FvH4_2g37070

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000079
Physical Location & Seq
Forward (+)
27054998 .. 27057231
2234 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g37070.t1

Sequence Viewer

Length: 1401 bp
ATGGGTGTTGCCAGAAAGAGGAAAACGGTAGAAAATTTGAGTCCGATTGACAGGATTAGTGCATTGCCTGATGAACTAGTTCGTCAAATACTTGGCCTCATGCCCACATTACATTCTGTGAGGACATCTGTTTTGTCCAAAAGATGGAACAAATTGTGGACCTCGGTTCCCAATCTGGACTTCAACGACCTAAGAGATTTTCCTAATGATAATGCCGATAATGATGTTCAACTTCGTCGTCCTCGTTGTGATCGTTTTGTAAGGTTCGTCAGCACTGTTCTCTATGCTCGGGACTCAATAGACATTGGCAAATTCTCTCTGTCAGTTCGCAGGCCCCATCATTTAGCTGTCATTGACGATTGGATTTGTGTAGCTGTTAGGCGTAATGTTGTTGATTTAAAATTTACTAATGTGCTTGAGACTACTTCTTTTTCGATACCTCAGTGCTTATTGATGTGCAAGACACTGATAGTTTTGGGGTTGCACGTGTGGGACTTCGACTTTGCTACTGATCCTATTCCTACATCAGGCTGTTTCCCAAGCCTGAAGGTCATCCGCGTTAGAGTATCTAGTGATAATCTATATCTGATGGAAAAGCTGTTTTCTTGCTGCCCTGTGCTTGAAGATCTAAGTATTGGCGGAATAGTGAATATTGGAGACACTGATATCGGTTACAATTTCAATGTTGTTGTGCCTGAAGTGAAGAAGCTGAACATGCGTCTTCAAGTGGGGATGGCGAGAAAAGGTTCTCGAAAGTATGAATTGGAACAGTTTGAGACTCGTATCAATGTTTATATCGATGCCCCAAAGCTTGAGAAACTTGATCTTAAAAAGGATGGTTTCATAAATTATGTTCTCATGGGGAGAGCCAAGTCCTTAATTAATGCCAGTATTGATGTCAAAGATTCTAGAGCAGAAAACCCGCCTCAGTTTCTCTCTTGTGCAATTGCGCTTCTGGTTGCTGTTTCTGATGTGAAATATCTATCTTTTGCGGCTCCTTGGTCAAAGGGTTGGCGTCTCCCTGCATTTGATAATTTGAAACAACTGAGGTTAGTTCTTGTGGATTGCAATTACTGGGAAGTGCTGCCTGAGTTTCTTCACTGTGCACCTAATCTCGAAGATTTGGTCTTAGAAAATGTAACGGAATGTGAAAGACGATATCCAAGGTGCGACTGGAATCTACCAAAGGATGTGCCTATTTGCTTGTTATCAAACCTGAAGGCCATCTCCATAAAAGGATTCAAGGGACAGTGGGCTGAGAGGGAAATAGCCAAGTATCTATTGAAGAATGGTTTATCTTTGCATAAGATGCTGATTTACACAGACGGTGTGTTTGCGGTGAGAGACTTCCACAAGGAGTTTTCCAATACGACCGGCCTAGTTGAGTTCATTCAGATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

467

Amino Acids

53.32

Weight (kDa)

8.67

Isoelectric Point (pI)

