Rh5DG200700

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0000079
Physical Location & Seq
Forward (+)
22303360 .. 22305149
1790 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG200700.1

Sequence Viewer

Length: 1398 bp
ATGGCTTCCGAGTCCAAGCGTCAAAGTGGAGTTGATAGAATCAGTGAATTGCCGGATGCAGTTCTTTGTCACATATTTTCCTTTCTTCCTACAATATATGCTATGTGGACCACTGTTCTGTCTAGGAGATGGAACAATTTATGGACATCTCTTCCAAACCTTAGCTTCGATAACAAAGATTTTCCTACAAATCATACAATGTCTCCAATCCAGTCCTTCAAGCATTTTATGAGTGCTGTTGAAGGTGCACTTTCCCTTCACTGCTTATCAGACATTCGAAAGTTTTGTCTTTCTATTTCTGTAGAACACTTCAGTGTTGAGGATCTCTCTCGAATCAATAGTTTGATTTACTCTGCCATTAGGCATAATGTAGTCGAAATGAATCTTTCTTTCTGGGCTGAAGATTATATGAAGGATCCTTTTATACTGCCTCAAAGCCTTTTCATGTGCACAACACTGGAGGATCTGAAAGTCTTCTCAGATTTTAATACTTGTGCTCCAACCACAACAGGGAACCTCCCAAGTCTCAAGGTTCTCCATGTTTCAGTTTTATGGTCTGATGAGAATGCACCAGAATCTTTTTTCCAGAACTGCCCCGTACTTGAAGATTTAACTATAGCTGGAAGCATCTGTTTTCATGACATTGACTATATCAATATCACTGCACATGCATTGAAGAGGCTACGAATATCGTTGCGCTGTTACCATGAATATTATGATAGTTGGTACACTTTTTTTATTAATGCTCCAAACATGGAATACTTTGATCTCAAGGAGGATGCTTTCTCAAATTATATTTTCAAGAATACTAAATCCCTAGTCAAAGCCAAAGTCCATTTTCTTGACGAAATTCAATACCAAGATGAGATGGGAGCCTTTTATGATAAAGATCCTGGCTTCGCTAATCGTGCAACTGTGCTGCTGGCAGGAATTTCCAATGTTGAATATCTGTCTCTTGATAACCAGCCTCATTGTTTGGAGGTTTGCTATGTGCCTGCTTTGGATAATCTGACCAAATTGAAGCTGGTTCTTCATGACTGCTACCACTGGGAACTGCTAACAGAGTTGCTCATCAGATCCCCTAAACTGAAATATCTTGTCTTAGAGCATATCCACACCAATGTGGATAACAAATACCCAGAGCAATCAGAAAGTCGATGGAATCCACCAGACTTTGTGCCTATTTGTTTGCTCTCACGCCTTAAGACGATAAAAATAAGGGGATTCAAGGGAAAGCGTGATGAGATGGAAGTGGCGCAGTATTTGCTAAAGAACAGTGATGTTTTGAATGAGATGGCTATTTATACAGGTGATCTTCAGTGTACAAAGGAAGAGTTTATTGAGGAATTTGGTATGTTTCAAAGGGGTTCAAAGGCTTGTAAAGTTCTCTTTAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

465

Amino Acids

53.87

Weight (kDa)

5.53

Isoelectric Point (pI)

