Rmu_sc0005482.1_g000001

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005482.1
OG0000079
Physical Location & Seq
Reverse (-)
791 .. 2555
1765 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005482.1_g000001.1.cds

Sequence Viewer

Length: 1311 bp
atggcaaaccctgaagcaacaatccaatgccaagaattaccagttgaagttcttgatctaatattttccttccttccaacagtagatgatgttagaaccacagttttgtctagaagatggaatacaatgtggaggacacatcaaagtctagactttgacagtgagagggattttcggaagatactgtcgggtgaagctaaatttgttacatttgttaaccgtgtactcttacttcgtgatccatcacagatatacaagttccgcctgaaactttctcgtaaccgttatgtaccagttgttgctgattggattcgcgctgctgttatgcaagatgtggttgtacttgaccttgacatttcatttagatcttgggatagagaatatgagttgcctgagtgtatttttttgtgcaaaacgctaagggatttgaagctgaagttaacaccttgggtggtcactgctgctattccgacatcagactgcttcccgagtctcaagttcctccatgtcactgttcttgatccttatgaggaagaaatgagaaagcttttttcatgctgcccagtacttgagactttaaccatagatggaaccattgacggggacaatgggaatcatgacaattacaatttcaaggtctatgcacctgaactgaagacaatgaggataggtttggaaaatatcttgaagcctgttgacgtccttatatatgccccaaagcttgaaagccttgctctcaagcggcttggtttgactaattgtttcctcgtggagggtacagaatccttagtcagtgccagtattgctttcatggaaccccttgaaatcgaaggaccacttgatctttccacctttgcaggggagcttctgcaacgagtttcaaatgttaaatctctatctctttcggatttgcatctccctgcttttggtaatctgaaccgattgaagctggttttgtgggatctttgttgctggaatgtgctagttcggtttctcaacagtgcacccaatctggaagatgttgtcttagaaaatagaactgaaggtcacaaagaactgtcagagcttcagtgggatccaccaagggatgtgcctatgtatctgtcattcgtaaagactatctccttgaaggggtttaaaggattgccggttgaggtggacatgataaagtacctgttgaagaatggtgatcagttgaatatgatgaagatttacatgtgtgttcaactttcgtgcgacacactgcctgactttatagcattccctagggcaccaacttgccatcttgagtttctgcagatgcaagtttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

436

Amino Acids

50.09

Weight (kDa)

5.23

Isoelectric Point (pI)

