Rmu_co8328773.1_g000001

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8328773.1
Physical Location & Seq
Reverse (-)
1 .. 843
843 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8328773.1_g000001.1.cds

Sequence Viewer

Length: 631 bp
atggagaaaagccaaattctgtgggggatagctttgctggtggtttactattgttgcaccagtaacataaccatggctgcagcgcaaaccaacttcagcaccgaccagtctgctcttcttgctctcaaagcacgtatcaccgatgaccctcagaacaagatcttgaccaactggtcatccaactccgacgtttgcaactgggtcggggttacatgcggtgaacgccaccttagggtcgtatttttgaacctctctgtgtttcatctcactggcaccattcctccggagctaggaaacctgtcatttcttgctgggatgcgcctagaaaataacagcttccacggaactatcccaggggaattggctggtttgcggcgactcacgttgtttagcttcggattcaataactttgtgggagagattccactatggttggggtccttgtccaaactacaaatcctcaacttgtatggcaatgggttttcaggttcaatacccgcggttatcttcaacttgtctgcactacaagtacttgatctcagatataatcaactatcaggtaccataccgaaagaaattgggaacttaacaacgctgaagatgctgtacctagactcgaacaacatcaaag

Protein Analysis

210

Amino Acids

23.13

Weight (kDa)

7.68

Isoelectric Point (pI)

