RLG00000018075

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
25064704 .. 25065992
1289 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000018075

Sequence Viewer

Length: 816 bp
ATGTGTGTTGATTTTTCAGAAATTCCAAATGAAATCGGCACTTTGAATCAGTTGGAAGAGTTGTTTGTGCAAAATAATGCCTTAAAAGGGCCTATTCCTATGGTTGTCTTCAATATGTCATCCTTGACCAGAGTAACTTTCTATGGAAACAAGTTGAGATCACCACCAAGGTCCCCGTTCTTCTTCCCACTGCCGGCCAAGTCCTCCACATCCACTGCTGGAACCGCTGTCAAGGTCGCCGCTGTCGTACCAAAATCGAAGGCGAAGGCGAAGCCCAAAGCAGACGCTGATGCGGTCAAGCCCAAGAGAAACGTCAACAGGAACGCTGGCATTCTGAAGCCGAACTTCCCGATCTTCACCAAGGACTCTGCCGCCACCGCCATTATCAACCTCCACCACCTCGCCACCTCACAACAACCGCTCATTGACCGTGAAAACCTTAAGTCTGAGCATTCTCATTATCATCGTCGTCGTCACCATCGTCGCCTCATTCTCCCTCTGCCTAATCCAACAACCGCTTCCTTCACCATGTCACTGCCTCTTTCAGCGACGACTCCCCCGCCCGAGTATCTCCTGTCGAATCCACTGCCGCTGCCGATCCTGTCGCCTCGCTCCCGATCTTCACCTTCTCCGCCATCAAGCACCGTCGAGCCTCCTCCACTGCTGTCGTCTCCGCCGACTGCGCCGTCTGCCTCTCGAAGTTCGTGCACGACAACCAGCTCTGGCTACTCCCTCTCTGCTGTCACGCATTCCACGTATCGTGCATCGACACGTGGCTCTACTCCCAGTGCACTTGCAGGCTCTGCCGGTCGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

272

Amino Acids

29.07

Weight (kDa)

10.51

Isoelectric Point (pI)

