MD03G1182700.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Forward (+)
24931665 .. 24934511
2847 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1182700.v1.1.491

Sequence Viewer

Length: 2265 bp
ATGAGTTCTAGTTTTCGATTGAATTTATACCGAAAGACGAAAACTACTACAATTAAGGTGAGAAGTCGTTTCCTACTATCAAAGATGTTGTCGATGATACAATGCTTGTGTTATATCTATATGATGATTGTGGCTAATTACTTAACTGCAGGAGCATTAGCAATAGCTCATACCAATTTCAGCACAGATCAATCTGCGCTTCTTGCTCTCAAGGCTCACCCTCAAAACATCTTGACCGCCAACTGGTCCTCTGCCTCCAATTCCAACATTTGCAACTGGGTTGGCGTTACCTGCTGTGCTCGCCACCACAGAGTCACGGCCTTAAATATCCCGTACATGGGTCTTGCCGGACTTATTCCTCCGCATCTTGGCAACCTCTCATTTCTCGTTGAGTTGGGCCTTCAGAATAATAGTTTTCATGGTCCCCTACCCCAAGAACTGCCTCGTTTGTGCCGGTTGAAGGCGATTAACTTTGGAAACAACAGCTTTATGGGAACCATTCCTTTGTGGTTTGGGTCCTTTGCTAAACTTCAAACCATCAAATTGTACGATAATGACTTCTCTGGTTTCATACCCGCTGCTATCTTCAACTTATCTGCACTCGAAAACATTTACCTGATGAGGAACCAACTATCGGGTAGCATACCCAGAGAAATAGGCAACTTAACAATGGTGAAGGGCATATACCTTGACGACAACAAGTTCGAAGAACTTCCGAACGAGATAGGCAGTTTAGGTCAGCTGGAGGAGTTGTTTGTGCAGGACAATGCCCTAAAAGGCTCTGCTTTTGTGCCTGTCCTTAACATATCTTCTTTGACTACTTTGGCTTTATCCGAAAACAACATGAGTGGTATTCTTCCGGACAATATGTGTGAGCATCTTTCGAGTATTCAACGATTTTCTTTGAATCAAAACCAGCTTGACGGTCTGATTCCCTCCAAACTGTGGCAATGCAAAGAGCTTCGTGTAATTGCATTAGAGTCTAACAATTTCCGTGGGAGCATACCCAAAAGTCTTGGCAATTTGACCTACTTAACCGAGATTTTTCTTCGTTTCAATAATTTAACAGGTACAATACCGGATGAGATTGGTGATCTTCCGCAATTAGAGGTTTTGAGACTGGGTGCTAATAATCTCAATGGTGTCATCCCATCCAAGCTCTTCAATAACTCCATGATTAGAGTAATATCGCTTACTTTAAATCAGCTCTCAGGTGGCCTCCCAGCAAACATAGGTTTTAACGTTCCAAACCTAGAATTCTTTTCTGTATCCTCCAATAACCTCGTGGCCGGGACACTCCCTAACTTCTCCAATGCTTCCAAGCTCAGGGCCCTAGACATGGACACAAACTCTTTTACCGGGTTTCTTCCCATCACGCTCTGTTCCTTGAAAAACCTTGAGCGTCTTGTCTTGTTCTGGAATCATTTGACGATTGATGCTTCTACTCTCTCTTGCTTGTTTAATCTTAGAAATTTGACACTACTAGACTTGGGAGGTAATCCATTAAACACCACGATTCCAGCTTTTCGTGGGAATCTCTCTACGCCACTCACATATTTTGATTTAAGCATTTCCAACATCAGGGGTAACATTCCCGTTGATATTGCCAACTTGAGCAGCTTGATAGAACTACATCTGGAAATCAATCAGTTGAGCGGAGCAATTCCAACTTCAATACAAAGGCTACAAAATCTCCTAGGTTTGTATTTGCACAATAACGAACTGGGAGGACATATCCCGTATGAACTCTGTCAACTAAACAACCTAGCCGAGTTAGGTTTGGGTCATAATCGGCTCTCTGGTTCTATTCCTTCCTGCTTGGGTGCGTTGGCAGTAGCTCTAAGAAATCTATCGTTAGAGTCCAATTTGTTAACTTCAAAAATACCATCTTCCTTGTGGGAACTCAAGTATGTACTGCACCTAAACTTGTCATCCAATTCTCTAGTTGGACCACTCTCAGAAGACATCGGAAAGTTGAAAGAAGTGGTGGATATAGATTTATCAAATAACCACTTCTCCGGAAACATTCCCGGTAGCATTGGTGGTCTTCAAAATATGATTAATTTGTCCTTGGCAAACAATTATTTACAAGGCCCTATTCCTAGTTCATTTAAAACCTTGCTAAGGCTAGAATTCTTGGATTTGTCCCAAAATAATCTATCTGGAGAGATCCCAAAGTCATTGGAAGCACTCTTGTATCTCAAGCATCTGAATTTGTCTTTCAACAAACTCCAAGGAGAAATTCCAACCGGCGGGCCTTTCTGA

Protein Analysis

755

Amino Acids

82.78

Weight (kDa)

6.94

Isoelectric Point (pI)

33.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 62 - 98 3.7e-06 Leucine rich repeat N-terminal domain
LRR_8 PF13855 271 - 331 8.3e-06 Leucine rich repeat
LRR_14 PF23598 310 - 545 4.2e-10 Leucine-rich repeat region
LRR_8 PF13855 320 - 379 5.7e-07 Leucine rich repeat
LRR_8 PF13855 540 - 599 9.2e-06 Leucine rich repeat
LRR_14 PF23598 614 - 744 2e-06 Leucine-rich repeat region
LRR_8 PF13855 688 - 744 5.4e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000229)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13780 FvH4_1g13790 FvH4_3g37750
malus_domestica MD00G1192800.v1.1 MD02G1291700.v1.1 MD03G1180500.v1.1 MD03G1181600.v1.1 MD03G1181700.v1.1 MD03G1181900.v1.1 MD03G1182700.v1.1 MD03G1281400.v1.1 MD05G1297800.v1.1 MD05G1298300.v1.1 MD07G1034800.v1.1 MD10G1265200.v1.1 MD10G1277500.v1.1
prunus_persica Prupe.4G063500_v2.0.a1 Prupe.6G160500_v2.0.a1
pyrus_communis pycom04g04980 pycom05g27570 pycom05g27590 pycom10g25090
rosa_chinensis RchiOBHm_Chr2g0113621 RchiOBHm_Chr2g0113671 RchiOBHm_Chr2g0113771 RchiOBHm_Chr2g0113871 RchiOBHm_Chr2g0114031 RchiOBHm_Chr2g0114181 RchiOBHm_Chr2g0114201 RchiOBHm_Chr2g0114231 RchiOBHm_Chr2g0114241 RchiOBHm_Chr4g0403181 RchiOBHm_Chr4g0404251 RchiOBHm_Chr4g0404291 RchiOBHm_Chr4g0404471 RchiOBHm_Chr5g0010961 RchiOBHm_Chr5g0010971 RchiOBHm_Chr5g0010981 RchiOBHm_Chr5g0011131 RchiOBHm_Chr5g0011311 RchiOBHm_Chr5g0011321 RchiOBHm_Chr5g0011361 RchiOBHm_Chr5g0016031 RchiOBHm_Chr5g0040141 RchiOBHm_Chr5g0040411 RchiOBHm_Chr5g0040471 RchiOBHm_Chr5g0059151 RchiOBHm_Chr5g0059191 RchiOBHm_Chr6g0251861 RchiOBHm_Chr7g0213311 RchiOBHm_Chr7g0213321
