Rmu_sc0013141.1_g000002

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0013141.1
Physical Location & Seq
Reverse (-)
10765 .. 11367
603 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0013141.1_g000002.1.cds

Sequence Viewer

Length: 603 bp
atgaagagagttacttggttcttcctggtatacttgatctgttgtgaggcggctagctgcttgactacggcagcacaaacccaccttaacaccaccacagaccggtctgctcttattgctctaaaagcccatatcaccagtgaccctcaaaacatgatctttaccaattggtcaaccaccacccctgtttgcaactgggttggcgtcatttgtggtgcacgccatcatcgagtcgcagagttgaacctctcttactttggtctcgcgggcaccattcctcctgagctaggcaacttatcattgcttgttgatctggacatccagaataatagttttcggggtaccttgcctcacgaattggctcgcctgcgccgattgaagtttattaacttgggatacaacaagtttatgggagcaataccgtcatggcttgggtccttgtccaaacttcaagaattcatgttatttggtaatcaatttgcaggttccataccagctaccatcttcaacttatctgctctgcaaatatttaatctgaaatataaccaactctcaggtacgtacaaactaatgtatctaccaacaaattatctagaaccctaa

Protein Analysis

200

Amino Acids

22.44

Weight (kDa)

9.04

Isoelectric Point (pI)

