Rmu_sc0011941.1_g000025

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011941.1
Physical Location & Seq
Reverse (-)
105494 .. 109140
3647 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011941.1_g000025.1.cds

Sequence Viewer

Length: 1008 bp
atggcagcacaaaccaagcttaacatcaccacagaccggtctgctcttcttgctctcaaagcccgtattaccagtgaccctcaaaacatgatcttcaccaactggtcaacctctactcctatttgtaactgggttggggtcacttgtggtgcacgccatcatcgaattgcagaattgaacctctcttactttggtcacacaggcaccattcctccggaattaggaaacttaccatttcttattaatatggacttcagcaataacagtttccatggtatattgcctcaggaattggctcgcttgcattggttgaagtttatcagcttgggaaacaacaagttcatgggagtcattccgtcatggtttgggtccttattcaaacttcaagtattcaatttgtttggtaatcaattttcaggttccataccagctacaatcttcaacttacctgctctgcaaaaaatagatttgagtgataaccaactctcagaaattccaaatgagatcggcactttgaatcatctggaaaaattgtatgtgcaacagaatgccttaaaagggcctatccctatgactatcttcaacatgtcatctttgactattgtaactttctatggtaacaatttgaatggtagaattcctgacaatatttgtcaaaatcttccgaatattcaagcgttgaatttgggtgccaatcaatttaatggtccaattccttccatatttgggcaatgcaaacaacttctttctttaaacttggagcttaactggttgacaggtcctataccatatgagattggttatcttccaaatttagtggaattgtcgcttgttacagtcaaatccatggtgacccaaggtcaagtcatcacctacaaagcggcggtggcctgggaacgtacccaacaagcctttggttatccaagacgtccaggtggctccgccgcaggccggagaggttcgcgtcaagattatctacaccgctctctcttgagatcctggtattga

Protein Analysis

335

Amino Acids

37.38

Weight (kDa)

9.41

Isoelectric Point (pI)