70.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000229)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13780 FvH4_1g13790 FvH4_3g37750
malus_domestica MD00G1192800.v1.1 MD02G1291700.v1.1 MD03G1180500.v1.1 MD03G1181600.v1.1 MD03G1181700.v1.1 MD03G1181900.v1.1 MD03G1182700.v1.1 MD03G1281400.v1.1 MD05G1297800.v1.1 MD05G1298300.v1.1 MD07G1034800.v1.1 MD10G1265200.v1.1 MD10G1277500.v1.1
prunus_persica Prupe.4G063500_v2.0.a1 Prupe.6G160500_v2.0.a1
pyrus_communis pycom04g04980 pycom05g27570 pycom05g27590 pycom10g25090
rosa_chinensis RchiOBHm_Chr2g0113621 RchiOBHm_Chr2g0113671 RchiOBHm_Chr2g0113771 RchiOBHm_Chr2g0113871 RchiOBHm_Chr2g0114031 RchiOBHm_Chr2g0114181 RchiOBHm_Chr2g0114201 RchiOBHm_Chr2g0114231 RchiOBHm_Chr2g0114241 RchiOBHm_Chr4g0403181 RchiOBHm_Chr4g0404251 RchiOBHm_Chr4g0404291 RchiOBHm_Chr4g0404471 RchiOBHm_Chr5g0010961 RchiOBHm_Chr5g0010971 RchiOBHm_Chr5g0010981 RchiOBHm_Chr5g0011131 RchiOBHm_Chr5g0011311 RchiOBHm_Chr5g0011321 RchiOBHm_Chr5g0011361 RchiOBHm_Chr5g0016031 RchiOBHm_Chr5g0040141 RchiOBHm_Chr5g0040411 RchiOBHm_Chr5g0040471 RchiOBHm_Chr5g0059151 RchiOBHm_Chr5g0059191 RchiOBHm_Chr6g0251861 RchiOBHm_Chr7g0213311 RchiOBHm_Chr7g0213321
rosa_laevigata RLG00000009001 RLG00000009062 RLG00000018075 RLG00000018085 RLG00000018097 RLG00000031818 RLG00000034199
rosa_multiflora Rmu_co7972198.1_g000001 Rmu_co8328773.1_g000001 Rmu_sc0000929.1_g000033 Rmu_sc0001023.1_g000056 Rmu_sc0001699.1_g000007 Rmu_sc0003151.1_g000028 Rmu_sc0003242.1_g000010 Rmu_sc0004283.1_g000012 Rmu_sc0004283.1_g000036 Rmu_sc0004283.1_g000048 Rmu_sc0004283.1_g000066 Rmu_sc0005187.1_g000011 Rmu_sc0007010.1_g000008 Rmu_sc0007109.1_g000001 Rmu_sc0008397.1_g000007 Rmu_sc0009151.1_g000001 Rmu_sc0009639.1_g000020 Rmu_sc0009975.1_g000007 Rmu_sc0009975.1_g000010 Rmu_sc0010543.1_g000006 Rmu_sc0011398.1_g000001 Rmu_sc0011941.1_g000025 Rmu_sc0013141.1_g000002 Rmu_sc0016457.1_g000002 Rmu_sc0038501.1_g000001 Rmu_ssc0000303.1_g000008
rosa_roxburghii Rroxscaffold_1G00040180 Rroxscaffold_1G00040280 Rroxscaffold_1G00040900 Rroxscaffold_1G00064830 Rroxscaffold_1G00065410 Rroxscaffold_2G00130010 Rroxscaffold_2G00130040
rosa_rugosa Rorug02G0188500 Rorug02G0188800 Rorug02G0188900 Rorug02G0189500 Rorug04G0458400 Rorug05G0184800
rosa_samantha Rh1CG253300 Rh2CG247500 Rh2CG247600 Rh2CG247900 Rh2CG248300 Rh2CG249100 Rh2CG249400 Rh2CG249800 Rh2CG249900 Rh2CG250000 Rh2CG250100 Rh2CG250200 Rh2CG262700 Rh4AG118100 Rh4AG118300 Rh4AG364100 Rh4BG106900 Rh4CG125100 Rh4DG110100 Rh4DG110500 Rh4DG110600 Rh4DG369800 Rh5CG093500 Rh5CG093600 Rh5CG093700 Rh5CG095300 Rh5CG095500 Rh5CG096100 Rh5CG096200 Rh5CG096400 Rh5CG099600 Rh5CG134600 Rh5CG421300 Rh6DG142900 Rh7AG370200