24.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000229)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13780 FvH4_1g13790 FvH4_3g37750
malus_domestica MD00G1192800.v1.1 MD02G1291700.v1.1 MD03G1180500.v1.1 MD03G1181600.v1.1 MD03G1181700.v1.1 MD03G1181900.v1.1 MD03G1182700.v1.1 MD03G1281400.v1.1 MD05G1297800.v1.1 MD05G1298300.v1.1 MD07G1034800.v1.1 MD10G1265200.v1.1 MD10G1277500.v1.1
prunus_persica Prupe.4G063500_v2.0.a1 Prupe.6G160500_v2.0.a1
pyrus_communis pycom04g04980 pycom05g27570 pycom05g27590 pycom10g25090
rosa_chinensis RchiOBHm_Chr2g0113621 RchiOBHm_Chr2g0113671 RchiOBHm_Chr2g0113771 RchiOBHm_Chr2g0113871 RchiOBHm_Chr2g0114031 RchiOBHm_Chr2g0114181 RchiOBHm_Chr2g0114201 RchiOBHm_Chr2g0114231 RchiOBHm_Chr2g0114241 RchiOBHm_Chr4g0403181 RchiOBHm_Chr4g0404251 RchiOBHm_Chr4g0404291 RchiOBHm_Chr4g0404471 RchiOBHm_Chr5g0010961 RchiOBHm_Chr5g0010971 RchiOBHm_Chr5g0010981 RchiOBHm_Chr5g0011131 RchiOBHm_Chr5g0011311 RchiOBHm_Chr5g0011321 RchiOBHm_Chr5g0011361 RchiOBHm_Chr5g0016031 RchiOBHm_Chr5g0040141 RchiOBHm_Chr5g0040411 RchiOBHm_Chr5g0040471 RchiOBHm_Chr5g0059151 RchiOBHm_Chr5g0059191 RchiOBHm_Chr6g0251861 RchiOBHm_Chr7g0213311 RchiOBHm_Chr7g0213321
rosa_laevigata RLG00000009001 RLG00000009062 RLG00000018075 RLG00000018085 RLG00000018097 RLG00000031818 RLG00000034199
rosa_multiflora Rmu_co7972198.1_g000001 Rmu_co8328773.1_g000001 Rmu_sc0000929.1_g000033 Rmu_sc0001023.1_g000056 Rmu_sc0001699.1_g000007 Rmu_sc0003151.1_g000028 Rmu_sc0003242.1_g000010 Rmu_sc0004283.1_g000012 Rmu_sc0004283.1_g000036 Rmu_sc0004283.1_g000048 Rmu_sc0004283.1_g000066 Rmu_sc0005187.1_g000011 Rmu_sc0007010.1_g000008 Rmu_sc0007109.1_g000001 Rmu_sc0008397.1_g000007 Rmu_sc0009151.1_g000001 Rmu_sc0009639.1_g000020 Rmu_sc0009975.1_g000007 Rmu_sc0009975.1_g000010 Rmu_sc0010543.1_g000006 Rmu_sc0011398.1_g000001 Rmu_sc0011941.1_g000025 Rmu_sc0013141.1_g000002 Rmu_sc0016457.1_g000002 Rmu_sc0038501.1_g000001 Rmu_ssc0000303.1_g000008
rosa_roxburghii Rroxscaffold_1G00040180 Rroxscaffold_1G00040280 Rroxscaffold_1G00040900 Rroxscaffold_1G00064830 Rroxscaffold_1G00065410 Rroxscaffold_2G00130010 Rroxscaffold_2G00130040
rosa_rugosa Rorug02G0188500 Rorug02G0188800 Rorug02G0188900 Rorug02G0189500 Rorug04G0458400 Rorug05G0184800
rosa_samantha Rh1CG253300 Rh2CG247500 Rh2CG247600 Rh2CG247900 Rh2CG248300 Rh2CG249100 Rh2CG249400 Rh2CG249800 Rh2CG249900 Rh2CG250000 Rh2CG250100 Rh2CG250200 Rh2CG262700 Rh4AG118100 Rh4AG118300 Rh4AG364100 Rh4BG106900 Rh4CG125100 Rh4DG110100 Rh4DG110500 Rh4DG110600 Rh4DG369800 Rh5CG093500 Rh5CG093600 Rh5CG093700 Rh5CG095300 Rh5CG095500 Rh5CG096100 Rh5CG096200 Rh5CG096400 Rh5CG099600 Rh5CG134600 Rh5CG421300 Rh6DG142900 Rh7AG370200
