Rmu_sc0007143.1_g000008

F-box LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007143.1
OG0000079
Physical Location & Seq
Forward (+)
21818 .. 26961
5144 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007143.1_g000008.1.cds

Sequence Viewer

Length: 1506 bp
atgatttctggagagctaaaaggccaaaagtcggctaagctttgtctttgtggcccagcccagaagggtcatggggacttgacgtcttccccacgttcgtaccaagtctcagagccaacgatggttgaaccattttcttttacagggccgccgtcgatcatatggattgcgcgttatgaccctacgcttcccagaccatggaagggtttgattgatccttccacaggttggctatatttctggaaccctgaaaccaacgttacccaatatgaaagaccatccgcccctctatatcatcatcaatttcagctgcagcaatatccatatccatggcttcctcgttacgaccggccacaactccagtactctcaccagtacccagaacctctctctacatctcatggccccatatgcgcctcaccatctattccgattgcggttcgagctccacacccggttaccgttccgatcaactacccacgatatggatccctgattggtgagaaaggtgaagatagagataggattagtgagttaccggatgaccttatttgtcacatactttcttttcttccaacaataactgccgtaaggacaactgttttgtctaaaagatggaacaagttgtggacttttgttcgccatctagacttcgacttatatagagatcggcccgatgagaataagtacctttttgagagatttgttgaatttgtatttctccgtcttgtttcactggacattggaaaatttcgtcttagatatgcctctgccagctgggaagatgatttttctcatgttgatgattgggtttctgttgccgtctggcgcaatgttgttgaacttgatcttagaagttttgatggtctttgtcgcctacctaaaagtattttctggtgcaaaaccctcaaggttttgaaactgtggatagattatataaatattcctgatcctcctacaaaagggagtttcccaaatctcaaaatcttgcatgtcacagttacaaatcctgatgacgaactgggaaaacttctttcttacttccctgtggtcgaagatttgagcatacacggacagttgacgtactcttacatttactatcacaatatcaatctcaaagtctcttttccagaactgaagacgttgaaattaagtacggaacgtgaggaaatgacagactacgaaatgggacatgattatggtggaaccctaaatcagtaccatttttgtgtcgatgccccaaagcttgaaaaccttgatcttgtacagattcctttgtcaaattatattttagagaacccaaaatccgtagtcaatgccatagggcgttggaatttctgctcctatgaagccggccacgatctcgtcttccacccgggttctattccagcccccaacttcaactccttcaagtcagattgtgtcttcaaatccatctccaattcgacctcgcaggagatcaacgtcaagctcatgttctgctctatttgggataagacgaactga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

501

Amino Acids

57.92

Weight (kDa)

6.25

Isoelectric Point (pI)

