FvH4_3g18162

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000079
Physical Location & Seq
Reverse (-)
11597473 .. 11598939
1467 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g18162.t1

Sequence Viewer

Length: 1023 bp
ATGAGACCAGGTGGATCGTTGATAACTCGGTCTGAATCTATGTTCAGCGAATTAATGGATAACCAATCCATCAGTAATGTTGTTGAACACAATCTTCACATTCAAGAGTCTGACTTTCGTGACGACCTTTATGAGTTGCCTATAAGCCTTTTCAATTTGAGGAGTTTAGTGATCCTGAGGCTGGGACTGGAAGCAAAATATGTTTTCATTCCTCCCAACTCTAATTGTTTTCCATGTCTCAAGCTTCTTCAAGTTGAAGTCTTTGTTCCTGATCCTGCCACAATGGAGAGTCTCTTTACTTGTGGTCCTGTACTTGAACACTTGATCATAGATGGATATCTTGGCGATGAACAATATTTGCCTTTCAATATCTCTGCACCTGAACTGAAGAGACTGGAAATGACATCCAGTTATGATCACAGACCAAGTAATCATGAGGAACTGATCCCCAACTTCAAGTTTAACATCAATGCTCCTAAGCTTGAAAAGTTTGAATTGGAGGAGAGCTGTTTGGCGAGATATGCTGTGAGTGCGAAGTCCCCAAGGGAAGCCAGCATTACTTTCACAGACCTGGATTCATTTGAGGACCCGGAAAACTTCTTCAGTTCAGATCCAGCCACTGCAAGCCATTTTAATCTGCCTACACTAAATGATTTGAAGCATCTGGAGCTATTTCTGGAAGACTGCTGGTCTAGGCAACTATTGTTTAGATTGCTGGCTATATCACCGAATCTAGAAAATCTTGTGCTTGAAATCGAAGGGAATGGCTGGTCTTCGCAAAAGCTTGTGCCTCGTTGTTTGGTGTCATCCCTCAAGACTCTGTCTATACGTGGATTAAAGTCTGATGATATGGAAATGGTCATGTTCTTGTTGAAGAATAGTAAAGTCTATCTCTCTGCAGCTGACATATATATCACATGTAAAGCGGGAAATCGCGACGTCTTTGGGTTCCAGAACCTGTCAGGTCGAATTTCCAGAGCTCAATATCACCGAGTGGCTTATGCATGGAGACCTTGTCCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

341

Amino Acids

38.79

Weight (kDa)

5.13

Isoelectric Point (pI)