rosa_wichuraiana Rw0G001470 Rw0G014660 Rw0G017510 Rw0G017750 Rw1G005500 Rw2G018440 Rw2G018460 Rw2G018490 Rw2G019150 Rw4G009550 Rw5G007590 Rw5G007860 Rw6G001510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 473
Acc65I GGTACC 1 cut(s) 341
AccB1I GGYRCC 2 cut(s) 269, 341
AccI GTMKAC 1 cut(s) 30
AccII CGCG 1 cut(s) 266
AciI CCGC 2 cut(s) 50, 266
AcsI RAATTY 1 cut(s) 455
AcyI GRCGYC 1 cut(s) 204
AfaI GTAC 3 cut(s) 343, 559, 563
AfiI CCNNNNNNNGG 2 cut(s) 102, 287
AgeI ACCGGT 1 cut(s) 102
AgsI TTSAA 4 cut(s) 244, 379, 452, 508
AjnI CCWGG 1 cut(s) 24
AluBI AGCT 3 cut(s) 57, 286, 497
AluI AGCT 3 cut(s) 57, 286, 497
Alw21I GWGCWC 1 cut(s) 220
Alw26I GTCTC 1 cut(s) 266
Alw44I GTGCAC 1 cut(s) 216
ApaLI GTGCAC 1 cut(s) 216
ApeKI GCWGC 2 cut(s) 57, 71
ApoI RAATTY 1 cut(s) 455
AsiGI ACCGGT 1 cut(s) 102
Asp718I GGTACC 1 cut(s) 341
AspLEI GCGC 1 cut(s) 372
AspS9I GGNCC 1 cut(s) 435
AsuHPI GGTGA 1 cut(s) 127
AsuNHI GCTAGC 1 cut(s) 53
AvaII GGWCC 1 cut(s) 435
BaeGI GKGCMC 2 cut(s) 220, 272
BaeI ACNNNNGTAYC 2 cut(s) 557, 590
BanI GGYRCC 2 cut(s) 269, 341
Bbv12I GWGCWC 1 cut(s) 220
BbvI GCAGC 2 cut(s) 44, 83
BccI CCATC 2 cut(s) 231, 509
BceAI ACGGC 1 cut(s) 84
BciT130I CCWGG 1 cut(s) 26
BciVI GTATCC 1 cut(s) 389
BcoDI GTCTC 1 cut(s) 266
BfaI CTAG 3 cut(s) 54, 287, 593
BfuAI ACCTGC 1 cut(s) 473
BfuI GTATCC 1 cut(s) 389
BisI GCNGC 3 cut(s) 51, 58, 72
BlsI GCNGC 3 cut(s) 52, 59, 73
Bme1390I CCNGG 1 cut(s) 26
Bme18I GGWCC 1 cut(s) 435
BmgT120I GGNCC 1 cut(s) 435
BmiI GGNNCC 4 cut(s) 271, 343, 436, 487
BmrFI CCNGG 1 cut(s) 26
BmrI ACTGGG 1 cut(s) 205
BmtI GCTAGC 1 cut(s) 57
BmuI ACTGGG 1 cut(s) 205
Bpu10I CCTNAGC 1 cut(s) 282
BsaAI YACGTR 1 cut(s) 561
BsaHI GRCGYC 1 cut(s) 204
BsaI GGTCTC 1 cut(s) 266
BsaWI WCCGGW 1 cut(s) 102
BsaXI ACNNNNNCTCC 2 cut(s) 262, 292
Bsc4I CCNNNNNNNGG 2 cut(s) 102, 287
Bse118I RCCGGY 1 cut(s) 102
Bse1I ACTGG 2 cut(s) 138, 200
Bse3DI GCAATG 1 cut(s) 299
BseBI CCWGG 1 cut(s) 26
BseGI GGATG 1 cut(s) 318
BseLI CCNNNNNNNGG 2 cut(s) 102, 287
BseMI GCAATG 1 cut(s) 299
BseMII CTCAG 2 cut(s) 273, 567
BseNI ACTGG 2 cut(s) 138, 200
BseSI GKGCMC 2 cut(s) 220, 272
BseXI GCAGC 2 cut(s) 44, 83
Bsh1236I CGCG 1 cut(s) 266
BshNI GGYRCC 2 cut(s) 269, 341
BshTI ACCGGT 1 cut(s) 102
BsiHKAI GWGCWC 1 cut(s) 220
BsiSI CCGG 1 cut(s) 103
BslI CCNNNNNNNGG 2 cut(s) 102, 287
BsmAI GTCTC 1 cut(s) 266
Bso31I GGTCTC 1 cut(s) 266
Bsp1286I GDGCHC 2 cut(s) 220, 272
Bsp143I GATC 3 cut(s) 36, 156, 310
BspACI CCGC 2 cut(s) 50, 266
BspCNI CTCAG 2 cut(s) 274, 566
BspFNI CGCG 1 cut(s) 266