rosa_wichuraiana Rw0G001470 Rw0G014660 Rw0G017510 Rw0G017750 Rw1G005500 Rw2G018440 Rw2G018460 Rw2G018490 Rw2G019150 Rw4G009550 Rw5G007590 Rw5G007860 Rw6G001510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 685
AccBSI CCGCTC 1 cut(s) 421
AclWI GGATC 1 cut(s) 592
AcoI YGGCCR 1 cut(s) 195
AcsI RAATTY 1 cut(s) 21
AcuI CTGAAG 1 cut(s) 356
AcvI CACGTG 1 cut(s) 773
AfaI GTAC 1 cut(s) 249
AfiI CCNNNNNNNGG 2 cut(s) 87, 193
AflII CTTAAG 1 cut(s) 440
AflIII ACRYGT 1 cut(s) 770
AgsI TTSAA 2 cut(s) 46, 112
AjuI GAANNNNNNNTTGG 2 cut(s) 502, 534
AluBI AGCT 1 cut(s) 720
AluI AGCT 1 cut(s) 720
Alw21I GWGCWC 2 cut(s) 710, 793
Alw26I GTCTC 1 cut(s) 675
Alw44I GTGCAC 2 cut(s) 706, 789
AlwI GGATC 1 cut(s) 592
AlwNI CAGNNNCTG 2 cut(s) 287, 803
Ama87I CYCGRG 1 cut(s) 563
AoxI GGCC 2 cut(s) 89, 195
ApaLI GTGCAC 2 cut(s) 706, 789
ApeKI GCWGC 1 cut(s) 592
ApoI RAATTY 1 cut(s) 21
AspLEI GCGC 1 cut(s) 685
AspS9I GGNCC 2 cut(s) 89, 171
AsuHPI GGTGA 5 cut(s) 153, 349, 467, 517, 615
AvaI CYCGRG 1 cut(s) 563
AvaII GGWCC 1 cut(s) 171
BaeGI GKGCMC 2 cut(s) 710, 793
BbrPI CACGTG 1 cut(s) 773
BbsI GAAGAC 1 cut(s) 100
Bbv12I GWGCWC 2 cut(s) 710, 793
BbvI GCAGC 1 cut(s) 579
BccI CCATC 2 cut(s) 486, 643
BceAI ACGGC 1 cut(s) 670
BcgI CGANNNNNNTGC 4 cut(s) 568, 602, 687, 721
BcoDI GTCTC 1 cut(s) 675
BfrI CTTAAG 1 cut(s) 440
BisI GCNGC 4 cut(s) 240, 372, 590, 593
BlsI GCNGC 4 cut(s) 241, 373, 591, 594
Bme18I GGWCC 1 cut(s) 171
BmeT110I CYCGRG 1 cut(s) 563
BmgT120I GGNCC 2 cut(s) 89, 171
BmiI GGNNCC 2 cut(s) 173, 223
BmrI ACTGGG 1 cut(s) 780
BmsI GCATC 2 cut(s) 280, 773
BmuI ACTGGG 1 cut(s) 780
BpiI GAAGAC 1 cut(s) 100
BsaAI YACGTR 2 cut(s) 756, 773
BsaJI CCNNGG 2 cut(s) 167, 360
Bsc4I CCNNNNNNNGG 2 cut(s) 87, 193
Bse118I RCCGGY 2 cut(s) 193, 806
Bse1I ACTGG 1 cut(s) 786
BseDI CCNNGG 2 cut(s) 167, 360
BseGI GGATG 2 cut(s) 119, 209
BseLI CCNNNNNNNGG 2 cut(s) 87, 193
BseMII CTCAG 1 cut(s) 438
BseNI ACTGG 1 cut(s) 786
BseRI GAGGAG 1 cut(s) 645
BseSI GKGCMC 2 cut(s) 710, 793
BseXI GCAGC 1 cut(s) 579
Bsh1285I CGRYCG 1 cut(s) 811
BshFI GGCC 2 cut(s) 91, 197
BsiEI CGRYCG 1 cut(s) 811
BsiHKAI GWGCWC 2 cut(s) 710, 793
BsiHKCI CYCGRG 1 cut(s) 563
BsiSI CCGG 2 cut(s) 194, 807
BslFI GGGAC 1 cut(s) 157
BslI CCNNNNNNNGG 2 cut(s) 87, 193
BsmAI GTCTC 1 cut(s) 675
BsmBI CGTCTC 1 cut(s) 675
BsmFI GGGAC 1 cut(s) 157
BsmI GAATGC 3 cut(s) 330, 451, 748
BsnI GGCC 2 cut(s) 91, 197
BsoBI CYCGRG 1 cut(s) 563
Bsp1286I GDGCHC 2 cut(s) 710, 793
Bsp143I GATC 4 cut(s) 158, 351, 597, 617
BspANI GGCC 2 cut(s) 91, 197
BspCNI CTCAG 1 cut(s) 439
BspLI GGNNCC 2 cut(s) 173, 223
BspPI GGATC 1 cut(s) 592
BspTI CTTAAG 1 cut(s) 440
BsrBI CCGCTC 1 cut(s) 421
BsrFI RCCGGY 2 cut(s) 193, 806