34.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 86
AccB7I CCANNNNNTGG 3 cut(s) 198, 228, 485
AccII CGCG 1 cut(s) 172
AciI CCGC 3 cut(s) 149, 282, 437
AclI AACGTT 1 cut(s) 258
AclWI GGATC 4 cut(s) 209, 483, 496, 944
AcoI YGGCCR 2 cut(s) 350, 1354
AcsI RAATTY 3 cut(s) 710, 749, 1333
AcuI CTGAAG 1 cut(s) 1157
AcyI GRCGYC 1 cut(s) 83
AfaI GTAC 8 cut(s) 101, 365, 377, 689, 1085, 1156, 1220, 1266
AfiI CCNNNNNNNGG 7 cut(s) 31, 198, 203, 224, 228, 485, 962
AgsI TTSAA 9 cut(s) 128, 710, 842, 919, 1147, 1250, 1402, 1411, 1429
AhdI GACNNNNNGTC 1 cut(s) 82
AloI GAACNNNNNNTCC 2 cut(s) 1289, 1321
AluBI AGCT 7 cut(s) 16, 40, 310, 446, 777, 1246, 1471
AluI AGCT 7 cut(s) 16, 40, 310, 446, 777, 1246, 1471
Alw21I GWGCWC 1 cut(s) 448
Alw26I GTCTC 2 cut(s) 112, 1126
AlwI GGATC 4 cut(s) 209, 483, 496, 944
Ama87I CYCGRG 1 cut(s) 1375
AoxI GGCC 7 cut(s) 22, 52, 146, 350, 403, 671, 1354
ApeKI GCWGC 2 cut(s) 310, 313
ApoI RAATTY 3 cut(s) 710, 749, 1333
ArsI GACNNNNNNTTYG 2 cut(s) 586, 618
AspLEI GCGC 3 cut(s) 172, 416, 831
AspS9I GGNCC 4 cut(s) 53, 146, 404, 672
AsuC2I CCSGG 3 cut(s) 455, 1376, 1377
AsuHPI GGTGA 4 cut(s) 362, 411, 512, 521
AvaI CYCGRG 1 cut(s) 1375
BaeI ACNNNNGTAYC 2 cut(s) 83, 116
BamHI GGATCC 1 cut(s) 488
BanII GRGCYC 1 cut(s) 448
BbsI GAAGAC 4 cut(s) 78, 1145, 1360, 1417
Bbv12I GWGCWC 1 cut(s) 448
BbvI GCAGC 2 cut(s) 297, 325
BccI CCATC 7 cut(s) 115, 286, 430, 609, 651, 857, 1442
BceAI ACGGC 3 cut(s) 136, 572, 806
BcnI CCSGG 3 cut(s) 455, 1376, 1377
BcoDI GTCTC 2 cut(s) 112, 1126
BfaI CTAG 1 cut(s) 647
BfmI CTRYAG 1 cut(s) 311
BisI GCNGC 3 cut(s) 149, 311, 314
BlpI GCTNAGC 1 cut(s) 36
BlsI GCNGC 3 cut(s) 150, 312, 315
BmcAI AGTACT 1 cut(s) 365
Bme1390I CCNGG 3 cut(s) 455, 1376, 1377
BmeRI GACNNNNNGTC 1 cut(s) 82
BmeT110I CYCGRG 1 cut(s) 1375
BmgT120I GGNCC 4 cut(s) 53, 146, 404, 672
BmiI GGNNCC 4 cut(s) 245, 406, 490, 1207
BmrFI CCNGG 3 cut(s) 455, 1376, 1377
BmrI ACTGGG 1 cut(s) 1031
BmsI GCATC 1 cut(s) 1225
BmuI ACTGGG 1 cut(s) 1031
BpiI GAAGAC 4 cut(s) 78, 1145, 1360, 1417
BpmI CTGGAG 2 cut(s) 30, 344
Bpu1102I GCTNAGC 1 cut(s) 36
BpuEI CTTGAG 1 cut(s) 893
BpuMI CCSGG 3 cut(s) 455, 1376, 1377
BsaBI GATNNNNATC 1 cut(s) 487
BsaHI GRCGYC 1 cut(s) 83
BsaJI CCNNGG 3 cut(s) 197, 329, 1375
BsaWI WCCGGW 1 cut(s) 538
BsaXI ACNNNNNCTCC 2 cut(s) 1388, 1418
Bsc4I CCNNNNNNNGG 7 cut(s) 31, 198, 203, 224, 228, 485, 962
Bse118I RCCGGY 2 cut(s) 348, 1352
Bse1I ACTGG 4 cut(s) 361, 373, 741, 1026
Bse3DI GCAATG 1 cut(s) 838
Bse8I GATNNNNATC 1 cut(s) 487
BseDI CCNNGG 3 cut(s) 197, 329, 1375
BseGI GGATG 2 cut(s) 278, 547
BseJI GATNNNNATC 1 cut(s) 487
BseLI CCNNNNNNNGG 7 cut(s) 31, 198, 203, 224, 228, 485, 962
