Rh2CG247600

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000229
Physical Location & Seq
Reverse (-)
26002292 .. 26012435
10144 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG247600.1

Sequence Viewer

Length: 1278 bp
ATGGAGAGAGTTACTTGGTTCTTCCAGGTATACTTATTATGTTGTACAACGGTTAGCTTCTTAACTATGGCAGCACGAACCAACCTTAACATCACCACAGACCGATCTGCTCTTCTTTCTCTCAAAGCCCATATCATCAGTGACCCTCAAAACAAGATCTTTACCAATTGGTCAACCACTACCCCTGTTTGCAACTGGGTTGGTGTCATTTGTGGTGCACGTCATCCTCGAGTCGCAGAGTTGAACCTCTCTTACTTTGGTCTCGCGGGCACCATTCCTCCTGAGCTAGGCAACTTATCATTGCTTGTTGATTTGGATATCCAAAATAACAGTTTCCAGGGTACTTTGCCTAAGGAATTAGCTCGCCTGCGTCGGTTGAAGTTTATTAACTTGGGATACAACAAGTTTATGGGAGTGATTCCGTCATGGTTTGGGTCCTTGTCCAAACTTCAAGGTTTCAGGTTGTTTGGTAATCAATTTTCAGGTTCCATACCAGCTACCATCTTCAACTTATCTGCTTTGCAAGTAATTGATCTGGATTATAACCAACTCTCAGGTAGAATTTCTGGAGAAATCGGGAACCTAACAACATTGAAGGAGATCTACCTTGATCGTAATAATTTTGAAGAAATTCCAAAAGAGATCGGCACTTTGAATCAGTTGGAAAACTTGGTGGTGCAAGAAAATGCCTTAAAAGGCCGTATTCCTATGGCTGTCTTCAACATGTCTTCTTTGACTGTTTTAACTTTCTATGGGAACAACTTGATTGGTAGAATTCCGGACAATATATGTCAACATCTTCCTAATATTCAAATTTTGTATTTGGGTAAAAATCAGTTCAATGGCCCACTTCCTTCCACATTTGGGCAATGCAAACACCTTCTTGAATTAAACTTGGAGGTTAACAGGTTGAGTGGAAGAATACCCAAAAATATTGGAAATTTAACCCAGATAAAGATGCTTAGCTTTACCACAAACAGCTTGACAGATTGCTGTGATGGGTCACACGATTCCTATCGAAATGTGTCACAAAACATAGTCAGTAAAGAGTCATGTCACATTGATTTGATTGCTACGATCGAAATGTGCCGCACTTTCCAACACCTTAGACTAAAACACACTCGTGGATGGGCTAGCCCAAGACACAATGGACTCTATCTTTCTCTCTGTAAGGCTGGACTTTGTGGGCGAGCCCAAGACAGACTACAGCTCTCTTCTGGCGCATCGCCGCTTGCTGGGTTGGAGTTTCACTGTTTCAGTGGTTCTGTTCACTCTTGA

Protein Analysis

425

Amino Acids

47.4

Weight (kDa)

8.94

Isoelectric Point (pI)

32.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 33 - 71 1.9e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 82 - 180 3e-07 Leucine-rich repeat region
LRR_8 PF13855 129 - 184 4.4e-06 Leucine rich repeat
LRR_14 PF23598 169 - 251 2.8e-09 Leucine-rich repeat region
LRR_8 PF13855 220 - 280 7.8e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000229)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13780 FvH4_1g13790 FvH4_3g37750
