Rw6G001510

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000229
Physical Location & Seq
Forward (+)
2375657 .. 2378869
3213 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G001510.1

Sequence Viewer

Length: 1692 bp
ATGGCAGCACAAACCAACCTTAACATCACCACAGACCGGTCTGCACTTCTTGCTCTAAAAGTCCATATCACAAGTGACCCTCAAAACATGATCTTTACCAATTGGTCAACCACCACCCCTGTTTGCAACTGGGTTGGCATCATTTGTAGTGCACGCCATCATCGAGTCACAGAGTTGAACATCTCTTACTTTGGTCTCGCGGGCACCATTCCTCCTGAGTTAGGCAACTTATCATTGCTTGTTGATCTGAACATCCAAAATAACAGTTTCCAGGGTACCTTACCTGACGAATTGGCTCGCTTGCGCCGGTTGAAGTTTATTAACTTGGGATACAACAAGTTTATGGGAGTGATACCTTCATGGTTTGGGTCCTTGTCCAAACTTCAAGGATTCAGGTTGTTTGGTAATCAATTTACAGGTTCCATACCAACTACCATCTTCAACTTATCTGCTTTGCAAGTAATTGATCTGCGTTATAACCAACTCTCAGGCAAAATCTCCAGAGAAATCAGAAACCTAACAACGTTGAAGGCGATCAACCTTGATTATAATAATTTTATAGAGATTCCAAATGAGATTGGCACCTTGAATCAGCTAGAAATGTTGTTTGTGCAAGAAAATGCCTTAAAGGGGCCTATTCCTGTGGGTGTCTTCAATATGTCATCTTTGACTGTTGTAACTTTCTATGGAAACAACTTGAATGGTAGAATTCCTGACAAAATTTGTCAACATCTTCCAAATATTCAAGAGTTGGATTTAGCTATCAATCAGTTTGATGGTCCACTTCCTTCCAAGTTATGGCAATGCAAACAACTTCTTTTATTAGACTTGGGGGAGAACAAGTTTAGTGGAAGAATACCCAAATATATTGGGAACTTAACGCAGATAAAGAGGATTGGGCTTGACACCAACAGGTTAACAGGTACTATACCATATGAATTTGGTTATCTTCCAAATTTAGAGGGGTTGTCGCTCATGGATAATAATCTAAATGGTCATATCCCATCCTCAATCTTCAATATCTCCACAATAAAAGAATTATATCTCGGCATCAATCAGCTTTCAGGTAGCCTCCCAGCAAACATAGGCCTTGGGCTTCCAAACGTAGAACAATTTCAAGTAGCAGCGAATCACCTCAGTGGAGTAATCCCCAAATCCATTTCCAATGCTTCTGAGCTTCAGCTTCTAGAACTGGGAGGTAACTCTTTTTCAGGATTTATTCCAAGCACTCTGTGCCTCTTGACAAACCTTGAGTGGCTCGGATTGTTCAACAACAATTTGACCATTGATACCTCTACTCCAGAAGTTAATATTTTGTCTTGTCTGGCAAATCTTAGAAATTTGAGGCGTTTAGCCTTCTCAAGCAATCCATTAAATGCCAAGCTTTCCTTCAGCAATTTCTCTGCATCACTTCAATATCTTCAGTTAGGAAACTGCAGCTTGAGAGGTAACATCCCCAGTGATATAGGCAACTTAAGTAGCTTGATAGTTTTAGACCTCGAAAACAATCAATTGAGCGGCCCAATTCCAGGCTCAATGGGAAGACTACTGAATCTTCAAGGTTTGCGTATGCATTATAACACATTGCAAGGATACATTCCAGATGAACTTTGTCAACTAGAAAACTTGGTTGATTTGTTTTGGGTGGGAATCAACTCTCTGATTCTATACCTTCCTGCTTGGGTAATCTAA

Protein Analysis

563

Amino Acids

62.3

Weight (kDa)

6.4

Isoelectric Point (pI)

33.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 11 - 50 4.1e-09 Leucine rich repeat N-terminal domain
LRR_8 PF13855 107 - 162 7.6e-06 Leucine rich repeat
LRR_8 PF13855 142 - 186 6.8e-06 Leucine rich repeat