BseMI GCAATG 1 cut(s) 838
BseMII CTCAG 1 cut(s) 123
BseNI ACTGG 4 cut(s) 361, 373, 741, 1026
BseXI GCAGC 2 cut(s) 297, 325
BseYI CCCAGC 2 cut(s) 55, 777
Bsh1236I CGCG 1 cut(s) 172
Bsh1285I CGRYCG 1 cut(s) 349
BshFI GGCC 7 cut(s) 24, 54, 148, 352, 405, 673, 1356
BsiEI CGRYCG 1 cut(s) 349
BsiHKAI GWGCWC 1 cut(s) 448
BsiHKCI CYCGRG 1 cut(s) 1375
BsiSI CCGG 5 cut(s) 349, 455, 539, 1353, 1376
BslFI GGGAC 2 cut(s) 89, 1203
BslI CCNNNNNNNGG 7 cut(s) 31, 198, 203, 224, 228, 485, 962
BsmAI GTCTC 2 cut(s) 112, 1126
BsmFI GGGAC 2 cut(s) 89, 1203
BsnI GGCC 7 cut(s) 24, 54, 148, 352, 405, 673, 1356
BsoBI CYCGRG 1 cut(s) 1375
Bsp1286I GDGCHC 1 cut(s) 448
Bsp1407I TGTACA 1 cut(s) 1264
Bsp1720I GCTNAGC 1 cut(s) 36
Bsp19I CCATGG 2 cut(s) 197, 329
BspACI CCGC 3 cut(s) 149, 282, 437
BspANI GGCC 7 cut(s) 24, 54, 148, 352, 405, 673, 1356
BspCNI CTCAG 1 cut(s) 122
BspFNI CGCG 1 cut(s) 172
BspLI GGNNCC 4 cut(s) 245, 406, 490, 1207
BspMAI CTGCAG 1 cut(s) 315
BspPI GGATC 4 cut(s) 209, 483, 496, 944
BsrDI GCAATG 1 cut(s) 838
BsrFI RCCGGY 2 cut(s) 348, 1352
BsrGI TGTACA 1 cut(s) 1264
BsrI ACTGG 4 cut(s) 361, 373, 741, 1026
BssAI RCCGGY 2 cut(s) 348, 1352
BssECI CCNNGG 3 cut(s) 197, 329, 1375
BssNI GRCGYC 1 cut(s) 83
BssT1I CCWWGG 2 cut(s) 197, 329
Bst4CI ACNGT 5 cut(s) 463, 601, 924, 1000, 1077
BstACI GRCGYC 1 cut(s) 83
BstAUI TGTACA 1 cut(s) 1264
BstC8I GCNNGC 2 cut(s) 775, 1354
BstDEI CTNAG 4 cut(s) 36, 109, 758, 851
BstDSI CCRYGG 2 cut(s) 197, 329
BstEII GGTNACC 1 cut(s) 457
BstENI CCTNNNNNAGG 2 cut(s) 222, 960
BstF5I GGATG 2 cut(s) 278, 547
BstFNI CGCG 1 cut(s) 172
BstHHI GCGC 3 cut(s) 172, 416, 831
BstMAI GTCTC 2 cut(s) 112, 1126
BstMCI CGRYCG 1 cut(s) 349
BstMWI GCNNNNNNNGC 2 cut(s) 411, 443
BstNSI RCATGY 1 cut(s) 995
BstPI GGTNACC 1 cut(s) 457
BstSCI CCNGG 3 cut(s) 453, 1374, 1375
BstSFI CTRYAG 1 cut(s) 311
BstUI CGCG 1 cut(s) 172
BstV1I GCAGC 2 cut(s) 297, 325
BstV2I GAAGAC 4 cut(s) 78, 1145, 1360, 1417
BstX2I RGATCY 1 cut(s) 488
BstXI CCANNNNNNTGG 1 cut(s) 330
BstYI RGATCY 1 cut(s) 488
BsuRI GGCC 7 cut(s) 24, 54, 148, 352, 405, 673, 1356
BtgI CCRYGG 2 cut(s) 197, 329
BtsCI GGATG 2 cut(s) 278, 547
BtsIMutI CAGTG 1 cut(s) 734
Cac8I GCNNGC 2 cut(s) 775, 1354
CfoI GCGC 3 cut(s) 172, 416, 831
Cfr10I RCCGGY 2 cut(s) 348, 1352
Cfr13I GGNCC 4 cut(s) 53, 146, 404, 672
Cfr9I CCCGGG 1 cut(s) 1375
Csp6I GTAC 8 cut(s) 100, 364, 376, 688, 1084, 1155, 1219, 1265
CviAII CATG 8 cut(s) 71, 198, 330, 401, 797, 992, 1193, 1474
CviQI GTAC 8 cut(s) 100, 364, 376, 688, 1084, 1155, 1219, 1265
DdeI CTNAG 4 cut(s) 36, 109, 758, 851
DriI GACNNNNNGTC 1 cut(s) 82
EaeI YGGCCR 2 cut(s) 350, 1354
Eam1105I GACNNNNNGTC 1 cut(s) 82