malus_domestica MD00G1192800.v1.1 MD02G1291700.v1.1 MD03G1180500.v1.1 MD03G1181600.v1.1 MD03G1181700.v1.1 MD03G1181900.v1.1 MD03G1182700.v1.1 MD03G1281400.v1.1 MD05G1297800.v1.1 MD05G1298300.v1.1 MD07G1034800.v1.1 MD10G1265200.v1.1 MD10G1277500.v1.1
prunus_persica Prupe.4G063500_v2.0.a1 Prupe.6G160500_v2.0.a1
pyrus_communis pycom04g04980 pycom05g27570 pycom05g27590 pycom10g25090
rosa_chinensis RchiOBHm_Chr2g0113621 RchiOBHm_Chr2g0113671 RchiOBHm_Chr2g0113771 RchiOBHm_Chr2g0113871 RchiOBHm_Chr2g0114031 RchiOBHm_Chr2g0114181 RchiOBHm_Chr2g0114201 RchiOBHm_Chr2g0114231 RchiOBHm_Chr2g0114241 RchiOBHm_Chr4g0403181 RchiOBHm_Chr4g0404251 RchiOBHm_Chr4g0404291 RchiOBHm_Chr4g0404471 RchiOBHm_Chr5g0010961 RchiOBHm_Chr5g0010971 RchiOBHm_Chr5g0010981 RchiOBHm_Chr5g0011131 RchiOBHm_Chr5g0011311 RchiOBHm_Chr5g0011321 RchiOBHm_Chr5g0011361 RchiOBHm_Chr5g0016031 RchiOBHm_Chr5g0040141 RchiOBHm_Chr5g0040411 RchiOBHm_Chr5g0040471 RchiOBHm_Chr5g0059151 RchiOBHm_Chr5g0059191 RchiOBHm_Chr6g0251861 RchiOBHm_Chr7g0213311 RchiOBHm_Chr7g0213321
rosa_laevigata RLG00000009001 RLG00000009062 RLG00000018075 RLG00000018085 RLG00000018097 RLG00000031818 RLG00000034199
rosa_multiflora Rmu_co7972198.1_g000001 Rmu_co8328773.1_g000001 Rmu_sc0000929.1_g000033 Rmu_sc0001023.1_g000056 Rmu_sc0001699.1_g000007 Rmu_sc0003151.1_g000028 Rmu_sc0003242.1_g000010 Rmu_sc0004283.1_g000012 Rmu_sc0004283.1_g000036 Rmu_sc0004283.1_g000048 Rmu_sc0004283.1_g000066 Rmu_sc0005187.1_g000011 Rmu_sc0007010.1_g000008 Rmu_sc0007109.1_g000001 Rmu_sc0008397.1_g000007 Rmu_sc0009151.1_g000001 Rmu_sc0009639.1_g000020 Rmu_sc0009975.1_g000007 Rmu_sc0009975.1_g000010 Rmu_sc0010543.1_g000006 Rmu_sc0011398.1_g000001 Rmu_sc0011941.1_g000025 Rmu_sc0013141.1_g000002 Rmu_sc0016457.1_g000002 Rmu_sc0038501.1_g000001 Rmu_ssc0000303.1_g000008
rosa_roxburghii Rroxscaffold_1G00040180 Rroxscaffold_1G00040280 Rroxscaffold_1G00040900 Rroxscaffold_1G00064830 Rroxscaffold_1G00065410 Rroxscaffold_2G00130010 Rroxscaffold_2G00130040
rosa_rugosa Rorug02G0188500 Rorug02G0188800 Rorug02G0188900 Rorug02G0189500 Rorug04G0458400 Rorug05G0184800
