FvH4_3g17581

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000079
Physical Location & Seq
Reverse (-)
11199392 .. 11202257
2866 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g17581.t1

Sequence Viewer

Length: 1452 bp
ATGGATTCGGAGTCTAAGCGTCAAGTACAAGGAGTTGATAGAATTAGTGCATTGCCAGATGCACTTGTTTGCCACATATTGTCATTCATCCCTACAGTATATGCCGTGTGGACCACCCTTTTGTCTAGGAGATGGAACAATTTATGGAGGTCCCTTCCTAATTTGGACTTCAATAACGAAGACTTCCCTACCAAGAGGACTGATGATTTTATGGAATTCGTTGATTGTGTACTTGCCTCTCGTGGCTCAACAGACATCCGAAAACTCTCTCTCCACATCCGCCATTGTGAGAACTTCAGTACTGGGGATTTCTATCGCGTTCATAGGTGGATTTGTGCTGCCACTAGGGAGAACCTTGTTGAACTTGATTTCTGTCTTTTGTTTGAGTCTCGCCAGAATGATGAGTTAGAACTGCCTCTAAGCCTTTTCAAATGCAAAACACTTGAGGTTTTGTCAGTGCAATCAAATTGCATCACCTACCCTGCTGCTACAAAAGGGTGTTTCCCAAGCCTCAAGGTCCTTGATGTATCAGATTTTCGTCCTGATGTTGATTCAATGCAGAAGTTCTTTTCTCATTTCCCTGTGCTCGAAGAGTTGAATATTTATGCATACCCTTGTTTTTACAATGTTTTCAATATCAAAGTCTCTGCACCTGAATTGAAGACACTGAGAATATCGTTGGACTATTTCAGTCACAACTATATGCGTCCCAACAATATTTTTATCAATGCCCCAAAGCTGGAGAACCTTGAAGTCACAGATGGTGTTTTAACAAATTACAGTTTGGAGAGTACAAGATGTCCAGAAAGAACTAAGATTGTATATTCTAACAGACGTCTAAATAATGACTATTGGTTCATTCAAGATAAAGATGATGTATTTGAAGATGAAGCCCCGAGATTCACTATTCGTGCAGCTGCTTTACTTGAAAAAGTTCAGAATGTTAAATGTCTGTCTCTTGAATCTCGTCCTAAATGTTTGGAGGCTTGTTGTGTACCTGCTTTGGAATATTTGGTCAAATTGGAGCTGGCTCTTCTTGACTGCTACAACTGGGAGTTGCTAACAGAATTGCTGAAGAGATCGCCTAAGCTGGAATATCTTGGATTAGAACATAAAAAAACCAGCTTTCATGAATCCTTAGAGCGTGAATGGAATCCACCTGAGTCTGTGCCTATTTGTTTGGCATCAAGCCTCAAGACTATCTGCGTAAACGGATTCAAAGGAAGGCGGTATGAGATGGAGGTTGCAAAGTATTTGTTAAACCACGGCGAAGTTCTGAACACCATGACTATTTCAACCAAGGATCAGTTTGGTTGTCAGGATGGTCGTCCTTACAAGACAGAGGAAGAGTTATGCAAGGAATTTCACGCATGTCAAAAGGGTTCAAAGATCTGCCGTGTTAACATAATTTATGATGCAGGATTCTTTTCTTTTGAAAAGTTCAGTTCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

484

Amino Acids

56.12

Weight (kDa)

5.81

Isoelectric Point (pI)

