Rmu_sc0004283.1_g000066

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004283.1
Physical Location & Seq
Reverse (-)
261073 .. 264836
3764 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004283.1_g000066.1.cds

Sequence Viewer

Length: 780 bp
atggagagagttacttggttcttcttgatatacttgatctattgtgaggcggctaactgcttaactatggcagcacaaaccaagcttaacatcaccacagaccggtctgctcttcttgctcttaaagcctgtatcaccagtgaccttcaaaacgtgatcttcaccaactggtcaaccactactcctatttgcaattgggttggggtcacttgtggtgcacgccatcatcgagtcgcagacttgaacctctcttactttggtctcacaggcaccattcctccggagttaggaaacttatcatttcttgttaatatggacttcagcaataacagtttccatggtatattgcctcaggaattggctcgcttgcattggttgaagtttatcagcttgggaaacaacaagttcatgggagtcattccgtcatggtttgggggactcctcgcctactgcctccaccctgacccttaccctgatgcctctggtactcctggagatgagccgacaatagcagcacaacttggtcctataccatatgagattgtttatcttccaaatgttgaggaattgtcgctcgatgaaaataatctaagtggccatatcccgtcctcaatcttcaatatgtccacaataaaagtattatatcttggcctcaatcagctttcaggtagcctcccagtagaaataggccttgcgcttccaaaactagaagagtttgaagcaggagggagggaatcacctcagtggactaatccccaaatccttctccaatacttctaa

Protein Analysis

259

Amino Acids

28.7

Weight (kDa)

4.92

Isoelectric Point (pI)