EciI GGCGGA 1 cut(s) 271
Ecl136II GAGCTC 1 cut(s) 446
Eco130I CCWWGG 2 cut(s) 197, 329
Eco24I GRGCYC 1 cut(s) 448
Eco53kI GAGCTC 1 cut(s) 446
Eco57I CTGAAG 1 cut(s) 1157
Eco88I CYCGRG 1 cut(s) 1375
Eco91I GGTNACC 1 cut(s) 457
EcoICRI GAGCTC 1 cut(s) 446
EcoNI CCTNNNNNAGG 2 cut(s) 222, 960
EcoO65I GGTNACC 1 cut(s) 457
EcoT14I CCWWGG 2 cut(s) 197, 329
EcoT38I GRGCYC 1 cut(s) 448
ErhI CCWWGG 2 cut(s) 197, 329
FaeI CATG 8 cut(s) 74, 201, 333, 404, 800, 995, 1196, 1477
FaqI GGGAC 2 cut(s) 89, 1203
FatI CATG 8 cut(s) 70, 197, 329, 400, 796, 991, 1192, 1473
FauNDI CATATG 2 cut(s) 161, 410
Fnu4HI GCNGC 3 cut(s) 149, 311, 314
FokI GGATG 2 cut(s) 265, 554
FriOI GRGCYC 1 cut(s) 448
Fsp4HI GCNGC 3 cut(s) 149, 311, 314
FspBI CTAG 1 cut(s) 647
GlaI GCGC 3 cut(s) 171, 415, 830
GluI GCNGC 3 cut(s) 149, 311, 314
GsaI CCCAGC 2 cut(s) 59, 781
GsuI CTGGAG 2 cut(s) 30, 344
HaeIII GGCC 7 cut(s) 24, 54, 148, 352, 405, 673, 1356
HapII CCGG 5 cut(s) 349, 455, 539, 1353, 1376
HhaI GCGC 3 cut(s) 172, 416, 831
Hin1I GRCGYC 1 cut(s) 83
Hin1II CATG 8 cut(s) 74, 201, 333, 404, 800, 995, 1196, 1477
Hin6I GCGC 3 cut(s) 170, 414, 829
HinP1I GCGC 3 cut(s) 170, 414, 829
HincII GTYRAC 1 cut(s) 1080
HindII GTYRAC 1 cut(s) 1080
HindIII AAGCTT 2 cut(s) 38, 1244
HinfI GANTC 1 cut(s) 1270
HpaII CCGG 5 cut(s) 349, 455, 539, 1353, 1376
HphI GGTGA 4 cut(s) 362, 411, 512, 521
Hpy166II GTNNAC 2 cut(s) 630, 1080
Hpy188I TCNGA 4 cut(s) 112, 432, 468, 1417
Hpy188III TCNNGA 6 cut(s) 9, 241, 647, 947, 1010, 1130
Hpy8I GTNNAC 2 cut(s) 630, 1080
Hpy99I CGWCG 1 cut(s) 157
HpyAV CCTTC 4 cut(s) 58, 196, 228, 1417
HpyCH4III ACNGT 5 cut(s) 463, 601, 924, 1000, 1077
HpyCH4IV ACGT 7 cut(s) 83, 94, 258, 1082, 1142, 1162, 1464
HpyCH4V TGCA 3 cut(s) 313, 900, 991
HpyF10VI GCNNNNNNNGC 2 cut(s) 411, 443
HpyF3I CTNAG 4 cut(s) 36, 109, 758, 851
HpySE526I ACGT 7 cut(s) 83, 94, 258, 1082, 1142, 1162, 1464
Hsp92I GRCGYC 1 cut(s) 83
Hsp92II CATG 8 cut(s) 74, 201, 333, 404, 800, 995, 1196, 1477
HspAI GCGC 3 cut(s) 170, 414, 829
KroI GCCGGC 1 cut(s) 1352
KroNI GCCGGC 1 cut(s) 1354
LmnI GCTCC 2 cut(s) 451, 1346
Lsp1109I GCAGC 2 cut(s) 297, 325
LweI GCATC 1 cut(s) 1225
MaeI CTAG 1 cut(s) 647
MaeII ACGT 7 cut(s) 83, 94, 258, 1082, 1142, 1162, 1464
MaeIII GTNAC 7 cut(s) 259, 341, 457, 534, 554, 994, 1000
MboII GAAGA 8 cut(s) 78, 524, 563, 794, 1067, 1150, 1360, 1417
MflI RGATCY 1 cut(s) 488
MhlI GDGCHC 1 cut(s) 448
MluCI AATT 7 cut(s) 302, 710, 749, 1148, 1282, 1333, 1441
MmeI TCCRAC 2 cut(s) 599, 1310
MnlI CCTC 9 cut(s) 297, 348, 396, 427, 778, 917, 963, 1159, 1459
MroNI GCCGGC 1 cut(s) 1352
MseI TTAA 1 cut(s) 1151
MslI CAYNNNNRTG 4 cut(s) 328, 801, 1197, 1227
