LRR-repeat protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| F-box | PF00646 | 16 - 55 | 7.7e-09 | F-box domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 259, 366 |
| AclI | AACGTT | 1 cut(s) | 333 |
| AclWI | GGATC | 4 cut(s) | 53, 317, 387, 551 |
| AcsI | RAATTY | 2 cut(s) | 163, 254 |
| AcuI | CTGAAG | 1 cut(s) | 461 |
| AfaI | GTAC | 2 cut(s) | 222, 271 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 135 |
| AflIII | ACRYGT | 1 cut(s) | 508 |
| AgsI | TTSAA | 3 cut(s) | 266, 341, 436 |
| AluBI | AGCT | 4 cut(s) | 439, 445, 452, 553 |
| AluI | AGCT | 4 cut(s) | 439, 445, 452, 553 |
| Alw26I | GTCTC | 1 cut(s) | 500 |
| AlwI | GGATC | 4 cut(s) | 53, 317, 387, 551 |
| ApoI | RAATTY | 2 cut(s) | 163, 254 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 287 |
| AspLEI | GCGC | 1 cut(s) | 472 |
| AsuII | TTCGAA | 1 cut(s) | 8 |
| BccI | CCATC | 1 cut(s) | 129 |
| BcoDI | GTCTC | 1 cut(s) | 500 |
| BfaI | CTAG | 2 cut(s) | 399, 492 |
| BfmI | CTRYAG | 1 cut(s) | 201 |
| BmcAI | AGTACT | 1 cut(s) | 222 |
| BmsI | GCATC | 1 cut(s) | 94 |
| Bpu14I | TTCGAA | 1 cut(s) | 8 |
| BpuEI | CTTGAG | 1 cut(s) | 482 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 135 |
| Bse1I | ACTGG | 1 cut(s) | 117 |
| Bse3DI | GCAATG | 3 cut(s) | 315, 459, 465 |
| BseGI | GGATG | 1 cut(s) | 67 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 135 |
| BseMI | GCAATG | 3 cut(s) | 315, 459, 465 |
| BseNI | ACTGG | 1 cut(s) | 117 |
| BseYI | CCCAGC | 1 cut(s) | 445 |
| Bsh1285I | CGRYCG | 1 cut(s) | 523 |
| BsiEI | CGRYCG | 1 cut(s) | 523 |
| BsiSI | CCGG | 1 cut(s) | 59 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 135 |
| BsmAI | GTCTC | 1 cut(s) | 500 |
| BsmI | GAATGC | 1 cut(s) | 148 |
| Bsp119I | TTCGAA | 1 cut(s) | 8 |
| Bsp1407I | TGTACA | 1 cut(s) | 269 |
| Bsp143I | GATC | 7 cut(s) | 45, 301, 309, 352, 379, 520, 543 |
| BspACI | CCGC | 2 cut(s) | 259, 366 |
| BspMAI | CTGCAG | 1 cut(s) | 205 |
| BspPI | GGATC | 4 cut(s) | 53, 317, 387, 551 |
| BspT104I | TTCGAA | 1 cut(s) | 8 |
| BsrDI | GCAATG | 3 cut(s) | 315, 459, 465 |
| BsrGI | TGTACA | 1 cut(s) | 269 |
| BsrI | ACTGG | 1 cut(s) | 117 |
| BssMI | GATC | 7 cut(s) | 45, 301, 309, 352, 379, 520, 543 |
| BstAUI | TGTACA | 1 cut(s) | 269 |
| BstBI | TTCGAA | 1 cut(s) | 8 |
