RchiOBHm_Chr4g0404291

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Forward (+)
24066804 .. 24067574
771 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ37587

Sequence Viewer

Length: 771 bp
ATGAATCTCCAAGGCACCATTTCCCCTCATGTTGGCAATCTCTCCTTCCTAGTCTCACTTGATCTCTGCAATAACAGCTTCTTGGGGTTCATACCACATGAAATCAGCCGTTTGCATCGCTTGAGGATACTTGTACTTCAAGGTAACAAGTTGGAAGGAAACATCCCTCCAACTTTACAGCTTTGCCACAAGCTCGAGTCTATATCCCTTTCAATAAACAGATTAAGTTGTCTCATACCTAAAGAGTTGGGTTTCCTTCCCAGGGTTTGTAAATTATATCTCGGTGCAAACAATCTCATAGGTGAAATTCCTTCGTCTCTGGGTAACATTTCAACCTTACAAGAATTAAGTCTGGTTGAAAATGGTCTCACAGGTTCATTCCCTTCGGCTCTACTCAACGTATCTATTCTAGCTCTTATTTCCCTATCTGGCAATTACATGTCAGGTAGTCTTCCTGTAGATCTTTGCCGTAATTGGCCTAATACTTATTACATTTCTCTATCTGACAACAAATTCGGTGGCCAACTAACTTTCGGACTAAGCCGATGTAGAGAGCTTGAGATCTTATCTCTGTCATACAATAATTTTATCGGAAGTATTCCGGGAGAAATTGGGAGTTTACAACATCTTAAAACTCTATTTCTTGGTGTCAATAACCTAACTGGTGTTAGTATAGGTACTTGTATTGTTGGCATTCCCTATACAAAACTACTGAGTCCTATGTTAAGAATTGTACTTGAGAAGAATGGAATTGAAATTCAAGATTGGTGA

Protein Analysis

256

Amino Acids

27.96

Weight (kDa)

7.6

Isoelectric Point (pI)