rosa_laevigata RLG00000009001 RLG00000009062 RLG00000018075 RLG00000018085 RLG00000018097 RLG00000031818 RLG00000034199
rosa_multiflora Rmu_co7972198.1_g000001 Rmu_co8328773.1_g000001 Rmu_sc0000929.1_g000033 Rmu_sc0001023.1_g000056 Rmu_sc0001699.1_g000007 Rmu_sc0003151.1_g000028 Rmu_sc0003242.1_g000010 Rmu_sc0004283.1_g000012 Rmu_sc0004283.1_g000036 Rmu_sc0004283.1_g000048 Rmu_sc0004283.1_g000066 Rmu_sc0005187.1_g000011 Rmu_sc0007010.1_g000008 Rmu_sc0007109.1_g000001 Rmu_sc0008397.1_g000007 Rmu_sc0009151.1_g000001 Rmu_sc0009639.1_g000020 Rmu_sc0009975.1_g000007 Rmu_sc0009975.1_g000010 Rmu_sc0010543.1_g000006 Rmu_sc0011398.1_g000001 Rmu_sc0011941.1_g000025 Rmu_sc0013141.1_g000002 Rmu_sc0016457.1_g000002 Rmu_sc0038501.1_g000001 Rmu_ssc0000303.1_g000008
rosa_roxburghii Rroxscaffold_1G00040180 Rroxscaffold_1G00040280 Rroxscaffold_1G00040900 Rroxscaffold_1G00064830 Rroxscaffold_1G00065410 Rroxscaffold_2G00130010 Rroxscaffold_2G00130040
rosa_rugosa Rorug02G0188500 Rorug02G0188800 Rorug02G0188900 Rorug02G0189500 Rorug04G0458400 Rorug05G0184800
rosa_samantha Rh1CG253300 Rh2CG247500 Rh2CG247600 Rh2CG247900 Rh2CG248300 Rh2CG249100 Rh2CG249400 Rh2CG249800 Rh2CG249900 Rh2CG250000 Rh2CG250100 Rh2CG250200 Rh2CG262700 Rh4AG118100 Rh4AG118300 Rh4AG364100 Rh4BG106900 Rh4CG125100 Rh4DG110100 Rh4DG110500 Rh4DG110600 Rh4DG369800 Rh5CG093500 Rh5CG093600 Rh5CG093700 Rh5CG095300 Rh5CG095500 Rh5CG096100 Rh5CG096200 Rh5CG096400 Rh5CG099600 Rh5CG134600 Rh5CG421300 Rh6DG142900 Rh7AG370200
rosa_wichuraiana Rw0G001470 Rw0G014660 Rw0G017510 Rw0G017750 Rw1G005500 Rw2G018440 Rw2G018460 Rw2G018490 Rw2G019150 Rw4G009550 Rw5G007590 Rw5G007860 Rw6G001510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 299
AccB7I CCANNNNNTGG 1 cut(s) 945
AccBSI CCGCTC 1 cut(s) 1656
AccIII TCCGGA 2 cut(s) 859, 2018
AciI CCGC 6 cut(s) 237, 362, 576, 1100, 1656, 2253
AclI AACGTT 1 cut(s) 1242
AclWI GGATC 1 cut(s) 2164
AcoI YGGCCR 1 cut(s) 1287
AcsI RAATTY 6 cut(s) 22, 1256, 1471, 2132, 2212, 2241
AcuI CTGAAG 1 cut(s) 386
AfaI GTAC 4 cut(s) 335, 548, 1072, 1914
