MD11G1265100.v1.1

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000079
Physical Location & Seq
Forward (+)
38046993 .. 38048672
1680 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1265100.v1.1.491

Sequence Viewer

Length: 1392 bp
ATGGGTACCAACTCAAAGTCAAAGCTTCCAAATGCATGCAATGGAGATAGGATCAGTAGTTTACCAAATGAAATTCTTTGCCGCATCCTTTCCCTCCTTCCAACAAAAGAAGCTGTAAAGACCAGTGTTTTATCACCGAGATGGAGGTATGTGTGGACTCCTATTCCCACTCTAGACCTTTGTGATAAGAGCTCGCAAAGAGCATTGAATTCAGTTAGCCCCGGTTTCACTGAGTTTGTGGGTCGTCGCCTCTTCACTCATAGATTCCACCGAGATCGAGGTTTTGCGGAGTTCTTGGATCGTGCACTCAATTATCCTAGTGTTGAAGCTTGGATTTGCACTGCCATTAGGCTTAAGGTTGTTGAACTCGAACTTGTTCTTCATTCTTTAAGCTACCCGTTTGAGTTGCCCGATAACCTTTTCACGTGCAAGACATTGGTGGTTTTGAAGCTTTGGCTGGAATCAAATGTTACCTTTACTCCTACTTCAGGTTGTTTCCCAAATCTGAAGTTCTTCCATGCCAGAATCCGCAATCCTGATGCTGACTCAATGGAGACGCTCTTTTATTCTTGCCCTGCACTCGAAGACTTAATCATAGATGGACTTGTTGCAGTTCGTAAAGTTTTGAATTTTAATATCTCTGCACCTAAACTGAAAAGACTCAAAATATATTTGGTCAAAGACGAACCGTGGGAAGAAACTGGGTCCAATATTTCTTTCGAAGTCAATGCTCCAAATCTTGAAACTTTTGATCTGGAGGAAGACTTTTTTGCAAACTATTACCTCAATGCAAATCAACTGAGCAAAGCAAACATTAATCTCGAAGATGTGCACAAGTCTGGGCACGATGACTATGAACTTGGTTGGGATTATCGTCTGCAGAAGCTTTTTGCCGGAATTATCAATGTGAAATTTCTGTCACTTTCAGCTCCAATTTTTGGGGATCCTGGCTGCTACACTGAAGATAATTTCCCTTTCCCTAAACTGAATCGTTTGAACCACTTGGAGTTACTTCTTGACACTTGCTGCAGTTGGAAAGCTCTCATAGATCTGCTCAATATGTCGCCCCATCTGGAATATCTTGATTTCACAACTAACAAGAGATGTAAGGCGGATCATCCCTTGGAGGACTCGGCACGTGAATGGGTTCCACCTGAGTTTGTGCCTGTTTGCTTGTCGTCATACTTGAAGACTATATCCATACAGGGAATCGAGGGGCGGCCTGATGAGATGGAAGTGACAAAGTACTTGTTGAAGCATGGTGAAGTCCTGGATAAGGTGACATTTTATACGAGTGCCGTTCGTGCAGATCACAAGATGAAGCTGTGTCAAGATATTTCAATGTTCTCAAAGGGTTCGATGACTTGTCAAATTGATTTCCTGGAGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

464

Amino Acids

53.03

Weight (kDa)

5.84

Isoelectric Point (pI)

37.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 18 - 53 4.8e-08 F-box domain
LRR_At1g61320_AtMIF1 PF23622 103 - 443 3.4e-10 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 108 - 256 8.6e-11 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 385 - 429 1.7e-12 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 5