35.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 19 - 58 1.6e-08 F-box domain
LRR_At5g56370 PF24758 119 - 214 7.3e-11 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 395 - 439 3.8e-10 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 144
AccII CGCG 1 cut(s) 558
AciI CCGC 5 cut(s) 556, 639, 923, 992, 1337
AclWI GGATC 1 cut(s) 506
AcsI RAATTY 3 cut(s) 34, 311, 401
AcuI CTGAAG 3 cut(s) 566, 717, 1238
AcvI CACGTG 1 cut(s) 487
AcyI GRCGYC 1 cut(s) 1015
AfiI CCNNNNNNNGG 3 cut(s) 18, 144, 527
AflIII ACRYGT 1 cut(s) 486
AgsI TTSAA 8 cut(s) 184, 230, 623, 682, 725, 1039, 1243, 1285
AhlI ACTAGT 1 cut(s) 76
AjuI GAANNNNNNNTTGG 2 cut(s) 164, 196
AluBI AGCT 5 cut(s) 347, 374, 598, 709, 811
AluI AGCT 5 cut(s) 347, 374, 598, 709, 811
Alw21I GWGCWC 1 cut(s) 1108
Alw26I GTCTC 5 cut(s) 413, 651, 770, 1022, 1338
Alw44I GTGCAC 1 cut(s) 1104
AlwI GGATC 1 cut(s) 506
Ama87I CYCGRG 1 cut(s) 288
AoxI GGCC 4 cut(s) 94, 332, 1221, 1375
ApaLI GTGCAC 1 cut(s) 1104
ApeKI GCWGC 2 cut(s) 609, 1084
ApoI RAATTY 3 cut(s) 34, 311, 401
ArsI GACNNNNNNTTYG 8 cut(s) 115, 147, 485, 517, 1110, 1142, 1316, 1348
AseI ATTAAT 1 cut(s) 882
Asp700I GAANNNNTTC 2 cut(s) 78, 745
AspLEI GCGC 1 cut(s) 952
AspS9I GGNCC 2 cut(s) 159, 333
AsuHPI GGTGA 1 cut(s) 1351
AvaI CYCGRG 1 cut(s) 288
AvaII GGWCC 1 cut(s) 159
BaeGI GKGCMC 1 cut(s) 1108
BaeI ACNNNNGTAYC 2 cut(s) 428, 461
BbrPI CACGTG 1 cut(s) 487
BbsI GAAGAC 1 cut(s) 713
Bbv12I GWGCWC 1 cut(s) 1108
BbvI GCAGC 2 cut(s) 596, 1071
BccI CCATC 6 cut(s) 138, 345, 583, 727, 830, 1232
BcoDI GTCTC 5 cut(s) 413, 651, 770, 1022, 1338
BcuI ACTAGT 1 cut(s) 76
BfaI CTAG 4 cut(s) 77, 570, 909, 1379
BglII AGATCT 1 cut(s) 625
BisI GCNGC 3 cut(s) 610, 993, 1085
BlsI GCNGC 3 cut(s) 611, 994, 1086
Bme18I GGWCC 1 cut(s) 159
BmeT110I CYCGRG 1 cut(s) 288
BmgT120I GGNCC 2 cut(s) 159, 333
BmiI GGNNCC 3 cut(s) 168, 335, 996
BmrI ACTGGG 1 cut(s) 1084
BmsI GCATC 2 cut(s) 790, 1299
BmuI ACTGGG 1 cut(s) 1084
BpiI GAAGAC 1 cut(s) 713
BpuEI CTTGAG 2 cut(s) 437, 833
Bsa29I ATCGAT 1 cut(s) 798
BsaAI YACGTR 1 cut(s) 487
BsaHI GRCGYC 1 cut(s) 1015
BsaJI CCNNGG 3 cut(s) 162, 998, 1163
Bsc4I CCNNNNNNNGG 3 cut(s) 18, 144, 527
Bse118I RCCGGY 1 cut(s) 1373
Bse1I ACTGG 3 cut(s) 888, 1079, 1178
Bse3DI GCAATG 1 cut(s) 62
BseCI ATCGAT 1 cut(s) 798
BseDI CCNNGG 3 cut(s) 162, 998, 1163
BseGI GGATG 4 cut(s) 552, 738, 841, 1195
