RchiOBHm_Chr2g0113671

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000229
Physical Location & Seq
Reverse (-)
25819996 .. 25824644
4649 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48701

Sequence Viewer

Length: 1770 bp
ATGAAGACTATATTTATATATATATATATATATATATATCCCGATCACAGGCGGACGTCGACGCAGCAGGCGGTTCCAGGCTGCGATGGAGGCACTGGGCTGGCCGGAGGCGTCCCAGACCTCTTCTGGGCAGCAATCGAGGTCGAAGGAGGTCAGGGTTGCTGGTTTCTGGGCAACCACCTCACCTGCAACTGCAGGTTTTGTGCAGAACTGCAGAATGGTCGCCGGCGACTCCACCCGACCGCAAACCGGCTTCACAGACCCCCGCCGTCCATTCAGCAAGCCGCGCCGCACCGCGCCGTCGACGCTCGATCGAGGCCGGAGGAGCTACGTCAGCACTTTTTCTGGGTTGCGGACACCTATAACGTCTCTGAATTAGTAGCGTGTGCATATATATTGAACTATCTCCAGCTAGTTCCTCTTGTAACTCTCCTTAGTGAACAATTCCACACACTTTGCATATCCATTATTCAAACAATGGAGAGAGTTACTTGGTTCTTTCTTGAATACTTAATATGTTATACGGTGGCTAGCTGCTTAACTATGGCAGCACAAACCAAGCTTAACATCACCACAGACCGGTCTGCTCTTCTTGCTCTCAAAGCCCGTATTACCAGTGACCCTCAAAACATGATCTTCACCAACTGGTCAACCTCTACTCCTATTTGTAACTGGGTTGGGGTCACTTGTGGTGCACGCCATCATCGAATTGCAGAATTGAACCTCTCTTACTTTGGTCACACAGGCACCATTCCTCCGGAATTAGGAAACTTACCATTTCTTATTAATATGGACTTCAGCAATAACAGTTTCCATGGTATATTGCCTCATGAATTGGCCCGCTTGCGTCGGTTGAAGTTTATCAGCTTGGGAAACAACAAGTTCATGGGAGTCATTCCGTCATGCACGAAGTATATCATATATCTTATATTAGCTGGAATGTGTATTGATTTTTCAGAAATTCCAAATGAGATCGGCACTTTGAATCATCTGGAAAAATTGTATGTGCAACAGAATGCCTTAAAAGGGCCTATCCCTATGACTATCTTCAACATGTCATCTTTGACTATTGTAACTTTCTATGGTAACAATTTGAATGGTAGAATTCCTGACAATATTTGTCAAAATCTTCCGAATATTCAAGCGTTGAATTTGGGTGCCAATCAATTTAATGGTCCAATTCCTTCCATATTTGGGCAATGCAAACAACTTCTTTCTTTAAACTTGGAGCTTAACTGGTTGACAGGTCCTATACCATATGAGATTGGTTATCTTCCTAATTTAGAGATATTGTCGCTCGCTCAAAATAATATAAATGGCCATATCCCATCCTCAATCTTCAATATCTCCACAATAAAAGTATTAGATCTCGGCCTCAACCACCTTTCAAGTAGCCTCCCAGCAAACATAGGCCTTGGGCTTCCAAACCTACAATGGTTTTCAGTAGGAGGGAATCACCTCAGTGGAGTAATCCCCAAATCCATCTCCAATGCTTCTGAGATTCGGAGTCTAGACCTGGGTGAGAACTCTTTTTCTGGATTTATTCCAAGCACTCTGTGCCTCTTGACAAATCTTGAATGGCTCACATTGGCCTTCAATAATTTGACCATTGATGCCTCTACTCGAGAAGTTAATATTTTTTCTTGTCTGCCAAATCTTAGAAATTTGAGATATTTAGACTTCGGAAGCAATCCATTAAATGCCGAGCTTTCGATTTCCTTCAGTAATTTCTCTGCATCACTATTTGGTCGTCCCTGTACTGCCAATTAA

Protein Analysis

589

Amino Acids

65.51

Weight (kDa)

7.21

Isoelectric Point (pI)

40.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 192 - 230 2.4e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 308 - 388 7.4e-06 Leucine-rich repeat region