28.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000229)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13780 FvH4_1g13790 FvH4_3g37750
malus_domestica MD00G1192800.v1.1 MD02G1291700.v1.1 MD03G1180500.v1.1 MD03G1181600.v1.1 MD03G1181700.v1.1 MD03G1181900.v1.1 MD03G1182700.v1.1 MD03G1281400.v1.1 MD05G1297800.v1.1 MD05G1298300.v1.1 MD07G1034800.v1.1 MD10G1265200.v1.1 MD10G1277500.v1.1
prunus_persica Prupe.4G063500_v2.0.a1 Prupe.6G160500_v2.0.a1
pyrus_communis pycom04g04980 pycom05g27570 pycom05g27590 pycom10g25090
rosa_chinensis RchiOBHm_Chr2g0113621 RchiOBHm_Chr2g0113671 RchiOBHm_Chr2g0113771 RchiOBHm_Chr2g0113871 RchiOBHm_Chr2g0114031 RchiOBHm_Chr2g0114181 RchiOBHm_Chr2g0114201 RchiOBHm_Chr2g0114231 RchiOBHm_Chr2g0114241 RchiOBHm_Chr4g0403181 RchiOBHm_Chr4g0404251 RchiOBHm_Chr4g0404291 RchiOBHm_Chr4g0404471 RchiOBHm_Chr5g0010961 RchiOBHm_Chr5g0010971 RchiOBHm_Chr5g0010981 RchiOBHm_Chr5g0011131 RchiOBHm_Chr5g0011311 RchiOBHm_Chr5g0011321 RchiOBHm_Chr5g0011361 RchiOBHm_Chr5g0016031 RchiOBHm_Chr5g0040141 RchiOBHm_Chr5g0040411 RchiOBHm_Chr5g0040471 RchiOBHm_Chr5g0059151 RchiOBHm_Chr5g0059191 RchiOBHm_Chr6g0251861 RchiOBHm_Chr7g0213311 RchiOBHm_Chr7g0213321
rosa_laevigata RLG00000009001 RLG00000009062 RLG00000018075 RLG00000018085 RLG00000018097 RLG00000031818 RLG00000034199
rosa_multiflora Rmu_co7972198.1_g000001 Rmu_co8328773.1_g000001 Rmu_sc0000929.1_g000033 Rmu_sc0001023.1_g000056 Rmu_sc0001699.1_g000007 Rmu_sc0003151.1_g000028 Rmu_sc0003242.1_g000010 Rmu_sc0004283.1_g000012 Rmu_sc0004283.1_g000036 Rmu_sc0004283.1_g000048 Rmu_sc0004283.1_g000066 Rmu_sc0005187.1_g000011 Rmu_sc0007010.1_g000008 Rmu_sc0007109.1_g000001 Rmu_sc0008397.1_g000007 Rmu_sc0009151.1_g000001 Rmu_sc0009639.1_g000020 Rmu_sc0009975.1_g000007 Rmu_sc0009975.1_g000010 Rmu_sc0010543.1_g000006 Rmu_sc0011398.1_g000001 Rmu_sc0011941.1_g000025 Rmu_sc0013141.1_g000002 Rmu_sc0016457.1_g000002 Rmu_sc0038501.1_g000001 Rmu_ssc0000303.1_g000008
rosa_roxburghii Rroxscaffold_1G00040180 Rroxscaffold_1G00040280 Rroxscaffold_1G00040900 Rroxscaffold_1G00064830 Rroxscaffold_1G00065410 Rroxscaffold_2G00130010 Rroxscaffold_2G00130040
rosa_rugosa Rorug02G0188500 Rorug02G0188800 Rorug02G0188900 Rorug02G0189500 Rorug04G0458400 Rorug05G0184800
rosa_samantha Rh1CG253300 Rh2CG247500 Rh2CG247600 Rh2CG247900 Rh2CG248300 Rh2CG249100 Rh2CG249400 Rh2CG249800 Rh2CG249900 Rh2CG250000 Rh2CG250100 Rh2CG250200 Rh2CG262700 Rh4AG118100 Rh4AG118300 Rh4AG364100 Rh4BG106900 Rh4CG125100 Rh4DG110100 Rh4DG110500 Rh4DG110600 Rh4DG369800 Rh5CG093500 Rh5CG093600 Rh5CG093700 Rh5CG095300 Rh5CG095500 Rh5CG096100 Rh5CG096200 Rh5CG096400 Rh5CG099600 Rh5CG134600 Rh5CG421300 Rh6DG142900 Rh7AG370200