BseLI CCNNNNNNNGG 3 cut(s) 18, 144, 527
BseMI GCAATG 1 cut(s) 62
BseMII CTCAG 5 cut(s) 455, 941, 1037, 1080, 1248
BseNI ACTGG 3 cut(s) 888, 1079, 1178
BseSI GKGCMC 1 cut(s) 1108
BseXI GCAGC 2 cut(s) 596, 1071
Bsh1236I CGCG 1 cut(s) 558
Bsh1285I CGRYCG 1 cut(s) 1374
BshFI GGCC 4 cut(s) 96, 334, 1223, 1377
BshVI ATCGAT 1 cut(s) 798
BsiEI CGRYCG 1 cut(s) 1374
BsiHKAI GWGCWC 1 cut(s) 1108
BsiHKCI CYCGRG 1 cut(s) 288
BsiSI CCGG 1 cut(s) 1374
BslFI GGGAC 3 cut(s) 305, 506, 1260
BslI CCNNNNNNNGG 3 cut(s) 18, 144, 527
BsmAI GTCTC 5 cut(s) 413, 651, 770, 1022, 1338
BsmBI CGTCTC 1 cut(s) 1022
BsmFI GGGAC 3 cut(s) 305, 506, 1260
BsnI GGCC 4 cut(s) 96, 334, 1223, 1377
BsoBI CYCGRG 1 cut(s) 288
Bsp1286I GDGCHC 1 cut(s) 1108
Bsp143I GATC 4 cut(s) 250, 511, 625, 823
BspACI CCGC 5 cut(s) 556, 639, 923, 992, 1337
BspANI GGCC 4 cut(s) 96, 334, 1223, 1377
BspCNI CTCAG 5 cut(s) 454, 940, 1038, 1081, 1249
BspDI ATCGAT 1 cut(s) 798
BspFNI CGCG 1 cut(s) 558
BspLI GGNNCC 3 cut(s) 168, 335, 996
BspPI GGATC 1 cut(s) 506
BsrDI GCAATG 1 cut(s) 62
BsrFI RCCGGY 1 cut(s) 1373
BsrI ACTGG 3 cut(s) 888, 1079, 1178
BssAI RCCGGY 1 cut(s) 1373
BssECI CCNNGG 3 cut(s) 162, 998, 1163
BssMI GATC 4 cut(s) 250, 511, 625, 823
BssNI GRCGYC 1 cut(s) 1015
BssT1I CCWWGG 2 cut(s) 998, 1163
Bst4CI ACNGT 6 cut(s) 28, 277, 771, 1103, 1251, 1328
BstACI GRCGYC 1 cut(s) 1015
BstAPI GCANNNNNTGC 1 cut(s) 1309
BstBAI YACGTR 1 cut(s) 487
BstC8I GCNNGC 1 cut(s) 332
BstDEI CTNAG 8 cut(s) 191, 441, 629, 927, 1046, 1089, 1129, 1257
BstENI CCTNNNNNAGG 1 cut(s) 525
BstF5I GGATG 4 cut(s) 552, 738, 841, 1195
BstFNI CGCG 1 cut(s) 558
BstHHI GCGC 1 cut(s) 952
BstKTI GATC 4 cut(s) 253, 514, 628, 826
BstMAI GTCTC 5 cut(s) 413, 651, 770, 1022, 1338
BstMBI GATC 4 cut(s) 250, 511, 625, 823
BstMCI CGRYCG 1 cut(s) 1374
BstMWI GCNNNNNNNGC 2 cut(s) 715, 1309
BstNSI RCATGY 1 cut(s) 718
BstSLI GKGCMC 1 cut(s) 1108
BstUI CGCG 1 cut(s) 558
BstV1I GCAGC 2 cut(s) 596, 1071
BstV2I GAAGAC 1 cut(s) 713
BstX2I RGATCY 1 cut(s) 625
BstYI RGATCY 1 cut(s) 625
Bsu15I ATCGAT 1 cut(s) 798
BsuRI GGCC 4 cut(s) 96, 334, 1223, 1377
BsuTUI ATCGAT 1 cut(s) 798
BtsCI GGATG 4 cut(s) 552, 738, 841, 1195
BtsIMutI CAGTG 6 cut(s) 273, 449, 464, 660, 1099, 1256
Cac8I GCNNGC 1 cut(s) 332
CfoI GCGC 1 cut(s) 952
Cfr10I RCCGGY 1 cut(s) 1373
Cfr13I GGNCC 2 cut(s) 159, 333
ClaI ATCGAT 1 cut(s) 798