LRR_14 PF23598 421 - 564 8.7e-08 Leucine-rich repeat region
LRR_8 PF13855 475 - 535 4.7e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000229)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13780 FvH4_1g13790 FvH4_3g37750
malus_domestica MD00G1192800.v1.1 MD02G1291700.v1.1 MD03G1180500.v1.1 MD03G1181600.v1.1 MD03G1181700.v1.1 MD03G1181900.v1.1 MD03G1182700.v1.1 MD03G1281400.v1.1 MD05G1297800.v1.1 MD05G1298300.v1.1 MD07G1034800.v1.1 MD10G1265200.v1.1 MD10G1277500.v1.1
prunus_persica Prupe.4G063500_v2.0.a1 Prupe.6G160500_v2.0.a1
pyrus_communis pycom04g04980 pycom05g27570 pycom05g27590 pycom10g25090
rosa_chinensis RchiOBHm_Chr2g0113621 RchiOBHm_Chr2g0113671 RchiOBHm_Chr2g0113771 RchiOBHm_Chr2g0113871 RchiOBHm_Chr2g0114031 RchiOBHm_Chr2g0114181 RchiOBHm_Chr2g0114201 RchiOBHm_Chr2g0114231 RchiOBHm_Chr2g0114241 RchiOBHm_Chr4g0403181 RchiOBHm_Chr4g0404251 RchiOBHm_Chr4g0404291 RchiOBHm_Chr4g0404471 RchiOBHm_Chr5g0010961 RchiOBHm_Chr5g0010971 RchiOBHm_Chr5g0010981 RchiOBHm_Chr5g0011131 RchiOBHm_Chr5g0011311 RchiOBHm_Chr5g0011321 RchiOBHm_Chr5g0011361 RchiOBHm_Chr5g0016031 RchiOBHm_Chr5g0040141 RchiOBHm_Chr5g0040411 RchiOBHm_Chr5g0040471 RchiOBHm_Chr5g0059151 RchiOBHm_Chr5g0059191 RchiOBHm_Chr6g0251861 RchiOBHm_Chr7g0213311 RchiOBHm_Chr7g0213321
rosa_laevigata RLG00000009001 RLG00000009062 RLG00000018075 RLG00000018085 RLG00000018097 RLG00000031818 RLG00000034199
rosa_multiflora Rmu_co7972198.1_g000001 Rmu_co8328773.1_g000001 Rmu_sc0000929.1_g000033 Rmu_sc0001023.1_g000056 Rmu_sc0001699.1_g000007 Rmu_sc0003151.1_g000028 Rmu_sc0003242.1_g000010 Rmu_sc0004283.1_g000012 Rmu_sc0004283.1_g000036 Rmu_sc0004283.1_g000048 Rmu_sc0004283.1_g000066 Rmu_sc0005187.1_g000011 Rmu_sc0007010.1_g000008 Rmu_sc0007109.1_g000001 Rmu_sc0008397.1_g000007 Rmu_sc0009151.1_g000001 Rmu_sc0009639.1_g000020 Rmu_sc0009975.1_g000007 Rmu_sc0009975.1_g000010 Rmu_sc0010543.1_g000006 Rmu_sc0011398.1_g000001 Rmu_sc0011941.1_g000025 Rmu_sc0013141.1_g000002 Rmu_sc0016457.1_g000002 Rmu_sc0038501.1_g000001 Rmu_ssc0000303.1_g000008
rosa_roxburghii Rroxscaffold_1G00040180 Rroxscaffold_1G00040280 Rroxscaffold_1G00040900 Rroxscaffold_1G00064830 Rroxscaffold_1G00065410 Rroxscaffold_2G00130010 Rroxscaffold_2G00130040
