut(s) 255, 1779
BslFI GGGAC 1 cut(s) 544
BslI CCNNNNNNNGG 1 cut(s) 1682
BsmAI GTCTC 6 cut(s) 509, 597, 696, 848, 910, 1654
BsmFI GGGAC 1 cut(s) 544
BsmI GAATGC 1 cut(s) 1399
BsnI GGCC 1 cut(s) 932
Bso31I GGTCTC 1 cut(s) 1654
Bsp1407I TGTACA 1 cut(s) 734
Bsp143I GATC 6 cut(s) 14, 664, 853, 1065, 1273, 1475
BspACI CCGC 1 cut(s) 825
BspANI GGCC 1 cut(s) 932
BspCNI CTCAG 3 cut(s) 805, 858, 1441
BspDI ATCGAT 1 cut(s) 394
BspLI GGNNCC 1 cut(s) 1726
BspMAI CTGCAG 1 cut(s) 880
BspMI ACCTGC 1 cut(s) 434
BspPI GGATC 2 cut(s) 22, 1268
BspT107I GGYRCC 1 cut(s) 1724
BspTNI GGTCTC 1 cut(s) 1654
BsrDI GCAATG 3 cut(s) 40, 813, 1611
BsrGI TGTACA 1 cut(s) 734
BsrI ACTGG 4 cut(s) 169, 360, 1363, 1373
BssMI GATC 6 cut(s) 14, 664, 853, 1065, 1273, 1475
Bst2UI CCWGG 1 cut(s) 1134
Bst4CI ACNGT 9 cut(s) 21, 429, 734, 896, 979, 1121, 1167, 1217, 1729
BstAUI TGTACA 1 cut(s) 734
BstC8I GCNNGC 2 cut(s) 31, 420
BstDEI CTNAG 5 cut(s) 275, 437, 813, 845, 1428
BstF5I GGATG 6 cut(s) 143, 353, 747, 1312, 1579, 1726
BstKTI GATC 6 cut(s) 17, 667, 856, 1068, 1276, 1478
BstMAI GTCTC 6 cut(s) 509, 597, 696, 848, 910, 1654
BstMBI GATC 6 cut(s) 14, 664, 853, 1065, 1273, 1475
BstMWI GCNNNNNNNGC 6 cut(s) 35, 440, 1034, 1167, 1811, 1850
BstNI CCWGG 1 cut(s) 1134
BstNSI RCATGY 2 cut(s) 586, 1546
BstSCI CCNGG 3 cut(s) 253, 1132, 1777
BstSFI CTRYAG 2 cut(s) 876, 1261
BstV1I GCAGC 2 cut(s) 1660, 1837
BstX2I RGATCY 1 cut(s) 1475
BstYI RGATCY 1 cut(s) 1475
Bsu15I ATCGAT 1 cut(s) 394
BsuI GTATCC 1 cut(s) 1816
BsuRI GGCC 1 cut(s) 932
BsuTUI ATCGAT 1 cut(s) 394
BtsCI GGATG 6 cut(s) 143, 353, 747, 1312, 1579, 1726
BtsI GCAGTG 2 cut(s) 45, 1050
BtsIMutI CAGTG 7 cut(s) 17, 45, 353, 1050, 1126, 1163, 1380
BveI ACCTGC 1 cut(s) 434
Cac8I GCNNGC 2 cut(s) 31, 420
CaiI CAGNNNCTG 1 cut(s) 44
Cfr13I GGNCC 1 cut(s) 674
ClaI ATCGAT 1 cut(s) 394
Csp6I GTAC 5 cut(s) 70, 377, 512, 735, 1910
CspCI CAANNNNNGTGG 2 cut(s) 633, 668
CviQI GTAC 5 cut(s) 70, 377, 512, 735, 1910
DdeI CTNAG 5 cut(s) 275, 437, 813, 845, 1428
DpnI GATC 6 cut(s) 16, 666, 855, 1067, 1275, 1477
DpnII GATC 6 cut(s) 14, 664, 853, 1065, 1273, 1475
DraI TTTAAA 1 cut(s) 1111
Eco31I GGTCTC 1 cut(s) 1654