AccB1I GGYRCC 1 cut(s) 5
AccB7I CCANNNNNTGG 1 cut(s) 938
AciI CCGC 5 cut(s) 82, 287, 529, 1112, 1219
AclWI GGATC 5 cut(s) 59, 306, 938, 951, 1122
AcsI RAATTY 4 cut(s) 72, 208, 628, 911
AcuI CTGAAG 3 cut(s) 471, 527, 981
AcvI CACGTG 2 cut(s) 426, 1139
AfaI GTAC 2 cut(s) 7, 1247
AfiI CCNNNNNNNGG 3 cut(s) 488, 938, 1276
AflII CTTAAG 1 cut(s) 353
AjnI CCWGG 3 cut(s) 946, 1269, 1380
AjuI GAANNNNNNNTTGG 2 cut(s) 701, 733
Alw21I GWGCWC 3 cut(s) 194, 307, 834
Alw26I GTCTC 1 cut(s) 548
Alw44I GTGCAC 2 cut(s) 303, 830
AlwI GGATC 5 cut(s) 59, 306, 938, 951, 1122
AoxI GGCC 1 cut(s) 1220
ApaLI GTGCAC 2 cut(s) 303, 830
ApeKI GCWGC 2 cut(s) 951, 1026
ApoI RAATTY 4 cut(s) 72, 208, 628, 911
AseI ATTAAT 1 cut(s) 816
Asp700I GAANNNNTTC 3 cut(s) 375, 512, 1146
Asp718I GGTACC 1 cut(s) 5
AspS9I GGNCC 1 cut(s) 705
AsuC2I CCSGG 1 cut(s) 222
AsuHPI GGTGA 3 cut(s) 126, 1274, 1291
AsuII TTCGAA 1 cut(s) 720
AvaII GGWCC 1 cut(s) 705
BaeGI GKGCMC 3 cut(s) 307, 834, 846
BamHI GGATCC 1 cut(s) 943
BanI GGYRCC 1 cut(s) 5
BanII GRGCYC 1 cut(s) 194
BbrPI CACGTG 2 cut(s) 426, 1139
BbsI GAAGAC 3 cut(s) 591, 768, 1196
Bbv12I GWGCWC 3 cut(s) 194, 307, 834
BbvI GCAGC 2 cut(s) 938, 1013
BccI CCATC 4 cut(s) 135, 593, 1077, 1225
BceAI ACGGC 1 cut(s) 1283
BcgI CGANNNNNNTGC 2 cut(s) 710, 744
BciT130I CCWGG 3 cut(s) 948, 1271, 1382
BcnI CCSGG 1 cut(s) 222
BcoDI GTCTC 1 cut(s) 548
BfaI CTAG 2 cut(s) 173, 318
BfmI CTRYAG 2 cut(s) 878, 1027
BfrI CTTAAG 1 cut(s) 353
BglII AGATCT 1 cut(s) 1048
BisI GCNGC 4 cut(s) 82, 952, 1027, 1220
BlsI GCNGC 4 cut(s) 83, 953, 1028, 1221
BmcAI AGTACT 1 cut(s) 1247
Bme1390I CCNGG 4 cut(s) 222, 948, 1271, 1382
Bme18I GGWCC 1 cut(s) 705
BmgT120I GGNCC 1 cut(s) 705
BmiI GGNNCC 4 cut(s) 7, 706, 945, 1149
BmrFI CCNGG 4 cut(s) 222, 948, 1271, 1382
BmrI ACTGGG 1 cut(s) 711
BmsI GCATC 2 cut(s) 93, 529
BmuI ACTGGG 1 cut(s) 711
BpiI GAAGAC 3 cut(s) 591, 768, 1196
BpmI CTGGAG 1 cut(s) 776
Bpu14I TTCGAA 1 cut(s) 720
BpuMI CCSGG 1 cut(s) 222
BsaAI YACGTR 2 cut(s) 426, 1139
BsaJI CCNNGG 3 cut(s) 220, 689, 1122