BspLI GGNNCC 4 cut(s) 271, 343, 436, 487
BspMI ACCTGC 1 cut(s) 473
BspOI GCTAGC 1 cut(s) 57
BspT107I GGYRCC 2 cut(s) 269, 341
BspTNI GGTCTC 1 cut(s) 266
BsrDI GCAATG 1 cut(s) 299
BsrFI RCCGGY 1 cut(s) 102
BsrI ACTGG 2 cut(s) 138, 200
BssAI RCCGGY 1 cut(s) 102
BssMI GATC 3 cut(s) 36, 156, 310
BssNAI GTATAC 1 cut(s) 31
BssNI GRCGYC 1 cut(s) 204
Bst1107I GTATAC 1 cut(s) 31
Bst2UI CCWGG 1 cut(s) 26
Bst4CI ACNGT 1 cut(s) 423
BstACI GRCGYC 1 cut(s) 204
BstBAI YACGTR 1 cut(s) 561
BstC8I GCNNGC 5 cut(s) 55, 220, 268, 364, 368
BstDEI CTNAG 2 cut(s) 282, 553
BstENI CCTNNNNNAGG 1 cut(s) 285
BstF5I GGATG 1 cut(s) 318
BstFNI CGCG 1 cut(s) 266
BstHHI GCGC 1 cut(s) 372
BstKTI GATC 3 cut(s) 39, 159, 313
BstMAI GTCTC 1 cut(s) 266
BstMBI GATC 3 cut(s) 36, 156, 310
BstMWI GCNNNNNNNGC 2 cut(s) 116, 125
BstNI CCWGG 1 cut(s) 26
BstSCI CCNGG 1 cut(s) 24
BstSLI GKGCMC 2 cut(s) 220, 272
BstSNI TACGTA 1 cut(s) 561
BstUI CGCG 1 cut(s) 266
BstV1I GCAGC 2 cut(s) 44, 83
BstZ17I GTATAC 1 cut(s) 31
BsuI GTATCC 1 cut(s) 389
BtsCI GGATG 1 cut(s) 318
BtsIMutI CAGTG 1 cut(s) 145
BveI ACCTGC 1 cut(s) 473
Cac8I GCNNGC 5 cut(s) 55, 220, 268, 364, 368
CfoI GCGC 1 cut(s) 372
Cfr10I RCCGGY 1 cut(s) 102
Cfr13I GGNCC 1 cut(s) 435
CseI GACGC 1 cut(s) 193
Csp6I GTAC 3 cut(s) 342, 558, 562
CspAI ACCGGT 1 cut(s) 102
CviAII CATG 3 cut(s) 154, 426, 460
CviJI RGCY 7 cut(s) 53, 57, 128, 286, 362, 430, 497
CviKI_1 RGCY 7 cut(s) 53, 57, 128, 286, 362, 430, 497
CviQI GTAC 3 cut(s) 342, 558, 562
DdeI CTNAG 2 cut(s) 282, 553
DpnI GATC 3 cut(s) 38, 158, 312
DpnII GATC 3 cut(s) 36, 156, 310
Eco105I TACGTA 1 cut(s) 561
Eco31I GGTCTC 1 cut(s) 266
Eco47I GGWCC 1 cut(s) 435
EcoNI CCTNNNNNAGG 1 cut(s) 285
EcoO109I RGGNCCY 1 cut(s) 435
EcoRI GAATTC 1 cut(s) 455
EcoRII CCWGG 1 cut(s) 24
FaeI CATG 3 cut(s) 157, 429, 463
FaiI YATR 8 cut(s) 31, 132, 155, 410, 427, 461, 491, 543
FatI CATG 3 cut(s) 153, 425, 459
FauI CCCGC 1 cut(s) 259
FblI GTMKAC 1 cut(s) 30
Fnu4HI GCNGC 3 cut(s) 51, 58, 72
FokI GGATG 1 cut(s) 305
Fsp4HI GCNGC 3 cut(s) 51, 58, 72
FspBI CTAG 3 cut(s) 54, 287, 593
GlaI GCGC 1 cut(s) 371
GluI GCNGC 3 cut(s) 51, 58, 72
HapII CCGG 1 cut(s) 103
HgaI GACGC 1 cut(s) 193
HhaI GCGC 1 cut(s) 372
Hin1I GRCGYC 1 cut(s) 204
Hin1II CATG 3 cut(s) 157, 429, 463
Hin6I GCGC 1 cut(s) 370
HinP1I GCGC 1 cut(s) 370
HincII GTYRAC 1 cut(s) 174
HindII GTYRAC 1 cut(s) 174
HinfI GANTC 1 cut(s) 231
HpaII CCGG 1 cut(s) 103
HphI GGTGA 1 cut(s) 127
Hpy166II GTNNAC 3 cut(s) 31, 174, 218
Hpy188I TCNGA 1 cut(s) 537
Hpy188III TCNNGA 6 cut(s) 281, 314, 322, 353, 452, 593
Hpy8I GTNNAC 3 cut(s) 31, 174, 218
HpyCH4III ACNGT 1 cut(s) 423