46.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 15 - 54 6.7e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 78 - 441 1.5e-14 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 108 - 261 1.2e-11 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 387 - 431 1.2e-14 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 838
Acc36I ACCTGC 1 cut(s) 1006
AccII CGCG 1 cut(s) 318
AciI CCGC 2 cut(s) 280, 1228
AclWI GGATC 1 cut(s) 1311
AcsI RAATTY 2 cut(s) 215, 1361
AcuI CTGAAG 2 cut(s) 280, 1094
AcyI GRCGYC 1 cut(s) 835
AfaI GTAC 5 cut(s) 27, 231, 301, 793, 996
AfiI CCNNNNNNNGG 1 cut(s) 739
AluBI AGCT 5 cut(s) 739, 917, 1027, 1090, 1125
AluI AGCT 5 cut(s) 739, 917, 1027, 1090, 1125
Alw21I GWGCWC 1 cut(s) 588
Alw26I GTCTC 3 cut(s) 393, 649, 960
AlwI GGATC 1 cut(s) 1311
Ama87I CYCGRG 1 cut(s) 895
ApeKI GCWGC 4 cut(s) 338, 485, 914, 917
ApoI RAATTY 2 cut(s) 215, 1361
ArsI GACNNNNNNTTYG 2 cut(s) 103, 135
Asp700I GAANNNNTTC 1 cut(s) 933
AspS9I GGNCC 3 cut(s) 111, 150, 517
AsuHPI GGTGA 1 cut(s) 466
AvaI CYCGRG 1 cut(s) 895
AvaII GGWCC 3 cut(s) 111, 150, 517
BauI CACGAG 1 cut(s) 240
BbsI GAAGAC 2 cut(s) 186, 668
Bbv12I GWGCWC 1 cut(s) 588
BbvI GCAGC 4 cut(s) 325, 472, 904, 926
BccI CCATC 4 cut(s) 126, 755, 1231, 1316
BceAI ACGGC 3 cut(s) 89, 1282, 1380
BcoDI GTCTC 3 cut(s) 393, 649, 960
BfaI CTAG 2 cut(s) 126, 345
BfmI CTRYAG 1 cut(s) 93
BfuAI ACCTGC 1 cut(s) 1006
BglII AGATCT 1 cut(s) 1389
BisI GCNGC 4 cut(s) 339, 486, 915, 918
BlsI GCNGC 4 cut(s) 340, 487, 916, 919
BmcAI AGTACT 1 cut(s) 301
Bme18I GGWCC 3 cut(s) 111, 150, 517
BmeT110I CYCGRG 1 cut(s) 895
BmgT120I GGNCC 3 cut(s) 111, 150, 517
BmiI GGNNCC 1 cut(s) 152
BmrI ACTGGG 2 cut(s) 312, 1060
BmsI GCATC 4 cut(s) 49, 480, 1193, 1405
BmuI ACTGGG 2 cut(s) 312, 1060
BpiI GAAGAC 2 cut(s) 186, 668
BpmI CTGGAG 1 cut(s) 761
Bpu10I CCTNAGC 1 cut(s) 1086
BpuEI CTTGAG 3 cut(s) 464, 497, 1178
BsaBI GATNNNNATC 1 cut(s) 312
BsaHI GRCGYC 1 cut(s) 835
BsaJI CCNNGG 2 cut(s) 1264, 1299
BsaXI ACNNNNNCTCC 2 cut(s) 255, 285
Bsc4I CCNNNNNNNGG 1 cut(s) 739
Bse1I ACTGG 2 cut(s) 307, 1055
Bse3DI GCAATG 1 cut(s) 50
Bse8I GATNNNNATC 1 cut(s) 312
BseDI CCNNGG 2 cut(s) 1264, 1299
BseGI GGATG 4 cut(s) 87, 255, 276, 1327
BseJI GATNNNNATC 1 cut(s) 312
BseLI CCNNNNNNNGG 1 cut(s) 739
BseMI GCAATG 1 cut(s) 50
BseMII CTCAG 2 cut(s) 659, 1152
BseNI ACTGG 2 cut(s) 307, 1055
BseXI GCAGC 4 cut(s) 325, 472, 904, 926
BsgI GTGCAG 2 cut(s) 633, 933
Bsh1236I CGCG 1 cut(s) 318
BsiHKAI GWGCWC 1 cut(s) 588
BsiHKCI CYCGRG 1 cut(s) 895
BslFI GGGAC 2 cut(s) 136, 693
BslI CCNNNNNNNGG 1 cut(s) 739
BsmAI GTCTC 3 cut(s) 393, 649, 960
BsmFI GGGAC 2 cut(s) 136, 693
BsoBI CYCGRG 1 cut(s) 895
Bsp1286I GDGCHC 1 cut(s) 588
Bsp143I GATC 3 cut(s) 1079, 1303, 1389
BspACI CCGC 2 cut(s) 280, 1228
BspCNI CTCAG 2 cut(s) 660, 1153
BspFNI CGCG 1 cut(s) 318