47.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At5g56370 PF24758 32 - 169 1.8e-06 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 262 - 296 5.2e-07 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 942
AccII CGCG 1 cut(s) 936
AciI CCGC 1 cut(s) 926
AclWI GGATC 5 cut(s) 22, 166, 266, 439, 605
AcsI RAATTY 1 cut(s) 969
AcuI CTGAAG 2 cut(s) 407, 586
AcyI GRCGYC 1 cut(s) 939
AdeI CACNNNGTG 1 cut(s) 994
AfaI GTAC 1 cut(s) 312
AfiI CCNNNNNNNGG 1 cut(s) 181
AflIII ACRYGT 1 cut(s) 917
AhdI GACNNNNNGTC 1 cut(s) 688
AjnI CCWGG 2 cut(s) 7, 570
AluBI AGCT 7 cut(s) 244, 481, 507, 670, 784, 902, 980
AluI AGCT 7 cut(s) 244, 481, 507, 670, 784, 902, 980
Alw21I GWGCWC 1 cut(s) 982
Alw26I GTCTC 4 cut(s) 242, 296, 385, 1003
AlwI GGATC 5 cut(s) 22, 166, 266, 439, 605
AlwNI CAGNNNCTG 2 cut(s) 620, 958
ApeKI GCWGC 1 cut(s) 899
ApoI RAATTY 1 cut(s) 969
AseI ATTAAT 1 cut(s) 53
AspS9I GGNCC 2 cut(s) 305, 586
AsuC2I CCSGG 1 cut(s) 590
AsuHPI GGTGA 2 cut(s) 717, 980
AvaII GGWCC 2 cut(s) 305, 586
AxyI CCTNAGG 1 cut(s) 176
BanII GRGCYC 1 cut(s) 982
BbsI GAAGAC 2 cut(s) 687, 765
Bbv12I GWGCWC 1 cut(s) 982
BbvI GCAGC 1 cut(s) 911
BccI CCATC 2 cut(s) 77, 326
BciT130I CCWGG 2 cut(s) 9, 572
BclI TGATCA 2 cut(s) 324, 415
BcnI CCSGG 1 cut(s) 590
BcoDI GTCTC 4 cut(s) 242, 296, 385, 1003
BfaI CTAG 2 cut(s) 693, 734
BfmI CTRYAG 1 cut(s) 897
BisI GCNGC 1 cut(s) 900
BlsI GCNGC 1 cut(s) 901
Bme1390I CCNGG 3 cut(s) 9, 572, 590
Bme18I GGWCC 2 cut(s) 305, 586
BmeRI GACNNNNNGTC 1 cut(s) 688
BmgT120I GGNCC 2 cut(s) 305, 586
BmiI GGNNCC 2 cut(s) 588, 950
BmrFI CCNGG 3 cut(s) 9, 572, 590
BmsI GCATC 1 cut(s) 670
BpiI GAAGAC 2 cut(s) 687, 765
BpmI CTGGAG 1 cut(s) 686
Bpu10I CCTNAGC 1 cut(s) 477
BpuEI CTTGAG 2 cut(s) 224, 797
BpuMI CCSGG 1 cut(s) 590
BsaAI YACGTR 1 cut(s) 830
BsaBI GATNNNNATC 1 cut(s) 336
BsaHI GRCGYC 1 cut(s) 939
BsaI GGTCTC 1 cut(s) 1003
BsaJI CCNNGG 1 cut(s) 542
BsaXI ACNNNNNCTCC 1 cut(s) 1000
Bsc4I CCNNNNNNNGG 1 cut(s) 181
Bse1I ACTGG 3 cut(s) 192, 399, 408
Bse21I CCTNAGG 1 cut(s) 176
Bse8I GATNNNNATC 1 cut(s) 336
BseBI CCWGG 2 cut(s) 9, 572
BseDI CCNNGG 1 cut(s) 542
BseGI GGATG 2 cut(s) 404, 806
BseJI GATNNNNATC 1 cut(s) 336
BseLI CCNNNNNNNGG 1 cut(s) 181
BseMII CTCAG 1 cut(s) 167
BseNI ACTGG 3 cut(s) 192, 399, 408
BseRI GAGGAG 2 cut(s) 175, 515