41.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000229)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13780 FvH4_1g13790 FvH4_3g37750
malus_domestica MD00G1192800.v1.1 MD02G1291700.v1.1 MD03G1180500.v1.1 MD03G1181600.v1.1 MD03G1181700.v1.1 MD03G1181900.v1.1 MD03G1182700.v1.1 MD03G1281400.v1.1 MD05G1297800.v1.1 MD05G1298300.v1.1 MD07G1034800.v1.1 MD10G1265200.v1.1 MD10G1277500.v1.1
prunus_persica Prupe.4G063500_v2.0.a1 Prupe.6G160500_v2.0.a1
pyrus_communis pycom04g04980 pycom05g27570 pycom05g27590 pycom10g25090
rosa_chinensis RchiOBHm_Chr2g0113621 RchiOBHm_Chr2g0113671 RchiOBHm_Chr2g0113771 RchiOBHm_Chr2g0113871 RchiOBHm_Chr2g0114031 RchiOBHm_Chr2g0114181 RchiOBHm_Chr2g0114201 RchiOBHm_Chr2g0114231 RchiOBHm_Chr2g0114241 RchiOBHm_Chr4g0403181 RchiOBHm_Chr4g0404251 RchiOBHm_Chr4g0404291 RchiOBHm_Chr4g0404471 RchiOBHm_Chr5g0010961 RchiOBHm_Chr5g0010971 RchiOBHm_Chr5g0010981 RchiOBHm_Chr5g0011131 RchiOBHm_Chr5g0011311 RchiOBHm_Chr5g0011321 RchiOBHm_Chr5g0011361 RchiOBHm_Chr5g0016031 RchiOBHm_Chr5g0040141 RchiOBHm_Chr5g0040411 RchiOBHm_Chr5g0040471 RchiOBHm_Chr5g0059151 RchiOBHm_Chr5g0059191 RchiOBHm_Chr6g0251861 RchiOBHm_Chr7g0213311 RchiOBHm_Chr7g0213321
rosa_laevigata RLG00000009001 RLG00000009062 RLG00000018075 RLG00000018085 RLG00000018097 RLG00000031818 RLG00000034199
rosa_multiflora Rmu_co7972198.1_g000001 Rmu_co8328773.1_g000001 Rmu_sc0000929.1_g000033 Rmu_sc0001023.1_g000056 Rmu_sc0001699.1_g000007 Rmu_sc0003151.1_g000028 Rmu_sc0003242.1_g000010 Rmu_sc0004283.1_g000012 Rmu_sc0004283.1_g000036 Rmu_sc0004283.1_g000048 Rmu_sc0004283.1_g000066 Rmu_sc0005187.1_g000011 Rmu_sc0007010.1_g000008 Rmu_sc0007109.1_g000001 Rmu_sc0008397.1_g000007 Rmu_sc0009151.1_g000001 Rmu_sc0009639.1_g000020 Rmu_sc0009975.1_g000007 Rmu_sc0009975.1_g000010 Rmu_sc0010543.1_g000006 Rmu_sc0011398.1_g000001 Rmu_sc0011941.1_g000025 Rmu_sc0013141.1_g000002 Rmu_sc0016457.1_g000002 Rmu_sc0038501.1_g000001 Rmu_ssc0000303.1_g000008
rosa_roxburghii Rroxscaffold_1G00040180 Rroxscaffold_1G00040280 Rroxscaffold_1G00040900 Rroxscaffold_1G00064830 Rroxscaffold_1G00065410 Rroxscaffold_2G00130010 Rroxscaffold_2G00130040
rosa_rugosa Rorug02G0188500 Rorug02G0188800 Rorug02G0188900 Rorug02G0189500 Rorug04G0458400 Rorug05G0184800
rosa_samantha Rh1CG253300 Rh2CG247500 Rh2CG247600 Rh2CG247900 Rh2CG248300 Rh2CG249100 Rh2CG249400 Rh2CG249800 Rh2CG249900 Rh2CG250000 Rh2CG250100 Rh2CG250200 Rh2CG262700 Rh4AG118100 Rh4AG118300 Rh4AG364100 Rh4BG106900 Rh4CG125100 Rh4DG110100 Rh4DG110500 Rh4DG110600 Rh4DG369800 Rh5CG093500 Rh5CG093600 Rh5CG093700 Rh5CG095300 Rh5CG095500 Rh5CG096100 Rh5CG096200 Rh5CG096400 Rh5CG099600 Rh5CG134600 Rh5CG421300 Rh6DG142900 Rh7AG370200
rosa_wichuraiana Rw0G001470 Rw0G014660 Rw0G017510 Rw0G017750 Rw1G005500 Rw2G018440 Rw2G018460 Rw2G018490 Rw2G019150 Rw4G009550 Rw5G007590 Rw5G007860 Rw6G001510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 14