rosa_rugosa Rorug02G0188500 Rorug02G0188800 Rorug02G0188900 Rorug02G0189500 Rorug04G0458400 Rorug05G0184800
rosa_samantha Rh1CG253300 Rh2CG247500 Rh2CG247600 Rh2CG247900 Rh2CG248300 Rh2CG249100 Rh2CG249400 Rh2CG249800 Rh2CG249900 Rh2CG250000 Rh2CG250100 Rh2CG250200 Rh2CG262700 Rh4AG118100 Rh4AG118300 Rh4AG364100 Rh4BG106900 Rh4CG125100 Rh4DG110100 Rh4DG110500 Rh4DG110600 Rh4DG369800 Rh5CG093500 Rh5CG093600 Rh5CG093700 Rh5CG095300 Rh5CG095500 Rh5CG096100 Rh5CG096200 Rh5CG096400 Rh5CG099600 Rh5CG134600 Rh5CG421300 Rh6DG142900 Rh7AG370200
rosa_wichuraiana Rw0G001470 Rw0G014660 Rw0G017510 Rw0G017750 Rw1G005500 Rw2G018440 Rw2G018460 Rw2G018490 Rw2G019150 Rw4G009550 Rw5G007590 Rw5G007860 Rw6G001510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 194
AatII GACGTC 1 cut(s) 59
Acc36I ACCTGC 2 cut(s) 186, 194
AccB1I GGYRCC 2 cut(s) 746, 1157
AccI GTMKAC 2 cut(s) 59, 303
AccII CGCG 2 cut(s) 287, 297
AccIII TCCGGA 1 cut(s) 757
AciI CCGC 9 cut(s) 52, 71, 243, 266, 285, 290, 295, 353, 841
AcoI YGGCCR 2 cut(s) 102, 1318
AcsI RAATTY 4 cut(s) 960, 1104, 1150, 1663
AcuI CTGAAG 2 cut(s) 781, 1705
AcyI GRCGYC 2 cut(s) 56, 111
AdeI CACNNNGTG 1 cut(s) 1557
AfaI GTAC 1 cut(s) 1759
AfiI CCNNNNNNNGG 7 cut(s) 48, 127, 249, 579, 764, 1026, 1194
AflIII ACRYGT 1 cut(s) 1053
AgeI ACCGGT 1 cut(s) 579
AjnI CCWGG 2 cut(s) 76, 1515
AleI CACNNNNGTG 1 cut(s) 1461
AluBI AGCT 8 cut(s) 328, 412, 534, 562, 867, 935, 1231, 1708
AluI AGCT 8 cut(s) 328, 412, 534, 562, 867, 935, 1231, 1708
Alw21I GWGCWC 1 cut(s) 697
Alw26I GTCTC 1 cut(s) 373
Alw44I GTGCAC 1 cut(s) 693
Ama87I CYCGRG 1 cut(s) 1623
Aor13HI TCCGGA 1 cut(s) 757
AoxI GGCC 8 cut(s) 102, 317, 837, 1028, 1318, 1372, 1411, 1590
ApaLI GTGCAC 1 cut(s) 693
ApeKI GCWGC 5 cut(s) 64, 81, 131, 534, 548
ApoI RAATTY 4 cut(s) 960, 1104, 1150, 1663
AseI ATTAAT 1 cut(s) 786
AsiGI ACCGGT 1 cut(s) 579
AspLEI GCGC 2 cut(s) 289, 299
AspS9I GGNCC 4 cut(s) 838, 1028, 1175, 1247
AsuHPI GGTGA 5 cut(s) 175, 562, 631, 1448, 1532
AsuNHI GCTAGC 1 cut(s) 530
AvaI CYCGRG 1 cut(s) 1623
AvaII GGWCC 2 cut(s) 1175, 1247
BaeGI GKGCMC 1 cut(s) 697
BalI TGGCCA 1 cut(s) 1320
BanI GGYRCC 2 cut(s) 746, 1157