rosa_samantha Rh1CG253300 Rh2CG247500 Rh2CG247600 Rh2CG247900 Rh2CG248300 Rh2CG249100 Rh2CG249400 Rh2CG249800 Rh2CG249900 Rh2CG250000 Rh2CG250100 Rh2CG250200 Rh2CG262700 Rh4AG118100 Rh4AG118300 Rh4AG364100 Rh4BG106900 Rh4CG125100 Rh4DG110100 Rh4DG110500 Rh4DG110600 Rh4DG369800 Rh5CG093500 Rh5CG093600 Rh5CG093700 Rh5CG095300 Rh5CG095500 Rh5CG096100 Rh5CG096200 Rh5CG096400 Rh5CG099600 Rh5CG134600 Rh5CG421300 Rh6DG142900 Rh7AG370200
rosa_wichuraiana Rw0G001470 Rw0G014660 Rw0G017510 Rw0G017750 Rw1G005500 Rw2G018440 Rw2G018460 Rw2G018490 Rw2G019150 Rw4G009550 Rw5G007590 Rw5G007860 Rw6G001510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 543
AccB1I GGYRCC 1 cut(s) 269
AccI GTMKAC 1 cut(s) 30
AccII CGCG 1 cut(s) 266
AccIII TCCGGA 1 cut(s) 778
AciI CCGC 3 cut(s) 266, 1090, 1229
AcsI RAATTY 5 cut(s) 561, 630, 774, 813, 940
AfaI GTAC 2 cut(s) 46, 343
AfiI CCNNNNNNNGG 3 cut(s) 287, 864, 1235
AflIII ACRYGT 1 cut(s) 723
AjiI CACGTC 1 cut(s) 221
AjnI CCWGG 2 cut(s) 24, 336
AleI CACNNNNGTG 1 cut(s) 1122
AluBI AGCT 7 cut(s) 57, 286, 362, 497, 966, 981, 1210
AluI AGCT 7 cut(s) 57, 286, 362, 497, 966, 981, 1210
Alw21I GWGCWC 1 cut(s) 220
Alw26I GTCTC 1 cut(s) 266
Alw44I GTGCAC 1 cut(s) 216
Ama87I CYCGRG 1 cut(s) 228
Aor13HI TCCGGA 1 cut(s) 778
AoxI GGCC 2 cut(s) 697, 844
ApaLI GTGCAC 1 cut(s) 216
ApeKI GCWGC 1 cut(s) 71
ApoI RAATTY 5 cut(s) 561, 630, 774, 813, 940
Asp700I GAANNNNTTC 1 cut(s) 630
AspLEI GCGC 1 cut(s) 1223
AspS9I GGNCC 2 cut(s) 435, 845
AsuHPI GGTGA 1 cut(s) 85
AsuNHI GCTAGC 1 cut(s) 1133
AvaI CYCGRG 1 cut(s) 228
AvaII GGWCC 1 cut(s) 435
AxyI CCTNAGG 1 cut(s) 351
BaeGI GKGCMC 2 cut(s) 220, 272
BanI GGYRCC 1 cut(s) 269
BanII GRGCYC 1 cut(s) 1195
BarI GAAGNNNNNNTAC 2 cut(s) 587, 619
BauI CACGAG 1 cut(s) 1122
BbsI GAAGAC 2 cut(s) 709, 720
Bbv12I GWGCWC 1 cut(s) 220
BbvI GCAGC 1 cut(s) 83
BccI CCATC 3 cut(s) 509, 992, 1122
BceAI ACGGC 1 cut(s) 684
BciT130I CCWGG 2 cut(s) 26, 338
BciVI GTATCC 1 cut(s) 389
BcoDI GTCTC 1 cut(s) 266
BfaI CTAG 2 cut(s) 287, 1134
BfmI CTRYAG 1 cut(s) 1205
BfuI GTATCC 1 cut(s) 389
BglII AGATCT 2 cut(s) 156, 600
BisI GCNGC 3 cut(s) 72, 1090, 1229
BlpI GCTNAGC 1 cut(s) 962
BlsI GCNGC 3 cut(s) 73, 1091, 1230
Bme1390I CCNGG 2 cut(s) 26, 338
Bme18I GGWCC 1 cut(s) 435
BmeT110I CYCGRG 1 cut(s) 228
BmgBI CACGTC 1 cut(s) 221
BmgT120I GGNCC 2 cut(s) 435, 845