HpyCH4IV ACGT 1 cut(s) 560
HpyCH4V TGCA 4 cut(s) 192, 218, 482, 523
HpyF10VI GCNNNNNNNGC 2 cut(s) 116, 125
HpyF3I CTNAG 2 cut(s) 282, 553
HpySE526I ACGT 1 cut(s) 560
Hsp92I GRCGYC 1 cut(s) 204
Hsp92II CATG 3 cut(s) 157, 429, 463
HspAI GCGC 1 cut(s) 370
KpnI GGTACC 1 cut(s) 345
Kzo9I GATC 3 cut(s) 36, 156, 310
LmnI GCTCC 1 cut(s) 413
Lsp1109I GCAGC 2 cut(s) 44, 83
MaeI CTAG 3 cut(s) 54, 287, 593
MaeII ACGT 1 cut(s) 560
MaeIII GTNAC 2 cut(s) 10, 140
MalI GATC 3 cut(s) 38, 158, 312
MboI GATC 3 cut(s) 36, 156, 310
MboII GAAGA 3 cut(s) 13, 16, 496
MfeI CAATTG 1 cut(s) 166
MhlI GDGCHC 2 cut(s) 220, 272
MluCI AATT 5 cut(s) 166, 356, 455, 476, 586
MlyI GAGTC 1 cut(s) 240
MnlI CCTC 5 cut(s) 40, 156, 257, 288, 360
MseI TTAA 3 cut(s) 87, 387, 531
MspI CCGG 1 cut(s) 103
MspR9I CCNGG 1 cut(s) 26
MunI CAATTG 1 cut(s) 166
MvaI CCWGG 1 cut(s) 26
MvnI CGCG 1 cut(s) 266
MwoI GCNNNNNNNGC 2 cut(s) 116, 125
NdeII GATC 3 cut(s) 36, 156, 310
NheI GCTAGC 1 cut(s) 53
NlaIII CATG 3 cut(s) 157, 429, 463
NlaIV GGNNCC 4 cut(s) 271, 343, 436, 487
NmuCI GTSAC 1 cut(s) 140
PcsI WCGNNNNNNNCGW 2 cut(s) 226, 370
PinAI ACCGGT 1 cut(s) 102
PkrI GCNGC 3 cut(s) 52, 59, 73
PleI GAGTC 1 cut(s) 239
PpsI GAGTC 1 cut(s) 239
Ppu21I YACGTR 1 cut(s) 561
PpuMI RGGWCCY 1 cut(s) 435
Psp5II RGGWCCY 1 cut(s) 435
Psp6I CCWGG 1 cut(s) 24
PspGI CCWGG 1 cut(s) 24
PspN4I GGNNCC 4 cut(s) 271, 343, 436, 487
PspPI GGNCC 1 cut(s) 435
PspPPI RGGWCCY 1 cut(s) 435
PsrI GAACNNNNNNTAC 2 cut(s) 236, 268
RsaI GTAC 3 cut(s) 343, 559, 563
RsaNI GTAC 3 cut(s) 342, 558, 562
SaqAI TTAA 3 cut(s) 87, 387, 531
SatI GCNGC 3 cut(s) 51, 58, 72
Sau3AI GATC 3 cut(s) 36, 156, 310
Sau96I GGNCC 1 cut(s) 435
SchI GAGTC 1 cut(s) 240
ScrFI CCNGG 1 cut(s) 26
SduI GDGCHC 2 cut(s) 220, 272
SetI ASST 9 cut(s) 59, 87, 249, 288, 347, 487, 499, 559, 563
SinI GGWCC 1 cut(s) 435
SnaBI TACGTA 1 cut(s) 561
Sse9I AATT 5 cut(s) 166, 356, 455, 476, 586
SsiI CCGC 2 cut(s) 50, 266
SspI AATATT 1 cut(s) 528
SspMI CTAG 3 cut(s) 54, 287, 593
StyD4I CCNGG 1 cut(s) 24
TaaI ACNGT 1 cut(s) 423
TaiI ACGT 1 cut(s) 563
TaqI TCGA 1 cut(s) 229
TasI AATT 5 cut(s) 166, 356, 455, 476, 586
TauI GCSGC 1 cut(s) 53
Tru1I TTAA 3 cut(s) 87, 387, 531
Tru9I TTAA 3 cut(s) 87, 387, 531
TscAI CASTG 1 cut(s) 145
TseFI GTSAC 1 cut(s) 140
TseI GCWGC 2 cut(s) 57, 71
Tsp45I GTSAC 1 cut(s) 140
TspDTI ATGAA 2 cut(s) 17, 448
TspRI CASTG 1 cut(s) 145
VneI GTGCAC 1 cut(s) 216
VpaK11BI GGWCC 1 cut(s) 435
XagI CCTNNNNNAGG 1 cut(s) 285
XapI RAATTY 1 cut(s) 455
XbaI TCTAGA 1 cut(s) 592
XmiI GTMKAC 1 cut(s) 30
XspI CTAG 3 cut(s) 54, 287, 593
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.