32.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000229)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13780 FvH4_1g13790 FvH4_3g37750
malus_domestica MD00G1192800.v1.1 MD02G1291700.v1.1 MD03G1180500.v1.1 MD03G1181600.v1.1 MD03G1181700.v1.1 MD03G1181900.v1.1 MD03G1182700.v1.1 MD03G1281400.v1.1 MD05G1297800.v1.1 MD05G1298300.v1.1 MD07G1034800.v1.1 MD10G1265200.v1.1 MD10G1277500.v1.1
prunus_persica Prupe.4G063500_v2.0.a1 Prupe.6G160500_v2.0.a1
pyrus_communis pycom04g04980 pycom05g27570 pycom05g27590 pycom10g25090
rosa_chinensis RchiOBHm_Chr2g0113621 RchiOBHm_Chr2g0113671 RchiOBHm_Chr2g0113771 RchiOBHm_Chr2g0113871 RchiOBHm_Chr2g0114031 RchiOBHm_Chr2g0114181 RchiOBHm_Chr2g0114201 RchiOBHm_Chr2g0114231 RchiOBHm_Chr2g0114241 RchiOBHm_Chr4g0403181 RchiOBHm_Chr4g0404251 RchiOBHm_Chr4g0404291 RchiOBHm_Chr4g0404471 RchiOBHm_Chr5g0010961 RchiOBHm_Chr5g0010971 RchiOBHm_Chr5g0010981 RchiOBHm_Chr5g0011131 RchiOBHm_Chr5g0011311 RchiOBHm_Chr5g0011321 RchiOBHm_Chr5g0011361 RchiOBHm_Chr5g0016031 RchiOBHm_Chr5g0040141 RchiOBHm_Chr5g0040411 RchiOBHm_Chr5g0040471 RchiOBHm_Chr5g0059151 RchiOBHm_Chr5g0059191 RchiOBHm_Chr6g0251861 RchiOBHm_Chr7g0213311 RchiOBHm_Chr7g0213321
rosa_laevigata RLG00000009001 RLG00000009062 RLG00000018075 RLG00000018085 RLG00000018097 RLG00000031818 RLG00000034199
rosa_multiflora Rmu_co7972198.1_g000001 Rmu_co8328773.1_g000001 Rmu_sc0000929.1_g000033 Rmu_sc0001023.1_g000056 Rmu_sc0001699.1_g000007 Rmu_sc0003151.1_g000028 Rmu_sc0003242.1_g000010 Rmu_sc0004283.1_g000012 Rmu_sc0004283.1_g000036 Rmu_sc0004283.1_g000048 Rmu_sc0004283.1_g000066 Rmu_sc0005187.1_g000011 Rmu_sc0007010.1_g000008 Rmu_sc0007109.1_g000001 Rmu_sc0008397.1_g000007 Rmu_sc0009151.1_g000001 Rmu_sc0009639.1_g000020 Rmu_sc0009975.1_g000007 Rmu_sc0009975.1_g000010 Rmu_sc0010543.1_g000006 Rmu_sc0011398.1_g000001 Rmu_sc0011941.1_g000025 Rmu_sc0013141.1_g000002 Rmu_sc0016457.1_g000002 Rmu_sc0038501.1_g000001 Rmu_ssc0000303.1_g000008
rosa_roxburghii Rroxscaffold_1G00040180 Rroxscaffold_1G00040280 Rroxscaffold_1G00040900 Rroxscaffold_1G00064830 Rroxscaffold_1G00065410 Rroxscaffold_2G00130010 Rroxscaffold_2G00130040
rosa_rugosa Rorug02G0188500 Rorug02G0188800 Rorug02G0188900 Rorug02G0189500 Rorug04G0458400 Rorug05G0184800
rosa_samantha Rh1CG253300 Rh2CG247500 Rh2CG247600 Rh2CG247900 Rh2CG248300 Rh2CG249100 Rh2CG249400 Rh2CG249800 Rh2CG249900 Rh2CG250000 Rh2CG250100 Rh2CG250200 Rh2CG262700 Rh4AG118100 Rh4AG118300 Rh4AG364100 Rh4BG106900 Rh4CG125100 Rh4DG110100 Rh4DG110500 Rh4DG110600 Rh4DG369800 Rh5CG093500 Rh5CG093600 Rh5CG093700 Rh5CG095300 Rh5CG095500 Rh5CG096100 Rh5CG096200 Rh5CG096400 Rh5CG099600 Rh5CG134600 Rh5CG421300 Rh6DG142900 Rh7AG370200