BsaXI ACNNNNNCTCC 2 cut(s) 463, 493
Bsc4I CCNNNNNNNGG 3 cut(s) 488, 938, 1276
Bse1I ACTGG 2 cut(s) 123, 706
Bse3DI GCAATG 1 cut(s) 46
BseBI CCWGG 3 cut(s) 948, 1271, 1382
BseDI CCNNGG 3 cut(s) 220, 689, 1122
BseGI GGATG 2 cut(s) 84, 1117
BseLI CCNNNNNNNGG 3 cut(s) 488, 938, 1276
BseMI GCAATG 1 cut(s) 46
BseMII CTCAG 3 cut(s) 222, 791, 1146
BseNI ACTGG 2 cut(s) 123, 706
BseSI GKGCMC 3 cut(s) 307, 834, 846
BseXI GCAGC 2 cut(s) 938, 1013
BsgI GTGCAG 3 cut(s) 561, 627, 1326
BshFI GGCC 1 cut(s) 1222
BshNI GGYRCC 1 cut(s) 5
BsiHKAI GWGCWC 3 cut(s) 194, 307, 834
BsiSI CCGG 2 cut(s) 222, 894
BslI CCNNNNNNNGG 3 cut(s) 488, 938, 1276
BsmAI GTCTC 1 cut(s) 548
BsmBI CGTCTC 1 cut(s) 548
BsnI GGCC 1 cut(s) 1222
Bsp119I TTCGAA 1 cut(s) 720
Bsp1286I GDGCHC 4 cut(s) 194, 307, 834, 846
Bsp143I GATC 8 cut(s) 51, 274, 298, 751, 943, 1048, 1114, 1309
BspACI CCGC 5 cut(s) 82, 287, 529, 1112, 1219
BspANI GGCC 1 cut(s) 1222
BspCNI CTCAG 3 cut(s) 223, 792, 1147
BspLI GGNNCC 4 cut(s) 7, 706, 945, 1149
BspMAI CTGCAG 2 cut(s) 882, 1031
BspPI GGATC 5 cut(s) 59, 306, 938, 951, 1122
BspT104I TTCGAA 1 cut(s) 720
BspT107I GGYRCC 1 cut(s) 5
BspTI CTTAAG 1 cut(s) 353
BsrDI GCAATG 1 cut(s) 46
BsrI ACTGG 2 cut(s) 123, 706
BssECI CCNNGG 3 cut(s) 220, 689, 1122
BssMI GATC 8 cut(s) 51, 274, 298, 751, 943, 1048, 1114, 1309
BssT1I CCWWGG 1 cut(s) 1122
Bst2UI CCWGG 3 cut(s) 948, 1271, 1382
Bst4CI ACNGT 1 cut(s) 690
Bst6I CTCTTC 1 cut(s) 257
BstAFI CTTAAG 1 cut(s) 353
BstBAI YACGTR 2 cut(s) 426, 1139
BstBI TTCGAA 1 cut(s) 720
BstC8I GCNNGC 2 cut(s) 37, 194
BstDEI CTNAG 3 cut(s) 231, 800, 1155
BstDSI CCRYGG 1 cut(s) 689
BstENI CCTNNNNNAGG 2 cut(s) 486, 1274
BstF5I GGATG 2 cut(s) 84, 1117
BstKTI GATC 8 cut(s) 54, 277, 301, 754, 946, 1051, 1117, 1312
BstMAI GTCTC 1 cut(s) 548
BstMBI GATC 8 cut(s) 51, 274, 298, 751, 943, 1048, 1114, 1309
BstMWI GCNNNNNNNGC 1 cut(s) 1304
BstNI CCWGG 3 cut(s) 948, 1271, 1382
BstNSI RCATGY 1 cut(s) 39
BstSCI CCNGG 4 cut(s) 220, 946, 1269, 1380
BstSFI CTRYAG 2 cut(s) 878, 1027
BstSLI GKGCMC 3 cut(s) 307, 834, 846
