pycom03g20210

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
OG0000079
Physical Location & Seq
Forward (+)
20744537 .. 20747396
2860 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g20210.5

Sequence Viewer

Length: 1719 bp
ATGTATCAGAAAGTAACCGTCAATATACATGCATGGTTTAAATTGCCCAACCATACATACATATTTTATACATATTTAAACTACATTAATAAAACTCTCTTTGTTAATCAAAAGATAGTAAAAAGACAATTTTGTTTTCTCTCACAAAACAAAATCAAGGGCAGTAAAATAAATTTACACAAACTAAATTTTATAGTTTTTTCAAACCCTCACCTAAGGATGATTATTGGGCTTACCCAAAAATTGTACAAAAATATGAGTCAAGTTCTCAAAAATGATCGAAGCCTGGAAGGTTCCCACTTCACAGTTGCGGAGGTGATAAAAACGTCGCCGCTTCCGACGCTCCTGTGGTTCTCATTTCCGTCCGTTCTCCGTAGCTTTTTCCTCAGCAGAGTAAAAATGAGCTTGGTGTTGAAACGTCGAGCAAAAGTTAAAGATAGGATCAATGCGCTACCAGATGCACTTCTATGTCACATACTTTCGTTCCTTCCTACAAAATATGCTGTGAGGACCACCATTTTGTCTAGAAGGTGGAAGAACTTATGGACTTCTGTTCCCAATCTCTACTTCAACGACAGAAAAGATTTTCCTTCTTTTCAGGCAGGTCCATATGGCTCTAACCTTTTTACCAGATTTGTTGATCGTGTACTTTACTTCCGCGACTCATCAGACATAAAAAAATTCCGTCTTTCAGTTACCTATACTGATGATTTGTCTCATGTTGATGGTTGGCTTTGCACTGCCGTAAGGCGTAATGTCGTTGAACTTGATTTTGAGCTTTGTCAATCTCATTATAATCAATACCGGGAATTTGAGTTACCTCAGAGCCTTTTCACGTGCACAACACTAACGGTTTTGAAGTTGAGCTCAAACTGCATTACCTATGCTCCTCCTACAGCGGGGTGTTTCCCAAGCCTCAAGTTCCTCTATGTCACAGTTCATTATCCTGATACGGACTCAATTGAAAAGCTTATTTCTTGCTGCCCTATCCTGGAAAACTTGAATATAGATGGAATTCTAAGATGTGACGTAGTTTCAGATATCCATATTTCTGTGCCTACACTGAAGACATTAAGTATAAATCTGTCCGTTGATCGTCAGTATCATGATTACAATCTTTTTATCAATGGCCCAAAGCTTGAAAACATTGATTTCAAGCACGATCTTTCGTCAAATTATTCTCTGGAGCATTCAAAATCCCTAGTAAAAGCTAATATTGTTCTCAAAGAAGTTCCCTGCCGTATAGTTGCACTACTGGAAGCAATATCAAATGTGAAATATCTGTCTCTTTCAGCTGAACGTTTGAAGGAATGGTATCTCCCTGTTTTTCCTAATTTGAGCCAACTGAAGGTGGTTCTTTATTATAGCTGTTATTGGGAAATGCTAGTAATGTTACTCCGTAAGACGCCCAATCTGGAGGATCTTATCGTAGAAGATAGAACCATATGTCAACGAGATTATTCAAGGCTTCGGTGGAATCCACCGAAGTTTTTGCTTGTTTATCTGCGGTCGCACCTCAAGACTATCACCATAAGAGGATTCAAGGGACGAGAGATTGAGAGGGAAGTGTCAAAGTATTTGTTAGAGAACGCTAAGATTTTGAAGAAAATGACGATATATACAAGTCTTGTGCATATTACAGAGAAAGAGCTATACAAGGAATTCTTGATGTTTCAAAGGGGTTCGGTGACTTGTCAAGTTGAATTCATCAAGATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

573

Amino Acids

67.15

Weight (kDa)

9.49

Isoelectric Point (pI)