rosa_wichuraiana Rw0G001470 Rw0G014660 Rw0G017510 Rw0G017750 Rw1G005500 Rw2G018440 Rw2G018460 Rw2G018490 Rw2G019150 Rw4G009550 Rw5G007590 Rw5G007860 Rw6G001510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 269
AccIII TCCGGA 1 cut(s) 280
AciI CCGC 1 cut(s) 50
AcoI YGGCCR 1 cut(s) 595
AcuI CTGAAG 1 cut(s) 304
AfaI GTAC 1 cut(s) 487
AfiI CCNNNNNNNGG 2 cut(s) 102, 287
AgeI ACCGGT 1 cut(s) 102
AgsI TTSAA 5 cut(s) 149, 244, 379, 619, 719
AjnI CCWGG 1 cut(s) 490
AleI CACNNNNGTG 1 cut(s) 742
AluBI AGCT 3 cut(s) 85, 390, 661
AluI AGCT 3 cut(s) 85, 390, 661
Alw21I GWGCWC 1 cut(s) 220
Alw26I GTCTC 1 cut(s) 266
Alw44I GTGCAC 1 cut(s) 216
Aor13HI TCCGGA 1 cut(s) 280
AoxI GGCC 3 cut(s) 595, 649, 688
ApaLI GTGCAC 1 cut(s) 216
ApeKI GCWGC 2 cut(s) 71, 512
AsiGI ACCGGT 1 cut(s) 102
AspLEI GCGC 1 cut(s) 697
AspS9I GGNCC 1 cut(s) 524
AsuHPI GGTGA 4 cut(s) 85, 127, 154, 729
AvaII GGWCC 1 cut(s) 524
AxyI CCTNAGG 1 cut(s) 351
BaeGI GKGCMC 1 cut(s) 220
BalI TGGCCA 1 cut(s) 597
BanI GGYRCC 1 cut(s) 269
Bbv12I GWGCWC 1 cut(s) 220
BbvI GCAGC 2 cut(s) 83, 524
BccI CCATC 1 cut(s) 231
BciT130I CCWGG 1 cut(s) 492
BcoDI GTCTC 1 cut(s) 266
BfaI CTAG 1 cut(s) 707
BisI GCNGC 3 cut(s) 51, 72, 513
BlsI GCNGC 3 cut(s) 52, 73, 514
Bme1390I CCNGG 1 cut(s) 492
Bme18I GGWCC 1 cut(s) 524
BmgT120I GGNCC 1 cut(s) 524
BmiI GGNNCC 1 cut(s) 271
BmrFI CCNGG 1 cut(s) 492
BmrI ACTGGG 1 cut(s) 671
BmsI GCATC 1 cut(s) 466
BmuI ACTGGG 1 cut(s) 671
BpmI CTGGAG 1 cut(s) 513
BsaI GGTCTC 1 cut(s) 266
BsaJI CCNNGG 1 cut(s) 337
BsaWI WCCGGW 2 cut(s) 102, 280
BsaXI ACNNNNNCTCC 4 cut(s) 166, 196, 262, 292
Bsc4I CCNNNNNNNGG 2 cut(s) 102, 287
Bse118I RCCGGY 1 cut(s) 102
Bse1I ACTGG 3 cut(s) 138, 173, 677
Bse21I CCTNAGG 1 cut(s) 351
BseAI TCCGGA 1 cut(s) 280
BseBI CCWGG 1 cut(s) 492
BseDI CCNNGG 1 cut(s) 337
BseLI CCNNNNNNNGG 2 cut(s) 102, 287
BseMII CTCAG 2 cut(s) 365, 755
BseNI ACTGG 3 cut(s) 138, 173, 677
BseRI GAGGAG 1 cut(s) 431
BseSI GKGCMC 1 cut(s) 220
BseXI GCAGC 2 cut(s) 83, 524
BshFI GGCC 3 cut(s) 597, 651, 690
BshNI GGYRCC 1 cut(s) 269
BshTI ACCGGT 1 cut(s) 102
BsiHKAI GWGCWC 1 cut(s) 220
BsiSI CCGG 2 cut(s) 103, 281
BslFI GGGAC 1 cut(s) 450
BslI CCNNNNNNNGG 2 cut(s) 102, 287
BsmAI GTCTC 1 cut(s) 266
BsmFI GGGAC 1 cut(s) 450
BsnI GGCC 3 cut(s) 597, 651, 690
Bso31I GGTCTC 1 cut(s) 266
Bsp1286I GDGCHC 1 cut(s) 220
Bsp13I TCCGGA 1 cut(s) 280
Bsp143I GATC 2 cut(s) 36, 156
Bsp19I CCATGG 1 cut(s) 337
BspACI CCGC 1 cut(s) 50
BspANI GGCC 3 cut(s) 597, 651, 690
BspCNI CTCAG 2 cut(s) 364, 754