BstV1I GCAGC 2 cut(s) 938, 1013
BstV2I GAAGAC 3 cut(s) 591, 768, 1196
BstX2I RGATCY 2 cut(s) 943, 1048
BstYI RGATCY 2 cut(s) 943, 1048
BsuRI GGCC 1 cut(s) 1222
BtgI CCRYGG 1 cut(s) 689
BtsCI GGATG 2 cut(s) 84, 1117
BtsI GCAGTG 1 cut(s) 339
BtsIMutI CAGTG 4 cut(s) 130, 228, 339, 957
Cac8I GCNNGC 2 cut(s) 37, 194
Cfr13I GGNCC 1 cut(s) 705
CseI GACGC 1 cut(s) 565
Csp6I GTAC 2 cut(s) 6, 1246
CviAII CATG 3 cut(s) 36, 518, 1259
CviQI GTAC 2 cut(s) 6, 1246
DdeI CTNAG 3 cut(s) 231, 800, 1155
DpnI GATC 8 cut(s) 53, 276, 300, 753, 945, 1050, 1116, 1311
DpnII GATC 8 cut(s) 51, 274, 298, 751, 943, 1048, 1114, 1309
Eam1104I CTCTTC 1 cut(s) 257
EarI CTCTTC 1 cut(s) 257
EciI GGCGGA 1 cut(s) 1127
Ecl136II GAGCTC 1 cut(s) 192
Eco130I CCWWGG 1 cut(s) 1122
Eco24I GRGCYC 1 cut(s) 194
Eco47I GGWCC 1 cut(s) 705
Eco53kI GAGCTC 1 cut(s) 192
Eco57I CTGAAG 3 cut(s) 471, 527, 981
Eco72I CACGTG 2 cut(s) 426, 1139
EcoICRI GAGCTC 1 cut(s) 192
EcoNI CCTNNNNNAGG 2 cut(s) 486, 1274
EcoRI GAATTC 1 cut(s) 208
EcoRII CCWGG 3 cut(s) 946, 1269, 1380
EcoT14I CCWWGG 1 cut(s) 1122
EcoT22I ATGCAT 1 cut(s) 37
EcoT38I GRGCYC 1 cut(s) 194
ErhI CCWWGG 1 cut(s) 1122
Esp3I CGTCTC 1 cut(s) 548
FaeI CATG 3 cut(s) 39, 521, 1262
FatI CATG 3 cut(s) 35, 517, 1258
Fnu4HI GCNGC 4 cut(s) 82, 952, 1027, 1220
FokI GGATG 2 cut(s) 71, 1104
FriOI GRGCYC 1 cut(s) 194
Fsp4HI GCNGC 4 cut(s) 82, 952, 1027, 1220
FspBI CTAG 2 cut(s) 173, 318
GluI GCNGC 4 cut(s) 82, 952, 1027, 1220
GsuI CTGGAG 1 cut(s) 776
HaeIII GGCC 1 cut(s) 1222
HapII CCGG 2 cut(s) 222, 894
HgaI GACGC 1 cut(s) 565
Hin1II CATG 3 cut(s) 39, 521, 1262
HindIII AAGCTT 4 cut(s) 23, 327, 449, 884
HinfI GANTC 9 cut(s) 157, 264, 461, 525, 545, 660, 988, 1130, 1209
HpaII CCGG 2 cut(s) 222, 894
HphI GGTGA 3 cut(s) 126, 1274, 1291
Hpy166II GTNNAC 4 cut(s) 62, 156, 305, 832
Hpy188I TCNGA 1 cut(s) 507
Hpy188III TCNNGA 9 cut(s) 173, 536, 740, 755, 821, 1016, 1073, 1082, 1331
Hpy8I GTNNAC 4 cut(s) 62, 156, 305, 832
Hpy99I CGWCG 1 cut(s) 249
HpyAV CCTTC 1 cut(s) 107
HpyCH4III ACNGT 1 cut(s) 690
HpyCH4IV ACGT 2 cut(s) 425, 1138