BsrI ACTGG 1 cut(s) 786
BssAI RCCGGY 2 cut(s) 193, 806
BssECI CCNNGG 2 cut(s) 167, 360
BssMI GATC 4 cut(s) 158, 351, 597, 617
BssT1I CCWWGG 2 cut(s) 167, 360
Bst4CI ACNGT 2 cut(s) 431, 646
Bst6I CTCTTC 1 cut(s) 51
BstAFI CTTAAG 1 cut(s) 440
BstAPI GCANNNNNTGC 1 cut(s) 803
BstBAI YACGTR 2 cut(s) 756, 773
BstC8I GCNNGC 3 cut(s) 195, 328, 799
BstDEI CTNAG 1 cut(s) 447
BstF5I GGATG 2 cut(s) 119, 209
BstHHI GCGC 1 cut(s) 685
BstKTI GATC 4 cut(s) 161, 354, 600, 620
BstMAI GTCTC 1 cut(s) 675
BstMBI GATC 4 cut(s) 158, 351, 597, 617
BstMCI CGRYCG 1 cut(s) 811
BstMWI GCNNNNNNNGC 5 cut(s) 224, 377, 682, 689, 803
BstSLI GKGCMC 2 cut(s) 710, 793
BstV1I GCAGC 1 cut(s) 579
BstV2I GAAGAC 1 cut(s) 100
BsuRI GGCC 2 cut(s) 91, 197
BtsCI GGATG 2 cut(s) 119, 209
BtsI GCAGTG 5 cut(s) 188, 213, 533, 584, 659
BtsIMutI CAGTG 6 cut(s) 188, 213, 533, 584, 659, 793
Cac8I GCNNGC 3 cut(s) 195, 328, 799
CaiI CAGNNNCTG 2 cut(s) 287, 803
CfoI GCGC 1 cut(s) 685
Cfr10I RCCGGY 2 cut(s) 193, 806
Cfr13I GGNCC 2 cut(s) 89, 171
CseI GACGC 1 cut(s) 293
Csp6I GTAC 1 cut(s) 248
CviAII CATG 1 cut(s) 529
CviQI GTAC 1 cut(s) 248
DdeI CTNAG 1 cut(s) 447
DpnI GATC 4 cut(s) 160, 353, 599, 619
DpnII GATC 4 cut(s) 158, 351, 597, 617
DrdI GACNNNNNNGTC 1 cut(s) 685
DseDI GACNNNNNNGTC 1 cut(s) 685
EaeI YGGCCR 1 cut(s) 195
Eam1104I CTCTTC 1 cut(s) 51
EarI CTCTTC 1 cut(s) 51
EciI GGCGGA 2 cut(s) 621, 663
Eco130I CCWWGG 2 cut(s) 167, 360
Eco47I GGWCC 1 cut(s) 171
Eco57I CTGAAG 1 cut(s) 356
Eco72I CACGTG 1 cut(s) 773
Eco88I CYCGRG 1 cut(s) 563
EcoO109I RGGNCCY 2 cut(s) 89, 171
EcoT14I CCWWGG 2 cut(s) 167, 360
ErhI CCWWGG 2 cut(s) 167, 360
Esp3I CGTCTC 1 cut(s) 675
FaeI CATG 1 cut(s) 532
FaiI YATR 4 cut(s) 101, 116, 144, 530
FalI AAGNNNNNCTT 2 cut(s) 329, 361
FaqI GGGAC 1 cut(s) 157
FatI CATG 1 cut(s) 528
FauI CCCGC 1 cut(s) 567
Fnu4HI GCNGC 4 cut(s) 240, 372, 590, 593
FokI GGATG 2 cut(s) 106, 196
Fsp4HI GCNGC 4 cut(s) 240, 372, 590, 593
GlaI GCGC 1 cut(s) 684
GluI GCNGC 4 cut(s) 240, 372, 590, 593
HaeIII GGCC 2 cut(s) 91, 197
HapII CCGG 2 cut(s) 194, 807
HgaI GACGC 1 cut(s) 293
HhaI GCGC 1 cut(s) 685
Hin1II CATG 1 cut(s) 532
Hin6I GCGC 1 cut(s) 683
HinP1I GCGC 1 cut(s) 683
HincII GTYRAC 1 cut(s) 316
HindII GTYRAC 1 cut(s) 316
HinfI GANTC 4 cut(s) 46, 365, 553, 580
HpaII CCGG 2 cut(s) 194, 807
HphI GGTGA 5 cut(s) 153, 349, 467, 517, 615
Hpy166II GTNNAC 3 cut(s) 316, 708, 791
Hpy188I TCNGA 3 cut(s) 19, 336, 448
Hpy188III TCNNGA 3 cut(s) 349, 615, 696
Hpy8I GTNNAC 3 cut(s) 316, 708, 791
Hpy99I CGWCG 5 cut(s) 471, 474, 486, 553, 650
HpyAV CCTTC 4 cut(s) 253, 259, 532, 636
HpyCH4III ACNGT 2 cut(s) 431, 646
HpyCH4IV ACGT 3 cut(s) 312, 755, 772
HpyCH4V TGCA 5 cut(s) 70, 708, 764, 791, 797