37.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 702
AccB1I GGYRCC 1 cut(s) 1270
AccII CGCG 1 cut(s) 315
AciI CCGC 2 cut(s) 262, 742
AclWI GGATC 5 cut(s) 233, 515, 969, 1070, 1083
AcsI RAATTY 1 cut(s) 200
AcuI CTGAAG 5 cut(s) 33, 455, 674, 1052, 1062
AcyI GRCGYC 1 cut(s) 699
AfaI GTAC 6 cut(s) 225, 291, 342, 567, 778, 1172
AfiI CCNNNNNNNGG 5 cut(s) 600, 772, 858, 926, 1131
AflIII ACRYGT 1 cut(s) 1215
AluBI AGCT 7 cut(s) 197, 433, 547, 721, 865, 949, 1066
AluI AGCT 7 cut(s) 197, 433, 547, 721, 865, 949, 1066
Alw21I GWGCWC 1 cut(s) 1006
Alw26I GTCTC 2 cut(s) 497, 566
Alw44I GTGCAC 1 cut(s) 1002
AlwI GGATC 5 cut(s) 233, 515, 969, 1070, 1083
Ama87I CYCGRG 1 cut(s) 487
ApaLI GTGCAC 1 cut(s) 1002
ApeKI GCWGC 3 cut(s) 317, 461, 558
ApoI RAATTY 1 cut(s) 200
AspA2I CCTAGG 1 cut(s) 1265
AspLEI GCGC 1 cut(s) 317
AspS9I GGNCC 1 cut(s) 833
AsuHPI GGTGA 2 cut(s) 203, 1199
AvaI CYCGRG 1 cut(s) 487
AvaII GGWCC 1 cut(s) 833
AvrII CCTAGG 1 cut(s) 1265
BaeGI GKGCMC 2 cut(s) 1006, 1273
BamHI GGATCC 1 cut(s) 1075
BanI GGYRCC 1 cut(s) 1270
BarI GAAGNNNNNNTAC 4 cut(s) 106, 138, 216, 248
BauI CACGAG 1 cut(s) 767
BbsI GAAGAC 1 cut(s) 662
Bbv12I GWGCWC 1 cut(s) 1006
BbvI GCAGC 3 cut(s) 304, 448, 545
BccI CCATC 4 cut(s) 111, 250, 581, 1290
BclI TGATCA 1 cut(s) 1189
BcoDI GTCTC 2 cut(s) 497, 566
BfaI CTAG 4 cut(s) 111, 149, 983, 1266
BfmI CTRYAG 1 cut(s) 1295
BglII AGATCT 1 cut(s) 365
BisI GCNGC 4 cut(s) 318, 462, 559, 743
BlnI CCTAGG 1 cut(s) 1265
BlsI GCNGC 4 cut(s) 319, 463, 560, 744
BmcAI AGTACT 1 cut(s) 567
Bme18I GGWCC 1 cut(s) 833
BmeT110I CYCGRG 1 cut(s) 487
BmgT120I GGNCC 1 cut(s) 833
BmiI GGNNCC 4 cut(s) 592, 816, 1077, 1272
BmrI ACTGGG 1 cut(s) 557
BmsI GCATC 2 cut(s) 922, 1290
BmuI ACTGGG 1 cut(s) 557
BpiI GAAGAC 1 cut(s) 662
Bpu10I CCTNAGC 1 cut(s) 419
BpuEI CTTGAG 4 cut(s) 479, 590, 722, 1307
BsaBI GATNNNNATC 1 cut(s) 912
BsaHI GRCGYC 1 cut(s) 699
BsaJI CCNNGG 3 cut(s) 446, 1082, 1265
Bsc4I CCNNNNNNNGG 5 cut(s) 600, 772, 858, 926, 1131
Bse118I RCCGGY 1 cut(s) 1147
Bse1I ACTGG 4 cut(s) 41, 293, 563, 798
Bse8I GATNNNNATC 1 cut(s) 912
BseDI CCNNGG 3 cut(s) 446, 1082, 1265
BseGI GGATG 1 cut(s) 1093
BseJI GATNNNNATC 1 cut(s) 912
BseLI CCNNNNNNNGG 5 cut(s) 600, 772, 858, 926, 1131
BseMII CTCAG 1 cut(s) 384
BseNI ACTGG 4 cut(s) 41, 293, 563, 798
BseSI GKGCMC 2 cut(s) 1006, 1273
