Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0000229

Physical Location & Seq

Genomic Coordinates Reverse (-)

7702600 .. 7704168

Gene Structure 1569 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG096400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1026 bp

ATGTCAACTGTCAAGCCAGTTCCTCTTGTAACTCTAGCTTCTCAGATTCAATTAAAACCTCCACACGTTCTGCACATATCCATCTCCGTTCCGGCAACATATATCCCAACAATGGAGAGAATTACTTGGTTCTTCCTGGCCGCGGCTAGCTGCTTAACTATGGCAGCAGCACTAACCAACAGTAATCTCACTACAGATGAGTCTGCTCTTCTTGCTCTCAAAGCTCATATCACCAGTGATCCTCATAACATGATCTCCACCAACTGGTCAACCACCACCCCTGTTTGCAACTGGGTTGGTGTTTCTTGTGGTGCACGCCACTTTAGAGTGGCAGTTTTGAACCTCTCTTATATGGGACTCACGAGCACCATTCCTCCGGAGCTCGGTAACCTATCGTTCCTTGTTGCGCTAAGCTTGAGAAATAACAGTTTTCATGGTACCTTGCCTTTGGAATTGGGTCGTTTGCGCCGATTGAAGCTCATCAGTTTCAGATTCAACAATTTTATGGGAGCCATTCCATCATGGTTTGGGTCCTTATCCAAACTTGAAACCTTCGATTTGTATGGTAATCGATTTTCAGGCTCCATACCTGCTGCCATCTTCAACTTAACAGCTCTCCAAGTAATCAACCTGAGCTATAACCAGCTATCAGGTAGCATACCAAGAGAAATTGGAAACCTAACACAGTTGAAGGAGATATACCTTGATAGAAAAAATTTCAAAGAAATTCCAAACGAGATTGGAGCCTTGAATCAACTGGAGAGGTTGTTTGTGCAGTTCAATGCATTAGAAGGGCATGTTCCTCTCGCTGTCTTCAACATGTCTTCTTTGATTACTATGACTTCCTATAGAAACAGTTTGAATGGTAGTCTTCCAGAGAATACATATCAACATCTTCCGAGCATTCAACAGTTGGATTTGGCTCAGAACCAGATTGATGGTCCAATTCCATCCAATATTGGCAACTTAACCCAGATAAGGATGATTGACCTTGGCTGGAACTATTTGACAGGTATTCCACCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04010 ko04016 ko04064 ko04620 ko04621 ko04624 ko04626 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 ko05169 map04010 map04016 map04064 map04620 map04621 map04624 map04626 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164 map05169

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

341

Amino Acids

37.7

Weight (kDa)

8.78

Isoelectric Point (pI)