BspEI TCCGGA 1 cut(s) 280
BspLI GGNNCC 1 cut(s) 271
BspQI GCTCTTC 1 cut(s) 117
BspT107I GGYRCC 1 cut(s) 269
BspTNI GGTCTC 1 cut(s) 266
BsrFI RCCGGY 1 cut(s) 102
BsrI ACTGG 3 cut(s) 138, 173, 677
BssAI RCCGGY 1 cut(s) 102
BssECI CCNNGG 1 cut(s) 337
BssMI GATC 2 cut(s) 36, 156
BssT1I CCWWGG 1 cut(s) 337
Bst2UI CCWGG 1 cut(s) 492
Bst4CI ACNGT 1 cut(s) 332
Bst6I CTCTTC 2 cut(s) 117, 705
BstC8I GCNNGC 3 cut(s) 220, 364, 368
BstDEI CTNAG 3 cut(s) 351, 590, 741
BstDSI CCRYGG 1 cut(s) 337
BstHHI GCGC 1 cut(s) 697
BstKTI GATC 2 cut(s) 39, 159
BstMAI GTCTC 1 cut(s) 266
BstMBI GATC 2 cut(s) 36, 156
BstMWI GCNNNNNNNGC 2 cut(s) 116, 125
BstNI CCWGG 1 cut(s) 492
BstSCI CCNGG 1 cut(s) 490
BstSLI GKGCMC 1 cut(s) 220
BstV1I GCAGC 2 cut(s) 83, 524
Bsu36I CCTNAGG 1 cut(s) 351
BsuRI GGCC 3 cut(s) 597, 651, 690
BtgI CCRYGG 1 cut(s) 337
BtsIMutI CAGTG 2 cut(s) 145, 749
Cac8I GCNNGC 3 cut(s) 220, 364, 368
CfoI GCGC 1 cut(s) 697
Cfr10I RCCGGY 1 cut(s) 102
Cfr13I GGNCC 1 cut(s) 524
Csp6I GTAC 1 cut(s) 486
CspAI ACCGGT 1 cut(s) 102
CviAII CATG 3 cut(s) 338, 409, 426
CviQI GTAC 1 cut(s) 486
DdeI CTNAG 3 cut(s) 351, 590, 741
DpnI GATC 2 cut(s) 38, 158
DpnII GATC 2 cut(s) 36, 156
EaeI YGGCCR 1 cut(s) 595
Eam1104I CTCTTC 2 cut(s) 117, 705
EarI CTCTTC 2 cut(s) 117, 705
Eco130I CCWWGG 1 cut(s) 337
Eco147I AGGCCT 1 cut(s) 690
Eco31I GGTCTC 1 cut(s) 266
Eco47I GGWCC 1 cut(s) 524
Eco57I CTGAAG 1 cut(s) 304
Eco81I CCTNAGG 1 cut(s) 351
EcoRII CCWGG 1 cut(s) 490
EcoT14I CCWWGG 1 cut(s) 337
ErhI CCWWGG 1 cut(s) 337
FaeI CATG 3 cut(s) 341, 412, 429
FaqI GGGAC 1 cut(s) 450
FatI CATG 3 cut(s) 337, 408, 425
FauNDI CATATG 1 cut(s) 535
Fnu4HI GCNGC 3 cut(s) 51, 72, 513
Fsp4HI GCNGC 3 cut(s) 51, 72, 513
FspBI CTAG 1 cut(s) 707
GlaI GCGC 1 cut(s) 696
GluI GCNGC 3 cut(s) 51, 72, 513
GsuI CTGGAG 1 cut(s) 513
HaeIII GGCC 3 cut(s) 597, 651, 690
HapII CCGG 2 cut(s) 103, 281
HhaI GCGC 1 cut(s) 697
Hin1II CATG 3 cut(s) 341, 412, 429
Hin6I GCGC 1 cut(s) 695
HinP1I GCGC 1 cut(s) 695
HincII GTYRAC 1 cut(s) 174
HindII GTYRAC 1 cut(s) 174
HindIII AAGCTT 1 cut(s) 83
HinfI GANTC 4 cut(s) 231, 414, 438, 734
HpaII CCGG 2 cut(s) 103, 281
HphI GGTGA 4 cut(s) 85, 127, 154, 729
Hpy166II GTNNAC 4 cut(s) 174, 218, 627, 747
Hpy188III TCNNGA 3 cut(s) 25, 281, 353
Hpy8I GTNNAC 4 cut(s) 174, 218, 627, 747
HpyAV CCTTC 2 cut(s) 155, 773
HpyCH4III ACNGT 1 cut(s) 332
HpyCH4IV ACGT 1 cut(s) 153
HpyCH4V TGCA 3 cut(s) 192, 218, 370
HpyF10VI GCNNNNNNNGC 2 cut(s) 116, 125
HpyF3I CTNAG 3 cut(s) 351, 590, 741
HpySE526I ACGT 1 cut(s) 153
Hsp92II CATG 3 cut(s) 341, 412, 429
HspAI GCGC 1 cut(s) 695
