Rw2G019150

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Reverse (-)
25137476 .. 25149411
11936 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G019150.1

Sequence Viewer

Length: 867 bp
ATGTGTGTGTATATATATATTATGGGATGTATATATATACATATATATTCATGTATTAGTTCCATACCAGCCACAATCTTCAACTTATCTGCTCTGCAAATAATTAATCTGAGTTATAACCAACTCTCAGTCCATGTCCATCCAAATGGTCACAATGTAAACCACTCTTTTTTATTACATAGCATACCCGTTAATATTCATCATTTAACCCATATAAAAATGATTGATATTAGCTCGAACTATTTGACAAGTAGAATACCCAGAGAAATCGGGAACCTAACAATGTTGAAGGAGATCTACCTTGATAGTAATAATTTTGAAGAAATTCCAAATGAGATCGGCACTTTGAATCATGTGGAAGAGTTGTTTGTGCAACAAAATGTCTTAGAAGGGCCTATTCCTATGATTGTCTTCAACATGTCAACTTTGACTACTCTAACTTTCTATGGAAACAACTTGAATGGTAGAATTCCCGACAATATATGTCAACACCTTCCAAATATTCAACAGTTGAATTTGGGTACCAATCAGTTTGATGGTCCACTTCCATCCACGTTATGGCAATGCAGACAACTTCTTACTTTAATCTTGGACGGTAACAGGTTCAATGGAAGAATACCCAAATATATTGGGAACTTAACTCGGATAAAGAGGATTTGGCTTGACACCAACAACTTGACAGGTAGCCTCCCAGCAAACATAGGCCTTGGGCTTCCAAACCTAGAAGAGTTTACAGTAGGAGCGAATCATCTCAGTGGAGTAATCCCCAAATCCATCTCCAATGCTTCTAAGCTTCGGATTCTAGACCTGGGAGGTAACTCTTTTTTTGGATTTATTCCAAGCATTCTATGCCTCTTGACCTCTTGA

Protein Analysis

288

Amino Acids

32.26

Weight (kDa)

6.62

Isoelectric Point (pI)