28.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	65 - 103	1.1e-10	Leucine rich repeat N-terminal domain
LRR_14	PF23598	113 - 215	5e-09	Leucine-rich repeat region
LRR_8	PF13855	157 - 216	2e-08	Leucine rich repeat
LRR_8	PF13855	197 - 237	4.1e-06	Leucine rich repeat
LRR_14	PF23598	202 - 334	2.7e-12	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000229)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g13780 FvH4_1g13790 FvH4_3g37750
malus_domestica	MD00G1192800.v1.1 MD02G1291700.v1.1 MD03G1180500.v1.1 MD03G1181600.v1.1 MD03G1181700.v1.1 MD03G1181900.v1.1 MD03G1182700.v1.1 MD03G1281400.v1.1 MD05G1297800.v1.1 MD05G1298300.v1.1 MD07G1034800.v1.1 MD10G1265200.v1.1 MD10G1277500.v1.1
prunus_persica	Prupe.4G063500_v2.0.a1 Prupe.6G160500_v2.0.a1
pyrus_communis	pycom04g04980 pycom05g27570 pycom05g27590 pycom10g25090
rosa_chinensis	RchiOBHm_Chr2g0113621 RchiOBHm_Chr2g0113671 RchiOBHm_Chr2g0113771 RchiOBHm_Chr2g0113871 RchiOBHm_Chr2g0114031 RchiOBHm_Chr2g0114181 RchiOBHm_Chr2g0114201 RchiOBHm_Chr2g0114231 RchiOBHm_Chr2g0114241 RchiOBHm_Chr4g0403181 RchiOBHm_Chr4g0404251 RchiOBHm_Chr4g0404291 RchiOBHm_Chr4g0404471 RchiOBHm_Chr5g0010961 RchiOBHm_Chr5g0010971 RchiOBHm_Chr5g0010981 RchiOBHm_Chr5g0011131 RchiOBHm_Chr5g0011311 RchiOBHm_Chr5g0011321 RchiOBHm_Chr5g0011361 RchiOBHm_Chr5g0016031 RchiOBHm_Chr5g0040141 RchiOBHm_Chr5g0040411 RchiOBHm_Chr5g0040471 RchiOBHm_Chr5g0059151 RchiOBHm_Chr5g0059191 RchiOBHm_Chr6g0251861 RchiOBHm_Chr7g0213311 RchiOBHm_Chr7g0213321
rosa_laevigata	RLG00000009001 RLG00000009062 RLG00000018075 RLG00000018085 RLG00000018097 RLG00000031818 RLG00000034199
rosa_multiflora	Rmu_co7972198.1_g000001 Rmu_co8328773.1_g000001 Rmu_sc0000929.1_g000033 Rmu_sc0001023.1_g000056 Rmu_sc0001699.1_g000007 Rmu_sc0003151.1_g000028 Rmu_sc0003242.1_g000010 Rmu_sc0004283.1_g000012 Rmu_sc0004283.1_g000036 Rmu_sc0004283.1_g000048 Rmu_sc0004283.1_g000066 Rmu_sc0005187.1_g000011 Rmu_sc0007010.1_g000008 Rmu_sc0007109.1_g000001 Rmu_sc0008397.1_g000007 Rmu_sc0009151.1_g000001 Rmu_sc0009639.1_g000020 Rmu_sc0009975.1_g000007 Rmu_sc0009975.1_g000010 Rmu_sc0010543.1_g000006 Rmu_sc0011398.1_g000001 Rmu_sc0011941.1_g000025 Rmu_sc0013141.1_g000002 Rmu_sc0016457.1_g000002 Rmu_sc0038501.1_g000001 Rmu_ssc0000303.1_g000008
rosa_roxburghii	Rroxscaffold_1G00040180 Rroxscaffold_1G00040280 Rroxscaffold_1G00040900 Rroxscaffold_1G00064830 Rroxscaffold_1G00065410 Rroxscaffold_2G00130010 Rroxscaffold_2G00130040
rosa_rugosa	Rorug02G0188500 Rorug02G0188800 Rorug02G0188900 Rorug02G0189500 Rorug04G0458400 Rorug05G0184800