LRR_14 PF23598 147 - 254 6.9e-10 Leucine-rich repeat region
LRR_8 PF13855 367 - 427 5.2e-07 Leucine rich repeat
LRR_14 PF23598 432 - 547 1.3e-08 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000229)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13780 FvH4_1g13790 FvH4_3g37750
malus_domestica MD00G1192800.v1.1 MD02G1291700.v1.1 MD03G1180500.v1.1 MD03G1181600.v1.1 MD03G1181700.v1.1 MD03G1181900.v1.1 MD03G1182700.v1.1 MD03G1281400.v1.1 MD05G1297800.v1.1 MD05G1298300.v1.1 MD07G1034800.v1.1 MD10G1265200.v1.1 MD10G1277500.v1.1
prunus_persica Prupe.4G063500_v2.0.a1 Prupe.6G160500_v2.0.a1
pyrus_communis pycom04g04980 pycom05g27570 pycom05g27590 pycom10g25090
rosa_chinensis RchiOBHm_Chr2g0113621 RchiOBHm_Chr2g0113671 RchiOBHm_Chr2g0113771 RchiOBHm_Chr2g0113871 RchiOBHm_Chr2g0114031 RchiOBHm_Chr2g0114181 RchiOBHm_Chr2g0114201 RchiOBHm_Chr2g0114231 RchiOBHm_Chr2g0114241 RchiOBHm_Chr4g0403181 RchiOBHm_Chr4g0404251 RchiOBHm_Chr4g0404291 RchiOBHm_Chr4g0404471 RchiOBHm_Chr5g0010961 RchiOBHm_Chr5g0010971 RchiOBHm_Chr5g0010981 RchiOBHm_Chr5g0011131 RchiOBHm_Chr5g0011311 RchiOBHm_Chr5g0011321 RchiOBHm_Chr5g0011361 RchiOBHm_Chr5g0016031 RchiOBHm_Chr5g0040141 RchiOBHm_Chr5g0040411 RchiOBHm_Chr5g0040471 RchiOBHm_Chr5g0059151 RchiOBHm_Chr5g0059191 RchiOBHm_Chr6g0251861 RchiOBHm_Chr7g0213311 RchiOBHm_Chr7g0213321
rosa_laevigata RLG00000009001 RLG00000009062 RLG00000018075 RLG00000018085 RLG00000018097 RLG00000031818 RLG00000034199
rosa_multiflora Rmu_co7972198.1_g000001 Rmu_co8328773.1_g000001 Rmu_sc0000929.1_g000033 Rmu_sc0001023.1_g000056 Rmu_sc0001699.1_g000007 Rmu_sc0003151.1_g000028 Rmu_sc0003242.1_g000010 Rmu_sc0004283.1_g000012 Rmu_sc0004283.1_g000036 Rmu_sc0004283.1_g000048 Rmu_sc0004283.1_g000066 Rmu_sc0005187.1_g000011 Rmu_sc0007010.1_g000008 Rmu_sc0007109.1_g000001 Rmu_sc0008397.1_g000007 Rmu_sc0009151.1_g000001 Rmu_sc0009639.1_g000020 Rmu_sc0009975.1_g000007 Rmu_sc0009975.1_g000010 Rmu_sc0010543.1_g000006 Rmu_sc0011398.1_g000001 Rmu_sc0011941.1_g000025 Rmu_sc0013141.1_g000002 Rmu_sc0016457.1_g000002 Rmu_sc0038501.1_g000001 Rmu_ssc0000303.1_g000008
rosa_roxburghii Rroxscaffold_1G00040180 Rroxscaffold_1G00040280 Rroxscaffold_1G00040900 Rroxscaffold_1G00064830 Rroxscaffold_1G00065410 Rroxscaffold_2G00130010 Rroxscaffold_2G00130040