AjuI GAANNNNNNNTTGG 2 cut(s) 2226, 2258
Alw21I GWGCWC 1 cut(s) 301
Alw26I GTCTC 1 cut(s) 1111
AlwI GGATC 1 cut(s) 2164
Aor13HI TCCGGA 2 cut(s) 859, 2018
AoxI GGCC 7 cut(s) 318, 397, 1216, 1287, 1329, 2092, 2255
ApaI GGGCCC 1 cut(s) 1333
ApeKI GCWGC 2 cut(s) 578, 1617
ApoI RAATTY 6 cut(s) 22, 1256, 1471, 2132, 2212, 2241
ArsI GACNNNNNNTTYG 4 cut(s) 74, 106, 686, 718
AseI ATTAAT 1 cut(s) 2061
Asp700I GAANNNNTTC 1 cut(s) 711
AspA2I CCTAGG 1 cut(s) 1696
AspLEI GCGC 1 cut(s) 199
AspS9I GGNCC 9 cut(s) 246, 397, 422, 516, 1329, 1330, 1949, 2093, 2255
AsuC2I CCSGG 3 cut(s) 1291, 1360, 2031
AsuHPI GGTGA 4 cut(s) 70, 209, 685, 1103
AsuII TTCGAA 1 cut(s) 705
AvaII GGWCC 4 cut(s) 246, 422, 516, 1949
AvrII CCTAGG 1 cut(s) 1696
BaeGI GKGCMC 1 cut(s) 1333
BaeI ACNNNNGTAYC 2 cut(s) 2180, 2213
BanII GRGCYC 1 cut(s) 1333
BarI GAAGNNNNNNTAC 2 cut(s) 668, 700
BauI CACGAG 1 cut(s) 1283
BbsI GAAGAC 2 cut(s) 1968, 2039
Bbv12I GWGCWC 1 cut(s) 301
BbvI GCAGC 2 cut(s) 565, 1629
BccI CCATC 4 cut(s) 545, 1159, 1379, 1894
BceAI ACGGC 1 cut(s) 333
BciVI GTATCC 1 cut(s) 1279
BcnI CCSGG 3 cut(s) 1291, 1360, 2031
BcoDI GTCTC 1 cut(s) 1111
BfaI CTAG 9 cut(s) 9, 1253, 1334, 1484, 1697, 1766, 1943, 2103, 2129
BfmI CTRYAG 1 cut(s) 147
BfuAI ACCTGC 1 cut(s) 299
BfuI GTATCC 1 cut(s) 1279
BisI GCNGC 2 cut(s) 579, 1618
BlnI CCTAGG 1 cut(s) 1696
BlsI GCNGC 2 cut(s) 580, 1619
Bme1390I CCNGG 3 cut(s) 1291, 1360, 2031
Bme18I GGWCC 4 cut(s) 246, 422, 516, 1949
BmgT120I GGNCC 9 cut(s) 246, 397, 422, 516, 1329, 1330, 1949, 2093, 2255
BmiI GGNNCC 5 cut(s) 424, 496, 517, 626, 1331
BmrFI CCNGG 3 cut(s) 1291, 1360, 2031
BmrI ACTGGG 3 cut(s) 286, 1130, 1733
BmsI GCATC 4 cut(s) 373, 886, 1426, 2215
BmuI ACTGGG 3 cut(s) 286, 1130, 1733
BpiI GAAGAC 2 cut(s) 1968, 2039
BpmI CTGGAG 2 cut(s) 764, 2184
Bpu10I CCTNAGC 2 cut(s) 1325, 2123
Bpu14I TTCGAA 1 cut(s) 705
BpuEI CTTGAG 5 cut(s) 194, 1418, 1633, 1889, 2186
BpuMI CCSGG 3 cut(s) 1291, 1360, 2031
BsaJI CCNNGG 4 cut(s) 994, 1696, 2070, 2233
BsaWI WCCGGW 3 cut(s) 859, 1078, 2018
BsaXI ACNNNNNCTCC 6 cut(s) 737, 767, 1677, 1707, 2000, 2030