38.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 65 - 148 4.4e-08 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000229)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13780 FvH4_1g13790 FvH4_3g37750
malus_domestica MD00G1192800.v1.1 MD02G1291700.v1.1 MD03G1180500.v1.1 MD03G1181600.v1.1 MD03G1181700.v1.1 MD03G1181900.v1.1 MD03G1182700.v1.1 MD03G1281400.v1.1 MD05G1297800.v1.1 MD05G1298300.v1.1 MD07G1034800.v1.1 MD10G1265200.v1.1 MD10G1277500.v1.1
prunus_persica Prupe.4G063500_v2.0.a1 Prupe.6G160500_v2.0.a1
pyrus_communis pycom04g04980 pycom05g27570 pycom05g27590 pycom10g25090
rosa_chinensis RchiOBHm_Chr2g0113621 RchiOBHm_Chr2g0113671 RchiOBHm_Chr2g0113771 RchiOBHm_Chr2g0113871 RchiOBHm_Chr2g0114031 RchiOBHm_Chr2g0114181 RchiOBHm_Chr2g0114201 RchiOBHm_Chr2g0114231 RchiOBHm_Chr2g0114241 RchiOBHm_Chr4g0403181 RchiOBHm_Chr4g0404251 RchiOBHm_Chr4g0404291 RchiOBHm_Chr4g0404471 RchiOBHm_Chr5g0010961 RchiOBHm_Chr5g0010971 RchiOBHm_Chr5g0010981 RchiOBHm_Chr5g0011131 RchiOBHm_Chr5g0011311 RchiOBHm_Chr5g0011321 RchiOBHm_Chr5g0011361 RchiOBHm_Chr5g0016031 RchiOBHm_Chr5g0040141 RchiOBHm_Chr5g0040411 RchiOBHm_Chr5g0040471 RchiOBHm_Chr5g0059151 RchiOBHm_Chr5g0059191 RchiOBHm_Chr6g0251861 RchiOBHm_Chr7g0213311 RchiOBHm_Chr7g0213321
rosa_laevigata RLG00000009001 RLG00000009062 RLG00000018075 RLG00000018085 RLG00000018097 RLG00000031818 RLG00000034199
rosa_multiflora Rmu_co7972198.1_g000001 Rmu_co8328773.1_g000001 Rmu_sc0000929.1_g000033 Rmu_sc0001023.1_g000056 Rmu_sc0001699.1_g000007 Rmu_sc0003151.1_g000028 Rmu_sc0003242.1_g000010 Rmu_sc0004283.1_g000012 Rmu_sc0004283.1_g000036 Rmu_sc0004283.1_g000048 Rmu_sc0004283.1_g000066 Rmu_sc0005187.1_g000011 Rmu_sc0007010.1_g000008 Rmu_sc0007109.1_g000001 Rmu_sc0008397.1_g000007 Rmu_sc0009151.1_g000001 Rmu_sc0009639.1_g000020 Rmu_sc0009975.1_g000007 Rmu_sc0009975.1_g000010 Rmu_sc0010543.1_g000006 Rmu_sc0011398.1_g000001 Rmu_sc0011941.1_g000025 Rmu_sc0013141.1_g000002 Rmu_sc0016457.1_g000002 Rmu_sc0038501.1_g000001 Rmu_ssc0000303.1_g000008
rosa_roxburghii Rroxscaffold_1G00040180 Rroxscaffold_1G00040280 Rroxscaffold_1G00040900 Rroxscaffold_1G00064830 Rroxscaffold_1G00065410 Rroxscaffold_2G00130010 Rroxscaffold_2G00130040
rosa_rugosa Rorug02G0188500 Rorug02G0188800 Rorug02G0188900 Rorug02G0189500 Rorug04G0458400 Rorug05G0184800
rosa_samantha Rh1CG253300 Rh2CG247500 Rh2CG247600 Rh2CG247900 Rh2CG248300 Rh2CG249100 Rh2CG249400 Rh2CG249800 Rh2CG249900 Rh2CG250000 Rh2CG250100 Rh2CG250200 Rh2CG262700 Rh4AG118100 Rh4AG118300 Rh4AG364100 Rh4BG106900 Rh4CG125100 Rh4DG110100 Rh4DG110500 Rh4DG110600 Rh4DG369800 Rh5CG093500 Rh5CG093600 Rh5CG093700 Rh5CG095300 Rh5CG095500 Rh5CG096100 Rh5CG096200 Rh5CG096400 Rh5CG099600 Rh5CG134600 Rh5CG421300 Rh6DG142900 Rh7AG370200
rosa_wichuraiana Rw0G001470 Rw0G014660 Rw0G017510 Rw0G017750 Rw1G005500 Rw2G018440 Rw2G018460 Rw2G018490 Rw2G019150 Rw4G009550 Rw5G007590 Rw5G007860 Rw6G001510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 117
Acc65I GGTACC 1 cut(s) 521