rosa_rugosa Rorug02G0188500 Rorug02G0188800 Rorug02G0188900 Rorug02G0189500 Rorug04G0458400 Rorug05G0184800
rosa_samantha Rh1CG253300 Rh2CG247500 Rh2CG247600 Rh2CG247900 Rh2CG248300 Rh2CG249100 Rh2CG249400 Rh2CG249800 Rh2CG249900 Rh2CG250000 Rh2CG250100 Rh2CG250200 Rh2CG262700 Rh4AG118100 Rh4AG118300 Rh4AG364100 Rh4BG106900 Rh4CG125100 Rh4DG110100 Rh4DG110500 Rh4DG110600 Rh4DG369800 Rh5CG093500 Rh5CG093600 Rh5CG093700 Rh5CG095300 Rh5CG095500 Rh5CG096100 Rh5CG096200 Rh5CG096400 Rh5CG099600 Rh5CG134600 Rh5CG421300 Rh6DG142900 Rh7AG370200
rosa_wichuraiana Rw0G001470 Rw0G014660 Rw0G017510 Rw0G017750 Rw1G005500 Rw2G018440 Rw2G018460 Rw2G018490 Rw2G019150 Rw4G009550 Rw5G007590 Rw5G007860 Rw6G001510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 477, 549, 1578
Acc65I GGTACC 1 cut(s) 275
AccB1I GGYRCC 3 cut(s) 203, 275, 581
AccB7I CCANNNNNTGG 1 cut(s) 798
AccBSI CCGCTC 1 cut(s) 1518
AccII CGCG 1 cut(s) 200
AciI CCGC 2 cut(s) 200, 1518
AclI AACGTT 1 cut(s) 524
AcsI RAATTY 5 cut(s) 708, 720, 938, 955, 1339
AcuI CTGAAG 3 cut(s) 1163, 1375, 1406
AdeI CACNNNGTG 1 cut(s) 1233
AfaI GTAC 2 cut(s) 277, 925
AfiI CCNNNNNNNGG 5 cut(s) 36, 221, 630, 798, 1529
AflII CTTAAG 1 cut(s) 1474
AgeI ACCGGT 1 cut(s) 36
AjnI CCWGG 2 cut(s) 270, 1528
AjuI GAANNNNNNNTTGG 2 cut(s) 1373, 1405
AleI CACNNNNGTG 1 cut(s) 1137
AluBI AGCT 8 cut(s) 595, 761, 1060, 1177, 1183, 1384, 1440, 1482
AluI AGCT 8 cut(s) 595, 761, 1060, 1177, 1183, 1384, 1440, 1482
Alw21I GWGCWC 1 cut(s) 154
Alw26I GTCTC 1 cut(s) 200
Alw44I GTGCAC 1 cut(s) 150
AoxI GGCC 3 cut(s) 632, 1087, 1519
ApaLI GTGCAC 1 cut(s) 150
ApeKI GCWGC 3 cut(s) 5, 1124, 1437
ApoI RAATTY 5 cut(s) 708, 720, 938, 955, 1339
AsiGI ACCGGT 1 cut(s) 36
Asp700I GAANNNNTTC 1 cut(s) 1113
Asp718I GGTACC 1 cut(s) 275
AspLEI GCGC 1 cut(s) 306
AspS9I GGNCC 4 cut(s) 369, 632, 779, 1520
AsuHPI GGTGA 2 cut(s) 19, 1124
AvaII GGWCC 2 cut(s) 369, 779
BaeGI GKGCMC 2 cut(s) 154, 206
BanI GGYRCC 3 cut(s) 203, 275, 581
BbsI GAAGAC 2 cut(s) 643, 1549
Bbv12I GWGCWC 1 cut(s) 154
BbvI GCAGC 3 cut(s) 17, 1136, 1449
BccI CCATC 4 cut(s) 165, 443, 770, 1012
BciT130I CCWGG 2 cut(s) 272, 1530
BciVI GTATCC 2 cut(s) 323, 1586