BbsI GAAGAC 1 cut(s) 11
Bbv12I GWGCWC 1 cut(s) 697
BbvI GCAGC 5 cut(s) 68, 76, 143, 521, 560
BccI CCATC 4 cut(s) 80, 708, 1336, 1490
BceAI ACGGC 2 cut(s) 253, 284
BcgI CGANNNNNNTGC 2 cut(s) 203, 237
BciT130I CCWGG 2 cut(s) 78, 1517
BcoDI GTCTC 1 cut(s) 373
BfaI CTAG 3 cut(s) 413, 531, 1511
BfmI CTRYAG 2 cut(s) 193, 212
BfuAI ACCTGC 2 cut(s) 186, 194
BglII AGATCT 1 cut(s) 1366
BisI GCNGC 7 cut(s) 65, 82, 132, 285, 290, 535, 549
BlsI GCNGC 7 cut(s) 66, 83, 133, 286, 291, 536, 550
Bme1390I CCNGG 2 cut(s) 78, 1517
Bme18I GGWCC 2 cut(s) 1175, 1247
BmeT110I CYCGRG 1 cut(s) 1623
BmgT120I GGNCC 4 cut(s) 838, 1028, 1175, 1247
BmiI GGNNCC 3 cut(s) 75, 748, 1159
BmrFI CCNGG 2 cut(s) 78, 1517
BmrI ACTGGG 2 cut(s) 105, 682
BmsI GCATC 2 cut(s) 1603, 1745
BmtI GCTAGC 1 cut(s) 534
BmuI ACTGGG 2 cut(s) 105, 682
BpiI GAAGAC 1 cut(s) 11
BpmI CTGGAG 1 cut(s) 392
BsaHI GRCGYC 2 cut(s) 56, 111
BsaJI CCNNGG 3 cut(s) 814, 1414, 1516
BsaWI WCCGGW 2 cut(s) 579, 757
BsaXI ACNNNNNCTCC 4 cut(s) 643, 673, 739, 769
Bsc4I CCNNNNNNNGG 7 cut(s) 48, 127, 249, 579, 764, 1026, 1194
Bse118I RCCGGY 3 cut(s) 225, 249, 579
Bse1I ACTGG 5 cut(s) 100, 615, 650, 677, 1241
Bse3DI GCAATG 1 cut(s) 1205
BseAI TCCGGA 1 cut(s) 757
BseBI CCWGG 2 cut(s) 78, 1517
BseDI CCNNGG 3 cut(s) 814, 1414, 1516
BseGI GGATG 1 cut(s) 1328
BseLI CCNNNNNNNGG 7 cut(s) 48, 127, 249, 579, 764, 1026, 1194
BseMI GCAATG 1 cut(s) 1205
BseMII CTCAG 2 cut(s) 1474, 1488
BseNI ACTGG 5 cut(s) 100, 615, 650, 677, 1241
BseRI GAGGAG 1 cut(s) 338
BseSI GKGCMC 1 cut(s) 697
BseXI GCAGC 5 cut(s) 68, 76, 143, 521, 560
BseYI CCCAGC 1 cut(s) 1399
BsgI GTGCAG 1 cut(s) 225
Bsh1236I CGCG 2 cut(s) 287, 297
Bsh1285I CGRYCG 2 cut(s) 243, 314
BshFI GGCC 8 cut(s) 104, 319, 839, 1030, 1320, 1374, 1413, 1592
BshNI GGYRCC 2 cut(s) 746, 1157
BshTI ACCGGT 1 cut(s) 579
BsiEI CGRYCG 2 cut(s) 243, 314
BsiHKAI GWGCWC 1 cut(s) 697
BsiHKCI CYCGRG 1 cut(s) 1623
BsiSI CCGG 6 cut(s) 105, 226, 250, 320, 580, 758
BslFI GGGAC 2 cut(s) 98, 1737
BslI CCNNNNNNNGG 7 cut(s) 48, 127, 249, 579, 764, 1026, 1194
BsmAI GTCTC 1 cut(s) 373
BsmBI CGTCTC 1 cut(s) 373
BsmFI GGGAC 2 cut(s) 98, 1737
BsmI GAATGC 1 cut(s) 1021
BsnI GGCC 8 cut(s) 104, 319, 839, 1030, 1320, 1374, 1413, 1592