30.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000229)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13780 FvH4_1g13790 FvH4_3g37750
malus_domestica MD00G1192800.v1.1 MD02G1291700.v1.1 MD03G1180500.v1.1 MD03G1181600.v1.1 MD03G1181700.v1.1 MD03G1181900.v1.1 MD03G1182700.v1.1 MD03G1281400.v1.1 MD05G1297800.v1.1 MD05G1298300.v1.1 MD07G1034800.v1.1 MD10G1265200.v1.1 MD10G1277500.v1.1
prunus_persica Prupe.4G063500_v2.0.a1 Prupe.6G160500_v2.0.a1
pyrus_communis pycom04g04980 pycom05g27570 pycom05g27590 pycom10g25090
rosa_chinensis RchiOBHm_Chr2g0113621 RchiOBHm_Chr2g0113671 RchiOBHm_Chr2g0113771 RchiOBHm_Chr2g0113871 RchiOBHm_Chr2g0114031 RchiOBHm_Chr2g0114181 RchiOBHm_Chr2g0114201 RchiOBHm_Chr2g0114231 RchiOBHm_Chr2g0114241 RchiOBHm_Chr4g0403181 RchiOBHm_Chr4g0404251 RchiOBHm_Chr4g0404291 RchiOBHm_Chr4g0404471 RchiOBHm_Chr5g0010961 RchiOBHm_Chr5g0010971 RchiOBHm_Chr5g0010981 RchiOBHm_Chr5g0011131 RchiOBHm_Chr5g0011311 RchiOBHm_Chr5g0011321 RchiOBHm_Chr5g0011361 RchiOBHm_Chr5g0016031 RchiOBHm_Chr5g0040141 RchiOBHm_Chr5g0040411 RchiOBHm_Chr5g0040471 RchiOBHm_Chr5g0059151 RchiOBHm_Chr5g0059191 RchiOBHm_Chr6g0251861 RchiOBHm_Chr7g0213311 RchiOBHm_Chr7g0213321
rosa_laevigata RLG00000009001 RLG00000009062 RLG00000018075 RLG00000018085 RLG00000018097 RLG00000031818 RLG00000034199
rosa_multiflora Rmu_co7972198.1_g000001 Rmu_co8328773.1_g000001 Rmu_sc0000929.1_g000033 Rmu_sc0001023.1_g000056 Rmu_sc0001699.1_g000007 Rmu_sc0003151.1_g000028 Rmu_sc0003242.1_g000010 Rmu_sc0004283.1_g000012 Rmu_sc0004283.1_g000036 Rmu_sc0004283.1_g000048 Rmu_sc0004283.1_g000066 Rmu_sc0005187.1_g000011 Rmu_sc0007010.1_g000008 Rmu_sc0007109.1_g000001 Rmu_sc0008397.1_g000007 Rmu_sc0009151.1_g000001 Rmu_sc0009639.1_g000020 Rmu_sc0009975.1_g000007 Rmu_sc0009975.1_g000010 Rmu_sc0010543.1_g000006 Rmu_sc0011398.1_g000001 Rmu_sc0011941.1_g000025 Rmu_sc0013141.1_g000002 Rmu_sc0016457.1_g000002 Rmu_sc0038501.1_g000001 Rmu_ssc0000303.1_g000008
rosa_roxburghii Rroxscaffold_1G00040180 Rroxscaffold_1G00040280 Rroxscaffold_1G00040900 Rroxscaffold_1G00064830 Rroxscaffold_1G00065410 Rroxscaffold_2G00130010 Rroxscaffold_2G00130040
rosa_rugosa Rorug02G0188500 Rorug02G0188800 Rorug02G0188900 Rorug02G0189500 Rorug04G0458400 Rorug05G0184800