BmiI GGNNCC 4 cut(s) 271, 436, 487, 581
BmrFI CCNGG 2 cut(s) 26, 338
BmrI ACTGGG 1 cut(s) 205
BmsI GCATC 2 cut(s) 948, 1232
BmtI GCTAGC 1 cut(s) 1137
BmuI ACTGGG 1 cut(s) 205
BpiI GAAGAC 2 cut(s) 709, 720
BpmI CTGGAG 1 cut(s) 588
Bpu10I CCTNAGC 1 cut(s) 282
Bpu1102I GCTNAGC 1 cut(s) 962
BsaBI GATNNNNATC 1 cut(s) 1014
BsaI GGTCTC 1 cut(s) 266
BsaJI CCNNGG 1 cut(s) 337
BsaWI WCCGGW 1 cut(s) 778
BsaXI ACNNNNNCTCC 2 cut(s) 262, 292
Bsc4I CCNNNNNNNGG 3 cut(s) 287, 864, 1235
Bse1I ACTGG 1 cut(s) 200
Bse21I CCTNAGG 1 cut(s) 351
Bse3DI GCAATG 2 cut(s) 299, 875
Bse8I GATNNNNATC 1 cut(s) 1014
BseAI TCCGGA 1 cut(s) 778
BseBI CCWGG 2 cut(s) 26, 338
BseDI CCNNGG 1 cut(s) 337
BseGI GGATG 2 cut(s) 223, 1133
BseJI GATNNNNATC 1 cut(s) 1014
BseLI CCNNNNNNNGG 3 cut(s) 287, 864, 1235
BseMI GCAATG 2 cut(s) 299, 875
BseMII CTCAG 2 cut(s) 273, 567
BseNI ACTGG 1 cut(s) 200
BseSI GKGCMC 2 cut(s) 220, 272
BseXI GCAGC 1 cut(s) 83
BseYI CCCAGC 1 cut(s) 1235
Bsh1236I CGCG 1 cut(s) 266
Bsh1285I CGRYCG 1 cut(s) 1080
BshFI GGCC 2 cut(s) 699, 846
BshNI GGYRCC 1 cut(s) 269
BsiEI CGRYCG 1 cut(s) 1080
BsiHKAI GWGCWC 1 cut(s) 220
BsiHKCI CYCGRG 1 cut(s) 228
BsiSI CCGG 1 cut(s) 779
BslI CCNNNNNNNGG 3 cut(s) 287, 864, 1235
BsmAI GTCTC 1 cut(s) 266
BsnI GGCC 2 cut(s) 699, 846
Bso31I GGTCTC 1 cut(s) 266
BsoBI CYCGRG 1 cut(s) 228
Bsp1286I GDGCHC 3 cut(s) 220, 272, 1195
Bsp13I TCCGGA 1 cut(s) 778
Bsp1407I TGTACA 1 cut(s) 44
Bsp143I GATC 7 cut(s) 104, 156, 532, 600, 610, 642, 1077
Bsp1720I GCTNAGC 1 cut(s) 962
BspACI CCGC 3 cut(s) 266, 1090, 1229
BspANI GGCC 2 cut(s) 699, 846
BspCNI CTCAG 2 cut(s) 274, 566
BspEI TCCGGA 1 cut(s) 778
BspFNI CGCG 1 cut(s) 266
BspLI GGNNCC 4 cut(s) 271, 436, 487, 581
BspOI GCTAGC 1 cut(s) 1137
BspQI GCTCTTC 1 cut(s) 117
BspT107I GGYRCC 1 cut(s) 269
BspTNI GGTCTC 1 cut(s) 266
BsrDI GCAATG 2 cut(s) 299, 875
BsrGI TGTACA 1 cut(s) 44
BsrI ACTGG 1 cut(s) 200
BssECI CCNNGG 1 cut(s) 337
BssMI GATC 7 cut(s) 104, 156, 532, 600, 610, 642, 1077
BssNAI GTATAC 1 cut(s) 31
BssSI CACGAG 1 cut(s) 1122
Bst1107I GTATAC 1 cut(s) 31
Bst2BI CACGAG 1 cut(s) 1122
Bst2UI CCWGG 2 cut(s) 26, 338
Bst4CI ACNGT 4 cut(s) 52, 332, 739, 1253
Bst6I CTCTTC 2 cut(s) 117, 1219