rosa_samantha	Rh1CG253300 Rh2CG247500 Rh2CG247600 Rh2CG247900 Rh2CG248300 Rh2CG249100 Rh2CG249400 Rh2CG249800 Rh2CG249900 Rh2CG250000 Rh2CG250100 Rh2CG250200 Rh2CG262700 Rh4AG118100 Rh4AG118300 Rh4AG364100 Rh4BG106900 Rh4CG125100 Rh4DG110100 Rh4DG110500 Rh4DG110600 Rh4DG369800 Rh5CG093500 Rh5CG093600 Rh5CG093700 Rh5CG095300 Rh5CG095500 Rh5CG096100 Rh5CG096200 Rh5CG096400 Rh5CG099600 Rh5CG134600 Rh5CG421300 Rh6DG142900 Rh7AG370200
rosa_wichuraiana	Rw0G001470 Rw0G014660 Rw0G017510 Rw0G017750 Rw1G005500 Rw2G018440 Rw2G018460 Rw2G018490 Rw2G019150 Rw4G009550 Rw5G007590 Rw5G007860 Rw6G001510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	598
Acc65I	GGTACC	1 cut(s)	437
AccB1I	GGYRCC	1 cut(s)	437
AccB7I	CCANNNNNTGG	1 cut(s)	264
AccII	CGCG	1 cut(s)	143
AccIII	TCCGGA	1 cut(s)	376
AciI	CCGC	2 cut(s)	141, 143
AclWI	GGATC	1 cut(s)	233
AcoI	YGGCCR	1 cut(s)	138
AcsI	RAATTY	2 cut(s)	715, 726
AfaI	GTAC	1 cut(s)	439
AfiI	CCNNNNNNNGG	5 cut(s)	112, 142, 264, 383, 978
AflIII	ACRYGT	2 cut(s)	64, 819
AjnI	CCWGG	1 cut(s)	135
AluBI	AGCT	9 cut(s)	38, 150, 224, 382, 414, 478, 614, 636, 646
AluI	AGCT	9 cut(s)	38, 150, 224, 382, 414, 478, 614, 636, 646
Alw21I	GWGCWC	3 cut(s)	316, 368, 384
Alw44I	GTGCAC	1 cut(s)	312
AlwI	GGATC	1 cut(s)	233
Aor13HI	TCCGGA	1 cut(s)	376
AoxI	GGCC	1 cut(s)	138
ApaLI	GTGCAC	1 cut(s)	312
ApeKI	GCWGC	4 cut(s)	150, 164, 167, 593
ApoI	RAATTY	2 cut(s)	715, 726
Asp718I	GGTACC	1 cut(s)	437
AspLEI	GCGC	2 cut(s)	409, 468
AspS9I	GGNCC	2 cut(s)	531, 941
AsuHPI	GGTGA	1 cut(s)	223
AsuNHI	GCTAGC	1 cut(s)	146
AvaII	GGWCC	2 cut(s)	531, 941
BaeGI	GKGCMC	1 cut(s)	316
BanI	GGYRCC	1 cut(s)	437
BanII	GRGCYC	1 cut(s)	384
BarI	GAAGNNNNNNTAC	2 cut(s)	683, 715
BauI	CACGAG	1 cut(s)	361
BbsI	GAAGAC	3 cut(s)	805, 816, 863
Bbv12I	GWGCWC	3 cut(s)	316, 368, 384
BbvI	GCAGC	4 cut(s)	137, 176, 179, 580
BccI	CCATC	5 cut(s)	89, 526, 605, 932, 958
BciT130I	CCWGG	1 cut(s)	137
BfaI	CTAG	2 cut(s)	35, 147
BfmI	CTRYAG	2 cut(s)	192, 847
BfuAI	ACCTGC	1 cut(s)	598
BisI	GCNGC	6 cut(s)	141, 144, 151, 165, 168, 594
BlpI	GCTNAGC	1 cut(s)	410
BlsI	GCNGC	6 cut(s)	142, 145, 152, 166, 169, 595
Bme1390I	CCNGG	1 cut(s)	137
Bme18I	GGWCC	2 cut(s)	531, 941
BmgT120I	GGNCC	2 cut(s)	531, 941
BmiI	GGNNCC	5 cut(s)	439, 511, 532, 583, 745
BmrFI	CCNGG	1 cut(s)	137
BmrI	ACTGGG	1 cut(s)	301
BmtI	GCTAGC	1 cut(s)	150
BmuI	ACTGGG	1 cut(s)	301
BpiI	GAAGAC	3 cut(s)	805, 816, 863
BpmI	CTGGAG	1 cut(s)	779
Bpu10I	CCTNAGC	1 cut(s)	632
Bpu1102I	GCTNAGC	1 cut(s)	410
BpuEI	CTTGAG	1 cut(s)	436
Bsa29I	ATCGAT	1 cut(s)	571
BsaJI	CCNNGG	2 cut(s)	141, 991