BseXI GCAGC 3 cut(s) 304, 448, 545
Bsh1236I CGCG 1 cut(s) 315
BshNI GGYRCC 1 cut(s) 1270
BsiHKAI GWGCWC 1 cut(s) 1006
BsiHKCI CYCGRG 1 cut(s) 487
BsiSI CCGG 1 cut(s) 1148
BslFI GGGAC 1 cut(s) 617
BslI CCNNNNNNNGG 5 cut(s) 600, 772, 858, 926, 1131
BsmAI GTCTC 2 cut(s) 497, 566
BsmFI GGGAC 1 cut(s) 617
BsmI GAATGC 1 cut(s) 1259
BsoBI CYCGRG 1 cut(s) 487
Bsp1286I GDGCHC 2 cut(s) 1006, 1273
Bsp143I GATC 8 cut(s) 55, 238, 365, 520, 841, 961, 1075, 1189
BspACI CCGC 2 cut(s) 262, 742
BspCNI CTCAG 1 cut(s) 385
BspFNI CGCG 1 cut(s) 315
BspHI TCATGA 1 cut(s) 616
BspLI GGNNCC 4 cut(s) 592, 816, 1077, 1272
BspMAI CTGCAG 1 cut(s) 1299
BspPI GGATC 5 cut(s) 233, 515, 969, 1070, 1083
BspT107I GGYRCC 1 cut(s) 1270
BsrFI RCCGGY 1 cut(s) 1147
BsrI ACTGG 4 cut(s) 41, 293, 563, 798
BssAI RCCGGY 1 cut(s) 1147
BssECI CCNNGG 3 cut(s) 446, 1082, 1265
BssMI GATC 8 cut(s) 55, 238, 365, 520, 841, 961, 1075, 1189
BssNI GRCGYC 1 cut(s) 699
BssSI CACGAG 1 cut(s) 767
BssT1I CCWWGG 3 cut(s) 446, 1082, 1265
Bst2BI CACGAG 1 cut(s) 767
Bst4CI ACNGT 9 cut(s) 82, 103, 161, 186, 221, 284, 514, 1001, 1059
BstACI GRCGYC 1 cut(s) 699
BstDEI CTNAG 4 cut(s) 393, 419, 787, 1027
BstENI CCTNNNNNAGG 1 cut(s) 770
BstF5I GGATG 1 cut(s) 1093
BstFNI CGCG 1 cut(s) 315
BstHHI GCGC 1 cut(s) 317
BstKTI GATC 8 cut(s) 58, 241, 368, 523, 844, 964, 1078, 1192
BstMAI GTCTC 2 cut(s) 497, 566
BstMBI GATC 8 cut(s) 55, 238, 365, 520, 841, 961, 1075, 1189
BstMWI GCNNNNNNNGC 1 cut(s) 803
BstNSI RCATGY 1 cut(s) 1219
BstSFI CTRYAG 1 cut(s) 1295
BstSLI GKGCMC 2 cut(s) 1006, 1273
BstUI CGCG 1 cut(s) 315
BstV1I GCAGC 3 cut(s) 304, 448, 545
BstV2I GAAGAC 1 cut(s) 662
BstX2I RGATCY 3 cut(s) 365, 961, 1075
BstYI RGATCY 3 cut(s) 365, 961, 1075
BtsCI GGATG 1 cut(s) 1093
BtsI GCAGTG 2 cut(s) 456, 1241
BtsIMutI CAGTG 7 cut(s) 166, 456, 510, 799, 1006, 1076, 1241
CciI TCATGA 1 cut(s) 616
CfoI GCGC 1 cut(s) 317
Cfr10I RCCGGY 1 cut(s) 1147
Cfr13I GGNCC 1 cut(s) 833
Csp6I GTAC 6 cut(s) 224, 290, 341, 566, 777, 1171
CviAII CATG 6 cut(s) 506, 555, 617, 811, 1162, 1216
CviQI GTAC 6 cut(s) 224, 290, 341, 566, 777, 1171
DdeI CTNAG 4 cut(s) 393, 419, 787, 1027
DpnI GATC 8 cut(s) 57, 240, 367, 522, 843, 963, 1077, 1191
DpnII GATC 8 cut(s) 55, 238, 365, 520, 841, 961, 1075, 1189
DraI TTTAAA 1 cut(s) 1138
EciI GGCGGA 1 cut(s) 251
Eco130I CCWWGG 3 cut(s) 446, 1082, 1265
Eco47I GGWCC 1 cut(s) 833