50.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 14 - 53 3e-08 F-box domain
LRR_At1g61320_AtMIF1 PF23622 86 - 436 3e-10 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 121 - 258 1.1e-08 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 390 - 434 1.4e-14 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 6 cut(s) 330, 410, 423, 471, 884, 1071
AcsI RAATTY 3 cut(s) 849, 930, 1346
AcuI CTGAAG 3 cut(s) 295, 420, 1301
AfaI GTAC 3 cut(s) 600, 728, 1324
AfiI CCNNNNNNNGG 1 cut(s) 510
AflII CTTAAG 1 cut(s) 1202
AjnI CCWGG 1 cut(s) 892
AleI CACNNNNGTG 2 cut(s) 312, 1121
AluBI AGCT 3 cut(s) 165, 620, 1024
AluI AGCT 3 cut(s) 165, 620, 1024
Alw21I GWGCWC 3 cut(s) 250, 452, 499
Alw26I GTCTC 3 cut(s) 207, 530, 957
Alw44I GTGCAC 2 cut(s) 246, 448
AlwI GGATC 6 cut(s) 330, 410, 423, 471, 884, 1071
ApaLI GTGCAC 2 cut(s) 246, 448
ApeKI GCWGC 1 cut(s) 919
ApoI RAATTY 3 cut(s) 849, 930, 1346
ArsI GACNNNNNNTTYG 4 cut(s) 271, 303, 816, 848
AseI ATTAAT 1 cut(s) 741
Asp700I GAANNNNTTC 1 cut(s) 473
AspLEI GCGC 2 cut(s) 699, 1258
AspS9I GGNCC 1 cut(s) 108
AsuHPI GGTGA 1 cut(s) 1322
AsuII TTCGAA 1 cut(s) 277
AvaII GGWCC 1 cut(s) 108
BaeGI GKGCMC 2 cut(s) 250, 452
BamHI GGATCC 1 cut(s) 415
BbsI GAAGAC 1 cut(s) 466
Bbv12I GWGCWC 3 cut(s) 250, 452, 499
BbvI GCAGC 1 cut(s) 906
BccI CCATC 5 cut(s) 123, 862, 1152, 1240, 1288
BciT130I CCWGG 1 cut(s) 894
BcoDI GTCTC 3 cut(s) 207, 530, 957
BfaI CTAG 2 cut(s) 123, 818
BfmI CTRYAG 2 cut(s) 300, 615
BfrI CTTAAG 1 cut(s) 1202
BisI GCNGC 1 cut(s) 920
BlsI GCNGC 1 cut(s) 921
Bme1390I CCNGG 1 cut(s) 894
Bme18I GGWCC 1 cut(s) 108
BmgT120I GGNCC 1 cut(s) 108
BmiI GGNNCC 3 cut(s) 417, 515, 874
BmrFI CCNGG 1 cut(s) 894
BmrI ACTGGG 1 cut(s) 1057
BmsI GCATC 3 cut(s) 46, 636, 769
BmuI ACTGGG 1 cut(s) 1057
BpiI GAAGAC 1 cut(s) 466
BplI GAGNNNNNCTC 2 cut(s) 311, 343
BpmI CTGGAG 1 cut(s) 479
Bpu10I CCTNAGC 1 cut(s) 161
Bpu14I TTCGAA 1 cut(s) 277
BpuEI CTTGAG 2 cut(s) 512, 755
BsaBI GATNNNNATC 1 cut(s) 888
BsaXI ACNNNNNCTCC 4 cut(s) 187, 217, 481, 511
Bsc4I CCNNNNNNNGG 1 cut(s) 510
Bse1I ACTGG 3 cut(s) 211, 462, 1052
Bse8I GATNNNNATC 1 cut(s) 888
BseBI CCWGG 1 cut(s) 894
BseGI GGATG 2 cut(s) 61, 784
BseJI GATNNNNATC 1 cut(s) 888
BseLI CCNNNNNNNGG 1 cut(s) 510
BseMII CTCAG 1 cut(s) 492