BsaWI	WCCGGW	1 cut(s)	376
BsaXI	ACNNNNNCTCC	6 cut(s)	239, 269, 358, 388, 752, 782
Bsc4I	CCNNNNNNNGG	5 cut(s)	112, 142, 264, 383, 978
Bse1I	ACTGG	5 cut(s)	17, 234, 269, 296, 762
BseAI	TCCGGA	1 cut(s)	376
BseBI	CCWGG	1 cut(s)	137
BseCI	ATCGAT	1 cut(s)	571
BseDI	CCNNGG	2 cut(s)	141, 991
BseGI	GGATG	2 cut(s)	950, 987
BseLI	CCNNNNNNNGG	5 cut(s)	112, 142, 264, 383, 978
BseMII	CTCAG	3 cut(s)	56, 623, 938
BseNI	ACTGG	5 cut(s)	17, 234, 269, 296, 762
BseSI	GKGCMC	1 cut(s)	316
BseXI	GCAGC	4 cut(s)	137, 176, 179, 580
BsgI	GTGCAG	2 cut(s)	56, 794
Bsh1236I	CGCG	1 cut(s)	143
BshFI	GGCC	1 cut(s)	140
BshNI	GGYRCC	1 cut(s)	437
BshVI	ATCGAT	1 cut(s)	571
BsiHKAI	GWGCWC	3 cut(s)	316, 368, 384
BsiSI	CCGG	2 cut(s)	92, 377
BslFI	GGGAC	1 cut(s)	369
BslI	CCNNNNNNNGG	5 cut(s)	112, 142, 264, 383, 978
BsmFI	GGGAC	1 cut(s)	369
BsmI	GAATGC	1 cut(s)	903
BsnI	GGCC	1 cut(s)	140
Bsp1286I	GDGCHC	3 cut(s)	316, 368, 384
Bsp13I	TCCGGA	1 cut(s)	376
Bsp143I	GATC	2 cut(s)	238, 252
Bsp1720I	GCTNAGC	1 cut(s)	410
BspACI	CCGC	2 cut(s)	141, 143
BspANI	GGCC	1 cut(s)	140
BspCNI	CTCAG	3 cut(s)	55, 624, 937
BspDI	ATCGAT	1 cut(s)	571
BspEI	TCCGGA	1 cut(s)	376
BspFNI	CGCG	1 cut(s)	143
BspLI	GGNNCC	5 cut(s)	439, 511, 532, 583, 745
BspMI	ACCTGC	1 cut(s)	598
BspOI	GCTAGC	1 cut(s)	150
BspPI	GGATC	1 cut(s)	233
BspQI	GCTCTTC	1 cut(s)	213
BspT107I	GGYRCC	1 cut(s)	437
BsrI	ACTGG	5 cut(s)	17, 234, 269, 296, 762
BssECI	CCNNGG	2 cut(s)	141, 991
BssMI	GATC	2 cut(s)	238, 252
BssSI	CACGAG	1 cut(s)	361
BssT1I	CCWWGG	1 cut(s)	991
Bst2BI	CACGAG	1 cut(s)	361
Bst2UI	CCWGG	1 cut(s)	137
Bst4CI	ACNGT	6 cut(s)	10, 182, 428, 687, 857, 912
Bst6I	CTCTTC	1 cut(s)	213
BstC8I	GCNNGC	2 cut(s)	148, 316
BstDEI	CTNAG	4 cut(s)	42, 410, 632, 924
BstDSI	CCRYGG	1 cut(s)	141
BstEII	GGTNACC	1 cut(s)	386
BstF5I	GGATG	2 cut(s)	950, 987
BstFNI	CGCG	1 cut(s)	143
BstHHI	GCGC	2 cut(s)	409, 468
BstKTI	GATC	2 cut(s)	241, 255
BstMBI	GATC	2 cut(s)	238, 252
BstMWI	GCNNNNNNNGC	2 cut(s)	212, 221
BstNI	CCWGG	1 cut(s)	137
BstNSI	RCATGY	2 cut(s)	800, 823
BstPI	GGTNACC	1 cut(s)	386
BstSCI	CCNGG	1 cut(s)	135
BstSFI	CTRYAG	2 cut(s)	192, 847
BstSLI	GKGCMC	1 cut(s)	316
BstUI	CGCG	1 cut(s)	143
BstV1I	GCAGC	4 cut(s)	137, 176, 179, 580
BstV2I	GAAGAC	3 cut(s)	805, 816, 863
BstXI	CCANNNNNNTGG	1 cut(s)	938
Bsu15I	ATCGAT	1 cut(s)	571
BsuRI	GGCC	1 cut(s)	140
BsuTUI	ATCGAT	1 cut(s)	571
BtgI	CCRYGG	1 cut(s)	141
BtsCI	GGATG	2 cut(s)	950, 987
BtsIMutI	CAGTG	1 cut(s)	241
BveI	ACCTGC	1 cut(s)	598
Cac8I	GCNNGC	2 cut(s)	148, 316
CfoI	GCGC	2 cut(s)	409, 468
Cfr13I	GGNCC	2 cut(s)	531, 941