BcoDI GTCTC 1 cut(s) 200
BfaI CTAG 3 cut(s) 596, 1187, 1619
BfmI CTRYAG 1 cut(s) 1435
BfrI CTTAAG 1 cut(s) 1474
BfuI GTATCC 2 cut(s) 323, 1586
BisI GCNGC 4 cut(s) 6, 1125, 1438, 1519
BlsI GCNGC 4 cut(s) 7, 1126, 1439, 1520
Bme1390I CCNGG 2 cut(s) 272, 1530
Bme18I GGWCC 2 cut(s) 369, 779
BmgT120I GGNCC 4 cut(s) 369, 632, 779, 1520
BmiI GGNNCC 6 cut(s) 205, 277, 370, 421, 583, 633
BmrFI CCNGG 2 cut(s) 272, 1530
BmrI ACTGGG 3 cut(s) 139, 1202, 1452
BmsI GCATC 3 cut(s) 147, 1059, 1415
BmuI ACTGGG 3 cut(s) 139, 1202, 1452
BpiI GAAGAC 2 cut(s) 643, 1549
BpmI CTGGAG 2 cut(s) 484, 1284
BpuEI CTTGAG 3 cut(s) 1271, 1345, 1462
BsaBI GATNNNNATC 1 cut(s) 984
BsaI GGTCTC 1 cut(s) 200
BsaJI CCNNGG 2 cut(s) 271, 1090
BsaWI WCCGGW 1 cut(s) 36
BsaXI ACNNNNNCTCC 6 cut(s) 196, 226, 827, 857, 1282, 1312
Bsc4I CCNNNNNNNGG 5 cut(s) 36, 221, 630, 798, 1529
Bse118I RCCGGY 2 cut(s) 36, 306
Bse1I ACTGG 3 cut(s) 134, 1197, 1458
Bse3DI GCAATG 3 cut(s) 233, 809, 1583
Bse8I GATNNNNATC 1 cut(s) 984
BseBI CCWGG 2 cut(s) 272, 1530
BseDI CCNNGG 2 cut(s) 271, 1090
BseGI GGATG 3 cut(s) 252, 1004, 1452
BseJI GATNNNNATC 1 cut(s) 984
BseLI CCNNNNNNNGG 5 cut(s) 36, 221, 630, 798, 1529
BseMI GCAATG 3 cut(s) 233, 809, 1583
BseMII CTCAG 4 cut(s) 207, 501, 1150, 1164
BseNI ACTGG 3 cut(s) 134, 1197, 1458
BseSI GKGCMC 2 cut(s) 154, 206
BseXI GCAGC 3 cut(s) 17, 1136, 1449
BseYI CCCAGC 1 cut(s) 1075
BsgI GTGCAG 1 cut(s) 27
Bsh1236I CGCG 1 cut(s) 200
BshFI GGCC 3 cut(s) 634, 1089, 1521
BshNI GGYRCC 3 cut(s) 203, 275, 581
BshTI ACCGGT 1 cut(s) 36
BsiHKAI GWGCWC 1 cut(s) 154
BsiSI CCGG 2 cut(s) 37, 307
BslI CCNNNNNNNGG 5 cut(s) 36, 221, 630, 798, 1529
BsmAI GTCTC 1 cut(s) 200
BsnI GGCC 3 cut(s) 634, 1089, 1521
Bso31I GGTCTC 1 cut(s) 200
Bsp1286I GDGCHC 2 cut(s) 154, 206
Bsp143I GATC 4 cut(s) 90, 244, 466, 534
BspACI CCGC 2 cut(s) 200, 1518
BspANI GGCC 3 cut(s) 634, 1089, 1521
BspCNI CTCAG 4 cut(s) 208, 500, 1149, 1165
BspFNI CGCG 1 cut(s) 200
BspLI GGNNCC 6 cut(s) 205, 277, 370, 421, 583, 633
BspMAI CTGCAG 1 cut(s) 1439
BspT107I GGYRCC 3 cut(s) 203, 275, 581
BspTI CTTAAG 1 cut(s) 1474
BspTNI GGTCTC 1 cut(s) 200
BsrBI CCGCTC 1 cut(s) 1518
BsrDI GCAATG 3 cut(s) 233, 809, 1583
BsrFI RCCGGY 2 cut(s) 36, 306
BsrI ACTGG 3 cut(s) 134, 1197, 1458