CseI GACGC 2 cut(s) 707, 1004
CviAII CATG 3 cut(s) 100, 715, 859
DdeI CTNAG 8 cut(s) 191, 441, 629, 927, 1046, 1089, 1129, 1257
DpnI GATC 4 cut(s) 252, 513, 627, 825
DpnII GATC 4 cut(s) 250, 511, 625, 823
DraI TTTAAA 1 cut(s) 399
EciI GGCGGA 1 cut(s) 654
Eco130I CCWWGG 2 cut(s) 998, 1163
Eco32I GATATC 2 cut(s) 667, 1160
Eco47I GGWCC 1 cut(s) 159
Eco57I CTGAAG 3 cut(s) 566, 717, 1238
Eco72I CACGTG 1 cut(s) 487
Eco88I CYCGRG 1 cut(s) 288
EcoNI CCTNNNNNAGG 1 cut(s) 525
EcoO109I RGGNCCY 1 cut(s) 333
EcoRV GATATC 2 cut(s) 667, 1160
EcoT14I CCWWGG 2 cut(s) 998, 1163
ErhI CCWWGG 2 cut(s) 998, 1163
Esp3I CGTCTC 1 cut(s) 1022
FaeI CATG 3 cut(s) 103, 718, 862
FaqI GGGAC 3 cut(s) 305, 506, 1260
FatI CATG 3 cut(s) 99, 714, 858
FauI CCCGC 1 cut(s) 930
Fnu4HI GCNGC 3 cut(s) 610, 993, 1085
FokI GGATG 4 cut(s) 539, 745, 848, 1202
Fsp4HI GCNGC 3 cut(s) 610, 993, 1085
FspBI CTAG 4 cut(s) 77, 570, 909, 1379
GlaI GCGC 1 cut(s) 951
GluI GCNGC 3 cut(s) 610, 993, 1085
HaeIII GGCC 4 cut(s) 96, 334, 1223, 1377
HapII CCGG 1 cut(s) 1374
HgaI GACGC 2 cut(s) 707, 1004
HhaI GCGC 1 cut(s) 952
Hin1I GRCGYC 1 cut(s) 1015
Hin1II CATG 3 cut(s) 103, 718, 862
Hin6I GCGC 1 cut(s) 950
HinP1I GCGC 1 cut(s) 950
HindIII AAGCTT 1 cut(s) 809
HinfI GANTC 6 cut(s) 40, 293, 778, 905, 1177, 1239
HpaII CCGG 1 cut(s) 1374
HphI GGTGA 1 cut(s) 1351
Hpy166II GTNNAC 2 cut(s) 159, 1106
Hpy188I TCNGA 4 cut(s) 45, 588, 970, 1395
Hpy188III TCNNGA 5 cut(s) 176, 290, 750, 909, 1115
Hpy8I GTNNAC 2 cut(s) 159, 1106
Hpy99I CGWCG 1 cut(s) 240
HpyAV CCTTC 2 cut(s) 541, 1213
HpyCH4III ACNGT 6 cut(s) 28, 277, 771, 1103, 1251, 1328
HpyCH4IV ACGT 1 cut(s) 486
HpyCH4V TGCA 8 cut(s) 62, 459, 484, 944, 1025, 1068, 1106, 1303
HpyF10VI GCNNNNNNNGC 2 cut(s) 715, 1309
HpyF3I CTNAG 8 cut(s) 191, 441, 629, 927, 1046, 1089, 1129, 1257
HpySE526I ACGT 1 cut(s) 486
Hsp92I GRCGYC 1 cut(s) 1015
Hsp92II CATG 3 cut(s) 103, 718, 862
HspAI GCGC 1 cut(s) 950
Kzo9I GATC 4 cut(s) 250, 511, 625, 823
LmnI GCTCC 1 cut(s) 1000
Lsp1109I GCAGC 2 cut(s) 596, 1071
LweI GCATC 2 cut(s) 790, 1299
MaeI CTAG 4 cut(s) 77, 570, 909, 1379
MaeII ACGT 1 cut(s) 486
MaeIII GTNAC 2 cut(s) 671, 1138
MalI GATC 4 cut(s) 252, 513, 627, 825
MboI GATC 4 cut(s) 250, 511, 625, 823
MboII GAAGA 6 cut(s) 635, 713, 715, 1088, 1130, 1297
MfeI CAATTG 1 cut(s) 945
MflI RGATCY 1 cut(s) 625
MhlI GDGCHC 1 cut(s) 1108