Cfr42I	CCGCGG	1 cut(s)	144
ClaI	ATCGAT	1 cut(s)	571
Csp6I	GTAC	1 cut(s)	438
CviAII	CATG	5 cut(s)	250, 434, 522, 797, 820
CviQI	GTAC	1 cut(s)	438
DdeI	CTNAG	4 cut(s)	42, 410, 632, 924
DpnI	GATC	2 cut(s)	240, 254
DpnII	GATC	2 cut(s)	238, 252
EaeI	YGGCCR	1 cut(s)	138
Eam1104I	CTCTTC	1 cut(s)	213
EarI	CTCTTC	1 cut(s)	213
Ecl136II	GAGCTC	1 cut(s)	382
Eco130I	CCWWGG	1 cut(s)	991
Eco24I	GRGCYC	1 cut(s)	384
Eco47I	GGWCC	2 cut(s)	531, 941
Eco53kI	GAGCTC	1 cut(s)	382
Eco91I	GGTNACC	1 cut(s)	386
EcoICRI	GAGCTC	1 cut(s)	382
EcoO109I	RGGNCCY	1 cut(s)	531
EcoO65I	GGTNACC	1 cut(s)	386
EcoRII	CCWGG	1 cut(s)	135
EcoT14I	CCWWGG	1 cut(s)	991
EcoT22I	ATGCAT	1 cut(s)	787
EcoT38I	GRGCYC	1 cut(s)	384
ErhI	CCWWGG	1 cut(s)	991
FaeI	CATG	5 cut(s)	253, 437, 525, 800, 823
FaqI	GGGAC	1 cut(s)	369
FatI	CATG	5 cut(s)	249, 433, 521, 796, 819
Fnu4HI	GCNGC	6 cut(s)	141, 144, 151, 165, 168, 594
FokI	GGATG	2 cut(s)	937, 994
FriOI	GRGCYC	1 cut(s)	384
Fsp4HI	GCNGC	6 cut(s)	141, 144, 151, 165, 168, 594
FspBI	CTAG	2 cut(s)	35, 147
GlaI	GCGC	2 cut(s)	408, 467
GluI	GCNGC	6 cut(s)	141, 144, 151, 165, 168, 594
GsuI	CTGGAG	1 cut(s)	779
HaeIII	GGCC	1 cut(s)	140
HapII	CCGG	2 cut(s)	92, 377
HhaI	GCGC	2 cut(s)	409, 468
Hin1II	CATG	5 cut(s)	253, 437, 525, 800, 823
Hin6I	GCGC	2 cut(s)	407, 466
HinP1I	GCGC	2 cut(s)	407, 466
HincII	GTYRAC	2 cut(s)	6, 270
HindII	GTYRAC	2 cut(s)	6, 270
HindIII	AAGCTT	1 cut(s)	412
HinfI	GANTC	5 cut(s)	46, 200, 357, 492, 751
HpaII	CCGG	2 cut(s)	92, 377
HphI	GGTGA	1 cut(s)	223
Hpy166II	GTNNAC	3 cut(s)	6, 270, 314
Hpy188I	TCNGA	4 cut(s)	45, 491, 900, 927
Hpy188III	TCNNGA	3 cut(s)	361, 377, 875
Hpy8I	GTNNAC	3 cut(s)	6, 270, 314
HpyAV	CCTTC	3 cut(s)	562, 685, 785
HpyCH4III	ACNGT	6 cut(s)	10, 182, 428, 687, 857, 912
HpyCH4IV	ACGT	1 cut(s)	66
HpyCH4V	TGCA	5 cut(s)	73, 288, 314, 775, 785
HpyF10VI	GCNNNNNNNGC	2 cut(s)	212, 221
HpyF3I	CTNAG	4 cut(s)	42, 410, 632, 924
HpySE526I	ACGT	1 cut(s)	66
Hsp92II	CATG	5 cut(s)	253, 437, 525, 800, 823
HspAI	GCGC	2 cut(s)	407, 466
Kpn2I	TCCGGA	1 cut(s)	376
KpnI	GGTACC	1 cut(s)	441
KspI	CCGCGG	1 cut(s)	144
Kzo9I	GATC	2 cut(s)	238, 252
LguI	GCTCTTC	1 cut(s)	213
LmnI	GCTCC	4 cut(s)	379, 509, 587, 743
Lsp1109I	GCAGC	4 cut(s)	137, 176, 179, 580
MaeI	CTAG	2 cut(s)	35, 147
MaeII	ACGT	1 cut(s)	66
MaeIII	GTNAC	2 cut(s)	28, 386
MalI	GATC	2 cut(s)	240, 254
MboI	GATC	2 cut(s)	238, 252
MboII	GAAGA	7 cut(s)	124, 200, 592, 805, 816, 863, 887
MhlI	GDGCHC	3 cut(s)	316, 368, 384
MluCI	AATT	8 cut(s)	50, 120, 452, 499, 669, 715, 726, 945
MlyI	GAGTC	2 cut(s)	209, 351
MmeI	TCCRAC	1 cut(s)	894