rosa_wichuraiana Rw0G001470 Rw0G014660 Rw0G017510 Rw0G017750 Rw1G005500 Rw2G018440 Rw2G018460 Rw2G018490 Rw2G019150 Rw4G009550 Rw5G007590 Rw5G007860 Rw6G001510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 172
Acc65I GGTACC 1 cut(s) 560
AccB1I GGYRCC 2 cut(s) 272, 560
AccII CGCG 1 cut(s) 500
AccIII TCCGGA 1 cut(s) 283
AciI CCGC 4 cut(s) 216, 373, 498, 500
AcsI RAATTY 1 cut(s) 15
AcuI CTGAAG 2 cut(s) 79, 617
AfaI GTAC 3 cut(s) 531, 562, 608
AfiI CCNNNNNNNGG 2 cut(s) 232, 290
AgsI TTSAA 4 cut(s) 247, 403, 492, 511
AjnI CCWGG 1 cut(s) 352
AluBI AGCT 4 cut(s) 32, 289, 336, 393
AluI AGCT 4 cut(s) 32, 289, 336, 393
Aor13HI TCCGGA 1 cut(s) 283
ApeKI GCWGC 2 cut(s) 77, 80
ApoI RAATTY 1 cut(s) 15
Asp718I GGTACC 1 cut(s) 560
AspLEI GCGC 2 cut(s) 85, 321
AspS9I GGNCC 1 cut(s) 438
AsuHPI GGTGA 2 cut(s) 130, 230
AvaII GGWCC 1 cut(s) 438
AxyI CCTNAGG 1 cut(s) 230
BanI GGYRCC 2 cut(s) 272, 560
BarI GAAGNNNNNNTAC 2 cut(s) 590, 622
BbvI GCAGC 2 cut(s) 64, 92
BcgI CGANNNNNNTGC 4 cut(s) 92, 126, 184, 218
BciT130I CCWGG 1 cut(s) 354
BfaI CTAG 3 cut(s) 290, 323, 611
BfmI CTRYAG 1 cut(s) 78
BglII AGATCT 1 cut(s) 159
BisI GCNGC 3 cut(s) 78, 81, 374
BlsI GCNGC 3 cut(s) 79, 82, 375
BmcAI AGTACT 1 cut(s) 531
Bme1390I CCNGG 1 cut(s) 354
Bme18I GGWCC 1 cut(s) 438
BmgT120I GGNCC 1 cut(s) 438
BmiI GGNNCC 3 cut(s) 274, 439, 562
BmrFI CCNGG 1 cut(s) 354
BmrI ACTGGG 1 cut(s) 208
BmsI GCATC 2 cut(s) 306, 591
BmuI ACTGGG 1 cut(s) 208
BsaAI YACGTR 1 cut(s) 134
BsaJI CCNNGG 5 cut(s) 72, 340, 352, 353, 498
BsaWI WCCGGW 1 cut(s) 283
BsaXI ACNNNNNCTCC 2 cut(s) 265, 295
Bsc4I CCNNNNNNNGG 2 cut(s) 232, 290
Bse1I ACTGG 5 cut(s) 60, 106, 176, 203, 274
Bse21I CCTNAGG 1 cut(s) 230
Bse3DI GCAATG 1 cut(s) 481
BseAI TCCGGA 1 cut(s) 283
BseBI CCWGG 1 cut(s) 354
BseDI CCNNGG 5 cut(s) 72, 340, 352, 353, 498
BseGI GGATG 2 cut(s) 176, 321
BseLI CCNNNNNNNGG 2 cut(s) 232, 290
BseMI GCAATG 1 cut(s) 481
BseMII CTCAG 2 cut(s) 164, 553
BseNI ACTGG 5 cut(s) 60, 106, 176, 203, 274
BseXI GCAGC 2 cut(s) 64, 92
BseYI CCCAGC 1 cut(s) 311
BsgI GTGCAG 1 cut(s) 504
Bsh1236I CGCG 1 cut(s) 500
BshNI GGYRCC 2 cut(s) 272, 560
BsiSI CCGG 1 cut(s) 284
BslI CCNNNNNNNGG 2 cut(s) 232, 290
Bsp13I TCCGGA 1 cut(s) 283
Bsp143I GATC 2 cut(s) 159, 535
Bsp19I CCATGG 1 cut(s) 72
BspACI CCGC 4 cut(s) 216, 373, 498, 500
BspCNI CTCAG 2 cut(s) 163, 552
BspEI TCCGGA 1 cut(s) 283
BspFNI CGCG 1 cut(s) 500
BspLI GGNNCC 3 cut(s) 274, 439, 562
BspMAI CTGCAG 1 cut(s) 82
BspQI GCTCTTC 1 cut(s) 120
BspT107I GGYRCC 2 cut(s) 272, 560
BsrDI GCAATG 1 cut(s) 481