rosa_samantha Rh1CG253300 Rh2CG247500 Rh2CG247600 Rh2CG247900 Rh2CG248300 Rh2CG249100 Rh2CG249400 Rh2CG249800 Rh2CG249900 Rh2CG250000 Rh2CG250100 Rh2CG250200 Rh2CG262700 Rh4AG118100 Rh4AG118300 Rh4AG364100 Rh4BG106900 Rh4CG125100 Rh4DG110100 Rh4DG110500 Rh4DG110600 Rh4DG369800 Rh5CG093500 Rh5CG093600 Rh5CG093700 Rh5CG095300 Rh5CG095500 Rh5CG096100 Rh5CG096200 Rh5CG096400 Rh5CG099600 Rh5CG134600 Rh5CG421300 Rh6DG142900 Rh7AG370200
rosa_wichuraiana Rw0G001470 Rw0G014660 Rw0G017510 Rw0G017750 Rw1G005500 Rw2G018440 Rw2G018460 Rw2G018490 Rw2G019150 Rw4G009550 Rw5G007590 Rw5G007860 Rw6G001510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 931
Acc36I ACCTGC 1 cut(s) 457
AccB1I GGYRCC 2 cut(s) 203, 689
AccBSI CCGCTC 1 cut(s) 984
AccII CGCG 1 cut(s) 964
AccIII TCCGGA 1 cut(s) 214
AciI CCGC 5 cut(s) 881, 884, 942, 945, 982
AclWI GGATC 1 cut(s) 990
AcsI RAATTY 4 cut(s) 492, 636, 682, 811
AcuI CTGAAG 1 cut(s) 238
AcyI GRCGYC 1 cut(s) 928
AfaI GTAC 1 cut(s) 901
AfiI CCNNNNNNNGG 5 cut(s) 36, 221, 558, 726, 951
AflIII ACRYGT 1 cut(s) 585
AgeI ACCGGT 1 cut(s) 36
AhdI GACNNNNNGTC 1 cut(s) 858
AjnI CCWGG 3 cut(s) 890, 931, 998
AluBI AGCT 4 cut(s) 19, 324, 431, 763
AluI AGCT 4 cut(s) 19, 324, 431, 763
Alw21I GWGCWC 1 cut(s) 154
Alw44I GTGCAC 1 cut(s) 150
AlwI GGATC 1 cut(s) 990
Aor13HI TCCGGA 1 cut(s) 214
AoxI GGCC 3 cut(s) 560, 888, 949
ApaLI GTGCAC 1 cut(s) 150
ApeKI GCWGC 1 cut(s) 5
ApoI RAATTY 4 cut(s) 492, 636, 682, 811
AseI ATTAAT 1 cut(s) 243
AsiGI ACCGGT 1 cut(s) 36
AspS9I GGNCC 4 cut(s) 369, 560, 707, 779
AsuHPI GGTGA 4 cut(s) 19, 88, 862, 862
AvaII GGWCC 3 cut(s) 369, 707, 779
AxyI CCTNAGG 1 cut(s) 285
BaeGI GKGCMC 1 cut(s) 154
BanI GGYRCC 2 cut(s) 203, 689
Bbv12I GWGCWC 1 cut(s) 154
BbvI GCAGC 1 cut(s) 17
BccI CCATC 1 cut(s) 165
BciT130I CCWGG 3 cut(s) 892, 933, 1000
BfuAI ACCTGC 1 cut(s) 457
BisI GCNGC 3 cut(s) 6, 882, 945
BlsI GCNGC 3 cut(s) 7, 883, 946
Bme1390I CCNGG 3 cut(s) 892, 933, 1000
Bme18I GGWCC 3 cut(s) 369, 707, 779
BmeRI GACNNNNNGTC 1 cut(s) 858
BmgT120I GGNCC 4 cut(s) 369, 560, 707, 779
BmiI GGNNCC 5 cut(s) 205, 370, 421, 691, 940
BmrFI CCNGG 3 cut(s) 892, 933, 1000
BmrI ACTGGG 1 cut(s) 139
BmuI ACTGGG 1 cut(s) 139
BsaHI GRCGYC 1 cut(s) 928
BsaJI CCNNGG 4 cut(s) 271, 846, 856, 891
BsaWI WCCGGW 2 cut(s) 36, 214
BsaXI ACNNNNNCTCC 4 cut(s) 100, 130, 196, 226
Bsc4I CCNNNNNNNGG 5 cut(s) 36, 221, 558, 726, 951
Bse118I RCCGGY 1 cut(s) 36
Bse1I ACTGG 4 cut(s) 72, 107, 134, 773