Bse118I RCCGGY 2 cut(s) 453, 2249
Bse1I ACTGG 4 cut(s) 248, 281, 1125, 1728
Bse3DI GCAATG 1 cut(s) 956
BseAI TCCGGA 2 cut(s) 859, 2018
BseDI CCNNGG 4 cut(s) 994, 1696, 2070, 2233
BseGI GGATG 4 cut(s) 1087, 1146, 1151, 1931
BseMI GCAATG 1 cut(s) 956
BseMII CTCAG 3 cut(s) 1224, 1339, 1971
BseNI ACTGG 4 cut(s) 248, 281, 1125, 1728
BseRI GAGGAG 1 cut(s) 761
BseSI GKGCMC 1 cut(s) 1333
BseXI GCAGC 2 cut(s) 565, 1629
BseYI CCCAGC 1 cut(s) 1222
BsgI GTGCAG 3 cut(s) 582, 779, 1901
BshFI GGCC 7 cut(s) 320, 399, 1218, 1289, 1331, 2094, 2257
BsiHKAI GWGCWC 1 cut(s) 301
BsiSI CCGG 9 cut(s) 348, 454, 860, 1079, 1290, 1359, 2019, 2031, 2250
BslFI GGGAC 3 cut(s) 408, 1306, 2131
BsmAI GTCTC 1 cut(s) 1111
BsmFI GGGAC 3 cut(s) 408, 1306, 2131
BsnI GGCC 7 cut(s) 320, 399, 1218, 1289, 1331, 2094, 2257
Bsp119I TTCGAA 1 cut(s) 705
Bsp120I GGGCCC 1 cut(s) 1329
Bsp1286I GDGCHC 2 cut(s) 301, 1333
Bsp13I TCCGGA 2 cut(s) 859, 2018
Bsp143I GATC 3 cut(s) 187, 1093, 2169
BspACI CCGC 6 cut(s) 237, 362, 576, 1100, 1656, 2253
BspANI GGCC 7 cut(s) 320, 399, 1218, 1289, 1331, 2094, 2257
BspCNI CTCAG 3 cut(s) 1223, 1338, 1970
BspEI TCCGGA 2 cut(s) 859, 2018
BspLI GGNNCC 5 cut(s) 424, 496, 517, 626, 1331
BspMAI CTGCAG 1 cut(s) 151
BspMI ACCTGC 1 cut(s) 299
BspPI GGATC 1 cut(s) 2164
BspQI GCTCTTC 1 cut(s) 1166
BspT104I TTCGAA 1 cut(s) 705
BsrBI CCGCTC 1 cut(s) 1656
BsrDI GCAATG 1 cut(s) 956
BsrFI RCCGGY 2 cut(s) 453, 2249
BsrI ACTGG 4 cut(s) 248, 281, 1125, 1728
BssAI RCCGGY 2 cut(s) 453, 2249
BssECI CCNNGG 4 cut(s) 994, 1696, 2070, 2233
BssMI GATC 3 cut(s) 187, 1093, 2169
BssSI CACGAG 1 cut(s) 1283
BssT1I CCWWGG 3 cut(s) 1696, 2070, 2233
Bst2BI CACGAG 1 cut(s) 1283
Bst4CI ACNGT 2 cut(s) 926, 945
Bst6I CTCTTC 1 cut(s) 1166
BstBI TTCGAA 1 cut(s) 705
BstC8I GCNNGC 2 cut(s) 301, 2255
BstDEI CTNAG 6 cut(s) 1210, 1325, 1466, 1841, 1957, 2123
BstDSI CCRYGG 1 cut(s) 994
BstENI CCTNNNNNAGG 1 cut(s) 2122
BstF5I GGATG 4 cut(s) 1087, 1146, 1151, 1931
BstHHI GCGC 1 cut(s) 199
BstKTI GATC 3 cut(s) 190, 1096, 2172
BstMAI GTCTC 1 cut(s) 1111
BstMBI GATC 3 cut(s) 187, 1093, 2169