BsrI ACTGG 5 cut(s) 60, 106, 176, 203, 274
BssECI CCNNGG 5 cut(s) 72, 340, 352, 353, 498
BssMI GATC 2 cut(s) 159, 535
BssT1I CCWWGG 1 cut(s) 72
Bst2UI CCWGG 1 cut(s) 354
Bst6I CTCTTC 1 cut(s) 120
BstBAI YACGTR 1 cut(s) 134
BstDEI CTNAG 3 cut(s) 150, 230, 539
BstDSI CCRYGG 3 cut(s) 72, 340, 498
BstF5I GGATG 2 cut(s) 176, 321
BstFNI CGCG 1 cut(s) 500
BstHHI GCGC 2 cut(s) 85, 321
BstKTI GATC 2 cut(s) 162, 538
BstMBI GATC 2 cut(s) 159, 535
BstMWI GCNNNNNNNGC 4 cut(s) 119, 128, 222, 601
BstNI CCWGG 1 cut(s) 354
BstNSI RCATGY 1 cut(s) 216
BstSCI CCNGG 1 cut(s) 352
BstSFI CTRYAG 1 cut(s) 78
BstUI CGCG 1 cut(s) 500
BstV1I GCAGC 2 cut(s) 64, 92
BstX2I RGATCY 1 cut(s) 159
BstYI RGATCY 1 cut(s) 159
Bsu36I CCTNAGG 1 cut(s) 230
BtgI CCRYGG 3 cut(s) 72, 340, 498
BtsCI GGATG 2 cut(s) 176, 321
BtsIMutI CAGTG 1 cut(s) 267
CfoI GCGC 2 cut(s) 85, 321
Cfr13I GGNCC 1 cut(s) 438
Cfr42I CCGCGG 1 cut(s) 501
Csp6I GTAC 3 cut(s) 530, 561, 607
CspCI CAANNNNNGTGG 3 cut(s) 37, 414, 449
CviAII CATG 2 cut(s) 73, 213
CviJI RGCY 7 cut(s) 12, 32, 77, 289, 336, 365, 393
CviKI_1 RGCY 7 cut(s) 12, 32, 77, 289, 336, 365, 393
CviQI GTAC 3 cut(s) 530, 561, 607
DdeI CTNAG 3 cut(s) 150, 230, 539
DpnI GATC 2 cut(s) 161, 537
DpnII GATC 2 cut(s) 159, 535
DrdI GACNNNNNNGTC 1 cut(s) 172
DseDI GACNNNNNNGTC 1 cut(s) 172
Eam1104I CTCTTC 1 cut(s) 120
EarI CTCTTC 1 cut(s) 120
Eco130I CCWWGG 1 cut(s) 72
Eco47I GGWCC 1 cut(s) 438
Eco57I CTGAAG 2 cut(s) 79, 617
Eco81I CCTNAGG 1 cut(s) 230
EcoO109I RGGNCCY 1 cut(s) 438
EcoRII CCWGG 1 cut(s) 352
EcoT14I CCWWGG 1 cut(s) 72
ErhI CCWWGG 1 cut(s) 72
FaeI CATG 2 cut(s) 76, 216
FaiI YATR 7 cut(s) 68, 74, 214, 430, 471, 546, 566
FatI CATG 2 cut(s) 72, 212
FauI CCCGC 1 cut(s) 505
Fnu4HI GCNGC 3 cut(s) 78, 81, 374
FokI GGATG 2 cut(s) 163, 328
Fsp4HI GCNGC 3 cut(s) 78, 81, 374
FspBI CTAG 3 cut(s) 290, 323, 611
GlaI GCGC 2 cut(s) 84, 320
GluI GCNGC 3 cut(s) 78, 81, 374
GsaI CCCAGC 1 cut(s) 315
HapII CCGG 1 cut(s) 284
HhaI GCGC 2 cut(s) 85, 321
Hin1II CATG 2 cut(s) 76, 216
Hin6I GCGC 2 cut(s) 83, 319
HinP1I GCGC 2 cut(s) 83, 319
HinfI GANTC 4 cut(s) 378, 399, 421, 614
HpaII CCGG 1 cut(s) 284
HphI GGTGA 2 cut(s) 130, 230
Hpy166II GTNNAC 2 cut(s) 46, 221
Hpy188I TCNGA 4 cut(s) 153, 187, 398, 542
Hpy188III TCNNGA 2 cut(s) 163, 284
Hpy8I GTNNAC 2 cut(s) 46, 221
Hpy99I CGWCG 1 cut(s) 191
HpyCH4IV ACGT 3 cut(s) 133, 189, 383
HpyCH4V TGCA 4 cut(s) 57, 80, 195, 521
HpyF10VI GCNNNNNNNGC 4 cut(s) 119, 128, 222, 601
HpyF3I CTNAG 3 cut(s) 150, 230, 539
HpySE526I ACGT 3 cut(s) 133, 189, 383
Hsp92II CATG 2 cut(s) 76, 216
HspAI GCGC 2 cut(s) 83, 319
Kpn2I TCCGGA 1 cut(s) 283