Bse21I CCTNAGG 1 cut(s) 285
Bse3DI GCAATG 1 cut(s) 737
BseAI TCCGGA 1 cut(s) 214
BseBI CCWGG 3 cut(s) 892, 933, 1000
BseDI CCNNGG 4 cut(s) 271, 846, 856, 891
BseLI CCNNNNNNNGG 5 cut(s) 36, 221, 558, 726, 951
BseMI GCAATG 1 cut(s) 737
BseMII CTCAG 2 cut(s) 299, 501
BseNI ACTGG 4 cut(s) 72, 107, 134, 773
BseSI GKGCMC 1 cut(s) 154
BseXI GCAGC 1 cut(s) 17
Bsh1236I CGCG 1 cut(s) 964
BshFI GGCC 3 cut(s) 562, 890, 951
BshNI GGYRCC 2 cut(s) 203, 689
BshTI ACCGGT 1 cut(s) 36
BsiHKAI GWGCWC 1 cut(s) 154
BsiSI CCGG 3 cut(s) 37, 215, 952
BslI CCNNNNNNNGG 5 cut(s) 36, 221, 558, 726, 951
BsmI GAATGC 1 cut(s) 553
BsnI GGCC 3 cut(s) 562, 890, 951
Bsp1286I GDGCHC 1 cut(s) 154
Bsp13I TCCGGA 1 cut(s) 214
Bsp143I GATC 3 cut(s) 90, 504, 995
Bsp19I CCATGG 2 cut(s) 271, 846
BspACI CCGC 5 cut(s) 881, 884, 942, 945, 982
BspANI GGCC 3 cut(s) 562, 890, 951
BspCNI CTCAG 2 cut(s) 298, 500
BspEI TCCGGA 1 cut(s) 214
BspFNI CGCG 1 cut(s) 964
BspLI GGNNCC 5 cut(s) 205, 370, 421, 691, 940
BspMI ACCTGC 1 cut(s) 457
BspPI GGATC 1 cut(s) 990
BspQI GCTCTTC 1 cut(s) 51
BspT107I GGYRCC 2 cut(s) 203, 689
BsrBI CCGCTC 1 cut(s) 984
BsrDI GCAATG 1 cut(s) 737
BsrFI RCCGGY 1 cut(s) 36
BsrI ACTGG 4 cut(s) 72, 107, 134, 773
BssAI RCCGGY 1 cut(s) 36
BssECI CCNNGG 4 cut(s) 271, 846, 856, 891
BssMI GATC 3 cut(s) 90, 504, 995
BssNI GRCGYC 1 cut(s) 928
BssT1I CCWWGG 3 cut(s) 271, 846, 856
Bst2UI CCWGG 3 cut(s) 892, 933, 1000
Bst4CI ACNGT 2 cut(s) 266, 838
Bst6I CTCTTC 1 cut(s) 51
BstACI GRCGYC 1 cut(s) 928
BstC8I GCNNGC 4 cut(s) 154, 298, 302, 949
BstDEI CTNAG 2 cut(s) 285, 487
BstDSI CCRYGG 2 cut(s) 271, 846
BstEII GGTNACC 1 cut(s) 850
BstFNI CGCG 1 cut(s) 964
BstKTI GATC 3 cut(s) 93, 507, 998
BstMBI GATC 3 cut(s) 90, 504, 995
BstMWI GCNNNNNNNGC 3 cut(s) 50, 59, 887
BstNI CCWGG 3 cut(s) 892, 933, 1000
BstNSI RCATGY 1 cut(s) 589
BstPI GGTNACC 1 cut(s) 850
BstSCI CCNGG 3 cut(s) 890, 931, 998
BstSLI GKGCMC 1 cut(s) 154
BstUI CGCG 1 cut(s) 964
BstV1I GCAGC 1 cut(s) 17
BstX2I RGATCY 1 cut(s) 995
BstYI RGATCY 1 cut(s) 995
Bsu36I CCTNAGG 1 cut(s) 285
BsuRI GGCC 3 cut(s) 562, 890, 951
BtgI CCRYGG 2 cut(s) 271, 846
BtsIMutI CAGTG 1 cut(s) 79
BveI ACCTGC 1 cut(s) 457
Cac8I GCNNGC 4 cut(s) 154, 298, 302, 949
Cfr10I RCCGGY 1 cut(s) 36
Cfr13I GGNCC 4 cut(s) 369, 560, 707, 779
CseI GACGC 1 cut(s) 953
Csp6I GTAC 1 cut(s) 900
CspAI ACCGGT 1 cut(s) 36