BsoBI CYCGRG 1 cut(s) 1623
Bsp1286I GDGCHC 1 cut(s) 697
Bsp13I TCCGGA 1 cut(s) 757
Bsp143I GATC 5 cut(s) 43, 311, 633, 972, 1366
Bsp19I CCATGG 1 cut(s) 814
BspACI CCGC 9 cut(s) 52, 71, 243, 266, 285, 290, 295, 353, 841
BspANI GGCC 8 cut(s) 104, 319, 839, 1030, 1320, 1374, 1413, 1592
BspCNI CTCAG 2 cut(s) 1473, 1489
BspEI TCCGGA 1 cut(s) 757
BspFNI CGCG 2 cut(s) 287, 297
BspHI TCATGA 1 cut(s) 829
BspLI GGNNCC 3 cut(s) 75, 748, 1159
BspMAI CTGCAG 2 cut(s) 197, 216
BspMI ACCTGC 2 cut(s) 186, 194
BspOI GCTAGC 1 cut(s) 534
BspQI GCTCTTC 1 cut(s) 594
BspT107I GGYRCC 2 cut(s) 746, 1157
BsrDI GCAATG 1 cut(s) 1205
BsrFI RCCGGY 3 cut(s) 225, 249, 579
BsrI ACTGG 5 cut(s) 100, 615, 650, 677, 1241
BssAI RCCGGY 3 cut(s) 225, 249, 579
BssECI CCNNGG 3 cut(s) 814, 1414, 1516
BssMI GATC 5 cut(s) 43, 311, 633, 972, 1366
BssNI GRCGYC 2 cut(s) 56, 111
BssT1I CCWWGG 2 cut(s) 814, 1414
Bst2UI CCWGG 2 cut(s) 78, 1517
Bst4CI ACNGT 2 cut(s) 526, 809
Bst6I CTCTTC 2 cut(s) 128, 594
BstACI GRCGYC 2 cut(s) 56, 111
BstAPI GCANNNNNTGC 1 cut(s) 1557
BstC8I GCNNGC 9 cut(s) 69, 102, 227, 282, 532, 697, 841, 845, 1299
BstDEI CTNAG 4 cut(s) 434, 1460, 1497, 1658
BstDSI CCRYGG 1 cut(s) 814
BstF5I GGATG 1 cut(s) 1328
BstFNI CGCG 2 cut(s) 287, 297
BstHHI GCGC 2 cut(s) 289, 299
BstKTI GATC 5 cut(s) 46, 314, 636, 975, 1369
BstMAI GTCTC 1 cut(s) 373
BstMBI GATC 5 cut(s) 43, 311, 633, 972, 1366
BstMCI CGRYCG 2 cut(s) 243, 314
BstMWI GCNNNNNNNGC 8 cut(s) 90, 286, 305, 325, 334, 593, 602, 1557
BstNI CCWGG 2 cut(s) 78, 1517
BstNSI RCATGY 1 cut(s) 1057
BstSCI CCNGG 2 cut(s) 76, 1515
BstSFI CTRYAG 2 cut(s) 193, 212
BstSLI GKGCMC 1 cut(s) 697
BstUI CGCG 2 cut(s) 287, 297
BstV1I GCAGC 5 cut(s) 68, 76, 143, 521, 560
BstV2I GAAGAC 1 cut(s) 11
BstX2I RGATCY 1 cut(s) 1366
BstYI RGATCY 1 cut(s) 1366
BsuRI GGCC 8 cut(s) 104, 319, 839, 1030, 1320, 1374, 1413, 1592
BtgI CCRYGG 1 cut(s) 814
BtgZI GCGATG 1 cut(s) 99
BtsCI GGATG 1 cut(s) 1328
BtsIMutI CAGTG 3 cut(s) 93, 622, 1468
BveI ACCTGC 2 cut(s) 186, 194
Cac8I GCNNGC 9 cut(s) 69, 102, 227, 282, 532, 697, 841, 845, 1299
CciI TCATGA 1 cut(s) 829
CfoI GCGC 2 cut(s) 289, 299
Cfr10I RCCGGY 3 cut(s) 225, 249, 579
Cfr13I GGNCC 4 cut(s) 838, 1028, 1175, 1247
CseI GACGC 4 cut(s) 70, 100, 314, 836