Eco57I CTGAAG 5 cut(s) 33, 455, 674, 1052, 1062
Eco88I CYCGRG 1 cut(s) 487
EcoNI CCTNNNNNAGG 1 cut(s) 770
EcoT14I CCWWGG 3 cut(s) 446, 1082, 1265
ErhI CCWWGG 3 cut(s) 446, 1082, 1265
FaeI CATG 6 cut(s) 509, 558, 620, 814, 1165, 1219
FalI AAGNNNNNCTT 2 cut(s) 822, 854
FaqI GGGAC 1 cut(s) 617
FatI CATG 6 cut(s) 505, 554, 616, 810, 1161, 1215
FbaI TGATCA 1 cut(s) 1189
Fnu4HI GCNGC 4 cut(s) 318, 462, 559, 743
FokI GGATG 1 cut(s) 1100
Fsp4HI GCNGC 4 cut(s) 318, 462, 559, 743
FspBI CTAG 4 cut(s) 111, 149, 983, 1266
GlaI GCGC 1 cut(s) 316
GluI GCNGC 4 cut(s) 318, 462, 559, 743
HapII CCGG 1 cut(s) 1148
HhaI GCGC 1 cut(s) 317
Hin1I GRCGYC 1 cut(s) 699
Hin1II CATG 6 cut(s) 509, 558, 620, 814, 1165, 1219
Hin6I GCGC 1 cut(s) 315
HinP1I GCGC 1 cut(s) 315
HincII GTYRAC 3 cut(s) 217, 441, 697
HindII GTYRAC 3 cut(s) 217, 441, 697
HindIII AAGCTT 2 cut(s) 545, 719
HinfI GANTC 4 cut(s) 310, 490, 613, 782
HpaI GTTAAC 2 cut(s) 217, 441
HpaII CCGG 1 cut(s) 1148
HphI GGTGA 2 cut(s) 203, 1199
Hpy166II GTNNAC 6 cut(s) 217, 224, 441, 697, 1004, 1159
Hpy188I TCNGA 6 cut(s) 177, 471, 478, 907, 936, 1063
Hpy8I GTNNAC 6 cut(s) 217, 224, 441, 697, 1004, 1159
HpyAV CCTTC 5 cut(s) 79, 83, 824, 1037, 1123
HpyCH4III ACNGT 9 cut(s) 82, 103, 161, 186, 221, 284, 514, 1001, 1059
HpyCH4IV ACGT 1 cut(s) 699
HpyCH4V TGCA 9 cut(s) 328, 411, 644, 857, 871, 913, 1004, 1297, 1303
HpyF10VI GCNNNNNNNGC 1 cut(s) 803
HpyF3I CTNAG 4 cut(s) 393, 419, 787, 1027
HpySE526I ACGT 1 cut(s) 699
Hsp92I GRCGYC 1 cut(s) 699
Hsp92II CATG 6 cut(s) 509, 558, 620, 814, 1165, 1219
HspAI GCGC 1 cut(s) 315
Ksp22I TGATCA 1 cut(s) 1189
KspAI GTTAAC 2 cut(s) 217, 441
Kzo9I GATC 8 cut(s) 55, 238, 365, 520, 841, 961, 1075, 1189
LmnI GCTCC 1 cut(s) 862
Lsp1109I GCAGC 3 cut(s) 304, 448, 545
LweI GCATC 2 cut(s) 922, 1290
MaeI CTAG 4 cut(s) 111, 149, 983, 1266
MaeII ACGT 1 cut(s) 699
MaeIII GTNAC 5 cut(s) 205, 278, 454, 508, 1046
MalI GATC 8 cut(s) 57, 240, 367, 522, 843, 963, 1077, 1191
MboI GATC 8 cut(s) 55, 238, 365, 520, 841, 961, 1075, 1189
MboII GAAGA 7 cut(s) 126, 190, 545, 667, 1028, 1192, 1219
MflI RGATCY 3 cut(s) 365, 961, 1075
MhlI GDGCHC 2 cut(s) 1006, 1273
MluCI AATT 5 cut(s) 35, 200, 622, 628, 757
MlyI GAGTC 1 cut(s) 499
MmeI TCCRAC 2 cut(s) 101, 494
MnlI CCTC 8 cut(s) 126, 159, 512, 523, 657, 766, 776, 1147
MseI TTAA 5 cut(s) 216, 440, 578, 888, 1137