BstAUI TGTACA 1 cut(s) 44
BstC8I GCNNGC 6 cut(s) 268, 364, 368, 1135, 1191, 1233
BstDEI CTNAG 5 cut(s) 282, 351, 553, 962, 1106
BstENI CCTNNNNNAGG 1 cut(s) 285
BstF5I GGATG 2 cut(s) 223, 1133
BstFNI CGCG 1 cut(s) 266
BstHHI GCGC 1 cut(s) 1223
BstKTI GATC 7 cut(s) 107, 159, 535, 603, 613, 645, 1080
BstMAI GTCTC 1 cut(s) 266
BstMBI GATC 7 cut(s) 104, 156, 532, 600, 610, 642, 1077
BstMCI CGRYCG 1 cut(s) 1080
BstNI CCWGG 2 cut(s) 26, 338
BstNSI RCATGY 1 cut(s) 727
BstSCI CCNGG 2 cut(s) 24, 336
BstSFI CTRYAG 1 cut(s) 1205
BstSLI GKGCMC 2 cut(s) 220, 272
BstUI CGCG 1 cut(s) 266
BstV1I GCAGC 1 cut(s) 83
BstV2I GAAGAC 2 cut(s) 709, 720
BstX2I RGATCY 2 cut(s) 156, 600
BstYI RGATCY 2 cut(s) 156, 600
BstZ17I GTATAC 1 cut(s) 31
Bsu36I CCTNAGG 1 cut(s) 351
BsuI GTATCC 1 cut(s) 389
BsuRI GGCC 2 cut(s) 699, 846
BtgZI GCGATG 1 cut(s) 1209
BtrI CACGTC 1 cut(s) 221
BtsCI GGATG 2 cut(s) 223, 1133
BtsIMutI CAGTG 3 cut(s) 145, 1249, 1264
Cac8I GCNNGC 6 cut(s) 268, 364, 368, 1135, 1191, 1233
CfoI GCGC 1 cut(s) 1223
Cfr13I GGNCC 2 cut(s) 435, 845
CseI GACGC 1 cut(s) 359
Csp6I GTAC 2 cut(s) 45, 342
CviAII CATG 3 cut(s) 426, 724, 1053
CviQI GTAC 2 cut(s) 45, 342
DdeI CTNAG 5 cut(s) 282, 351, 553, 962, 1106
DpnI GATC 7 cut(s) 106, 158, 534, 602, 612, 644, 1079
DpnII GATC 7 cut(s) 104, 156, 532, 600, 610, 642, 1077
Eam1104I CTCTTC 2 cut(s) 117, 1219
EarI CTCTTC 2 cut(s) 117, 1219
Eco24I GRGCYC 1 cut(s) 1195
Eco31I GGTCTC 1 cut(s) 266
Eco32I GATATC 1 cut(s) 319
Eco47I GGWCC 1 cut(s) 435
Eco81I CCTNAGG 1 cut(s) 351
Eco88I CYCGRG 1 cut(s) 228
EcoNI CCTNNNNNAGG 1 cut(s) 285
EcoO109I RGGNCCY 1 cut(s) 435
EcoRI GAATTC 1 cut(s) 774
EcoRII CCWGG 2 cut(s) 24, 336
EcoRV GATATC 1 cut(s) 319
EcoT38I GRGCYC 1 cut(s) 1195
FaeI CATG 3 cut(s) 429, 727, 1056
FatI CATG 3 cut(s) 425, 723, 1052
FauI CCCGC 1 cut(s) 259
FblI GTMKAC 1 cut(s) 30
Fnu4HI GCNGC 3 cut(s) 72, 1090, 1229
FokI GGATG 2 cut(s) 210, 1140
FriOI GRGCYC 1 cut(s) 1195
Fsp4HI GCNGC 3 cut(s) 72, 1090, 1229
FspBI CTAG 2 cut(s) 287, 1134
GlaI GCGC 1 cut(s) 1222
GluI GCNGC 3 cut(s) 72, 1090, 1229
GsaI CCCAGC 1 cut(s) 1239
GsuI CTGGAG 1 cut(s) 588
HaeIII GGCC 2 cut(s) 699, 846
HapII CCGG 1 cut(s) 779