BseXI GCAGC 1 cut(s) 911
BseYI CCCAGC 1 cut(s) 181
BsgI GTGCAG 1 cut(s) 360
Bsh1236I CGCG 1 cut(s) 936
BsiHKAI GWGCWC 1 cut(s) 982
BsiSI CCGG 1 cut(s) 590
BslFI GGGAC 2 cut(s) 198, 523
BslI CCNNNNNNNGG 1 cut(s) 181
BsmAI GTCTC 4 cut(s) 242, 296, 385, 1003
BsmFI GGGAC 2 cut(s) 198, 523
Bso31I GGTCTC 1 cut(s) 1003
Bsp1286I GDGCHC 1 cut(s) 982
Bsp143I GATC 7 cut(s) 14, 171, 271, 324, 415, 444, 610
Bsp68I TCGCGA 1 cut(s) 936
BspACI CCGC 1 cut(s) 926
BspCNI CTCAG 1 cut(s) 168
BspFNI CGCG 1 cut(s) 936
BspHI TCATGA 1 cut(s) 433
BspLI GGNNCC 2 cut(s) 588, 950
BspMAI CTGCAG 1 cut(s) 901
BspPI GGATC 5 cut(s) 22, 166, 266, 439, 605
BspTNI GGTCTC 1 cut(s) 1003
BsrI ACTGG 3 cut(s) 192, 399, 408
BssECI CCNNGG 1 cut(s) 542
BssMI GATC 7 cut(s) 14, 171, 271, 324, 415, 444, 610
BssNI GRCGYC 1 cut(s) 939
BssT1I CCWWGG 1 cut(s) 542
Bst2UI CCWGG 2 cut(s) 9, 572
Bst6I CTCTTC 1 cut(s) 383
BstACI GRCGYC 1 cut(s) 939
BstBAI YACGTR 1 cut(s) 830
BstC8I GCNNGC 3 cut(s) 553, 625, 717
BstDEI CTNAG 2 cut(s) 176, 477
BstF5I GGATG 2 cut(s) 404, 806
BstFNI CGCG 1 cut(s) 936
BstKTI GATC 7 cut(s) 17, 174, 274, 327, 418, 447, 613
BstMAI GTCTC 4 cut(s) 242, 296, 385, 1003
BstMBI GATC 7 cut(s) 14, 171, 271, 324, 415, 444, 610
BstMWI GCNNNNNNNGC 3 cut(s) 521, 530, 667
BstNI CCWGG 2 cut(s) 9, 572
BstNSI RCATGY 1 cut(s) 921
BstSCI CCNGG 3 cut(s) 7, 570, 588
BstSFI CTRYAG 1 cut(s) 897
BstUI CGCG 1 cut(s) 936
BstV1I GCAGC 1 cut(s) 911
BstV2I GAAGAC 2 cut(s) 687, 765
BstX2I RGATCY 1 cut(s) 610
BstYI RGATCY 1 cut(s) 610
Bsu36I CCTNAGG 1 cut(s) 176
BtgZI GCGATG 1 cut(s) 360
BtsCI GGATG 2 cut(s) 404, 806
BtsI GCAGTG 1 cut(s) 618
BtsIMutI CAGTG 1 cut(s) 618
BtuMI TCGCGA 1 cut(s) 936
Cac8I GCNNGC 3 cut(s) 553, 625, 717
CaiI CAGNNNCTG 2 cut(s) 620, 958
CciI TCATGA 1 cut(s) 433
Cfr13I GGNCC 2 cut(s) 305, 586
CsiI ACCWGGT 1 cut(s) 7
Csp6I GTAC 1 cut(s) 311
CviAII CATG 5 cut(s) 234, 434, 862, 918, 1005
CviQI GTAC 1 cut(s) 311
DdeI CTNAG 2 cut(s) 176, 477
DpnI GATC 7 cut(s) 16, 173, 273, 326, 417, 446, 612
DpnII GATC 7 cut(s) 14, 171, 271, 324, 415, 444, 610
DraIII CACNNNGTG 1 cut(s) 994
DriI GACNNNNNGTC 1 cut(s) 688
Eam1104I CTCTTC 1 cut(s) 383
Eam1105I GACNNNNNGTC 1 cut(s) 688
EarI CTCTTC 1 cut(s) 383
Ecl136II GAGCTC 1 cut(s) 980
Eco130I CCWWGG 1 cut(s) 542
Eco24I GRGCYC 1 cut(s) 982
Eco31I GGTCTC 1 cut(s) 1003