MlyI GAGTC 3 cut(s) 49, 287, 772
MnlI CCTC 9 cut(s) 12, 107, 114, 172, 252, 450, 936, 1041, 1254
MroXI GAANNNNTTC 2 cut(s) 78, 745
MseI TTAA 4 cut(s) 398, 828, 878, 882
MslI CAYNNNNRTG 1 cut(s) 1394
MspI CCGG 1 cut(s) 1374
MunI CAATTG 1 cut(s) 945
MvnI CGCG 1 cut(s) 558
MwoI GCNNNNNNNGC 2 cut(s) 715, 1309
NdeII GATC 4 cut(s) 250, 511, 625, 823
NlaIII CATG 3 cut(s) 103, 718, 862
NlaIV GGNNCC 3 cut(s) 168, 335, 996
NspI RCATGY 1 cut(s) 718
PacI TTAATTAA 1 cut(s) 882
PcsI WCGNNNNNNNCGW 2 cut(s) 241, 250
PdmI GAANNNNTTC 2 cut(s) 78, 745
PfeI GAWTC 3 cut(s) 905, 1177, 1239
PflMI CCANNNNNTGG 1 cut(s) 144
PkrI GCNGC 3 cut(s) 611, 994, 1086
PleI GAGTC 3 cut(s) 48, 287, 772
PmaCI CACGTG 1 cut(s) 487
PmlI CACGTG 1 cut(s) 487
PpsI GAGTC 3 cut(s) 48, 287, 772
Ppu21I YACGTR 1 cut(s) 487
PshBI ATTAAT 1 cut(s) 882
PspCI CACGTG 1 cut(s) 487
PspN4I GGNNCC 3 cut(s) 168, 335, 996
PspPI GGNCC 2 cut(s) 159, 333
PsuI RGATCY 1 cut(s) 625
RseI CAYNNNNRTG 1 cut(s) 1394
SaqAI TTAA 4 cut(s) 398, 828, 878, 882
SatI GCNGC 3 cut(s) 610, 993, 1085
Sau3AI GATC 4 cut(s) 250, 511, 625, 823
Sau96I GGNCC 2 cut(s) 159, 333
SchI GAGTC 3 cut(s) 49, 287, 772
SduI GDGCHC 1 cut(s) 1108
SfaNI GCATC 2 cut(s) 790, 1299
SinI GGWCC 1 cut(s) 159
SmiMI CAYNNNNRTG 1 cut(s) 1394
SmlI CTYRAG 2 cut(s) 416, 812
SmoI CTYRAG 2 cut(s) 416, 812
SpeI ACTAGT 1 cut(s) 76
SsiI CCGC 5 cut(s) 556, 639, 923, 992, 1337
SspI AATATT 1 cut(s) 652
SspMI CTAG 4 cut(s) 77, 570, 909, 1379
StyI CCWWGG 2 cut(s) 998, 1163
TaaI ACNGT 6 cut(s) 28, 277, 771, 1103, 1251, 1328
TaiI ACGT 1 cut(s) 489
TaqI TCGA 5 cut(s) 434, 498, 751, 798, 1116
TauI GCSGC 1 cut(s) 995
TfiI GAWTC 3 cut(s) 905, 1177, 1239
Tru1I TTAA 4 cut(s) 398, 828, 878, 882
Tru9I TTAA 4 cut(s) 398, 828, 878, 882
TscAI CASTG 6 cut(s) 280, 449, 471, 667, 1106, 1256
TseI GCWGC 2 cut(s) 609, 1084
TspDTI ATGAA 4 cut(s) 87, 774, 832, 1378
TspGWI ACGGA 1 cut(s) 1157
TspRI CASTG 6 cut(s) 280, 449, 471, 667, 1106, 1256
Van91I CCANNNNNTGG 1 cut(s) 144
VneI GTGCAC 1 cut(s) 1104
VpaK11BI GGWCC 1 cut(s) 159
VspI ATTAAT 1 cut(s) 882
XagI CCTNNNNNAGG 1 cut(s) 525
XapI RAATTY 3 cut(s) 34, 311, 401
XbaI TCTAGA 1 cut(s) 908
XceI RCATGY 1 cut(s) 718
XcmI CCANNNNNNNNNTGG 1 cut(s) 1170
XmnI GAANNNNTTC 2 cut(s) 78, 745
XspI CTAG 4 cut(s) 77, 570, 909, 1379
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.