HpyF10VI GCNNNNNNNGC 5 cut(s) 224, 377, 682, 689, 803
HpyF3I CTNAG 1 cut(s) 447
HpySE526I ACGT 3 cut(s) 312, 755, 772
Hsp92II CATG 1 cut(s) 532
HspAI GCGC 1 cut(s) 683
KroI GCCGGC 1 cut(s) 193
KroNI GCCGGC 1 cut(s) 195
Kzo9I GATC 4 cut(s) 158, 351, 597, 617
LmnI GCTCC 1 cut(s) 617
Lsp1109I GCAGC 1 cut(s) 579
LweI GCATC 2 cut(s) 280, 773
MaeII ACGT 3 cut(s) 312, 755, 772
MaeIII GTNAC 4 cut(s) 133, 473, 531, 742
MalI GATC 4 cut(s) 160, 353, 599, 619
MbiI CCGCTC 1 cut(s) 421
MboI GATC 4 cut(s) 158, 351, 597, 617
MboII GAAGA 6 cut(s) 68, 100, 172, 175, 346, 612
MhlI GDGCHC 2 cut(s) 710, 793
MluCI AATT 1 cut(s) 21
MlyI GAGTC 2 cut(s) 359, 547
MmeI TCCRAC 2 cut(s) 33, 533
MroNI GCCGGC 1 cut(s) 193
MseI TTAA 2 cut(s) 83, 441
MspA1I CMGCKG 3 cut(s) 227, 242, 592
MspCI CTTAAG 1 cut(s) 440
MspI CCGG 2 cut(s) 194, 807
Mva1269I GAATGC 3 cut(s) 330, 451, 748
MwoI GCNNNNNNNGC 5 cut(s) 224, 377, 682, 689, 803
NaeI GCCGGC 1 cut(s) 195
NdeII GATC 4 cut(s) 158, 351, 597, 617
NgoMIV GCCGGC 1 cut(s) 193
NlaIII CATG 1 cut(s) 532
NlaIV GGNNCC 2 cut(s) 173, 223
NmuCI GTSAC 3 cut(s) 473, 531, 742
PcsI WCGNNNNNNNCGW 4 cut(s) 243, 478, 674, 752
PctI GAATGC 3 cut(s) 330, 451, 748
PdiI GCCGGC 1 cut(s) 195
PfeI GAWTC 2 cut(s) 46, 580
PkrI GCNGC 4 cut(s) 241, 373, 591, 594
PleI GAGTC 2 cut(s) 359, 547
PmaCI CACGTG 1 cut(s) 773
PmlI CACGTG 1 cut(s) 773
PpsI GAGTC 2 cut(s) 359, 547
Ppu21I YACGTR 2 cut(s) 756, 773
PpuMI RGGWCCY 1 cut(s) 171
Psp5II RGGWCCY 1 cut(s) 171
PspCI CACGTG 1 cut(s) 773
PspN4I GGNNCC 2 cut(s) 173, 223
PspPI GGNCC 2 cut(s) 89, 171
PspPPI RGGWCCY 1 cut(s) 171
PstNI CAGNNNCTG 2 cut(s) 287, 803
RsaI GTAC 1 cut(s) 249
RsaNI GTAC 1 cut(s) 248
SaqAI TTAA 2 cut(s) 83, 441
SatI GCNGC 4 cut(s) 240, 372, 590, 593
Sau3AI GATC 4 cut(s) 158, 351, 597, 617
Sau96I GGNCC 2 cut(s) 89, 171
SchI GAGTC 2 cut(s) 359, 547
SduI GDGCHC 2 cut(s) 710, 793
SfaNI GCATC 2 cut(s) 280, 773
SinI GGWCC 1 cut(s) 171
SmlI CTYRAG 1 cut(s) 440
SmoI CTYRAG 1 cut(s) 440
Sse9I AATT 1 cut(s) 21
StyI CCWWGG 2 cut(s) 167, 360
TaaI ACNGT 2 cut(s) 431, 646
TaiI ACGT 3 cut(s) 315, 758, 775
TaqI TCGA 5 cut(s) 257, 578, 648, 697, 767
TasI AATT 1 cut(s) 21
TauI GCSGC 3 cut(s) 242, 374, 592
TfiI GAWTC 2 cut(s) 46, 580
Tru1I TTAA 2 cut(s) 83, 441
Tru9I TTAA 2 cut(s) 83, 441
TscAI CASTG 6 cut(s) 195, 220, 540, 591, 666, 793
TseFI GTSAC 3 cut(s) 473, 531, 742
TseI GCWGC 1 cut(s) 592
Tsp45I GTSAC 3 cut(s) 473, 531, 742
TspDTI ATGAA 1 cut(s) 45
TspRI CASTG 6 cut(s) 195, 220, 540, 591, 666, 793
Vha464I CTTAAG 1 cut(s) 440
VneI GTGCAC 2 cut(s) 706, 789
VpaK11BI GGWCC 1 cut(s) 171
XapI RAATTY 1 cut(s) 21
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.