AcoI YGGCCR 1 cut(s) 520
AcsI RAATTY 3 cut(s) 306, 512, 756
AfaI GTAC 3 cut(s) 135, 679, 735
AfiI CCNNNNNNNGG 2 cut(s) 32, 262
AflIII ACRYGT 1 cut(s) 438
AgsI TTSAA 6 cut(s) 140, 213, 333, 359, 755, 761
AjnI CCWGG 1 cut(s) 260
AluBI AGCT 5 cut(s) 78, 181, 193, 413, 556
AluI AGCT 5 cut(s) 78, 181, 193, 413, 556
Alw26I GTCTC 4 cut(s) 58, 236, 321, 371
Ama87I CYCGRG 1 cut(s) 194
AoxI GGCC 2 cut(s) 476, 520
ApoI RAATTY 3 cut(s) 306, 512, 756
ArsI GACNNNNNNTTYG 2 cut(s) 497, 529
AsuC2I CCSGG 1 cut(s) 603
AsuHPI GGTGA 1 cut(s) 314
AvaI CYCGRG 1 cut(s) 194
BalI TGGCCA 1 cut(s) 522
BanI GGYRCC 1 cut(s) 14
BbsI GAAGAC 1 cut(s) 443
BceAI ACGGC 2 cut(s) 93, 453
BciT130I CCWGG 1 cut(s) 262
BciVI GTATCC 1 cut(s) 120
BcnI CCSGG 1 cut(s) 603
BcoDI GTCTC 4 cut(s) 58, 236, 321, 371
BfaI CTAG 2 cut(s) 50, 410
BfmI CTRYAG 1 cut(s) 456
BfuI GTATCC 1 cut(s) 120
BglII AGATCT 2 cut(s) 460, 561
Bme1390I CCNGG 2 cut(s) 262, 603
BmeT110I CYCGRG 1 cut(s) 194
BmiI GGNNCC 1 cut(s) 16
BmrFI CCNGG 2 cut(s) 262, 603
BmsI GCATC 1 cut(s) 124
BpiI GAAGAC 1 cut(s) 443
BpuEI CTTGAG 3 cut(s) 142, 578, 758
BpuMI CCSGG 1 cut(s) 603
BsaI GGTCTC 1 cut(s) 371
BsaJI CCNNGG 3 cut(s) 10, 260, 261
Bsc4I CCNNNNNNNGG 2 cut(s) 32, 262
Bse1I ACTGG 1 cut(s) 667
BseBI CCWGG 1 cut(s) 262
BseDI CCNNGG 3 cut(s) 10, 260, 261
BseGI GGATG 1 cut(s) 162
BseLI CCNNNNNNNGG 2 cut(s) 32, 262
BseMII CTCAG 1 cut(s) 704
BseNI ACTGG 1 cut(s) 667
BshFI GGCC 2 cut(s) 478, 522
BshNI GGYRCC 1 cut(s) 14
BsiHKCI CYCGRG 1 cut(s) 194
BsiSI CCGG 1 cut(s) 602
BslI CCNNNNNNNGG 2 cut(s) 32, 262
BsmAI GTCTC 4 cut(s) 58, 236, 321, 371
BsmBI CGTCTC 1 cut(s) 321
BsmI GAATGC 1 cut(s) 693
BsnI GGCC 2 cut(s) 478, 522
Bso31I GGTCTC 1 cut(s) 371
BsoBI CYCGRG 1 cut(s) 194
Bsp143I GATC 3 cut(s) 61, 460, 561
BspANI GGCC 2 cut(s) 478, 522
BspCNI CTCAG 1 cut(s) 705
BspLI GGNNCC 1 cut(s) 16
BspT107I GGYRCC 1 cut(s) 14
BspTNI GGTCTC 1 cut(s) 371
BsrI ACTGG 1 cut(s) 667
BssECI CCNNGG 3 cut(s) 10, 260, 261
BssMI GATC 3 cut(s) 61, 460, 561
BssT1I CCWWGG 1 cut(s) 10
Bst2UI CCWGG 1 cut(s) 262
BstDEI CTNAG 2 cut(s) 539, 713
BstF5I GGATG 1 cut(s) 162
BstKTI GATC 3 cut(s) 64, 463, 564
BstMAI GTCTC 4 cut(s) 58, 236, 321, 371
BstMBI GATC 3 cut(s) 61, 460, 561
BstMWI GCNNNNNNNGC 1 cut(s) 75
BstNI CCWGG 1 cut(s) 262
BstNSI RCATGY 1 cut(s) 442
BstSCI CCNGG 2 cut(s) 260, 601
BstSFI CTRYAG 1 cut(s) 456
BstV2I GAAGAC 1 cut(s) 443
BstX2I RGATCY 2 cut(s) 460, 561
BstYI RGATCY 2 cut(s) 460, 561
BsuI GTATCC 1 cut(s) 120
BsuRI GGCC 2 cut(s) 478, 522
BtgZI GCGATG 1 cut(s) 101
BtsCI GGATG 1 cut(s) 162
Csp6I GTAC 3 cut(s) 134, 678, 734
CspCI CAANNNNNGTGG 2 cut(s) 499, 534
CviAII CATG 3 cut(s) 29, 98, 439
CviQI GTAC 3 cut(s) 134, 678, 734
DdeI CTNAG 2 cut(s) 539, 713
DpnI GATC 3 cut(s) 63, 462, 563
DpnII GATC 3 cut(s) 61, 460, 561
EaeI YGGCCR 1 cut(s) 520