MnlI	CCTC	7 cut(s)	33, 69, 252, 353, 384, 756, 813
Mph1103I	ATGCAT	1 cut(s)	787
MroI	TCCGGA	1 cut(s)	376
MseI	TTAA	4 cut(s)	53, 155, 608, 968
MspA1I	CMGCKG	1 cut(s)	143
MspI	CCGG	2 cut(s)	92, 377
MspR9I	CCNGG	1 cut(s)	137
Mva1269I	GAATGC	1 cut(s)	903
MvaI	CCWGG	1 cut(s)	137
MvnI	CGCG	1 cut(s)	143
MwoI	GCNNNNNNNGC	2 cut(s)	212, 221
NdeII	GATC	2 cut(s)	238, 252
NheI	GCTAGC	1 cut(s)	146
NlaIII	CATG	5 cut(s)	253, 437, 525, 800, 823
NlaIV	GGNNCC	5 cut(s)	439, 511, 532, 583, 745
NsiI	ATGCAT	1 cut(s)	787
NspI	RCATGY	2 cut(s)	800, 823
PciI	ACATGT	1 cut(s)	819
PciSI	GCTCTTC	1 cut(s)	213
PcsI	WCGNNNNNNNCGW	1 cut(s)	466
PctI	GAATGC	1 cut(s)	903
PfeI	GAWTC	3 cut(s)	46, 492, 751
PflMI	CCANNNNNTGG	1 cut(s)	264
PkrI	GCNGC	6 cut(s)	142, 145, 152, 166, 169, 595
PleI	GAGTC	2 cut(s)	208, 351
PpsI	GAGTC	2 cut(s)	208, 351
PpuMI	RGGWCCY	1 cut(s)	531
PscI	ACATGT	1 cut(s)	819
Psp124BI	GAGCTC	1 cut(s)	384
Psp5II	RGGWCCY	1 cut(s)	531
Psp6I	CCWGG	1 cut(s)	135
PspEI	GGTNACC	1 cut(s)	386
PspGI	CCWGG	1 cut(s)	135
PspN4I	GGNNCC	5 cut(s)	439, 511, 532, 583, 745
PspPI	GGNCC	2 cut(s)	531, 941
PspPPI	RGGWCCY	1 cut(s)	531
RsaI	GTAC	1 cut(s)	439
RsaNI	GTAC	1 cut(s)	438
SacI	GAGCTC	1 cut(s)	384
SacII	CCGCGG	1 cut(s)	144
SapI	GCTCTTC	1 cut(s)	213
SaqAI	TTAA	4 cut(s)	53, 155, 608, 968
SatI	GCNGC	6 cut(s)	141, 144, 151, 165, 168, 594
Sau3AI	GATC	2 cut(s)	238, 252
Sau96I	GGNCC	2 cut(s)	531, 941
SchI	GAGTC	2 cut(s)	209, 351
ScrFI	CCNGG	1 cut(s)	137
SduI	GDGCHC	3 cut(s)	316, 368, 384
SfcI	CTRYAG	2 cut(s)	192, 847
Sfr303I	CCGCGG	1 cut(s)	144
SgrBI	CCGCGG	1 cut(s)	144
SinI	GGWCC	2 cut(s)	531, 941
SmlI	CTYRAG	1 cut(s)	415
SmoI	CTYRAG	1 cut(s)	415
Sse9I	AATT	8 cut(s)	50, 120, 452, 499, 669, 715, 726, 945
SsiI	CCGC	2 cut(s)	141, 143
SspI	AATATT	1 cut(s)	958
SspMI	CTAG	2 cut(s)	35, 147
SstI	GAGCTC	1 cut(s)	384
StyD4I	CCNGG	1 cut(s)	135
StyI	CCWWGG	1 cut(s)	991
TaaI	ACNGT	6 cut(s)	10, 182, 428, 687, 857, 912
TaiI	ACGT	1 cut(s)	69
TaqI	TCGA	2 cut(s)	555, 571
TasI	AATT	8 cut(s)	50, 120, 452, 499, 669, 715, 726, 945
TauI	GCSGC	2 cut(s)	143, 146
TfiI	GAWTC	3 cut(s)	46, 492, 751
Tru1I	TTAA	4 cut(s)	53, 155, 608, 968
Tru9I	TTAA	4 cut(s)	53, 155, 608, 968
TscAI	CASTG	1 cut(s)	241
TseI	GCWGC	4 cut(s)	150, 164, 167, 593
TspDTI	ATGAA	1 cut(s)	422
TspGWI	ACGGA	1 cut(s)	76
TspRI	CASTG	1 cut(s)	241
Van91I	CCANNNNNTGG	1 cut(s)	264
VneI	GTGCAC	1 cut(s)	312
VpaK11BI	GGWCC	2 cut(s)	531, 941
XapI	RAATTY	2 cut(s)	715, 726
XceI	RCATGY	2 cut(s)	800, 823
XspI	CTAG	2 cut(s)	35, 147
Zsp2I	ATGCAT	1 cut(s)	787

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.