MspI CCGG 1 cut(s) 1148
Mva1269I GAATGC 1 cut(s) 1259
MvnI CGCG 1 cut(s) 315
MwoI GCNNNNNNNGC 1 cut(s) 803
NdeII GATC 8 cut(s) 55, 238, 365, 520, 841, 961, 1075, 1189
NlaIII CATG 6 cut(s) 509, 558, 620, 814, 1165, 1219
NlaIV GGNNCC 4 cut(s) 592, 816, 1077, 1272
NmuCI GTSAC 3 cut(s) 454, 508, 1046
NspI RCATGY 1 cut(s) 1219
PagI TCATGA 1 cut(s) 616
PciI ACATGT 1 cut(s) 1215
PctI GAATGC 1 cut(s) 1259
PfeI GAWTC 3 cut(s) 310, 613, 782
PkrI GCNGC 4 cut(s) 319, 463, 560, 744
PleI GAGTC 1 cut(s) 498
PpsI GAGTC 1 cut(s) 498
PscI ACATGT 1 cut(s) 1215
PspN4I GGNNCC 4 cut(s) 592, 816, 1077, 1272
PspPI GGNCC 1 cut(s) 833
PstI CTGCAG 1 cut(s) 1299
PsuI RGATCY 3 cut(s) 365, 961, 1075
RsaI GTAC 6 cut(s) 225, 291, 342, 567, 778, 1172
RsaNI GTAC 6 cut(s) 224, 290, 341, 566, 777, 1171
SaqAI TTAA 5 cut(s) 216, 440, 578, 888, 1137
SatI GCNGC 4 cut(s) 318, 462, 559, 743
Sau3AI GATC 8 cut(s) 55, 238, 365, 520, 841, 961, 1075, 1189
Sau96I GGNCC 1 cut(s) 833
ScaI AGTACT 1 cut(s) 567
SchI GAGTC 1 cut(s) 499
SduI GDGCHC 2 cut(s) 1006, 1273
SfaNI GCATC 2 cut(s) 922, 1290
SfcI CTRYAG 1 cut(s) 1295
SinI GGWCC 1 cut(s) 833
SmlI CTYRAG 4 cut(s) 494, 569, 737, 1286
SmoI CTYRAG 4 cut(s) 494, 569, 737, 1286
Sse9I AATT 5 cut(s) 35, 200, 622, 628, 757
SsiI CCGC 2 cut(s) 262, 742
SspI AATATT 1 cut(s) 63
SspMI CTAG 4 cut(s) 111, 149, 983, 1266
StyI CCWWGG 3 cut(s) 446, 1082, 1265
TaaI ACNGT 9 cut(s) 82, 103, 161, 186, 221, 284, 514, 1001, 1059
TaiI ACGT 1 cut(s) 702
TaqI TCGA 1 cut(s) 828
TasI AATT 5 cut(s) 35, 200, 622, 628, 757
TatI WGTACW 3 cut(s) 223, 340, 565
TauI GCSGC 1 cut(s) 745
TfiI GAWTC 3 cut(s) 310, 613, 782
Tru1I TTAA 5 cut(s) 216, 440, 578, 888, 1137
Tru9I TTAA 5 cut(s) 216, 440, 578, 888, 1137
TscAI CASTG 7 cut(s) 166, 463, 517, 799, 1006, 1076, 1248
TseFI GTSAC 3 cut(s) 454, 508, 1046
TseI GCWGC 3 cut(s) 317, 461, 558
Tsp45I GTSAC 3 cut(s) 454, 508, 1046
TspDTI ATGAA 4 cut(s) 348, 543, 799, 1220
TspRI CASTG 7 cut(s) 166, 463, 517, 799, 1006, 1076, 1248
VneI GTGCAC 1 cut(s) 1002
VpaK11BI GGWCC 1 cut(s) 833
XagI CCTNNNNNAGG 1 cut(s) 770
XapI RAATTY 1 cut(s) 200
XbaI TCTAGA 2 cut(s) 110, 148
XceI RCATGY 1 cut(s) 1219
XmaJI CCTAGG 1 cut(s) 1265
XspI CTAG 4 cut(s) 111, 149, 983, 1266
ZraI GACGTC 1 cut(s) 700
ZrmI AGTACT 1 cut(s) 567
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.