| BstC8I | GCNNGC | 2 cut(s) | 21, 368 |
| BstF5I | GGATG | 1 cut(s) | 67 |
| BstHHI | GCGC | 1 cut(s) | 472 |
| BstKTI | GATC | 7 cut(s) | 48, 304, 312, 355, 382, 523, 546 |
| BstMAI | GTCTC | 1 cut(s) | 500 |
| BstMBI | GATC | 7 cut(s) | 45, 301, 309, 352, 379, 520, 543 |
| BstMCI | CGRYCG | 1 cut(s) | 523 |
| BstNSI | RCATGY | 2 cut(s) | 389, 512 |
| BstSFI | CTRYAG | 1 cut(s) | 201 |
| BstX2I | RGATCY | 1 cut(s) | 379 |
| BstYI | RGATCY | 1 cut(s) | 379 |
| BtsCI | GGATG | 1 cut(s) | 67 |
| BtsIMutI | CAGTG | 2 cut(s) | 55, 124 |
| Cac8I | GCNNGC | 2 cut(s) | 21, 368 |
| CfoI | GCGC | 1 cut(s) | 472 |
| Csp6I | GTAC | 2 cut(s) | 221, 270 |
| CviAII | CATG | 4 cut(s) | 35, 91, 386, 509 |
| CviJI | RGCY | 6 cut(s) | 151, 237, 439, 445, 452, 553 |
| CviKI_1 | RGCY | 6 cut(s) | 151, 237, 439, 445, 452, 553 |
| CviQI | GTAC | 2 cut(s) | 221, 270 |
| DpnI | GATC | 7 cut(s) | 47, 303, 311, 354, 381, 522, 545 |
| DpnII | GATC | 7 cut(s) | 45, 301, 309, 352, 379, 520, 543 |
| EciI | GGCGGA | 1 cut(s) | 248 |
| Eco57I | CTGAAG | 1 cut(s) | 461 |
| FaeI | CATG | 4 cut(s) | 38, 94, 389, 512 |
| FaiI | YATR | 8 cut(s) | 36, 80, 92, 132, 181, 252, 387, 510 |
| FatI | CATG | 4 cut(s) | 34, 90, 385, 508 |
| FauI | CCCGC | 1 cut(s) | 359 |
| FokI | GGATG | 1 cut(s) | 74 |
| FspBI | CTAG | 2 cut(s) | 399, 492 |
| GlaI | GCGC | 1 cut(s) | 471 |
| GsaI | CCCAGC | 1 cut(s) | 449 |
| HapII | CCGG | 1 cut(s) | 59 |
| HhaI | GCGC | 1 cut(s) | 472 |
| Hin1II | CATG | 4 cut(s) | 38, 94, 389, 512 |
| Hin6I | GCGC | 1 cut(s) | 470 |
| HinP1I | GCGC | 1 cut(s) | 470 |
| HinfI | GANTC | 1 cut(s) | 374 |
| HpaII | CCGG | 1 cut(s) | 59 |
| Hpy188I | TCNGA | 2 cut(s) | 361, 379 |
| Hpy188III | TCNNGA | 2 cut(s) | 433, 547 |
| HpyCH4IV | ACGT | 1 cut(s) | 333 |
| HpyCH4V | TGCA | 3 cut(s) | 203, 385, 417 |
| HpySE526I | ACGT | 1 cut(s) | 333 |
| Hsp92II | CATG | 4 cut(s) | 38, 94, 389, 512 |
| HspAI | GCGC | 1 cut(s) | 470 |
| Kzo9I | GATC | 7 cut(s) | 45, 301, 309, 352, 379, 520, 543 |
| LmnI | GCTCC | 1 cut(s) | 449 |
| LpnPI | CCDG | 4 cut(s) | 72, 130, 189, 431 |
| LweI | GCATC | 1 cut(s) | 94 |
| MaeI | CTAG | 2 cut(s) | 399, 492 |
| MaeII | ACGT | 1 cut(s) | 333 |
| MaeIII | GTNAC | 5 cut(s) | 74, 329, 371, 393, 511 |
| MalI | GATC | 7 cut(s) | 47, 303, 311, 354, 381, 522, 545 |