HgaI GACGC 1 cut(s) 359
HhaI GCGC 1 cut(s) 1223
Hin1II CATG 3 cut(s) 429, 727, 1056
Hin6I GCGC 1 cut(s) 1221
HinP1I GCGC 1 cut(s) 1221
HincII GTYRAC 3 cut(s) 174, 794, 904
HindII GTYRAC 3 cut(s) 174, 794, 904
HinfI GANTC 6 cut(s) 231, 418, 655, 1010, 1049, 1152
HpaI GTTAAC 1 cut(s) 904
HpaII CCGG 1 cut(s) 779
HphI GGTGA 1 cut(s) 85
Hpy166II GTNNAC 6 cut(s) 31, 174, 218, 794, 904, 1270
Hpy188III TCNNGA 7 cut(s) 281, 536, 567, 577, 779, 884, 1275
Hpy8I GTNNAC 6 cut(s) 31, 174, 218, 794, 904, 1270
Hpy99I CGWCG 1 cut(s) 375
HpyAV CCTTC 3 cut(s) 589, 864, 890
HpyCH4III ACNGT 4 cut(s) 52, 332, 739, 1253
HpyCH4IV ACGT 1 cut(s) 220
HpyCH4V TGCA 5 cut(s) 192, 218, 523, 679, 873
HpyF3I CTNAG 5 cut(s) 282, 351, 553, 962, 1106
HpySE526I ACGT 1 cut(s) 220
Hsp92II CATG 3 cut(s) 429, 727, 1056
HspAI GCGC 1 cut(s) 1221
Kpn2I TCCGGA 1 cut(s) 778
KspAI GTTAAC 1 cut(s) 904
Kzo9I GATC 7 cut(s) 104, 156, 532, 600, 610, 642, 1077
LguI GCTCTTC 1 cut(s) 117
Lsp1109I GCAGC 1 cut(s) 83
LweI GCATC 2 cut(s) 948, 1232
MaeI CTAG 2 cut(s) 287, 1134
MaeII ACGT 1 cut(s) 220
MaeIII GTNAC 5 cut(s) 10, 140, 1002, 1026, 1055
MalI GATC 7 cut(s) 106, 158, 534, 602, 612, 644, 1079
MboI GATC 7 cut(s) 104, 156, 532, 600, 610, 642, 1077
MboII GAAGA 9 cut(s) 13, 104, 496, 638, 709, 720, 791, 930, 1206
MfeI CAATTG 1 cut(s) 166
MflI RGATCY 2 cut(s) 156, 600
MhlI GDGCHC 3 cut(s) 220, 272, 1195
MlyI GAGTC 3 cut(s) 240, 1058, 1146
MmeI TCCRAC 3 cut(s) 642, 1123, 1221
MnlI CCTC 5 cut(s) 156, 237, 257, 288, 892
MroI TCCGGA 1 cut(s) 778
MroXI GAANNNNTTC 1 cut(s) 630
MseI TTAA 8 cut(s) 62, 87, 387, 692, 743, 890, 903, 944
MslI CAYNNNNRTG 1 cut(s) 1122
MspI CCGG 1 cut(s) 779
MspR9I CCNGG 2 cut(s) 26, 338
MunI CAATTG 1 cut(s) 166
MvaI CCWGG 2 cut(s) 26, 338
MvnI CGCG 1 cut(s) 266
NdeII GATC 7 cut(s) 104, 156, 532, 600, 610, 642, 1077
NheI GCTAGC 1 cut(s) 1133
NlaIII CATG 3 cut(s) 429, 727, 1056
NlaIV GGNNCC 4 cut(s) 271, 436, 487, 581
NmuCI GTSAC 4 cut(s) 140, 1002, 1026, 1055
NspI RCATGY 1 cut(s) 727
OliI CACNNNNGTG 1 cut(s) 1122
PaeR7I CTCGAG 1 cut(s) 228
PciI ACATGT 1 cut(s) 723
PciSI GCTCTTC 1 cut(s) 117
PcsI WCGNNNNNNNCGW 1 cut(s) 226
PdmI GAANNNNTTC 1 cut(s) 630