HpyF10VI GCNNNNNNNGC 1 cut(s) 1304
HpyF3I CTNAG 3 cut(s) 231, 800, 1155
HpySE526I ACGT 2 cut(s) 425, 1138
Hsp92II CATG 3 cut(s) 39, 521, 1262
KpnI GGTACC 1 cut(s) 9
Kzo9I GATC 8 cut(s) 51, 274, 298, 751, 943, 1048, 1114, 1309
LmnI GCTCC 2 cut(s) 736, 934
Lsp1109I GCAGC 2 cut(s) 938, 1013
LweI GCATC 2 cut(s) 93, 529
MaeI CTAG 2 cut(s) 173, 318
MaeII ACGT 2 cut(s) 425, 1138
MaeIII GTNAC 5 cut(s) 469, 918, 1008, 1237, 1279
MalI GATC 8 cut(s) 53, 276, 300, 753, 945, 1050, 1116, 1311
MboI GATC 8 cut(s) 51, 274, 298, 751, 943, 1048, 1114, 1309
MboII GAAGA 9 cut(s) 244, 371, 505, 596, 707, 773, 836, 974, 1201
MflI RGATCY 2 cut(s) 943, 1048
MhlI GDGCHC 4 cut(s) 194, 307, 834, 846
MluCI AATT 9 cut(s) 72, 208, 310, 628, 897, 911, 933, 967, 1371
MlyI GAGTC 4 cut(s) 151, 539, 654, 1124
MmeI TCCRAC 2 cut(s) 125, 1013
MnlI CCTC 8 cut(s) 104, 138, 260, 272, 751, 794, 1120, 1207
Mph1103I ATGCAT 1 cut(s) 37
MroXI GAANNNNTTC 3 cut(s) 375, 512, 1146
MseI TTAA 5 cut(s) 354, 389, 590, 633, 816
MslI CAYNNNNRTG 2 cut(s) 139, 1141
MspCI CTTAAG 1 cut(s) 353
MspI CCGG 2 cut(s) 222, 894
MspR9I CCNGG 4 cut(s) 222, 948, 1271, 1382
MvaI CCWGG 3 cut(s) 948, 1271, 1382
MwoI GCNNNNNNNGC 1 cut(s) 1304
NciI CCSGG 1 cut(s) 222
NdeII GATC 8 cut(s) 51, 274, 298, 751, 943, 1048, 1114, 1309
NlaIII CATG 3 cut(s) 39, 521, 1262
NlaIV GGNNCC 4 cut(s) 7, 706, 945, 1149
NmeAIII GCCGAG 1 cut(s) 1112
NmuCI GTSAC 3 cut(s) 918, 1237, 1279
NsiI ATGCAT 1 cut(s) 37
NspI RCATGY 1 cut(s) 39
NspV TTCGAA 1 cut(s) 720
PaeI GCATGC 1 cut(s) 39
PdmI GAANNNNTTC 3 cut(s) 375, 512, 1146
PfeI GAWTC 5 cut(s) 264, 461, 525, 988, 1209
PflMI CCANNNNNTGG 1 cut(s) 938
PfoI TCCNGGA 2 cut(s) 1269, 1380
PkrI GCNGC 4 cut(s) 83, 953, 1028, 1221
PleI GAGTC 4 cut(s) 151, 539, 654, 1124
PmaCI CACGTG 2 cut(s) 426, 1139
PmlI CACGTG 2 cut(s) 426, 1139
PpsI GAGTC 4 cut(s) 151, 539, 654, 1124
Ppu21I YACGTR 2 cut(s) 426, 1139
PshBI ATTAAT 1 cut(s) 816
Psp124BI GAGCTC 1 cut(s) 194
Psp6I CCWGG 3 cut(s) 946, 1269, 1380
PspCI CACGTG 2 cut(s) 426, 1139
PspGI CCWGG 3 cut(s) 946, 1269, 1380