BstMWI GCNNNNNNNGC 4 cut(s) 203, 212, 291, 300
BstSCI CCNGG 3 cut(s) 1289, 1358, 2029
BstSFI CTRYAG 1 cut(s) 147
BstSLI GKGCMC 1 cut(s) 1333
BstV1I GCAGC 2 cut(s) 565, 1629
BstV2I GAAGAC 2 cut(s) 1968, 2039
BstX2I RGATCY 1 cut(s) 2169
BstYI RGATCY 1 cut(s) 2169
BsuI GTATCC 1 cut(s) 1279
BsuRI GGCC 7 cut(s) 320, 399, 1218, 1289, 1331, 2094, 2257
BtgI CCRYGG 1 cut(s) 994
BtsCI GGATG 4 cut(s) 1087, 1146, 1151, 1931
BveI ACCTGC 1 cut(s) 299
Cac8I GCNNGC 2 cut(s) 301, 2255
CfoI GCGC 1 cut(s) 199
Cfr10I RCCGGY 2 cut(s) 453, 2249
Cfr13I GGNCC 9 cut(s) 246, 397, 422, 516, 1329, 1330, 1949, 2093, 2255
CseI GACGC 1 cut(s) 1391
Csp6I GTAC 4 cut(s) 334, 547, 1071, 1913
CspCI CAANNNNNGTGG 4 cut(s) 829, 864, 976, 1011
CviAII CATG 5 cut(s) 337, 419, 844, 1174, 1339
CviQI GTAC 4 cut(s) 334, 547, 1071, 1913
DdeI CTNAG 6 cut(s) 1210, 1325, 1466, 1841, 1957, 2123
DpnI GATC 3 cut(s) 189, 1095, 2171
DpnII GATC 3 cut(s) 187, 1093, 2169
DraI TTTAAA 2 cut(s) 1200, 2113
EaeI YGGCCR 1 cut(s) 1287
Eam1104I CTCTTC 1 cut(s) 1166
EarI CTCTTC 1 cut(s) 1166
Eco130I CCWWGG 3 cut(s) 1696, 2070, 2233
Eco24I GRGCYC 1 cut(s) 1333
Eco47I GGWCC 4 cut(s) 246, 422, 516, 1949
Eco57I CTGAAG 1 cut(s) 386
EcoNI CCTNNNNNAGG 1 cut(s) 2122
EcoO109I RGGNCCY 4 cut(s) 516, 1329, 1330, 2093
EcoRI GAATTC 2 cut(s) 1256, 2132
EcoT14I CCWWGG 3 cut(s) 1696, 2070, 2233
EcoT38I GRGCYC 1 cut(s) 1333
ErhI CCWWGG 3 cut(s) 1696, 2070, 2233
FaeI CATG 5 cut(s) 340, 422, 847, 1177, 1342
FaqI GGGAC 3 cut(s) 408, 1306, 2131
FatI CATG 5 cut(s) 336, 418, 843, 1173, 1338
FauI CCCGC 2 cut(s) 583, 2246
Fnu4HI GCNGC 2 cut(s) 579, 1618
FokI GGATG 4 cut(s) 1094, 1133, 1138, 1918
FriOI GRGCYC 1 cut(s) 1333
Fsp4HI GCNGC 2 cut(s) 579, 1618
FspBI CTAG 9 cut(s) 9, 1253, 1334, 1484, 1697, 1766, 1943, 2103, 2129
GlaI GCGC 1 cut(s) 198
GluI GCNGC 2 cut(s) 579, 1618
GsaI CCCAGC 1 cut(s) 1226
GsuI CTGGAG 2 cut(s) 764, 2184
HaeIII GGCC 7 cut(s) 320, 399, 1218, 1289, 1331, 2094, 2257
HapII CCGG 9 cut(s) 348, 454, 860, 1079, 1290, 1359, 2019, 2031, 2250
HgaI GACGC 1 cut(s) 1391
HhaI GCGC 1 cut(s) 199