AccB1I GGYRCC 1 cut(s) 521
AccB7I CCANNNNNTGG 1 cut(s) 558
AcsI RAATTY 3 cut(s) 324, 468, 514
AfaI GTAC 1 cut(s) 523
AfiI CCNNNNNNNGG 1 cut(s) 558
AflIII ACRYGT 1 cut(s) 417
AgsI TTSAA 9 cut(s) 82, 289, 320, 349, 415, 460, 506, 514, 607
AjnI CCWGG 1 cut(s) 807
AluBI AGCT 2 cut(s) 234, 793
AluI AGCT 2 cut(s) 234, 793
AoxI GGCC 2 cut(s) 392, 703
ApoI RAATTY 3 cut(s) 324, 468, 514
AseI ATTAAT 1 cut(s) 105
Asp700I GAANNNNTTC 1 cut(s) 324
Asp718I GGTACC 1 cut(s) 521
AspS9I GGNCC 2 cut(s) 392, 539
AvaII GGWCC 1 cut(s) 539
BanI GGYRCC 1 cut(s) 521
BarI GAAGNNNNNNTAC 2 cut(s) 281, 313
BbsI GAAGAC 1 cut(s) 403
BccI CCATC 4 cut(s) 147, 530, 556, 782
BciT130I CCWGG 1 cut(s) 809
BfaI CTAG 2 cut(s) 722, 803
BglII AGATCT 1 cut(s) 294
Bme1390I CCNGG 1 cut(s) 809
Bme18I GGWCC 1 cut(s) 539
BmgT120I GGNCC 2 cut(s) 392, 539
BmiI GGNNCC 2 cut(s) 275, 523
BmrFI CCNGG 1 cut(s) 809
BpiI GAAGAC 1 cut(s) 403
BsaJI CCNNGG 2 cut(s) 706, 808
Bsc4I CCNNNNNNNGG 1 cut(s) 558
Bse3DI GCAATG 1 cut(s) 569
BseBI CCWGG 1 cut(s) 809
BseDI CCNNGG 2 cut(s) 706, 808
BseGI GGATG 3 cut(s) 32, 139, 548
BseLI CCNNNNNNNGG 1 cut(s) 558
BseMI GCAATG 1 cut(s) 569
BseMII CTCAG 3 cut(s) 101, 141, 766
BseYI CCCAGC 1 cut(s) 691
BshFI GGCC 2 cut(s) 394, 705
BshNI GGYRCC 1 cut(s) 521
BslI CCNNNNNNNGG 1 cut(s) 558
BsmI GAATGC 1 cut(s) 843
BsnI GGCC 2 cut(s) 394, 705
Bsp143I GATC 2 cut(s) 294, 336
BspANI GGCC 2 cut(s) 394, 705
BspCNI CTCAG 3 cut(s) 102, 140, 765
BspLI GGNNCC 2 cut(s) 275, 523
BspT107I GGYRCC 1 cut(s) 521
BsrDI GCAATG 1 cut(s) 569
BssECI CCNNGG 2 cut(s) 706, 808
BssMI GATC 2 cut(s) 294, 336
BssT1I CCWWGG 1 cut(s) 706
Bst2UI CCWGG 1 cut(s) 809
Bst4CI ACNGT 3 cut(s) 510, 596, 736
Bst6I CTCTTC 2 cut(s) 354, 720
BstAPI GCANNNNNTGC 1 cut(s) 849
BstDEI CTNAG 5 cut(s) 110, 127, 385, 752, 789
BstF5I GGATG 3 cut(s) 32, 139, 548
BstKTI GATC 2 cut(s) 297, 339
BstMBI GATC 2 cut(s) 294, 336
BstMWI GCNNNNNNNGC 1 cut(s) 849
BstNI CCWGG 1 cut(s) 809
BstNSI RCATGY 1 cut(s) 421
BstSCI CCNGG 1 cut(s) 807
BstV2I GAAGAC 1 cut(s) 403
BstX2I RGATCY 1 cut(s) 294
BstXI CCANNNNNNTGG 1 cut(s) 146
BstYI RGATCY 1 cut(s) 294
BsuRI GGCC 2 cut(s) 394, 705
BtsCI GGATG 3 cut(s) 32, 139, 548
BtsIMutI CAGTG 1 cut(s) 760
Cfr13I GGNCC 2 cut(s) 392, 539
Csp6I GTAC 1 cut(s) 522
CviAII CATG 4 cut(s) 51, 134, 353, 418
CviJI RGCY 8 cut(s) 71, 234, 394, 661, 687, 705, 712, 793
CviKI_1 RGCY 8 cut(s) 71, 234, 394, 661, 687, 705, 712, 793
CviQI GTAC 1 cut(s) 522
DdeI CTNAG 5 cut(s) 110, 127, 385, 752, 789
DpnI GATC 2 cut(s) 296, 338
DpnII GATC 2 cut(s) 294, 336
Eam1104I CTCTTC 2 cut(s) 354, 720
EarI CTCTTC 2 cut(s) 354, 720
Eco130I CCWWGG 1 cut(s) 706
Eco147I AGGCCT 1 cut(s) 705
Eco47I GGWCC 1 cut(s) 539
EcoO109I RGGNCCY 1 cut(s) 392
EcoRI GAATTC 1 cut(s) 468
EcoRII CCWGG 1 cut(s) 807
EcoT14I CCWWGG 1 cut(s) 706
ErhI CCWWGG 1 cut(s) 706
FaeI CATG 4 cut(s) 54, 137, 356, 421
FatI CATG 4 cut(s) 50, 133, 352, 417
FokI GGATG 3 cut(s) 39, 126, 535
FspBI CTAG 2 cut(s) 722, 803
GsaI CCCAGC 1 cut(s) 695
HaeIII GGCC 2 cut(s) 394, 705