PspN4I GGNNCC 4 cut(s) 7, 706, 945, 1149
PspPI GGNCC 1 cut(s) 705
PstI CTGCAG 2 cut(s) 882, 1031
PsuI RGATCY 2 cut(s) 943, 1048
RsaI GTAC 2 cut(s) 7, 1247
RsaNI GTAC 2 cut(s) 6, 1246
RseI CAYNNNNRTG 2 cut(s) 139, 1141
SacI GAGCTC 1 cut(s) 194
SaqAI TTAA 5 cut(s) 354, 389, 590, 633, 816
SatI GCNGC 4 cut(s) 82, 952, 1027, 1220
Sau3AI GATC 8 cut(s) 51, 274, 298, 751, 943, 1048, 1114, 1309
Sau96I GGNCC 1 cut(s) 705
ScaI AGTACT 1 cut(s) 1247
SchI GAGTC 4 cut(s) 151, 539, 654, 1124
ScrFI CCNGG 4 cut(s) 222, 948, 1271, 1382
SduI GDGCHC 4 cut(s) 194, 307, 834, 846
SfaNI GCATC 2 cut(s) 93, 529
SfcI CTRYAG 2 cut(s) 878, 1027
SfuI TTCGAA 1 cut(s) 720
SinI GGWCC 1 cut(s) 705
SmiMI CAYNNNNRTG 2 cut(s) 139, 1141
SmlI CTYRAG 1 cut(s) 353
SmoI CTYRAG 1 cut(s) 353
SphI GCATGC 1 cut(s) 39
Sse9I AATT 9 cut(s) 72, 208, 310, 628, 897, 911, 933, 967, 1371
SsiI CCGC 5 cut(s) 82, 287, 529, 1112, 1219
SspI AATATT 1 cut(s) 712
SspMI CTAG 2 cut(s) 173, 318
SstI GAGCTC 1 cut(s) 194
StyD4I CCNGG 4 cut(s) 220, 946, 1269, 1380
StyI CCWWGG 1 cut(s) 1122
TaaI ACNGT 1 cut(s) 690
TaiI ACGT 2 cut(s) 428, 1141
TaqI TCGA 7 cut(s) 277, 369, 582, 720, 822, 1212, 1358
TasI AATT 9 cut(s) 72, 208, 310, 628, 897, 911, 933, 967, 1371
TatI WGTACW 1 cut(s) 1245
TauI GCSGC 2 cut(s) 84, 1222
TfiI GAWTC 5 cut(s) 264, 461, 525, 988, 1209
Tru1I TTAA 5 cut(s) 354, 389, 590, 633, 816
Tru9I TTAA 5 cut(s) 354, 389, 590, 633, 816
TscAI CASTG 4 cut(s) 130, 235, 346, 964
TseFI GTSAC 3 cut(s) 918, 1237, 1279
TseI GCWGC 2 cut(s) 951, 1026
Tsp45I GTSAC 3 cut(s) 918, 1237, 1279
TspDTI ATGAA 4 cut(s) 84, 371, 870, 1334
TspRI CASTG 4 cut(s) 130, 235, 346, 964
Van91I CCANNNNNTGG 1 cut(s) 938
Vha464I CTTAAG 1 cut(s) 353
VneI GTGCAC 2 cut(s) 303, 830
VpaK11BI GGWCC 1 cut(s) 705
VspI ATTAAT 1 cut(s) 816
XagI CCTNNNNNAGG 2 cut(s) 486, 1274
XapI RAATTY 4 cut(s) 72, 208, 628, 911
XbaI TCTAGA 1 cut(s) 172
XceI RCATGY 1 cut(s) 39
XmnI GAANNNNTTC 3 cut(s) 375, 512, 1146
XspI CTAG 2 cut(s) 173, 318
ZrmI AGTACT 1 cut(s) 1247
Zsp2I ATGCAT 1 cut(s) 37
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.