BspHI TCATGA 1 cut(s) 1129
BspLI GGNNCC 1 cut(s) 152
BspMI ACCTGC 1 cut(s) 1006
BspPI GGATC 1 cut(s) 1311
BspQI GCTCTTC 1 cut(s) 1038
BsrDI GCAATG 1 cut(s) 50
BsrI ACTGG 2 cut(s) 307, 1055
BssECI CCNNGG 2 cut(s) 1264, 1299
BssMI GATC 3 cut(s) 1079, 1303, 1389
BssNI GRCGYC 1 cut(s) 835
BssSI CACGAG 1 cut(s) 240
BssT1I CCWWGG 1 cut(s) 1299
Bst2BI CACGAG 1 cut(s) 240
Bst4CI ACNGT 2 cut(s) 97, 782
Bst6I CTCTTC 4 cut(s) 585, 1038, 1070, 1341
BstACI GRCGYC 1 cut(s) 835
BstC8I GCNNGC 1 cut(s) 1029
BstDEI CTNAG 8 cut(s) 15, 419, 668, 813, 1086, 1138, 1161, 1449
BstDSI CCRYGG 1 cut(s) 1264
BstF5I GGATG 4 cut(s) 87, 255, 276, 1327
BstFNI CGCG 1 cut(s) 318
BstKTI GATC 3 cut(s) 1082, 1306, 1392
BstMAI GTCTC 3 cut(s) 393, 649, 960
BstMBI GATC 3 cut(s) 1079, 1303, 1389
BstNSI RCATGY 1 cut(s) 1374
BstSFI CTRYAG 1 cut(s) 93
BstUI CGCG 1 cut(s) 318
BstV1I GCAGC 4 cut(s) 325, 472, 904, 926
BstV2I GAAGAC 2 cut(s) 186, 668
BstX2I RGATCY 1 cut(s) 1389
BstYI RGATCY 1 cut(s) 1389
BtgI CCRYGG 1 cut(s) 1264
BtsCI GGATG 4 cut(s) 87, 255, 276, 1327
BtsIMutI CAGTG 2 cut(s) 462, 665
BveI ACCTGC 1 cut(s) 1006
Cac8I GCNNGC 1 cut(s) 1029
CciI TCATGA 1 cut(s) 1129
Cfr13I GGNCC 3 cut(s) 111, 150, 517
CseI GACGC 2 cut(s) 8, 695
Csp6I GTAC 5 cut(s) 26, 230, 300, 792, 995
CviAII CATG 3 cut(s) 1130, 1285, 1371
CviQI GTAC 5 cut(s) 26, 230, 300, 792, 995
DdeI CTNAG 8 cut(s) 15, 419, 668, 813, 1086, 1138, 1161, 1449
DpnI GATC 3 cut(s) 1081, 1305, 1391
DpnII GATC 3 cut(s) 1079, 1303, 1389
Eam1104I CTCTTC 4 cut(s) 585, 1038, 1070, 1341
EarI CTCTTC 4 cut(s) 585, 1038, 1070, 1341
EciI GGCGGA 1 cut(s) 269
Eco130I CCWWGG 1 cut(s) 1299
Eco47I GGWCC 3 cut(s) 111, 150, 517
Eco57I CTGAAG 2 cut(s) 280, 1094
Eco88I CYCGRG 1 cut(s) 895
EcoO109I RGGNCCY 2 cut(s) 150, 517
EcoRI GAATTC 1 cut(s) 215
EcoT14I CCWWGG 1 cut(s) 1299
EcoT22I ATGCAT 1 cut(s) 610
ErhI CCWWGG 1 cut(s) 1299
FaeI CATG 3 cut(s) 1133, 1288, 1374
FaqI GGGAC 2 cut(s) 136, 693
FatI CATG 3 cut(s) 1129, 1284, 1370
Fnu4HI GCNGC 4 cut(s) 339, 486, 915, 918
FokI GGATG 4 cut(s) 74, 242, 263, 1334
Fsp4HI GCNGC 4 cut(s) 339, 486, 915, 918
FspBI CTAG 2 cut(s) 126, 345
GluI GCNGC 4 cut(s) 339, 486, 915, 918
GsuI CTGGAG 1 cut(s) 761
HgaI GACGC 2 cut(s) 8, 695
Hin1I GRCGYC 1 cut(s) 835
Hin1II CATG 3 cut(s) 1133, 1288, 1374
HincII GTYRAC 1 cut(s) 1402
HindII GTYRAC 1 cut(s) 1402
HpaI GTTAAC 1 cut(s) 1402
HphI GGTGA 1 cut(s) 466
Hpy166II GTNNAC 5 cut(s) 111, 230, 995, 1210, 1402
Hpy188I TCNGA 5 cut(s) 10, 260, 532, 939, 1278
Hpy188III TCNNGA 8 cut(s) 542, 803, 863, 959, 1037, 1130, 1195, 1319
Hpy8I GTNNAC 5 cut(s) 111, 230, 995, 1210, 1402
HpyAV CCTTC 2 cut(s) 164, 1218
HpyCH4III ACNGT 2 cut(s) 97, 782
HpyCH4IV ACGT 1 cut(s) 835
HpyF3I CTNAG 8 cut(s) 15, 419, 668, 813, 1086, 1138, 1161, 1449
HpySE526I ACGT 1 cut(s) 835