Csp6I GTAC 1 cut(s) 1758
CspAI ACCGGT 1 cut(s) 579
CspCI CAANNNNNGTGG 2 cut(s) 437, 472
CviAII CATG 6 cut(s) 631, 815, 830, 886, 903, 1054
CviQI GTAC 1 cut(s) 1758
DdeI CTNAG 4 cut(s) 434, 1460, 1497, 1658
DpnI GATC 5 cut(s) 45, 313, 635, 974, 1368
DpnII GATC 5 cut(s) 43, 311, 633, 972, 1366
DraI TTTAAA 1 cut(s) 1221
DraIII CACNNNGTG 1 cut(s) 1557
EaeI YGGCCR 2 cut(s) 102, 1318
Eam1104I CTCTTC 2 cut(s) 128, 594
EarI CTCTTC 2 cut(s) 128, 594
EciI GGCGGA 1 cut(s) 67
Eco130I CCWWGG 2 cut(s) 814, 1414
Eco147I AGGCCT 1 cut(s) 1413
Eco47I GGWCC 2 cut(s) 1175, 1247
Eco57I CTGAAG 2 cut(s) 781, 1705
Eco88I CYCGRG 1 cut(s) 1623
EcoO109I RGGNCCY 2 cut(s) 1028, 1247
EcoRI GAATTC 1 cut(s) 1104
EcoRII CCWGG 2 cut(s) 76, 1515
EcoT14I CCWWGG 2 cut(s) 814, 1414
ErhI CCWWGG 2 cut(s) 814, 1414
Esp3I CGTCTC 1 cut(s) 373
FaeI CATG 6 cut(s) 634, 818, 833, 889, 906, 1057
FaqI GGGAC 2 cut(s) 98, 1737
FatI CATG 6 cut(s) 630, 814, 829, 885, 902, 1053
FauI CCCGC 2 cut(s) 273, 848
FauNDI CATATG 1 cut(s) 1258
FblI GTMKAC 2 cut(s) 59, 303
Fnu4HI GCNGC 7 cut(s) 65, 82, 132, 285, 290, 535, 549
FokI GGATG 1 cut(s) 1315
Fsp4HI GCNGC 7 cut(s) 65, 82, 132, 285, 290, 535, 549
FspBI CTAG 3 cut(s) 413, 531, 1511
GlaI GCGC 2 cut(s) 288, 298
GluI GCNGC 7 cut(s) 65, 82, 132, 285, 290, 535, 549
GsaI CCCAGC 1 cut(s) 1403
GsuI CTGGAG 1 cut(s) 392
HaeIII GGCC 8 cut(s) 104, 319, 839, 1030, 1320, 1374, 1413, 1592
HapII CCGG 6 cut(s) 105, 226, 250, 320, 580, 758
HgaI GACGC 4 cut(s) 70, 100, 314, 836
HhaI GCGC 2 cut(s) 289, 299
Hin1I GRCGYC 2 cut(s) 56, 111
Hin1II CATG 6 cut(s) 634, 818, 833, 889, 906, 1057
Hin6I GCGC 2 cut(s) 287, 297
HinP1I GCGC 2 cut(s) 287, 297
HincII GTYRAC 4 cut(s) 60, 304, 651, 1242
HindII GTYRAC 4 cut(s) 60, 304, 651, 1242
HindIII AAGCTT 1 cut(s) 560
HinfI GANTC 6 cut(s) 231, 891, 985, 1453, 1501, 1507
HpaII CCGG 6 cut(s) 105, 226, 250, 320, 580, 758
HphI GGTGA 5 cut(s) 175, 562, 631, 1448, 1532
Hpy166II GTNNAC 6 cut(s) 60, 304, 440, 651, 695, 1242
Hpy188I TCNGA 6 cut(s) 373, 958, 1134, 1498, 1506, 1685
Hpy8I GTNNAC 6 cut(s) 60, 304, 440, 651, 695, 1242
Hpy99I CGWCG 5 cut(s) 61, 64, 305, 308, 852
HpyAV CCTTC 4 cut(s) 140, 1194, 1603, 1729
HpyCH4III ACNGT 2 cut(s) 526, 809