CspCI CAANNNNNGTGG 2 cut(s) 798, 833
CviAII CATG 6 cut(s) 88, 272, 343, 360, 586, 847
CviQI GTAC 1 cut(s) 900
DdeI CTNAG 2 cut(s) 285, 487
DpnI GATC 3 cut(s) 92, 506, 997
DpnII GATC 3 cut(s) 90, 504, 995
DraI TTTAAA 1 cut(s) 753
DriI GACNNNNNGTC 1 cut(s) 858
Eam1104I CTCTTC 1 cut(s) 51
Eam1105I GACNNNNNGTC 1 cut(s) 858
EarI CTCTTC 1 cut(s) 51
EciI GGCGGA 1 cut(s) 931
Eco130I CCWWGG 3 cut(s) 271, 846, 856
Eco47I GGWCC 3 cut(s) 369, 707, 779
Eco57I CTGAAG 1 cut(s) 238
Eco81I CCTNAGG 1 cut(s) 285
Eco91I GGTNACC 1 cut(s) 850
EcoO109I RGGNCCY 3 cut(s) 369, 560, 779
EcoO65I GGTNACC 1 cut(s) 850
EcoRI GAATTC 1 cut(s) 636
EcoRII CCWGG 3 cut(s) 890, 931, 998
EcoT14I CCWWGG 3 cut(s) 271, 846, 856
ErhI CCWWGG 3 cut(s) 271, 846, 856
FaeI CATG 6 cut(s) 91, 275, 346, 363, 589, 850
FatI CATG 6 cut(s) 87, 271, 342, 359, 585, 846
FauNDI CATATG 1 cut(s) 790
Fnu4HI GCNGC 3 cut(s) 6, 882, 945
Fsp4HI GCNGC 3 cut(s) 6, 882, 945
GluI GCNGC 3 cut(s) 6, 882, 945
HaeIII GGCC 3 cut(s) 562, 890, 951
HapII CCGG 3 cut(s) 37, 215, 952
HgaI GACGC 1 cut(s) 953
Hin1I GRCGYC 1 cut(s) 928
Hin1II CATG 6 cut(s) 91, 275, 346, 363, 589, 850
HincII GTYRAC 2 cut(s) 108, 774
HindII GTYRAC 2 cut(s) 108, 774
HindIII AAGCTT 1 cut(s) 17
HinfI GANTC 2 cut(s) 348, 517
HpaII CCGG 3 cut(s) 37, 215, 952
HphI GGTGA 4 cut(s) 19, 88, 862, 862
Hpy166II GTNNAC 3 cut(s) 108, 152, 774
Hpy188I TCNGA 2 cut(s) 490, 666
Hpy188III TCNNGA 6 cut(s) 215, 287, 524, 641, 968, 991
Hpy8I GTNNAC 3 cut(s) 108, 152, 774
HpyAV CCTTC 1 cut(s) 726
HpyCH4III ACNGT 2 cut(s) 266, 838
HpyCH4IV ACGT 2 cut(s) 898, 928
HpyCH4V TGCA 6 cut(s) 152, 170, 304, 457, 541, 735
HpyF10VI GCNNNNNNNGC 3 cut(s) 50, 59, 887
HpyF3I CTNAG 2 cut(s) 285, 487
HpySE526I ACGT 2 cut(s) 898, 928
Hsp92I GRCGYC 1 cut(s) 928
Hsp92II CATG 6 cut(s) 91, 275, 346, 363, 589, 850
Kpn2I TCCGGA 1 cut(s) 214
Kzo9I GATC 3 cut(s) 90, 504, 995
LguI GCTCTTC 1 cut(s) 51
LmnI GCTCC 2 cut(s) 760, 944
Lsp1109I GCAGC 1 cut(s) 17
MaeII ACGT 2 cut(s) 898, 928
MaeIII GTNAC 8 cut(s) 74, 125, 139, 194, 604, 617, 832, 850
MalI GATC 3 cut(s) 92, 506, 997
MbiI CCGCTC 1 cut(s) 984
MboI GATC 3 cut(s) 90, 504, 995
MboII GAAGA 6 cut(s) 38, 85, 430, 571, 653, 797
MflI RGATCY 1 cut(s) 995
MhlI GDGCHC 1 cut(s) 154
MlyI GAGTC 1 cut(s) 357
MnlI CCTC 6 cut(s) 90, 121, 191, 222, 294, 950
MroI TCCGGA 1 cut(s) 214
MseI TTAA 6 cut(s) 21, 243, 554, 702, 752, 765