PfeI GAWTC 3 cut(s) 418, 655, 1010
PkrI GCNGC 3 cut(s) 73, 1091, 1230
Ple19I CGATCG 1 cut(s) 1080
PleI GAGTC 3 cut(s) 239, 1057, 1146
PpsI GAGTC 3 cut(s) 239, 1057, 1146
PpuMI RGGWCCY 1 cut(s) 435
PscI ACATGT 1 cut(s) 723
PsiI TTATAA 1 cut(s) 543
Psp5II RGGWCCY 1 cut(s) 435
Psp6I CCWGG 2 cut(s) 24, 336
PspFI CCCAGC 1 cut(s) 1235
PspGI CCWGG 2 cut(s) 24, 336
PspN4I GGNNCC 4 cut(s) 271, 436, 487, 581
PspPI GGNCC 2 cut(s) 435, 845
PspPPI RGGWCCY 1 cut(s) 435
PspXI VCTCGAGB 1 cut(s) 228
PsrI GAACNNNNNNTAC 2 cut(s) 236, 268
PsuI RGATCY 2 cut(s) 156, 600
PvuI CGATCG 1 cut(s) 1080
RsaI GTAC 2 cut(s) 46, 343
RsaNI GTAC 2 cut(s) 45, 342
RseI CAYNNNNRTG 1 cut(s) 1122
SapI GCTCTTC 1 cut(s) 117
SaqAI TTAA 8 cut(s) 62, 87, 387, 692, 743, 890, 903, 944
SatI GCNGC 3 cut(s) 72, 1090, 1229
Sau3AI GATC 7 cut(s) 104, 156, 532, 600, 610, 642, 1077
Sau96I GGNCC 2 cut(s) 435, 845
SchI GAGTC 3 cut(s) 240, 1058, 1146
ScrFI CCNGG 2 cut(s) 26, 338
SduI GDGCHC 3 cut(s) 220, 272, 1195
SfaNI GCATC 2 cut(s) 948, 1232
SfcI CTRYAG 1 cut(s) 1205
Sfr274I CTCGAG 1 cut(s) 228
SinI GGWCC 1 cut(s) 435
SlaI CTCGAG 1 cut(s) 228
SmiMI CAYNNNNRTG 1 cut(s) 1122
SmlI CTYRAG 1 cut(s) 228
SmoI CTYRAG 1 cut(s) 228
SsiI CCGC 3 cut(s) 266, 1090, 1229
SspI AATATT 2 cut(s) 808, 934
SspMI CTAG 2 cut(s) 287, 1134
StyD4I CCNGG 2 cut(s) 24, 336
TaaI ACNGT 4 cut(s) 52, 332, 739, 1253
TaiI ACGT 1 cut(s) 223
TaqI TCGA 3 cut(s) 229, 1018, 1080
TaqII GACCGA 1 cut(s) 117
TatI WGTACW 1 cut(s) 44
TauI GCSGC 2 cut(s) 1092, 1231
TfiI GAWTC 3 cut(s) 418, 655, 1010
Tru1I TTAA 8 cut(s) 62, 87, 387, 692, 743, 890, 903, 944
Tru9I TTAA 8 cut(s) 62, 87, 387, 692, 743, 890, 903, 944
TscAI CASTG 3 cut(s) 145, 1256, 1264
TseFI GTSAC 4 cut(s) 140, 1002, 1026, 1055
TseI GCWGC 1 cut(s) 71
Tsp45I GTSAC 4 cut(s) 140, 1002, 1026, 1055
TspGWI ACGGA 1 cut(s) 411
TspRI CASTG 3 cut(s) 145, 1256, 1264
VneI GTGCAC 1 cut(s) 216
VpaK11BI GGWCC 1 cut(s) 435
XagI CCTNNNNNAGG 1 cut(s) 285
XapI RAATTY 5 cut(s) 561, 630, 774, 813, 940
XceI RCATGY 1 cut(s) 727
XhoI CTCGAG 1 cut(s) 228
XmiI GTMKAC 1 cut(s) 30
XmnI GAANNNNTTC 1 cut(s) 630
XspI CTAG 2 cut(s) 287, 1134
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.