Eco130I CCWWGG 1 cut(s) 10
Eco31I GGTCTC 1 cut(s) 371
Eco88I CYCGRG 1 cut(s) 194
EcoRII CCWGG 1 cut(s) 260
EcoT14I CCWWGG 1 cut(s) 10
ErhI CCWWGG 1 cut(s) 10
Esp3I CGTCTC 1 cut(s) 321
FaeI CATG 3 cut(s) 32, 101, 442
FatI CATG 3 cut(s) 28, 97, 438
FokI GGATG 1 cut(s) 149
FspBI CTAG 2 cut(s) 50, 410
HaeIII GGCC 2 cut(s) 478, 522
HapII CCGG 1 cut(s) 602
Hin1II CATG 3 cut(s) 32, 101, 442
HinfI GANTC 3 cut(s) 4, 197, 715
HpaII CCGG 1 cut(s) 602
HphI GGTGA 1 cut(s) 314
Hpy166II GTNNAC 1 cut(s) 620
Hpy188I TCNGA 3 cut(s) 505, 536, 593
Hpy188III TCNNGA 1 cut(s) 761
Hpy8I GTNNAC 1 cut(s) 620
HpyAV CCTTC 5 cut(s) 55, 149, 266, 321, 393
HpyCH4IV ACGT 1 cut(s) 399
HpyCH4V TGCA 3 cut(s) 69, 115, 287
HpyF10VI GCNNNNNNNGC 1 cut(s) 75
HpyF3I CTNAG 2 cut(s) 539, 713
HpySE526I ACGT 1 cut(s) 399
Hsp92II CATG 3 cut(s) 32, 101, 442
Kzo9I GATC 3 cut(s) 61, 460, 561
LweI GCATC 1 cut(s) 124
MaeI CTAG 2 cut(s) 50, 410
MaeII ACGT 1 cut(s) 399
MaeIII GTNAC 2 cut(s) 143, 323
MalI GATC 3 cut(s) 63, 462, 563
MboI GATC 3 cut(s) 61, 460, 561
MboII GAAGA 2 cut(s) 443, 754
MflI RGATCY 2 cut(s) 460, 561
MlsI TGGCCA 1 cut(s) 522
MluNI TGGCCA 1 cut(s) 522
MlyI GAGTC 2 cut(s) 206, 724
MmeI TCCRAC 2 cut(s) 132, 194
MnlI CCTC 3 cut(s) 36, 117, 177
Mox20I TGGCCA 1 cut(s) 522
MscI TGGCCA 1 cut(s) 522
MseI TTAA 4 cut(s) 224, 347, 630, 725
Msp20I TGGCCA 1 cut(s) 522
MspI CCGG 1 cut(s) 602
MspR9I CCNGG 2 cut(s) 262, 603
Mva1269I GAATGC 1 cut(s) 693
MvaI CCWGG 1 cut(s) 262
MwoI GCNNNNNNNGC 1 cut(s) 75
NciI CCSGG 1 cut(s) 603
NdeII GATC 3 cut(s) 61, 460, 561
NlaIII CATG 3 cut(s) 32, 101, 442
NlaIV GGNNCC 1 cut(s) 16
NspI RCATGY 1 cut(s) 442
PaeR7I CTCGAG 1 cut(s) 194
PasI CCCWGGG 1 cut(s) 261
PciI ACATGT 1 cut(s) 438
PctI GAATGC 1 cut(s) 693
PfeI GAWTC 1 cut(s) 4
PfoI TCCNGGA 1 cut(s) 601
PleI GAGTC 2 cut(s) 205, 723
PpsI GAGTC 2 cut(s) 205, 723
PscI ACATGT 1 cut(s) 438
Psp6I CCWGG 1 cut(s) 260
PspGI CCWGG 1 cut(s) 260
PspN4I GGNNCC 1 cut(s) 16
PspXI VCTCGAGB 1 cut(s) 194
PsuI RGATCY 2 cut(s) 460, 561
RsaI GTAC 3 cut(s) 135, 679, 735
RsaNI GTAC 3 cut(s) 134, 678, 734
SaqAI TTAA 4 cut(s) 224, 347, 630, 725
Sau3AI GATC 3 cut(s) 61, 460, 561
SchI GAGTC 2 cut(s) 206, 724
ScrFI CCNGG 2 cut(s) 262, 603
SfaNI GCATC 1 cut(s) 124
SfcI CTRYAG 1 cut(s) 456
Sfr274I CTCGAG 1 cut(s) 194
SlaI CTCGAG 1 cut(s) 194
SmlI CTYRAG 4 cut(s) 121, 194, 557, 737
SmoI CTYRAG 4 cut(s) 121, 194, 557, 737
SspMI CTAG 2 cut(s) 50, 410
StyD4I CCNGG 2 cut(s) 260, 601
StyI CCWWGG 1 cut(s) 10
TaiI ACGT 1 cut(s) 402
TaqI TCGA 1 cut(s) 195
TatI WGTACW 2 cut(s) 133, 733
TfiI GAWTC 1 cut(s) 4
Tru1I TTAA 4 cut(s) 224, 347, 630, 725
Tru9I TTAA 4 cut(s) 224, 347, 630, 725
TspDTI ATGAA 4 cut(s) 17, 79, 114, 366
XapI RAATTY 3 cut(s) 306, 512, 756
XceI RCATGY 1 cut(s) 442
XhoI CTCGAG 1 cut(s) 194
XspI CTAG 2 cut(s) 50, 410
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.