Hin1II CATG 4 cut(s) 54, 137, 356, 421
HincII GTYRAC 2 cut(s) 423, 488
HindII GTYRAC 2 cut(s) 423, 488
HindIII AAGCTT 1 cut(s) 791
HinfI GANTC 3 cut(s) 349, 745, 799
Hpy166II GTNNAC 5 cut(s) 160, 423, 488, 542, 732
Hpy188I TCNGA 3 cut(s) 111, 645, 798
Hpy188III TCNNGA 5 cut(s) 271, 473, 803, 856, 864
Hpy8I GTNNAC 5 cut(s) 160, 423, 488, 542, 732
HpyAV CCTTC 3 cut(s) 283, 383, 503
HpyCH4III ACNGT 3 cut(s) 510, 596, 736
HpyCH4IV ACGT 1 cut(s) 554
HpyCH4V TGCA 3 cut(s) 97, 373, 567
HpyF10VI GCNNNNNNNGC 1 cut(s) 849
HpyF3I CTNAG 5 cut(s) 110, 127, 385, 752, 789
HpySE526I ACGT 1 cut(s) 554
Hsp92II CATG 4 cut(s) 54, 137, 356, 421
KpnI GGTACC 1 cut(s) 525
Kzo9I GATC 2 cut(s) 294, 336
LmnI GCTCC 1 cut(s) 740
LpnPI CCDG 7 cut(s) 81, 274, 586, 666, 705, 794, 821
MaeI CTAG 2 cut(s) 722, 803
MaeII ACGT 1 cut(s) 554
MaeIII GTNAC 3 cut(s) 149, 596, 815
MalI GATC 2 cut(s) 296, 338
MboI GATC 2 cut(s) 294, 336
MboII GAAGA 6 cut(s) 70, 332, 371, 403, 624, 737
MflI RGATCY 1 cut(s) 294
MluCI AATT 5 cut(s) 102, 313, 324, 468, 514
MnlI CCTC 4 cut(s) 645, 698, 806, 863
MroXI GAANNNNTTC 1 cut(s) 324
MseI TTAA 5 cut(s) 105, 192, 206, 584, 638
MslI CAYNNNNRTG 2 cut(s) 144, 753
MspR9I CCNGG 1 cut(s) 809
Mva1269I GAATGC 1 cut(s) 843
MvaI CCWGG 1 cut(s) 809
MwoI GCNNNNNNNGC 1 cut(s) 849
NdeII GATC 2 cut(s) 294, 336
NlaIII CATG 4 cut(s) 54, 137, 356, 421
NlaIV GGNNCC 2 cut(s) 275, 523
NmuCI GTSAC 1 cut(s) 149
NspI RCATGY 1 cut(s) 421
PceI AGGCCT 1 cut(s) 705
PciI ACATGT 1 cut(s) 417
PctI GAATGC 1 cut(s) 843
PdmI GAANNNNTTC 1 cut(s) 324
PfeI GAWTC 3 cut(s) 349, 745, 799
PflMI CCANNNNNTGG 1 cut(s) 558
PscI ACATGT 1 cut(s) 417
PshBI ATTAAT 1 cut(s) 105
PsiI TTATAA 1 cut(s) 117
Psp6I CCWGG 1 cut(s) 807
PspFI CCCAGC 1 cut(s) 691
PspGI CCWGG 1 cut(s) 807
PspN4I GGNNCC 2 cut(s) 275, 523
PspPI GGNCC 2 cut(s) 392, 539
PsuI RGATCY 1 cut(s) 294
RsaI GTAC 1 cut(s) 523
RsaNI GTAC 1 cut(s) 522
RseI CAYNNNNRTG 2 cut(s) 144, 753
SaqAI TTAA 5 cut(s) 105, 192, 206, 584, 638
Sau3AI GATC 2 cut(s) 294, 336
Sau96I GGNCC 2 cut(s) 392, 539
ScrFI CCNGG 1 cut(s) 809
SinI GGWCC 1 cut(s) 539
SmiMI CAYNNNNRTG 2 cut(s) 144, 753
Sse9I AATT 5 cut(s) 102, 313, 324, 468, 514
SseBI AGGCCT 1 cut(s) 705
SspI AATATT 2 cut(s) 196, 502
SspMI CTAG 2 cut(s) 722, 803
StuI AGGCCT 1 cut(s) 705
StyD4I CCNGG 1 cut(s) 807
StyI CCWWGG 1 cut(s) 706
TaaI ACNGT 3 cut(s) 510, 596, 736
TaiI ACGT 1 cut(s) 557
TaqI TCGA 1 cut(s) 236
TasI AATT 5 cut(s) 102, 313, 324, 468, 514
TfiI GAWTC 3 cut(s) 349, 745, 799
Tru1I TTAA 5 cut(s) 105, 192, 206, 584, 638
Tru9I TTAA 5 cut(s) 105, 192, 206, 584, 638
TscAI CASTG 1 cut(s) 760
TseFI GTSAC 1 cut(s) 149
Tsp45I GTSAC 1 cut(s) 149
TspDTI ATGAA 2 cut(s) 39, 188
TspRI CASTG 1 cut(s) 760
Van91I CCANNNNNTGG 1 cut(s) 558
VpaK11BI GGWCC 1 cut(s) 539
VspI ATTAAT 1 cut(s) 105
XapI RAATTY 3 cut(s) 324, 468, 514
XbaI TCTAGA 1 cut(s) 802
XceI RCATGY 1 cut(s) 421
XcmI CCANNNNNNNNNTGG 1 cut(s) 555
XmnI GAANNNNTTC 1 cut(s) 324
XspI CTAG 2 cut(s) 722, 803
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.