Eco32I GATATC 1 cut(s) 338
Eco47I GGWCC 2 cut(s) 305, 586
Eco53kI GAGCTC 1 cut(s) 980
Eco57I CTGAAG 2 cut(s) 407, 586
Eco81I CCTNAGG 1 cut(s) 176
EcoICRI GAGCTC 1 cut(s) 980
EcoO109I RGGNCCY 1 cut(s) 586
EcoRII CCWGG 2 cut(s) 7, 570
EcoRV GATATC 1 cut(s) 338
EcoT14I CCWWGG 1 cut(s) 542
EcoT22I ATGCAT 1 cut(s) 1006
EcoT38I GRGCYC 1 cut(s) 982
ErhI CCWWGG 1 cut(s) 542
FaeI CATG 5 cut(s) 237, 437, 865, 921, 1008
FaqI GGGAC 2 cut(s) 198, 523
FatI CATG 5 cut(s) 233, 433, 861, 917, 1004
FauI CCCGC 1 cut(s) 919
FbaI TGATCA 2 cut(s) 324, 415
Fnu4HI GCNGC 1 cut(s) 900
FokI GGATG 2 cut(s) 391, 793
FriOI GRGCYC 1 cut(s) 982
Fsp4HI GCNGC 1 cut(s) 900
FspBI CTAG 2 cut(s) 693, 734
GluI GCNGC 1 cut(s) 900
GsaI CCCAGC 1 cut(s) 185
GsuI CTGGAG 1 cut(s) 686
HapII CCGG 1 cut(s) 590
Hin1I GRCGYC 1 cut(s) 939
Hin1II CATG 5 cut(s) 237, 437, 865, 921, 1008
HindIII AAGCTT 3 cut(s) 242, 479, 782
HinfI GANTC 6 cut(s) 35, 107, 289, 575, 730, 817
HpaII CCGG 1 cut(s) 590
HphI GGTGA 2 cut(s) 717, 980
Hpy188I TCNGA 4 cut(s) 34, 112, 610, 844
Hpy99I CGWCG 1 cut(s) 941
HpyAV CCTTC 1 cut(s) 752
HpyCH4IV ACGT 2 cut(s) 829, 939
HpyCH4V TGCA 4 cut(s) 377, 623, 899, 1004
HpyF10VI GCNNNNNNNGC 3 cut(s) 521, 530, 667
HpyF3I CTNAG 2 cut(s) 176, 477
HpySE526I ACGT 2 cut(s) 829, 939
Hsp92I GRCGYC 1 cut(s) 939
Hsp92II CATG 5 cut(s) 237, 437, 865, 921, 1008
Ksp22I TGATCA 2 cut(s) 324, 415
Kzo9I GATC 7 cut(s) 14, 171, 271, 324, 415, 444, 610
LmnI GCTCC 2 cut(s) 478, 667
Lsp1109I GCAGC 1 cut(s) 911
LweI GCATC 1 cut(s) 670
MabI ACCWGGT 1 cut(s) 7
MaeI CTAG 2 cut(s) 693, 734
MaeII ACGT 2 cut(s) 829, 939
MaeIII GTNAC 1 cut(s) 119
MalI GATC 7 cut(s) 16, 173, 273, 326, 417, 446, 612
MboI GATC 7 cut(s) 14, 171, 271, 324, 415, 444, 610
MboII GAAGA 7 cut(s) 86, 239, 400, 592, 692, 765, 886
MflI RGATCY 1 cut(s) 610
MhlI GDGCHC 1 cut(s) 982
MluCI AATT 5 cut(s) 50, 154, 223, 494, 969
MlyI GAGTC 3 cut(s) 116, 298, 811
MnlI CCTC 8 cut(s) 153, 171, 222, 430, 493, 577, 801, 821
Mph1103I ATGCAT 1 cut(s) 1006
MseI TTAA 4 cut(s) 53, 462, 633, 836
MspA1I CMGCKG 1 cut(s) 902
MspI CCGG 1 cut(s) 590
MspR9I CCNGG 3 cut(s) 9, 572, 590
MvaI CCWGG 2 cut(s) 9, 572
MvnI CGCG 1 cut(s) 936
MwoI GCNNNNNNNGC 3 cut(s) 521, 530, 667
NciI CCSGG 1 cut(s) 590
NdeII GATC 7 cut(s) 14, 171, 271, 324, 415, 444, 610