Eco47I GGWCC 1 cut(s) 674
EcoRI GAATTC 2 cut(s) 866, 909
EcoRII CCWGG 1 cut(s) 1132
EcoT22I ATGCAT 1 cut(s) 1030
FalI AAGNNNNNCTT 4 cut(s) 231, 263, 1214, 1246
FaqI GGGAC 1 cut(s) 544
FauNDI CATATG 3 cut(s) 381, 1024, 1666
FbaI TGATCA 1 cut(s) 1065
Fnu4HI GCNGC 2 cut(s) 1649, 1851
FokI GGATG 6 cut(s) 130, 360, 754, 1319, 1586, 1733
Fsp4HI GCNGC 2 cut(s) 1649, 1851
FspBI CTAG 2 cut(s) 647, 1880
GluI GCNGC 2 cut(s) 1649, 1851
GsuI CTGGAG 2 cut(s) 186, 1380
HaeIII GGCC 1 cut(s) 932
HapII CCGG 2 cut(s) 255, 1779
HincII GTYRAC 1 cut(s) 1101
HindII GTYRAC 1 cut(s) 1101
HindIII AAGCTT 2 cut(s) 1086, 1113
HinfI GANTC 5 cut(s) 605, 655, 689, 1589, 1782
HpaII CCGG 2 cut(s) 255, 1779
HphI GGTGA 2 cut(s) 214, 335
Hpy166II GTNNAC 3 cut(s) 593, 723, 1101
Hpy188I TCNGA 5 cut(s) 775, 794, 915, 961, 1196
Hpy188III TCNNGA 3 cut(s) 699, 847, 1718
Hpy8I GTNNAC 3 cut(s) 593, 723, 1101
HpyAV CCTTC 5 cut(s) 569, 624, 1028, 1194, 1249
HpyCH4III ACNGT 9 cut(s) 21, 429, 734, 896, 979, 1121, 1167, 1217, 1729
HpyF10VI GCNNNNNNNGC 6 cut(s) 35, 440, 1034, 1167, 1811, 1850
HpyF3I CTNAG 5 cut(s) 275, 437, 813, 845, 1428
Ksp22I TGATCA 1 cut(s) 1065
Kzo9I GATC 6 cut(s) 14, 664, 853, 1065, 1273, 1475
Lsp1109I GCAGC 2 cut(s) 1660, 1837
LweI GCATC 1 cut(s) 1564
MaeI CTAG 2 cut(s) 647, 1880
MaeIII GTNAC 7 cut(s) 40, 89, 351, 816, 1217, 1309, 1363
MalI GATC 6 cut(s) 16, 666, 855, 1067, 1275, 1477
MboI GATC 6 cut(s) 14, 664, 853, 1065, 1273, 1475
MfeI CAATTG 1 cut(s) 920
MflI RGATCY 1 cut(s) 1475
MlyI GAGTC 2 cut(s) 599, 698
MmeI TCCRAC 4 cut(s) 1185, 1219, 1505, 1800
MnlI CCTC 8 cut(s) 128, 256, 314, 471, 851, 951, 1564, 1590
Mph1103I ATGCAT 1 cut(s) 1030
MroXI GAANNNNTTC 1 cut(s) 270
MseI TTAA 5 cut(s) 837, 1110, 1713, 1758, 1838
MslI CAYNNNNRTG 2 cut(s) 492, 1392
MspI CCGG 2 cut(s) 255, 1779
MspR9I CCNGG 3 cut(s) 255, 1134, 1779
MunI CAATTG 1 cut(s) 920
Mva1269I GAATGC 1 cut(s) 1399
MvaI CCWGG 1 cut(s) 1134
MwoI GCNNNNNNNGC 6 cut(s) 35, 440, 1034, 1167, 1811, 1850
NciI CCSGG 2 cut(s) 255, 1779
NdeI CATATG 3 cut(s) 381, 1024, 1666
NdeII GATC 6 cut(s) 14, 664, 853, 1065, 1273, 1475
NlaIV GGNNCC 1 cut(s) 1726