HpyCH4IV ACGT 3 cut(s) 56, 331, 366
HpyF10VI GCNNNNNNNGC 8 cut(s) 90, 286, 305, 325, 334, 593, 602, 1557
HpyF3I CTNAG 4 cut(s) 434, 1460, 1497, 1658
HpySE526I ACGT 3 cut(s) 56, 331, 366
Hsp92I GRCGYC 2 cut(s) 56, 111
Hsp92II CATG 6 cut(s) 634, 818, 833, 889, 906, 1057
HspAI GCGC 2 cut(s) 287, 297
Kpn2I TCCGGA 1 cut(s) 757
KroI GCCGGC 1 cut(s) 225
KroNI GCCGGC 1 cut(s) 227
Kzo9I GATC 5 cut(s) 43, 311, 633, 972, 1366
LguI GCTCTTC 1 cut(s) 594
LmnI GCTCC 2 cut(s) 325, 1228
Lsp1109I GCAGC 5 cut(s) 68, 76, 143, 521, 560
LweI GCATC 2 cut(s) 1603, 1745
MaeI CTAG 3 cut(s) 413, 531, 1511
MaeII ACGT 3 cut(s) 56, 331, 366
MaeIII GTNAC 8 cut(s) 424, 487, 617, 668, 682, 737, 1072, 1085
MalI GATC 5 cut(s) 45, 313, 635, 974, 1368
MboI GATC 5 cut(s) 43, 311, 633, 972, 1366
MboII GAAGA 8 cut(s) 16, 115, 581, 628, 1039, 1121, 1265, 1330
MflI RGATCY 1 cut(s) 1366
MhlI GDGCHC 1 cut(s) 697
MlsI TGGCCA 1 cut(s) 1320
MluNI TGGCCA 1 cut(s) 1320
MlyI GAGTC 3 cut(s) 225, 900, 1516
Mox20I TGGCCA 1 cut(s) 1320
MreI CGCCGGCG 1 cut(s) 225
MroI TCCGGA 1 cut(s) 757
MroNI GCCGGC 1 cut(s) 225
MscI TGGCCA 1 cut(s) 1320
MslI CAYNNNNRTG 1 cut(s) 1461
Msp20I TGGCCA 1 cut(s) 1320
MspI CCGG 6 cut(s) 105, 226, 250, 320, 580, 758
MspR9I CCNGG 2 cut(s) 78, 1517
Mva1269I GAATGC 1 cut(s) 1021
MvaI CCWGG 2 cut(s) 78, 1517
MvnI CGCG 2 cut(s) 287, 297
MwoI GCNNNNNNNGC 8 cut(s) 90, 286, 305, 325, 334, 593, 602, 1557
NaeI GCCGGC 1 cut(s) 227
NcoI CCATGG 1 cut(s) 814
NdeI CATATG 1 cut(s) 1258
NdeII GATC 5 cut(s) 43, 311, 633, 972, 1366
NgoMIV GCCGGC 1 cut(s) 225
NheI GCTAGC 1 cut(s) 530
NlaIII CATG 6 cut(s) 634, 818, 833, 889, 906, 1057
NlaIV GGNNCC 3 cut(s) 75, 748, 1159
NmeAIII GCCGAG 2 cut(s) 1350, 1729
NmuCI GTSAC 3 cut(s) 617, 682, 737
NspI RCATGY 1 cut(s) 1057
OliI CACNNNNGTG 1 cut(s) 1461
PaeR7I CTCGAG 1 cut(s) 1623
PagI TCATGA 1 cut(s) 829
PaqCI CACCTGC 1 cut(s) 194
PceI AGGCCT 1 cut(s) 1413
PciI ACATGT 1 cut(s) 1053
PciSI GCTCTTC 1 cut(s) 594
PcsI WCGNNNNNNNCGW 1 cut(s) 703
PctI GAATGC 1 cut(s) 1021
PdiI GCCGGC 1 cut(s) 227
PfeI GAWTC 3 cut(s) 985, 1453, 1501
PinAI ACCGGT 1 cut(s) 579
PkrI GCNGC 7 cut(s) 66, 83, 133, 286, 291, 536, 550
Ple19I CGATCG 1 cut(s) 314
PleI GAGTC 3 cut(s) 225, 899, 1515