Hin1II CATG 5 cut(s) 340, 422, 847, 1177, 1342
Hin6I GCGC 1 cut(s) 197
HinP1I GCGC 1 cut(s) 197
HincII GTYRAC 2 cut(s) 1754, 1872
HindII GTYRAC 2 cut(s) 1754, 1872
HinfI GANTC 8 cut(s) 312, 907, 931, 980, 1420, 1516, 1534, 1859
HpaI GTTAAC 1 cut(s) 1872
HpaII CCGG 9 cut(s) 348, 454, 860, 1079, 1290, 1359, 2019, 2031, 2250
HphI GGTGA 4 cut(s) 70, 209, 685, 1103
Hpy166II GTNNAC 2 cut(s) 1754, 1872
Hpy188I TCNGA 8 cut(s) 405, 717, 835, 930, 1960, 1970, 2211, 2264
Hpy188III TCNNGA 6 cut(s) 232, 860, 1417, 1637, 2019, 2163
Hpy8I GTNNAC 2 cut(s) 1754, 1872
HpyAV CCTTC 4 cut(s) 410, 454, 670, 1821
HpyCH4III ACNGT 2 cut(s) 926, 945
HpyCH4IV ACGT 1 cut(s) 1242
HpyCH4V TGCA 8 cut(s) 149, 273, 599, 760, 954, 974, 1711, 1918
HpyF10VI GCNNNNNNNGC 4 cut(s) 203, 212, 291, 300
HpyF3I CTNAG 6 cut(s) 1210, 1325, 1466, 1841, 1957, 2123
HpySE526I ACGT 1 cut(s) 1242
Hsp92II CATG 5 cut(s) 340, 422, 847, 1177, 1342
HspAI GCGC 1 cut(s) 197
Kpn2I TCCGGA 2 cut(s) 859, 2018
KspAI GTTAAC 1 cut(s) 1872
Kzo9I GATC 3 cut(s) 187, 1093, 2169
LguI GCTCTTC 1 cut(s) 1166
LmnI GCTCC 3 cut(s) 152, 999, 1658
Lsp1109I GCAGC 2 cut(s) 565, 1629
LweI GCATC 4 cut(s) 373, 886, 1426, 2215
MaeI CTAG 9 cut(s) 9, 1253, 1334, 1484, 1697, 1766, 1943, 2103, 2129
MaeII ACGT 1 cut(s) 1242
MaeIII GTNAC 3 cut(s) 286, 313, 1586
MalI GATC 3 cut(s) 189, 1095, 2171
MbiI CCGCTC 1 cut(s) 1656
MboI GATC 3 cut(s) 187, 1093, 2169
MflI RGATCY 1 cut(s) 2169
MhlI GDGCHC 2 cut(s) 301, 1333
MlyI GAGTC 3 cut(s) 321, 989, 1868
MmeI TCCRAC 4 cut(s) 288, 1599, 1691, 1927
MroI TCCGGA 2 cut(s) 859, 2018
MroXI GAANNNNTTC 1 cut(s) 711
MspA1I CMGCKG 2 cut(s) 578, 742
MspI CCGG 9 cut(s) 348, 454, 860, 1079, 1290, 1359, 2019, 2031, 2250
MspR9I CCNGG 3 cut(s) 1291, 1360, 2031
MwoI GCNNNNNNNGC 4 cut(s) 203, 212, 291, 300
NciI CCSGG 3 cut(s) 1291, 1360, 2031
NdeII GATC 3 cut(s) 187, 1093, 2169
NlaIII CATG 5 cut(s) 340, 422, 847, 1177, 1342
NlaIV GGNNCC 5 cut(s) 424, 496, 517, 626, 1331
NmeAIII GCCGAG 1 cut(s) 1795
NmuCI GTSAC 1 cut(s) 313
NspV TTCGAA 1 cut(s) 705
PciSI GCTCTTC 1 cut(s) 1166
PdmI GAANNNNTTC 1 cut(s) 711