BssAI RCCGGY 2 cut(s) 36, 306
BssECI CCNNGG 2 cut(s) 271, 1090
BssMI GATC 4 cut(s) 90, 244, 466, 534
BssT1I CCWWGG 1 cut(s) 1090
Bst2UI CCWGG 2 cut(s) 272, 1530
Bst4CI ACNGT 2 cut(s) 266, 673
BstAFI CTTAAG 1 cut(s) 1474
BstAPI GCANNNNNTGC 2 cut(s) 50, 1233
BstC8I GCNNGC 4 cut(s) 154, 202, 298, 302
BstDEI CTNAG 5 cut(s) 216, 487, 1136, 1173, 1334
BstENI CCTNNNNNAGG 1 cut(s) 219
BstF5I GGATG 3 cut(s) 252, 1004, 1452
BstFNI CGCG 1 cut(s) 200
BstHHI GCGC 1 cut(s) 306
BstKTI GATC 4 cut(s) 93, 247, 469, 537
BstMAI GTCTC 1 cut(s) 200
BstMBI GATC 4 cut(s) 90, 244, 466, 534
BstMWI GCNNNNNNNGC 2 cut(s) 50, 1233
BstNI CCWGG 2 cut(s) 272, 1530
BstSCI CCNGG 2 cut(s) 270, 1528
BstSFI CTRYAG 1 cut(s) 1435
BstSLI GKGCMC 2 cut(s) 154, 206
BstUI CGCG 1 cut(s) 200
BstV1I GCAGC 3 cut(s) 17, 1136, 1449
BstV2I GAAGAC 2 cut(s) 643, 1549
BsuI GTATCC 2 cut(s) 323, 1586
BsuRI GGCC 3 cut(s) 634, 1089, 1521
BtsCI GGATG 3 cut(s) 252, 1004, 1452
BtsIMutI CAGTG 2 cut(s) 1144, 1465
Cac8I GCNNGC 4 cut(s) 154, 202, 298, 302
CfoI GCGC 1 cut(s) 306
Cfr10I RCCGGY 2 cut(s) 36, 306
Cfr13I GGNCC 4 cut(s) 369, 632, 779, 1520
Csp6I GTAC 2 cut(s) 276, 924
CspAI ACCGGT 1 cut(s) 36
CspCI CAANNNNNGTGG 2 cut(s) 829, 864
CviAII CATG 3 cut(s) 88, 360, 976
CviQI GTAC 2 cut(s) 276, 924
DdeI CTNAG 5 cut(s) 216, 487, 1136, 1173, 1334
DpnI GATC 4 cut(s) 92, 246, 468, 536
DpnII GATC 4 cut(s) 90, 244, 466, 534
DraIII CACNNNGTG 1 cut(s) 1233
Eco130I CCWWGG 1 cut(s) 1090
Eco147I AGGCCT 1 cut(s) 1089
Eco31I GGTCTC 1 cut(s) 200
Eco47I GGWCC 2 cut(s) 369, 779
Eco57I CTGAAG 3 cut(s) 1163, 1375, 1406
EcoNI CCTNNNNNAGG 1 cut(s) 219
EcoO109I RGGNCCY 2 cut(s) 369, 632
EcoRI GAATTC 1 cut(s) 708
EcoRII CCWGG 2 cut(s) 270, 1528
EcoT14I CCWWGG 1 cut(s) 1090
EcoT22I ATGCAT 1 cut(s) 1575
ErhI CCWWGG 1 cut(s) 1090
FaeI CATG 3 cut(s) 91, 363, 979
FalI AAGNNNNNCTT 2 cut(s) 1373, 1405
FatI CATG 3 cut(s) 87, 359, 975
FauI CCCGC 1 cut(s) 193
FauNDI CATATG 1 cut(s) 934
Fnu4HI GCNGC 4 cut(s) 6, 1125, 1438, 1519
FokI GGATG 3 cut(s) 239, 991, 1439
Fsp4HI GCNGC 4 cut(s) 6, 1125, 1438, 1519
FspBI CTAG 3 cut(s) 596, 1187, 1619
GlaI GCGC 1 cut(s) 305
GluI GCNGC 4 cut(s) 6, 1125, 1438, 1519
GsaI CCCAGC 1 cut(s) 1079
GsuI CTGGAG 2 cut(s) 484, 1284