MspI CCGG 3 cut(s) 37, 215, 952
MspR9I CCNGG 3 cut(s) 892, 933, 1000
Mva1269I GAATGC 1 cut(s) 553
MvaI CCWGG 3 cut(s) 892, 933, 1000
MvnI CGCG 1 cut(s) 964
MwoI GCNNNNNNNGC 3 cut(s) 50, 59, 887
NcoI CCATGG 2 cut(s) 271, 846
NdeI CATATG 1 cut(s) 790
NdeII GATC 3 cut(s) 90, 504, 995
NlaIII CATG 6 cut(s) 91, 275, 346, 363, 589, 850
NlaIV GGNNCC 5 cut(s) 205, 370, 421, 691, 940
NmuCI GTSAC 4 cut(s) 74, 139, 194, 850
NspI RCATGY 1 cut(s) 589
PciI ACATGT 1 cut(s) 585
PciSI GCTCTTC 1 cut(s) 51
PcsI WCGNNNNNNNCGW 1 cut(s) 160
PctI GAATGC 1 cut(s) 553
PfeI GAWTC 1 cut(s) 517
PinAI ACCGGT 1 cut(s) 36
PkrI GCNGC 3 cut(s) 7, 883, 946
PleI GAGTC 1 cut(s) 356
PpsI GAGTC 1 cut(s) 356
PpuMI RGGWCCY 2 cut(s) 369, 779
PscI ACATGT 1 cut(s) 585
PshBI ATTAAT 1 cut(s) 243
Psp5II RGGWCCY 2 cut(s) 369, 779
Psp6I CCWGG 3 cut(s) 890, 931, 998
PspEI GGTNACC 1 cut(s) 850
PspGI CCWGG 3 cut(s) 890, 931, 998
PspN4I GGNNCC 5 cut(s) 205, 370, 421, 691, 940
PspPI GGNCC 4 cut(s) 369, 560, 707, 779
PspPPI RGGWCCY 2 cut(s) 369, 779
PsrI GAACNNNNNNTAC 2 cut(s) 170, 202
PsuI RGATCY 1 cut(s) 995
RsaI GTAC 1 cut(s) 901
RsaNI GTAC 1 cut(s) 900
SapI GCTCTTC 1 cut(s) 51
SaqAI TTAA 6 cut(s) 21, 243, 554, 702, 752, 765
SatI GCNGC 3 cut(s) 6, 882, 945
Sau3AI GATC 3 cut(s) 90, 504, 995
Sau96I GGNCC 4 cut(s) 369, 560, 707, 779
SchI GAGTC 1 cut(s) 357
ScrFI CCNGG 3 cut(s) 892, 933, 1000
SduI GDGCHC 1 cut(s) 154
SinI GGWCC 3 cut(s) 369, 707, 779
SmlI CTYRAG 1 cut(s) 991
SmoI CTYRAG 1 cut(s) 991
SsiI CCGC 5 cut(s) 881, 884, 942, 945, 982
SspI AATATT 2 cut(s) 649, 670
StyD4I CCNGG 3 cut(s) 890, 931, 998
StyI CCWWGG 3 cut(s) 271, 846, 856
TaaI ACNGT 2 cut(s) 266, 838
TaiI ACGT 2 cut(s) 901, 931
TaqI TCGA 1 cut(s) 163
TauI GCSGC 2 cut(s) 884, 947
TfiI GAWTC 1 cut(s) 517
Tru1I TTAA 6 cut(s) 21, 243, 554, 702, 752, 765
Tru9I TTAA 6 cut(s) 21, 243, 554, 702, 752, 765
TscAI CASTG 1 cut(s) 79
TseFI GTSAC 4 cut(s) 74, 139, 194, 850
TseI GCWGC 1 cut(s) 5
Tsp45I GTSAC 4 cut(s) 74, 139, 194, 850
TspDTI ATGAA 1 cut(s) 331
TspGWI ACGGA 1 cut(s) 345
TspRI CASTG 1 cut(s) 79
VneI GTGCAC 1 cut(s) 150
VpaK11BI GGWCC 3 cut(s) 369, 707, 779
VspI ATTAAT 1 cut(s) 243
XapI RAATTY 4 cut(s) 492, 636, 682, 811
XceI RCATGY 1 cut(s) 589
XcmI CCANNNNNNNNNTGG 1 cut(s) 911
ZraI GACGTC 1 cut(s) 929
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.