PfeI GAWTC 5 cut(s) 907, 931, 1420, 1516, 1534
PflMI CCANNNNNTGG 1 cut(s) 945
PkrI GCNGC 2 cut(s) 580, 1619
PleI GAGTC 3 cut(s) 320, 988, 1867
PpsI GAGTC 3 cut(s) 320, 988, 1867
PpuMI RGGWCCY 1 cut(s) 516
PshBI ATTAAT 1 cut(s) 2061
Psp1406I AACGTT 1 cut(s) 1242
Psp5II RGGWCCY 1 cut(s) 516
PspFI CCCAGC 1 cut(s) 1222
PspN4I GGNNCC 5 cut(s) 424, 496, 517, 626, 1331
PspOMI GGGCCC 1 cut(s) 1329
PspPI GGNCC 9 cut(s) 246, 397, 422, 516, 1329, 1330, 1949, 2093, 2255
PspPPI RGGWCCY 1 cut(s) 516
PstI CTGCAG 1 cut(s) 151
PsuI RGATCY 1 cut(s) 2169
PvuII CAGCTG 1 cut(s) 742
RsaI GTAC 4 cut(s) 335, 548, 1072, 1914
RsaNI GTAC 4 cut(s) 334, 547, 1071, 1913
SapI GCTCTTC 1 cut(s) 1166
SatI GCNGC 2 cut(s) 579, 1618
Sau3AI GATC 3 cut(s) 187, 1093, 2169
Sau96I GGNCC 9 cut(s) 246, 397, 422, 516, 1329, 1330, 1949, 2093, 2255
SchI GAGTC 3 cut(s) 321, 989, 1868
ScrFI CCNGG 3 cut(s) 1291, 1360, 2031
SduI GDGCHC 2 cut(s) 301, 1333
SfaNI GCATC 4 cut(s) 373, 886, 1426, 2215
SfcI CTRYAG 1 cut(s) 147
SfuI TTCGAA 1 cut(s) 705
SinI GGWCC 4 cut(s) 246, 422, 516, 1949
SmlI CTYRAG 5 cut(s) 209, 1397, 1612, 1904, 2201
SmoI CTYRAG 5 cut(s) 209, 1397, 1612, 1904, 2201
SsiI CCGC 6 cut(s) 237, 362, 576, 1100, 1656, 2253
SspMI CTAG 9 cut(s) 9, 1253, 1334, 1484, 1697, 1766, 1943, 2103, 2129
StyD4I CCNGG 3 cut(s) 1289, 1358, 2029
StyI CCWWGG 3 cut(s) 1696, 2070, 2233
TaaI ACNGT 2 cut(s) 926, 945
TaiI ACGT 1 cut(s) 1245
TaqI TCGA 5 cut(s) 16, 92, 603, 705, 884
TatI WGTACW 1 cut(s) 1912
TfiI GAWTC 5 cut(s) 907, 931, 1420, 1516, 1534
TseFI GTSAC 1 cut(s) 313
TseI GCWGC 2 cut(s) 578, 1617
Tsp45I GTSAC 1 cut(s) 313
TspDTI ATGAA 4 cut(s) 407, 559, 1758, 2097
TspGWI ACGGA 1 cut(s) 983
Van91I CCANNNNNTGG 1 cut(s) 945
VpaK11BI GGWCC 4 cut(s) 246, 422, 516, 1949
VspI ATTAAT 1 cut(s) 2061
XagI CCTNNNNNAGG 1 cut(s) 2122
XapI RAATTY 6 cut(s) 22, 1256, 1471, 2132, 2212, 2241
XcmI CCANNNNNNNNNTGG 2 cut(s) 1282, 1893
XmaJI CCTAGG 1 cut(s) 1696
XmnI GAANNNNTTC 1 cut(s) 711
XspI CTAG 9 cut(s) 9, 1253, 1334, 1484, 1697, 1766, 1943, 2103, 2129
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.