HaeIII GGCC 3 cut(s) 634, 1089, 1521
HapII CCGG 2 cut(s) 37, 307
HhaI GCGC 1 cut(s) 306
Hin1II CATG 3 cut(s) 91, 363, 979
Hin6I GCGC 1 cut(s) 304
HinP1I GCGC 1 cut(s) 304
HincII GTYRAC 4 cut(s) 108, 728, 918, 1616
HindII GTYRAC 4 cut(s) 108, 728, 918, 1616
HindIII AAGCTT 1 cut(s) 1382
HinfI GANTC 8 cut(s) 165, 390, 565, 589, 1129, 1552, 1650, 1663
HpaI GTTAAC 1 cut(s) 918
HpaII CCGG 2 cut(s) 37, 307
HphI GGTGA 2 cut(s) 19, 1124
Hpy166II GTNNAC 6 cut(s) 108, 152, 728, 782, 918, 1616
Hpy188I TCNGA 5 cut(s) 249, 512, 1174, 1262, 1662
Hpy188III TCNNGA 9 cut(s) 215, 501, 713, 746, 1187, 1212, 1240, 1301, 1601
Hpy8I GTNNAC 6 cut(s) 108, 152, 728, 782, 918, 1616
HpyAV CCTTC 6 cut(s) 366, 523, 798, 1366, 1399, 1682
HpyCH4III ACNGT 2 cut(s) 266, 673
HpyCH4IV ACGT 2 cut(s) 524, 1104
HpyF10VI GCNNNNNNNGC 2 cut(s) 50, 1233
HpyF3I CTNAG 5 cut(s) 216, 487, 1136, 1173, 1334
HpySE526I ACGT 2 cut(s) 524, 1104
Hsp92II CATG 3 cut(s) 91, 363, 979
HspAI GCGC 1 cut(s) 304
KpnI GGTACC 1 cut(s) 279
KspAI GTTAAC 1 cut(s) 918
Kzo9I GATC 4 cut(s) 90, 244, 466, 534
Lsp1109I GCAGC 3 cut(s) 17, 1136, 1449
LweI GCATC 3 cut(s) 147, 1059, 1415
MaeI CTAG 3 cut(s) 596, 1187, 1619
MaeII ACGT 2 cut(s) 524, 1104
MaeIII GTNAC 5 cut(s) 74, 166, 676, 1199, 1448
MalI GATC 4 cut(s) 92, 246, 468, 536
MbiI CCGCTC 1 cut(s) 1518
MboI GATC 4 cut(s) 90, 244, 466, 534
MboII GAAGA 9 cut(s) 430, 643, 725, 864, 941, 1006, 1412, 1547, 1554
MfeI CAATTG 2 cut(s) 100, 1511
MhlI GDGCHC 2 cut(s) 154, 206
MlyI GAGTC 1 cut(s) 174
MmeI TCCRAC 1 cut(s) 732
Mph1103I ATGCAT 1 cut(s) 1575
MroXI GAANNNNTTC 1 cut(s) 1113
MseI TTAA 8 cut(s) 21, 321, 626, 878, 917, 1308, 1373, 1475
MslI CAYNNNNRTG 1 cut(s) 1137
MspCI CTTAAG 1 cut(s) 1474
MspI CCGG 2 cut(s) 37, 307
MspR9I CCNGG 2 cut(s) 272, 1530
MunI CAATTG 2 cut(s) 100, 1511
MvaI CCWGG 2 cut(s) 272, 1530
MvnI CGCG 1 cut(s) 200
MwoI GCNNNNNNNGC 2 cut(s) 50, 1233
NdeI CATATG 1 cut(s) 934
NdeII GATC 4 cut(s) 90, 244, 466, 534
NlaIII CATG 3 cut(s) 91, 363, 979
NlaIV GGNNCC 6 cut(s) 205, 277, 370, 421, 583, 633
NmeAIII GCCGAG 1 cut(s) 1026
NmuCI GTSAC 2 cut(s) 74, 166
NsiI ATGCAT 1 cut(s) 1575
OliI CACNNNNGTG 1 cut(s) 1137
PceI AGGCCT 1 cut(s) 1089
PcsI WCGNNNNNNNCGW 2 cut(s) 160, 530
PdmI GAANNNNTTC 1 cut(s) 1113