Kpn2I TCCGGA 1 cut(s) 280
Kzo9I GATC 2 cut(s) 36, 156
LguI GCTCTTC 1 cut(s) 117
Lsp1109I GCAGC 2 cut(s) 83, 524
LweI GCATC 1 cut(s) 466
MaeI CTAG 1 cut(s) 707
MaeII ACGT 1 cut(s) 153
MaeIII GTNAC 3 cut(s) 10, 140, 205
MalI GATC 2 cut(s) 38, 158
MboI GATC 2 cut(s) 36, 156
MboII GAAGA 6 cut(s) 13, 104, 151, 542, 607, 722
MfeI CAATTG 1 cut(s) 193
MhlI GDGCHC 1 cut(s) 220
MlsI TGGCCA 1 cut(s) 597
MluCI AATT 3 cut(s) 193, 356, 566
MluNI TGGCCA 1 cut(s) 597
MlyI GAGTC 3 cut(s) 240, 423, 432
Mox20I TGGCCA 1 cut(s) 597
MroI TCCGGA 1 cut(s) 280
MscI TGGCCA 1 cut(s) 597
MseI TTAA 4 cut(s) 62, 87, 123, 309
MslI CAYNNNNRTG 1 cut(s) 742
Msp20I TGGCCA 1 cut(s) 597
MspI CCGG 2 cut(s) 103, 281
MspR9I CCNGG 1 cut(s) 492
MunI CAATTG 1 cut(s) 193
MvaI CCWGG 1 cut(s) 492
MwoI GCNNNNNNNGC 2 cut(s) 116, 125
NcoI CCATGG 1 cut(s) 337
NdeI CATATG 1 cut(s) 535
NdeII GATC 2 cut(s) 36, 156
NlaIII CATG 3 cut(s) 341, 412, 429
NlaIV GGNNCC 1 cut(s) 271
NmuCI GTSAC 2 cut(s) 140, 205
OliI CACNNNNGTG 1 cut(s) 742
PceI AGGCCT 1 cut(s) 690
PciSI GCTCTTC 1 cut(s) 117
PcsI WCGNNNNNNNCGW 1 cut(s) 226
PfeI GAWTC 1 cut(s) 734
PfoI TCCNGGA 1 cut(s) 490
PinAI ACCGGT 1 cut(s) 102
PkrI GCNGC 3 cut(s) 52, 73, 514
PleI GAGTC 3 cut(s) 239, 422, 432
PpsI GAGTC 3 cut(s) 239, 422, 432
Psp6I CCWGG 1 cut(s) 490
PspGI CCWGG 1 cut(s) 490
PspN4I GGNNCC 1 cut(s) 271
PspPI GGNCC 1 cut(s) 524
PsrI GAACNNNNNNTAC 2 cut(s) 236, 268
RsaI GTAC 1 cut(s) 487
RsaNI GTAC 1 cut(s) 486
RseI CAYNNNNRTG 1 cut(s) 742
SapI GCTCTTC 1 cut(s) 117
SaqAI TTAA 4 cut(s) 62, 87, 123, 309
SatI GCNGC 3 cut(s) 51, 72, 513
Sau3AI GATC 2 cut(s) 36, 156
Sau96I GGNCC 1 cut(s) 524
SchI GAGTC 3 cut(s) 240, 423, 432
ScrFI CCNGG 1 cut(s) 492
SduI GDGCHC 1 cut(s) 220
SetI ASST 8 cut(s) 87, 147, 156, 249, 392, 663, 670, 742
SfaNI GCATC 1 cut(s) 466
SinI GGWCC 1 cut(s) 524
SmiMI CAYNNNNRTG 1 cut(s) 742
Sse9I AATT 3 cut(s) 193, 356, 566
SseBI AGGCCT 1 cut(s) 690
SsiI CCGC 1 cut(s) 50
SspMI CTAG 1 cut(s) 707
StuI AGGCCT 1 cut(s) 690
StyD4I CCNGG 1 cut(s) 490
StyI CCWWGG 1 cut(s) 337
TaaI ACNGT 1 cut(s) 332
TaiI ACGT 1 cut(s) 156
TaqI TCGA 2 cut(s) 229, 576
TasI AATT 3 cut(s) 193, 356, 566
TauI GCSGC 1 cut(s) 53
TfiI GAWTC 1 cut(s) 734
Tru1I TTAA 4 cut(s) 62, 87, 123, 309
Tru9I TTAA 4 cut(s) 62, 87, 123, 309
TscAI CASTG 2 cut(s) 145, 749
TseFI GTSAC 2 cut(s) 140, 205
TseI GCWGC 2 cut(s) 71, 512
Tsp45I GTSAC 2 cut(s) 140, 205
TspDTI ATGAA 2 cut(s) 397, 594
TspGWI ACGGA 1 cut(s) 411
TspRI CASTG 2 cut(s) 145, 749
VneI GTGCAC 1 cut(s) 216
VpaK11BI GGWCC 1 cut(s) 524
XspI CTAG 1 cut(s) 707
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.