BseNI ACTGG 3 cut(s) 211, 462, 1052
BseSI GKGCMC 2 cut(s) 250, 452
BseXI GCAGC 1 cut(s) 906
BsgI GTGCAG 1 cut(s) 648
BsiHKAI GWGCWC 3 cut(s) 250, 452, 499
BsiSI CCGG 1 cut(s) 53
BslI CCNNNNNNNGG 1 cut(s) 510
BsmAI GTCTC 3 cut(s) 207, 530, 957
BsmI GAATGC 1 cut(s) 571
Bsp119I TTCGAA 1 cut(s) 277
Bsp1286I GDGCHC 3 cut(s) 250, 452, 499
Bsp1407I TGTACA 1 cut(s) 1322
Bsp143I GATC 7 cut(s) 322, 415, 463, 766, 889, 1076, 1312
BspCNI CTCAG 1 cut(s) 491
BspHI TCATGA 2 cut(s) 637, 1033
BspLI GGNNCC 3 cut(s) 417, 515, 874
BspPI GGATC 6 cut(s) 330, 410, 423, 471, 884, 1071
BspT104I TTCGAA 1 cut(s) 277
BspTI CTTAAG 1 cut(s) 1202
BsrGI TGTACA 1 cut(s) 1322
BsrI ACTGG 3 cut(s) 211, 462, 1052
BssMI GATC 7 cut(s) 322, 415, 463, 766, 889, 1076, 1312
Bst2UI CCWGG 1 cut(s) 894
Bst4CI ACNGT 3 cut(s) 115, 916, 1277
Bst6I CTCTTC 3 cut(s) 156, 671, 1326
BstAFI CTTAAG 1 cut(s) 1202
BstAPI GCANNNNNTGC 1 cut(s) 1264
BstAUI TGTACA 1 cut(s) 1322
BstBI TTCGAA 1 cut(s) 277
BstC8I GCNNGC 2 cut(s) 924, 996
BstDEI CTNAG 3 cut(s) 161, 478, 1102
BstF5I GGATG 2 cut(s) 61, 784
BstHHI GCGC 2 cut(s) 699, 1258
BstKTI GATC 7 cut(s) 325, 418, 466, 769, 892, 1079, 1315
BstMAI GTCTC 3 cut(s) 207, 530, 957
BstMBI GATC 7 cut(s) 322, 415, 463, 766, 889, 1076, 1312
BstMWI GCNNNNNNNGC 2 cut(s) 908, 1264
BstNI CCWGG 1 cut(s) 894
BstNSI RCATGY 1 cut(s) 671
BstSCI CCNGG 1 cut(s) 892
BstSFI CTRYAG 2 cut(s) 300, 615
BstSLI GKGCMC 2 cut(s) 250, 452
BstV1I GCAGC 1 cut(s) 906
BstV2I GAAGAC 1 cut(s) 466
BstX2I RGATCY 5 cut(s) 322, 415, 463, 889, 1076
BstYI RGATCY 5 cut(s) 322, 415, 463, 889, 1076
BtsCI GGATG 2 cut(s) 61, 784
BtsI GCAGTG 2 cut(s) 259, 660
BtsIMutI CAGTG 9 cut(s) 49, 111, 259, 319, 455, 660, 1045, 1282, 1325
Cac8I GCNNGC 2 cut(s) 924, 996
CciI TCATGA 2 cut(s) 637, 1033
CfoI GCGC 2 cut(s) 699, 1258
Cfr13I GGNCC 1 cut(s) 108
CseI GACGC 1 cut(s) 8
Csp6I GTAC 3 cut(s) 599, 727, 1323
CviAII CATG 7 cut(s) 445, 539, 638, 668, 707, 754, 1034
CviQI GTAC 3 cut(s) 599, 727, 1323
DdeI CTNAG 3 cut(s) 161, 478, 1102
DpnI GATC 7 cut(s) 324, 417, 465, 768, 891, 1078, 1314
DpnII GATC 7 cut(s) 322, 415, 463, 766, 889, 1076, 1312
Eam1104I CTCTTC 3 cut(s) 156, 671, 1326
EarI CTCTTC 3 cut(s) 156, 671, 1326
Eco47I GGWCC 1 cut(s) 108
Eco57I CTGAAG 3 cut(s) 295, 420, 1301