| MboI | GATC | 7 cut(s) | 45, 301, 309, 352, 379, 520, 543 |
| MboII | GAAGA | 3 cut(s) | 50, 151, 527 |
| MflI | RGATCY | 1 cut(s) | 379 |
| MluCI | AATT | 6 cut(s) | 66, 163, 254, 283, 454, 481 |
| MlyI | GAGTC | 1 cut(s) | 368 |
| MnlI | CCTC | 2 cut(s) | 487, 537 |
| MroXI | GAANNNNTTC | 1 cut(s) | 287 |
| MseI | TTAA | 1 cut(s) | 279 |
| MspI | CCGG | 1 cut(s) | 59 |
| Mva1269I | GAATGC | 1 cut(s) | 148 |
| NdeII | GATC | 7 cut(s) | 45, 301, 309, 352, 379, 520, 543 |
| NlaIII | CATG | 4 cut(s) | 38, 94, 389, 512 |
| NmuCI | GTSAC | 3 cut(s) | 74, 371, 511 |
| NspI | RCATGY | 2 cut(s) | 389, 512 |
| NspV | TTCGAA | 1 cut(s) | 8 |
| PciI | ACATGT | 1 cut(s) | 508 |
| PctI | GAATGC | 1 cut(s) | 148 |
| PdmI | GAANNNNTTC | 1 cut(s) | 287 |
| Ple19I | CGATCG | 1 cut(s) | 523 |
| PleI | GAGTC | 1 cut(s) | 368 |
| PpsI | GAGTC | 1 cut(s) | 368 |
| PscI | ACATGT | 1 cut(s) | 508 |
| Psp1406I | AACGTT | 1 cut(s) | 333 |
| PspFI | CCCAGC | 1 cut(s) | 445 |
| PstI | CTGCAG | 1 cut(s) | 205 |
| PsuI | RGATCY | 1 cut(s) | 379 |
| PvuI | CGATCG | 1 cut(s) | 523 |
| RsaI | GTAC | 2 cut(s) | 222, 271 |
| RsaNI | GTAC | 2 cut(s) | 221, 270 |
| SaqAI | TTAA | 1 cut(s) | 279 |
| Sau3AI | GATC | 7 cut(s) | 45, 301, 309, 352, 379, 520, 543 |
| ScaI | AGTACT | 1 cut(s) | 222 |
| SchI | GAGTC | 1 cut(s) | 368 |
| SfaNI | GCATC | 1 cut(s) | 94 |
| SfcI | CTRYAG | 1 cut(s) | 201 |
| SfuI | TTCGAA | 1 cut(s) | 8 |
| SmlI | CTYRAG | 1 cut(s) | 497 |
| SmoI | CTYRAG | 1 cut(s) | 497 |
| Sse9I | AATT | 6 cut(s) | 66, 163, 254, 283, 454, 481 |
| SsiI | CCGC | 2 cut(s) | 259, 366 |
| SspI | AATATT | 1 cut(s) | 247 |
| SspMI | CTAG | 2 cut(s) | 399, 492 |
| TaiI | ACGT | 1 cut(s) | 336 |
| TaqI | TCGA | 4 cut(s) | 8, 519, 529, 546 |
| TasI | AATT | 6 cut(s) | 66, 163, 254, 283, 454, 481 |
| TatI | WGTACW | 2 cut(s) | 220, 269 |
| Tru1I | TTAA | 1 cut(s) | 279 |
| Tru9I | TTAA | 1 cut(s) | 279 |
| TscAI | CASTG | 2 cut(s) | 55, 124 |
| TseFI | GTSAC | 3 cut(s) | 74, 371, 511 |
| Tsp45I | GTSAC | 3 cut(s) | 74, 371, 511 |
| TspDTI | ATGAA | 5 cut(s) | 51, 79, 174, 239, 448 |
| TspRI | CASTG | 2 cut(s) | 55, 124 |
| XapI | RAATTY | 2 cut(s) | 163, 254 |
| XceI | RCATGY | 2 cut(s) | 389, 512 |
| XmnI | GAANNNNTTC | 1 cut(s) | 287 |
| XspI | CTAG | 2 cut(s) | 399, 492 |
| ZrmI | AGTACT | 1 cut(s) | 222 |