PpsI GAGTC 3 cut(s) 225, 899, 1515
PpuMI RGGWCCY 1 cut(s) 1247
PscI ACATGT 1 cut(s) 1053
PshBI ATTAAT 1 cut(s) 786
Psp5II RGGWCCY 1 cut(s) 1247
Psp6I CCWGG 2 cut(s) 76, 1515
PspFI CCCAGC 1 cut(s) 1399
PspGI CCWGG 2 cut(s) 76, 1515
PspN4I GGNNCC 3 cut(s) 75, 748, 1159
PspPI GGNCC 4 cut(s) 838, 1028, 1175, 1247
PspPPI RGGWCCY 1 cut(s) 1247
PsrI GAACNNNNNNTAC 2 cut(s) 713, 745
PstI CTGCAG 2 cut(s) 197, 216
PsuI RGATCY 1 cut(s) 1366
PvuI CGATCG 1 cut(s) 314
RsaI GTAC 1 cut(s) 1759
RsaNI GTAC 1 cut(s) 1758
RseI CAYNNNNRTG 1 cut(s) 1461
SalI GTCGAC 2 cut(s) 58, 302
SapI GCTCTTC 1 cut(s) 594
SatI GCNGC 7 cut(s) 65, 82, 132, 285, 290, 535, 549
Sau3AI GATC 5 cut(s) 43, 311, 633, 972, 1366
Sau96I GGNCC 4 cut(s) 838, 1028, 1175, 1247
SchI GAGTC 3 cut(s) 225, 900, 1516
ScrFI CCNGG 2 cut(s) 78, 1517
SduI GDGCHC 1 cut(s) 697
SfaNI GCATC 2 cut(s) 1603, 1745
SfcI CTRYAG 2 cut(s) 193, 212
Sfr274I CTCGAG 1 cut(s) 1623
SgrAI CRCCGGYG 1 cut(s) 225
SgrDI CGTCGACG 2 cut(s) 58, 302
SinI GGWCC 2 cut(s) 1175, 1247
SlaI CTCGAG 1 cut(s) 1623
SmiMI CAYNNNNRTG 1 cut(s) 1461
SmlI CTYRAG 1 cut(s) 1623
SmoI CTYRAG 1 cut(s) 1623
SseBI AGGCCT 1 cut(s) 1413
SsiI CCGC 9 cut(s) 52, 71, 243, 266, 285, 290, 295, 353, 841
SspI AATATT 3 cut(s) 1117, 1138, 1636
SspMI CTAG 3 cut(s) 413, 531, 1511
StuI AGGCCT 1 cut(s) 1413
StyD4I CCNGG 2 cut(s) 76, 1515
StyI CCWWGG 2 cut(s) 814, 1414
TaaI ACNGT 2 cut(s) 526, 809
TaiI ACGT 3 cut(s) 59, 334, 369
TaqI TCGA 9 cut(s) 59, 138, 144, 303, 310, 314, 706, 1624, 1712
TatI WGTACW 1 cut(s) 1757
TauI GCSGC 2 cut(s) 287, 292
TfiI GAWTC 3 cut(s) 985, 1453, 1501
TscAI CASTG 3 cut(s) 100, 622, 1468
TseFI GTSAC 3 cut(s) 617, 682, 737
TseI GCWGC 5 cut(s) 64, 81, 131, 534, 548
Tsp45I GTSAC 3 cut(s) 617, 682, 737
TspDTI ATGAA 3 cut(s) 17, 846, 874
TspGWI ACGGA 1 cut(s) 888
TspRI CASTG 3 cut(s) 100, 622, 1468
VneI GTGCAC 1 cut(s) 693
VpaK11BI GGWCC 2 cut(s) 1175, 1247
VspI ATTAAT 1 cut(s) 786
XapI RAATTY 4 cut(s) 960, 1104, 1150, 1663
XbaI TCTAGA 1 cut(s) 1510
XceI RCATGY 1 cut(s) 1057
XcmI CCANNNNNNNNNTGG 2 cut(s) 123, 1431
XhoI CTCGAG 1 cut(s) 1623
XmiI GTMKAC 2 cut(s) 59, 303
XspI CTAG 3 cut(s) 413, 531, 1511
ZraI GACGTC 1 cut(s) 57
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.