EcoRII CCWGG 1 cut(s) 892
EcoT22I ATGCAT 1 cut(s) 673
FaeI CATG 7 cut(s) 448, 542, 641, 671, 710, 757, 1037
FalI AAGNNNNNCTT 2 cut(s) 234, 266
FatI CATG 7 cut(s) 444, 538, 637, 667, 706, 753, 1033
Fnu4HI GCNGC 1 cut(s) 920
FokI GGATG 2 cut(s) 68, 791
Fsp4HI GCNGC 1 cut(s) 920
FspBI CTAG 2 cut(s) 123, 818
GlaI GCGC 2 cut(s) 698, 1257
GluI GCNGC 1 cut(s) 920
GsuI CTGGAG 1 cut(s) 479
HapII CCGG 1 cut(s) 53
HgaI GACGC 1 cut(s) 8
HhaI GCGC 2 cut(s) 699, 1258
Hin1II CATG 7 cut(s) 448, 542, 641, 671, 710, 757, 1037
Hin6I GCGC 2 cut(s) 697, 1256
HinP1I GCGC 2 cut(s) 697, 1256
HinfI GANTC 7 cut(s) 11, 39, 333, 382, 575, 1162, 1224
HpaII CCGG 1 cut(s) 53
HphI GGTGA 1 cut(s) 1322
Hpy166II GTNNAC 5 cut(s) 108, 248, 450, 729, 1323
Hpy188I TCNGA 8 cut(s) 10, 271, 468, 481, 559, 1011, 1076, 1150
Hpy188III TCNNGA 7 cut(s) 330, 586, 638, 802, 842, 956, 1034
Hpy8I GTNNAC 5 cut(s) 108, 248, 450, 729, 1323
HpyAV CCTTC 4 cut(s) 226, 236, 266, 406
HpyCH4III ACNGT 3 cut(s) 115, 916, 1277
HpyCH4V TGCA 7 cut(s) 59, 248, 450, 569, 665, 671, 911
HpyF10VI GCNNNNNNNGC 2 cut(s) 908, 1264
HpyF3I CTNAG 3 cut(s) 161, 478, 1102
Hsp92II CATG 7 cut(s) 448, 542, 641, 671, 710, 757, 1037
HspAI GCGC 2 cut(s) 697, 1256
Kzo9I GATC 7 cut(s) 322, 415, 463, 766, 889, 1076, 1312
LmnI GCTCC 3 cut(s) 502, 751, 872
Lsp1109I GCAGC 1 cut(s) 906
LweI GCATC 3 cut(s) 46, 636, 769
MaeI CTAG 2 cut(s) 123, 818
MaeIII GTNAC 2 cut(s) 68, 701
MalI GATC 7 cut(s) 324, 417, 465, 768, 891, 1078, 1314
MboI GATC 7 cut(s) 322, 415, 463, 766, 889, 1076, 1312
MboII GAAGA 9 cut(s) 77, 143, 413, 466, 617, 688, 1022, 1307, 1343
MflI RGATCY 5 cut(s) 322, 415, 463, 889, 1076
MhlI GDGCHC 3 cut(s) 250, 452, 499
MluCI AATT 7 cut(s) 47, 136, 790, 849, 930, 1016, 1346
MlyI GAGTC 1 cut(s) 20
MmeI TCCRAC 1 cut(s) 524
MnlI CCTC 9 cut(s) 313, 441, 454, 527, 672, 769, 973, 978, 1336
Mph1103I ATGCAT 1 cut(s) 673
MroXI GAANNNNTTC 1 cut(s) 473
MseI TTAA 5 cut(s) 486, 611, 741, 1203, 1396
MslI CAYNNNNRTG 3 cut(s) 312, 1119, 1121
MspCI CTTAAG 1 cut(s) 1202
MspI CCGG 1 cut(s) 53
MspR9I CCNGG 1 cut(s) 894
Mva1269I GAATGC 1 cut(s) 571
MvaI CCWGG 1 cut(s) 894
MwoI GCNNNNNNNGC 2 cut(s) 908, 1264
NdeII GATC 7 cut(s) 322, 415, 463, 766, 889, 1076, 1312
NlaIII CATG 7 cut(s) 448, 542, 641, 671, 710, 757, 1037