MspA1I CMGCKG 2 cut(s) 310, 777
MspI CCGG 5 cut(s) 349, 455, 539, 1353, 1376
MspR9I CCNGG 3 cut(s) 455, 1376, 1377
MvnI CGCG 1 cut(s) 172
MwoI GCNNNNNNNGC 2 cut(s) 411, 443
NaeI GCCGGC 1 cut(s) 1354
NciI CCSGG 3 cut(s) 455, 1376, 1377
NcoI CCATGG 2 cut(s) 197, 329
NdeI CATATG 2 cut(s) 161, 410
NgoMIV GCCGGC 1 cut(s) 1352
NlaIII CATG 8 cut(s) 74, 201, 333, 404, 800, 995, 1196, 1477
NlaIV GGNNCC 4 cut(s) 245, 406, 490, 1207
NmuCI GTSAC 2 cut(s) 554, 994
NspI RCATGY 1 cut(s) 995
PdiI GCCGGC 1 cut(s) 1354
PfeI GAWTC 1 cut(s) 1270
PflMI CCANNNNNTGG 3 cut(s) 198, 228, 485
PkrI GCNGC 3 cut(s) 150, 312, 315
Psp124BI GAGCTC 1 cut(s) 448
Psp1406I AACGTT 1 cut(s) 258
PspEI GGTNACC 1 cut(s) 457
PspFI CCCAGC 2 cut(s) 55, 777
PspN4I GGNNCC 4 cut(s) 245, 406, 490, 1207
PspPI GGNCC 4 cut(s) 53, 146, 404, 672
PstI CTGCAG 1 cut(s) 315
PsuI RGATCY 1 cut(s) 488
PvuII CAGCTG 2 cut(s) 310, 777
RsaI GTAC 8 cut(s) 101, 365, 377, 689, 1085, 1156, 1220, 1266
RsaNI GTAC 8 cut(s) 100, 364, 376, 688, 1084, 1155, 1219, 1265
RseI CAYNNNNRTG 4 cut(s) 328, 801, 1197, 1227
SacI GAGCTC 1 cut(s) 448
SaqAI TTAA 1 cut(s) 1151
SatI GCNGC 3 cut(s) 149, 311, 314
Sau96I GGNCC 4 cut(s) 53, 146, 404, 672
ScaI AGTACT 1 cut(s) 365
ScrFI CCNGG 3 cut(s) 455, 1376, 1377
SduI GDGCHC 1 cut(s) 448
SfaNI GCATC 1 cut(s) 1225
SfcI CTRYAG 1 cut(s) 311
SmaI CCCGGG 1 cut(s) 1377
SmiMI CAYNNNNRTG 4 cut(s) 328, 801, 1197, 1227
SmlI CTYRAG 1 cut(s) 908
SmoI CTYRAG 1 cut(s) 908
Sse9I AATT 7 cut(s) 302, 710, 749, 1148, 1282, 1333, 1441
SsiI CCGC 3 cut(s) 149, 282, 437
SspI AATATT 1 cut(s) 943
SspMI CTAG 1 cut(s) 647
SstI GAGCTC 1 cut(s) 448
StyD4I CCNGG 3 cut(s) 453, 1374, 1375
StyI CCWWGG 2 cut(s) 197, 329
TaaI ACNGT 5 cut(s) 463, 601, 924, 1000, 1077
TaiI ACGT 7 cut(s) 86, 97, 261, 1085, 1145, 1165, 1467
TaqI TCGA 6 cut(s) 155, 442, 654, 1053, 1233, 1445
TasI AATT 7 cut(s) 302, 710, 749, 1148, 1282, 1333, 1441
TatI WGTACW 2 cut(s) 363, 1264
TauI GCSGC 1 cut(s) 151
TfiI GAWTC 1 cut(s) 1270
Tru1I TTAA 1 cut(s) 1151
Tru9I TTAA 1 cut(s) 1151
TscAI CASTG 1 cut(s) 741
TseFI GTSAC 2 cut(s) 554, 994
TseI GCWGC 2 cut(s) 310, 313
Tsp45I GTSAC 2 cut(s) 554, 994
TspDTI ATGAA 2 cut(s) 285, 1362
TspGWI ACGGA 4 cut(s) 713, 1086, 1172, 1297
TspMI CCCGGG 1 cut(s) 1375
TspRI CASTG 1 cut(s) 741
Van91I CCANNNNNTGG 3 cut(s) 198, 228, 485
XagI CCTNNNNNAGG 2 cut(s) 222, 960
XapI RAATTY 3 cut(s) 710, 749, 1333
XbaI TCTAGA 1 cut(s) 646
XceI RCATGY 1 cut(s) 995
XcmI CCANNNNNNNNNTGG 1 cut(s) 68
XmaI CCCGGG 1 cut(s) 1375
XspI CTAG 1 cut(s) 647
ZraI GACGTC 1 cut(s) 84
ZrmI AGTACT 1 cut(s) 365
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.