NmeAIII GCCGAG 1 cut(s) 1726
NmuCI GTSAC 5 cut(s) 40, 351, 1217, 1309, 1363
NsiI ATGCAT 1 cut(s) 1030
NspI RCATGY 2 cut(s) 586, 1546
PciI ACATGT 1 cut(s) 1542
PctI GAATGC 1 cut(s) 1399
PdmI GAANNNNTTC 1 cut(s) 270
PfeI GAWTC 3 cut(s) 655, 1589, 1782
PfoI TCCNGGA 1 cut(s) 253
PkrI GCNGC 2 cut(s) 1650, 1852
PleI GAGTC 2 cut(s) 599, 697
PpsI GAGTC 2 cut(s) 599, 697
PscI ACATGT 1 cut(s) 1542
PsiI TTATAA 1 cut(s) 1701
Psp6I CCWGG 1 cut(s) 1132
PspGI CCWGG 1 cut(s) 1132
PspN4I GGNNCC 1 cut(s) 1726
PspPI GGNCC 1 cut(s) 674
PsrI GAACNNNNNNTAC 2 cut(s) 234, 266
PstI CTGCAG 1 cut(s) 880
PstNI CAGNNNCTG 1 cut(s) 44
PsuI RGATCY 1 cut(s) 1475
RsaI GTAC 5 cut(s) 71, 378, 513, 736, 1911
RsaNI GTAC 5 cut(s) 70, 377, 512, 735, 1910
RseI CAYNNNNRTG 2 cut(s) 492, 1392
SaqAI TTAA 5 cut(s) 837, 1110, 1713, 1758, 1838
SatI GCNGC 2 cut(s) 1649, 1851
Sau3AI GATC 6 cut(s) 14, 664, 853, 1065, 1273, 1475
Sau96I GGNCC 1 cut(s) 674
SchI GAGTC 2 cut(s) 599, 698
ScrFI CCNGG 3 cut(s) 255, 1134, 1779
SfaNI GCATC 1 cut(s) 1564
SfcI CTRYAG 2 cut(s) 876, 1261
SinI GGWCC 1 cut(s) 674
SmiMI CAYNNNNRTG 2 cut(s) 492, 1392
SmlI CTYRAG 4 cut(s) 260, 506, 1300, 1469
SmoI CTYRAG 4 cut(s) 260, 506, 1300, 1469
SsiI CCGC 1 cut(s) 825
SspI AATATT 2 cut(s) 337, 710
SspMI CTAG 2 cut(s) 647, 1880
StyD4I CCNGG 3 cut(s) 253, 1132, 1777
TaaI ACNGT 9 cut(s) 21, 429, 734, 896, 979, 1121, 1167, 1217, 1729
TaqI TCGA 3 cut(s) 394, 856, 1785
TatI WGTACW 1 cut(s) 734
TfiI GAWTC 3 cut(s) 655, 1589, 1782
Tru1I TTAA 5 cut(s) 837, 1110, 1713, 1758, 1838
Tru9I TTAA 5 cut(s) 837, 1110, 1713, 1758, 1838
TscAI CASTG 7 cut(s) 24, 45, 360, 1050, 1126, 1170, 1387
TseFI GTSAC 5 cut(s) 40, 351, 1217, 1309, 1363
TseI GCWGC 2 cut(s) 1648, 1850
Tsp45I GTSAC 5 cut(s) 40, 351, 1217, 1309, 1363
TspDTI ATGAA 7 cut(s) 647, 1023, 1416, 1536, 1581, 1622, 1809
TspRI CASTG 7 cut(s) 24, 45, 360, 1050, 1126, 1170, 1387
VpaK11BI GGWCC 1 cut(s) 674
XapI RAATTY 2 cut(s) 866, 909
XceI RCATGY 2 cut(s) 586, 1546
XcmI CCANNNNNNNNNTGG 3 cut(s) 154, 1029, 1714
XmnI GAANNNNTTC 1 cut(s) 270
XspI CTAG 2 cut(s) 647, 1880
Zsp2I ATGCAT 1 cut(s) 1030
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.