NlaIII CATG 5 cut(s) 237, 437, 865, 921, 1008
NlaIV GGNNCC 2 cut(s) 588, 950
NmuCI GTSAC 1 cut(s) 119
NruI TCGCGA 1 cut(s) 936
NsiI ATGCAT 1 cut(s) 1006
NspI RCATGY 1 cut(s) 921
PagI TCATGA 1 cut(s) 433
PciI ACATGT 1 cut(s) 917
PfeI GAWTC 3 cut(s) 35, 575, 730
PflFI GACNNNGTC 2 cut(s) 820, 1014
PkrI GCNGC 1 cut(s) 901
PleI GAGTC 3 cut(s) 115, 297, 811
PpsI GAGTC 3 cut(s) 115, 297, 811
Ppu21I YACGTR 1 cut(s) 830
PpuMI RGGWCCY 1 cut(s) 586
PscI ACATGT 1 cut(s) 917
PshBI ATTAAT 1 cut(s) 53
Psp124BI GAGCTC 1 cut(s) 982
Psp5II RGGWCCY 1 cut(s) 586
Psp6I CCWGG 2 cut(s) 7, 570
PspFI CCCAGC 1 cut(s) 181
PspGI CCWGG 2 cut(s) 7, 570
PspN4I GGNNCC 2 cut(s) 588, 950
PspPI GGNCC 2 cut(s) 305, 586
PspPPI RGGWCCY 1 cut(s) 586
PstI CTGCAG 1 cut(s) 901
PstNI CAGNNNCTG 2 cut(s) 620, 958
PsuI RGATCY 1 cut(s) 610
PsyI GACNNNGTC 2 cut(s) 820, 1014
PvuII CAGCTG 1 cut(s) 902
RruI TCGCGA 1 cut(s) 936
RsaI GTAC 1 cut(s) 312
RsaNI GTAC 1 cut(s) 311
SacI GAGCTC 1 cut(s) 982
SaqAI TTAA 4 cut(s) 53, 462, 633, 836
SatI GCNGC 1 cut(s) 900
Sau3AI GATC 7 cut(s) 14, 171, 271, 324, 415, 444, 610
Sau96I GGNCC 2 cut(s) 305, 586
SchI GAGTC 3 cut(s) 116, 298, 811
ScrFI CCNGG 3 cut(s) 9, 572, 590
SduI GDGCHC 1 cut(s) 982
SexAI ACCWGGT 1 cut(s) 7
SfaNI GCATC 1 cut(s) 670
SfcI CTRYAG 1 cut(s) 897
SinI GGWCC 2 cut(s) 305, 586
SmlI CTYRAG 2 cut(s) 239, 812
SmoI CTYRAG 2 cut(s) 239, 812
Sse9I AATT 5 cut(s) 50, 154, 223, 494, 969
SsiI CCGC 1 cut(s) 926
SspI AATATT 1 cut(s) 356
SspMI CTAG 2 cut(s) 693, 734
SstI GAGCTC 1 cut(s) 982
StyD4I CCNGG 3 cut(s) 7, 570, 588
StyI CCWWGG 1 cut(s) 542
TaiI ACGT 2 cut(s) 832, 942
TaqI TCGA 2 cut(s) 756, 967
TaqII GACCGA 1 cut(s) 18
TasI AATT 5 cut(s) 50, 154, 223, 494, 969
TatI WGTACW 1 cut(s) 310
TfiI GAWTC 3 cut(s) 35, 575, 730
Tru1I TTAA 4 cut(s) 53, 462, 633, 836
Tru9I TTAA 4 cut(s) 53, 462, 633, 836
TscAI CASTG 1 cut(s) 625
TseFI GTSAC 1 cut(s) 119
TseI GCWGC 1 cut(s) 899
Tsp45I GTSAC 1 cut(s) 119
TspDTI ATGAA 3 cut(s) 196, 363, 567
TspRI CASTG 1 cut(s) 625
Tth111I GACNNNGTC 2 cut(s) 820, 1014
VpaK11BI GGWCC 2 cut(s) 305, 586
VspI ATTAAT 1 cut(s) 53
XapI RAATTY 1 cut(s) 969
XbaI TCTAGA 1 cut(s) 733
XceI RCATGY 1 cut(s) 921
XspI CTAG 2 cut(s) 693, 734
ZraI GACGTC 1 cut(s) 940
Zsp2I ATGCAT 1 cut(s) 1006
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.