NlaIV GGNNCC 3 cut(s) 417, 515, 874
NmuCI GTSAC 1 cut(s) 68
NsiI ATGCAT 1 cut(s) 673
NspI RCATGY 1 cut(s) 671
NspV TTCGAA 1 cut(s) 277
OliI CACNNNNGTG 2 cut(s) 312, 1121
PagI TCATGA 2 cut(s) 637, 1033
PctI GAATGC 1 cut(s) 571
PdmI GAANNNNTTC 1 cut(s) 473
PfeI GAWTC 6 cut(s) 39, 333, 382, 575, 1162, 1224
PkrI GCNGC 1 cut(s) 921
PleI GAGTC 1 cut(s) 19
PpsI GAGTC 1 cut(s) 19
PshBI ATTAAT 1 cut(s) 741
Psp6I CCWGG 1 cut(s) 892
PspGI CCWGG 1 cut(s) 892
PspN4I GGNNCC 3 cut(s) 417, 515, 874
PspPI GGNCC 1 cut(s) 108
PsuI RGATCY 5 cut(s) 322, 415, 463, 889, 1076
RsaI GTAC 3 cut(s) 600, 728, 1324
RsaNI GTAC 3 cut(s) 599, 727, 1323
RseI CAYNNNNRTG 3 cut(s) 312, 1119, 1121
SaqAI TTAA 5 cut(s) 486, 611, 741, 1203, 1396
SatI GCNGC 1 cut(s) 920
Sau3AI GATC 7 cut(s) 322, 415, 463, 766, 889, 1076, 1312
Sau96I GGNCC 1 cut(s) 108
SchI GAGTC 1 cut(s) 20
ScrFI CCNGG 1 cut(s) 894
SduI GDGCHC 3 cut(s) 250, 452, 499
SetI ASST 9 cut(s) 162, 167, 247, 519, 534, 622, 984, 1026, 1312
SfaNI GCATC 3 cut(s) 46, 636, 769
SfcI CTRYAG 2 cut(s) 300, 615
SfuI TTCGAA 1 cut(s) 277
SinI GGWCC 1 cut(s) 108
SmiMI CAYNNNNRTG 3 cut(s) 312, 1119, 1121
SmlI CTYRAG 3 cut(s) 527, 770, 1202
SmoI CTYRAG 3 cut(s) 527, 770, 1202
Sse9I AATT 7 cut(s) 47, 136, 790, 849, 930, 1016, 1346
SspI AATATT 1 cut(s) 713
SspMI CTAG 2 cut(s) 123, 818
StyD4I CCNGG 1 cut(s) 892
TaaI ACNGT 3 cut(s) 115, 916, 1277
TaqI TCGA 5 cut(s) 168, 277, 331, 375, 1156
TasI AATT 7 cut(s) 47, 136, 790, 849, 930, 1016, 1346
TatI WGTACW 1 cut(s) 1322
TfiI GAWTC 6 cut(s) 39, 333, 382, 575, 1162, 1224
Tru1I TTAA 5 cut(s) 486, 611, 741, 1203, 1396
Tru9I TTAA 5 cut(s) 486, 611, 741, 1203, 1396
TscAI CASTG 9 cut(s) 49, 118, 266, 319, 462, 667, 1052, 1282, 1325
TseFI GTSAC 1 cut(s) 68
TseI GCWGC 1 cut(s) 919
Tsp45I GTSAC 1 cut(s) 68
TspDTI ATGAA 6 cut(s) 395, 425, 433, 626, 723, 1022
TspRI CASTG 9 cut(s) 49, 118, 266, 319, 462, 667, 1052, 1282, 1325
Vha464I CTTAAG 1 cut(s) 1202
VneI GTGCAC 2 cut(s) 246, 448
VpaK11BI GGWCC 1 cut(s) 108
VspI ATTAAT 1 cut(s) 741
XapI RAATTY 3 cut(s) 849, 930, 1346
XceI RCATGY 1 cut(s) 671
XcmI CCANNNNNNNNNTGG 1 cut(s) 1021
XmnI GAANNNNTTC 1 cut(s) 473
XspI CTAG 2 cut(s) 123, 818
Zsp2I ATGCAT 1 cut(s) 673
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.