44.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 795
Acc36I ACCTGC 1 cut(s) 593
AccII CGCG 1 cut(s) 660
AciI CCGC 5 cut(s) 311, 332, 658, 899, 1507
AclI AACGTT 1 cut(s) 1300
AclWI GGATC 2 cut(s) 449, 1428
AcsI RAATTY 7 cut(s) 172, 187, 680, 809, 1014, 1661, 1703
AcuI CTGAAG 2 cut(s) 1085, 1367
AcvI CACGTG 1 cut(s) 837
AcyI GRCGYC 1 cut(s) 1406
AfaI GTAC 2 cut(s) 248, 648
AfiI CCNNNNNNNGG 3 cut(s) 899, 991, 1348
AjnI CCWGG 2 cut(s) 285, 990
AjuI GAANNNNNNNTTGG 2 cut(s) 551, 583
Alw21I GWGCWC 2 cut(s) 842, 869
Alw26I GTCTC 2 cut(s) 720, 1290
Alw44I GTGCAC 1 cut(s) 838
AlwI GGATC 2 cut(s) 449, 1428
AoxI GGCC 1 cut(s) 1129
ApaLI GTGCAC 1 cut(s) 838
ApeKI GCWGC 1 cut(s) 981
ApoI RAATTY 7 cut(s) 172, 187, 680, 809, 1014, 1661, 1703
ArsI GACNNNNNNTTYG 2 cut(s) 502, 534
AseI ATTAAT 1 cut(s) 87
AspLEI GCGC 1 cut(s) 451
AspS9I GGNCC 3 cut(s) 510, 605, 1130
AsuC2I CCSGG 1 cut(s) 806
AsuHPI GGTGA 4 cut(s) 203, 328, 1519, 1699
AvaII GGWCC 2 cut(s) 510, 605
AxyI CCTNAGG 1 cut(s) 215
BaeGI GKGCMC 1 cut(s) 842
BanII GRGCYC 1 cut(s) 869
BbrPI CACGTG 1 cut(s) 837
BbsI GAAGAC 1 cut(s) 1073
Bbv12I GWGCWC 2 cut(s) 842, 869
BbvCI CCTCAGC 1 cut(s) 386
BbvI GCAGC 1 cut(s) 968
BccI CCATC 2 cut(s) 719, 1004
BceAI ACGGC 2 cut(s) 728, 1224
BcgI CGANNNNNNTGC 2 cut(s) 1474, 1508
BciT130I CCWGG 2 cut(s) 287, 992
BcnI CCSGG 1 cut(s) 806
BcoDI GTCTC 2 cut(s) 720, 1290
BfaI CTAG 3 cut(s) 525, 1202, 1385
BfmI CTRYAG 1 cut(s) 894
BfuAI ACCTGC 1 cut(s) 593
BisI GCNGC 2 cut(s) 332, 982
BlsI GCNGC 2 cut(s) 333, 983
Bme1390I CCNGG 3 cut(s) 287, 806, 992
Bme18I GGWCC 2 cut(s) 510, 605
BmgT120I GGNCC 3 cut(s) 510, 605, 1130
BmiI GGNNCC 1 cut(s) 295
BmrFI CCNGG 3 cut(s) 287, 806, 992
BmsI GCATC 1 cut(s) 448
BpiI GAAGAC 1 cut(s) 1073
BpmI CTGGAG 2 cut(s) 1205, 1436
Bpu10I CCTNAGC 1 cut(s) 386
BpuEI CTTGAG 2 cut(s) 902, 1502
BpuMI CCSGG 1 cut(s) 806
BsaAI YACGTR 1 cut(s) 837
BsaBI GATNNNNATC 1 cut(s) 1113
BsaHI GRCGYC 1 cut(s) 1406
BsaXI ACNNNNNCTCC 2 cut(s) 871, 901
Bsc4I CCNNNNNNNGG 3 cut(s) 899, 991, 1348
Bse1I ACTGG 1 cut(s) 1260
Bse21I CCTNAGG 1 cut(s) 215
Bse8I GATNNNNATC 1 cut(s) 1113
BseBI CCWGG 2 cut(s) 287, 992
BseGI GGATG 1 cut(s) 225