KpnI GGTACC 1 cut(s) 564
KspI CCGCGG 1 cut(s) 501
Kzo9I GATC 2 cut(s) 159, 535
LguI GCTCTTC 1 cut(s) 120
LmnI GCTCC 1 cut(s) 286
Lsp1109I GCAGC 2 cut(s) 64, 92
LweI GCATC 2 cut(s) 306, 591
MaeI CTAG 3 cut(s) 290, 323, 611
MaeII ACGT 3 cut(s) 133, 189, 383
MaeIII GTNAC 2 cut(s) 62, 208
MalI GATC 2 cut(s) 161, 537
MboI GATC 2 cut(s) 159, 535
MboII GAAGA 3 cut(s) 107, 499, 610
MflI RGATCY 1 cut(s) 159
MluCI AATT 3 cut(s) 15, 359, 576
MlyI GAGTC 2 cut(s) 372, 608
MmeI TCCRAC 2 cut(s) 204, 210
MnlI CCTC 4 cut(s) 159, 260, 291, 470
MroI TCCGGA 1 cut(s) 283
MseI TTAA 1 cut(s) 587
MslI CAYNNNNRTG 1 cut(s) 71
MspA1I CMGCKG 1 cut(s) 500
MspI CCGG 1 cut(s) 284
MspR9I CCNGG 1 cut(s) 354
MvaI CCWGG 1 cut(s) 354
MvnI CGCG 1 cut(s) 500
MwoI GCNNNNNNNGC 4 cut(s) 119, 128, 222, 601
NcoI CCATGG 1 cut(s) 72
NdeII GATC 2 cut(s) 159, 535
NlaIII CATG 2 cut(s) 76, 216
NlaIV GGNNCC 3 cut(s) 274, 439, 562
NspI RCATGY 1 cut(s) 216
PasI CCCWGGG 1 cut(s) 353
PciSI GCTCTTC 1 cut(s) 120
PfeI GAWTC 2 cut(s) 399, 421
PkrI GCNGC 3 cut(s) 79, 82, 375
PleI GAGTC 2 cut(s) 372, 608
PpsI GAGTC 2 cut(s) 372, 608
Ppu21I YACGTR 1 cut(s) 134
PpuMI RGGWCCY 1 cut(s) 438
Psp5II RGGWCCY 1 cut(s) 438
Psp6I CCWGG 1 cut(s) 352
PspFI CCCAGC 1 cut(s) 311
PspGI CCWGG 1 cut(s) 352
PspN4I GGNNCC 3 cut(s) 274, 439, 562
PspPI GGNCC 1 cut(s) 438
PspPPI RGGWCCY 1 cut(s) 438
PstI CTGCAG 1 cut(s) 82
PsuI RGATCY 1 cut(s) 159
RsaI GTAC 3 cut(s) 531, 562, 608
RsaNI GTAC 3 cut(s) 530, 561, 607
RseI CAYNNNNRTG 1 cut(s) 71
SacII CCGCGG 1 cut(s) 501
SapI GCTCTTC 1 cut(s) 120
SaqAI TTAA 1 cut(s) 587
SatI GCNGC 3 cut(s) 78, 81, 374
Sau3AI GATC 2 cut(s) 159, 535
Sau96I GGNCC 1 cut(s) 438
ScaI AGTACT 1 cut(s) 531
SchI GAGTC 2 cut(s) 372, 608
ScrFI CCNGG 1 cut(s) 354
SfaNI GCATC 2 cut(s) 306, 591
SfcI CTRYAG 1 cut(s) 78
Sfr303I CCGCGG 1 cut(s) 501
SgrBI CCGCGG 1 cut(s) 501
SinI GGWCC 1 cut(s) 438
SmiMI CAYNNNNRTG 1 cut(s) 71
Sse9I AATT 3 cut(s) 15, 359, 576
SsiI CCGC 4 cut(s) 216, 373, 498, 500
SspMI CTAG 3 cut(s) 290, 323, 611
StyD4I CCNGG 1 cut(s) 352
StyI CCWWGG 1 cut(s) 72
TaiI ACGT 3 cut(s) 136, 192, 386
TaqI TCGA 1 cut(s) 617
TasI AATT 3 cut(s) 15, 359, 576
TatI WGTACW 1 cut(s) 529
TauI GCSGC 1 cut(s) 376
TfiI GAWTC 2 cut(s) 399, 421
Tru1I TTAA 1 cut(s) 587
Tru9I TTAA 1 cut(s) 587
TscAI CASTG 1 cut(s) 274
TseI GCWGC 2 cut(s) 77, 80
TspDTI ATGAA 1 cut(s) 251
TspGWI ACGGA 1 cut(s) 357
TspRI CASTG 1 cut(s) 274
VpaK11BI GGWCC 1 cut(s) 438
XapI RAATTY 1 cut(s) 15
XceI RCATGY 1 cut(s) 216
XspI CTAG 3 cut(s) 290, 323, 611
ZrmI AGTACT 1 cut(s) 531
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.