Hsp92I GRCGYC 1 cut(s) 835
Hsp92II CATG 3 cut(s) 1133, 1288, 1374
KspAI GTTAAC 1 cut(s) 1402
Kzo9I GATC 3 cut(s) 1079, 1303, 1389
LguI GCTCTTC 1 cut(s) 1038
LmnI GCTCC 1 cut(s) 1024
Lsp1109I GCAGC 4 cut(s) 325, 472, 904, 926
LweI GCATC 4 cut(s) 49, 480, 1193, 1405
MaeI CTAG 2 cut(s) 126, 345
MaeII ACGT 1 cut(s) 835
MaeIII GTNAC 2 cut(s) 692, 754
MalI GATC 3 cut(s) 1081, 1305, 1391
MboI GATC 3 cut(s) 1079, 1303, 1389
MboII GAAGA 7 cut(s) 191, 602, 673, 896, 1025, 1087, 1358
MflI RGATCY 1 cut(s) 1389
MhlI GDGCHC 1 cut(s) 588
MlyI GAGTC 3 cut(s) 20, 395, 1172
MmeI TCCRAC 1 cut(s) 660
Mph1103I ATGCAT 1 cut(s) 610
MroXI GAANNNNTTC 1 cut(s) 933
MseI TTAA 4 cut(s) 770, 945, 1259, 1401
MspA1I CMGCKG 1 cut(s) 917
MvnI CGCG 1 cut(s) 318
NdeII GATC 3 cut(s) 1079, 1303, 1389
NlaIII CATG 3 cut(s) 1133, 1288, 1374
NlaIV GGNNCC 1 cut(s) 152
NmuCI GTSAC 2 cut(s) 692, 754
NsiI ATGCAT 1 cut(s) 610
NspI RCATGY 1 cut(s) 1374
PagI TCATGA 1 cut(s) 1129
PciSI GCTCTTC 1 cut(s) 1038
PdmI GAANNNNTTC 1 cut(s) 933
PfeI GAWTC 8 cut(s) 5, 551, 900, 962, 1133, 1153, 1215, 1422
PkrI GCNGC 4 cut(s) 340, 487, 916, 919
PleI GAGTC 3 cut(s) 19, 394, 1171
PpsI GAGTC 3 cut(s) 19, 394, 1171
PpuMI RGGWCCY 2 cut(s) 150, 517
Psp5II RGGWCCY 2 cut(s) 150, 517
PspN4I GGNNCC 1 cut(s) 152
PspPI GGNCC 3 cut(s) 111, 150, 517
PspPPI RGGWCCY 2 cut(s) 150, 517
PsuI RGATCY 1 cut(s) 1389
PvuII CAGCTG 1 cut(s) 917
RsaI GTAC 5 cut(s) 27, 231, 301, 793, 996
RsaNI GTAC 5 cut(s) 26, 230, 300, 792, 995
SapI GCTCTTC 1 cut(s) 1038
SaqAI TTAA 4 cut(s) 770, 945, 1259, 1401
SatI GCNGC 4 cut(s) 339, 486, 915, 918
Sau3AI GATC 3 cut(s) 1079, 1303, 1389
Sau96I GGNCC 3 cut(s) 111, 150, 517
ScaI AGTACT 1 cut(s) 301
SchI GAGTC 3 cut(s) 20, 395, 1172
SduI GDGCHC 1 cut(s) 588
SfaNI GCATC 4 cut(s) 49, 480, 1193, 1405
SfcI CTRYAG 1 cut(s) 93
SinI GGWCC 3 cut(s) 111, 150, 517
SmlI CTYRAG 3 cut(s) 443, 512, 1193
SmoI CTYRAG 3 cut(s) 443, 512, 1193
SsiI CCGC 2 cut(s) 280, 1228
SspI AATATT 3 cut(s) 601, 718, 1010
SspMI CTAG 2 cut(s) 126, 345
StyI CCWWGG 1 cut(s) 1299
TaaI ACNGT 2 cut(s) 97, 782
TaiI ACGT 1 cut(s) 838
TaqI TCGA 1 cut(s) 588
TatI WGTACW 4 cut(s) 25, 229, 299, 791
TfiI GAWTC 8 cut(s) 5, 551, 900, 962, 1133, 1153, 1215, 1422
Tru1I TTAA 4 cut(s) 770, 945, 1259, 1401
Tru9I TTAA 4 cut(s) 770, 945, 1259, 1401
TscAI CASTG 2 cut(s) 462, 672
TseFI GTSAC 2 cut(s) 692, 754
TseI GCWGC 4 cut(s) 338, 485, 914, 917
Tsp45I GTSAC 2 cut(s) 692, 754
TspDTI ATGAA 6 cut(s) 76, 311, 847, 903, 1118, 1146
TspGWI ACGGA 1 cut(s) 1227
TspRI CASTG 2 cut(s) 462, 672
VpaK11BI GGWCC 3 cut(s) 111, 150, 517
XapI RAATTY 2 cut(s) 215, 1361
XceI RCATGY 1 cut(s) 1374
XmnI GAANNNNTTC 1 cut(s) 933
XspI CTAG 2 cut(s) 126, 345
ZraI GACGTC 1 cut(s) 836
ZrmI AGTACT 1 cut(s) 301
Zsp2I ATGCAT 1 cut(s) 610
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.