PfeI GAWTC 7 cut(s) 390, 565, 589, 1129, 1552, 1650, 1663
PflMI CCANNNNNTGG 1 cut(s) 798
PinAI ACCGGT 1 cut(s) 36
PkrI GCNGC 4 cut(s) 7, 1126, 1439, 1520
PleI GAGTC 1 cut(s) 173
PpsI GAGTC 1 cut(s) 173
PpuMI RGGWCCY 1 cut(s) 369
PsiI TTATAA 3 cut(s) 477, 549, 1578
Psp1406I AACGTT 1 cut(s) 524
Psp5II RGGWCCY 1 cut(s) 369
Psp6I CCWGG 2 cut(s) 270, 1528
PspFI CCCAGC 1 cut(s) 1075
PspGI CCWGG 2 cut(s) 270, 1528
PspN4I GGNNCC 6 cut(s) 205, 277, 370, 421, 583, 633
PspPI GGNCC 4 cut(s) 369, 632, 779, 1520
PspPPI RGGWCCY 1 cut(s) 369
PsrI GAACNNNNNNTAC 2 cut(s) 170, 202
PstI CTGCAG 1 cut(s) 1439
RsaI GTAC 2 cut(s) 277, 925
RsaNI GTAC 2 cut(s) 276, 924
RseI CAYNNNNRTG 1 cut(s) 1137
SaqAI TTAA 8 cut(s) 21, 321, 626, 878, 917, 1308, 1373, 1475
SatI GCNGC 4 cut(s) 6, 1125, 1438, 1519
Sau3AI GATC 4 cut(s) 90, 244, 466, 534
Sau96I GGNCC 4 cut(s) 369, 632, 779, 1520
SchI GAGTC 1 cut(s) 174
ScrFI CCNGG 2 cut(s) 272, 1530
SduI GDGCHC 2 cut(s) 154, 206
SfaNI GCATC 3 cut(s) 147, 1059, 1415
SfcI CTRYAG 1 cut(s) 1435
SinI GGWCC 2 cut(s) 369, 779
SmiMI CAYNNNNRTG 1 cut(s) 1137
SmlI CTYRAG 4 cut(s) 1250, 1360, 1441, 1474
SmoI CTYRAG 4 cut(s) 1250, 1360, 1441, 1474
SseBI AGGCCT 1 cut(s) 1089
SsiI CCGC 2 cut(s) 200, 1518
SspI AATATT 2 cut(s) 742, 1312
SspMI CTAG 3 cut(s) 596, 1187, 1619
StuI AGGCCT 1 cut(s) 1089
StyD4I CCNGG 2 cut(s) 270, 1528
StyI CCWWGG 1 cut(s) 1090
TaaI ACNGT 2 cut(s) 266, 673
TaiI ACGT 2 cut(s) 527, 1107
TaqI TCGA 2 cut(s) 163, 1500
TauI GCSGC 1 cut(s) 1521
TfiI GAWTC 7 cut(s) 390, 565, 589, 1129, 1552, 1650, 1663
Tru1I TTAA 8 cut(s) 21, 321, 626, 878, 917, 1308, 1373, 1475
Tru9I TTAA 8 cut(s) 21, 321, 626, 878, 917, 1308, 1373, 1475
TscAI CASTG 2 cut(s) 1144, 1465
TseFI GTSAC 2 cut(s) 74, 166
TseI GCWGC 3 cut(s) 5, 1124, 1437
Tsp45I GTSAC 2 cut(s) 74, 166
TspDTI ATGAA 3 cut(s) 348, 951, 1620
TspRI CASTG 2 cut(s) 1144, 1465
Van91I CCANNNNNTGG 1 cut(s) 798
Vha464I CTTAAG 1 cut(s) 1474
VneI GTGCAC 1 cut(s) 150
VpaK11BI GGWCC 2 cut(s) 369, 779
XagI CCTNNNNNAGG 1 cut(s) 219
XapI RAATTY 5 cut(s) 708, 720, 938, 955, 1339
XbaI TCTAGA 1 cut(s) 1186
XmnI GAANNNNTTC 1 cut(s) 1113
XspI CTAG 3 cut(s) 596, 1187, 1619
Zsp2I ATGCAT 1 cut(s) 1575
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.