BseJI GATNNNNATC 1 cut(s) 1113
BseLI CCNNNNNNNGG 3 cut(s) 899, 991, 1348
BseMII CTCAG 2 cut(s) 400, 836
BseNI ACTGG 1 cut(s) 1260
BseRI GAGGAG 1 cut(s) 879
BseSI GKGCMC 1 cut(s) 842
BseXI GCAGC 1 cut(s) 968
Bsh1236I CGCG 1 cut(s) 660
Bsh1285I CGRYCG 1 cut(s) 1511
BshFI GGCC 1 cut(s) 1131
BsiEI CGRYCG 1 cut(s) 1511
BsiHKAI GWGCWC 2 cut(s) 842, 869
BsiSI CCGG 1 cut(s) 805
BslFI GGGAC 1 cut(s) 1560
BslI CCNNNNNNNGG 3 cut(s) 899, 991, 1348
BsmAI GTCTC 2 cut(s) 720, 1290
BsmFI GGGAC 1 cut(s) 1560
BsmI GAATGC 1 cut(s) 1189
BsnI GGCC 1 cut(s) 1131
Bsp1286I GDGCHC 2 cut(s) 842, 869
Bsp1407I TGTACA 1 cut(s) 246
Bsp143I GATC 6 cut(s) 277, 441, 640, 1093, 1162, 1420
BspACI CCGC 5 cut(s) 311, 332, 658, 899, 1507
BspANI GGCC 1 cut(s) 1131
BspCNI CTCAG 2 cut(s) 399, 835
BspFNI CGCG 1 cut(s) 660
BspHI TCATGA 1 cut(s) 1105
BspLI GGNNCC 1 cut(s) 295
BspMI ACCTGC 1 cut(s) 593
BspPI GGATC 2 cut(s) 449, 1428
BsrGI TGTACA 1 cut(s) 246
BsrI ACTGG 1 cut(s) 1260
BssMI GATC 6 cut(s) 277, 441, 640, 1093, 1162, 1420
BssNI GRCGYC 1 cut(s) 1406
Bst2UI CCWGG 2 cut(s) 287, 992
Bst4CI ACNGT 4 cut(s) 19, 307, 853, 937
BstACI GRCGYC 1 cut(s) 1406
BstAUI TGTACA 1 cut(s) 246
BstBAI YACGTR 1 cut(s) 837
BstDEI CTNAG 5 cut(s) 215, 386, 822, 1019, 1593
BstF5I GGATG 1 cut(s) 225
BstFNI CGCG 1 cut(s) 660
BstHHI GCGC 1 cut(s) 451
BstKTI GATC 6 cut(s) 280, 444, 643, 1096, 1165, 1423
BstMAI GTCTC 2 cut(s) 720, 1290
BstMBI GATC 6 cut(s) 277, 441, 640, 1093, 1162, 1420
BstMCI CGRYCG 1 cut(s) 1511
BstMWI GCNNNNNNNGC 2 cut(s) 340, 873
BstNI CCWGG 2 cut(s) 287, 992
BstNSI RCATGY 1 cut(s) 32
BstSCI CCNGG 3 cut(s) 285, 804, 990
BstSFI CTRYAG 1 cut(s) 894
BstSLI GKGCMC 1 cut(s) 842
BstUI CGCG 1 cut(s) 660
BstV1I GCAGC 1 cut(s) 968
BstV2I GAAGAC 1 cut(s) 1073
BstX2I RGATCY 1 cut(s) 1420
BstYI RGATCY 1 cut(s) 1420
Bsu36I CCTNAGG 1 cut(s) 215
BsuRI GGCC 1 cut(s) 1131
BtsCI GGATG 1 cut(s) 225
BtsI GCAGTG 1 cut(s) 738
BtsIMutI CAGTG 2 cut(s) 738, 1061
BveI ACCTGC 1 cut(s) 593
CciI TCATGA 1 cut(s) 1105
CfoI GCGC 1 cut(s) 451
Cfr13I GGNCC 3 cut(s) 510, 605, 1130
CseI GACGC 2 cut(s) 349, 1414
Csp6I GTAC 2 cut(s) 247, 647
CviAII CATG 4 cut(s) 29, 33, 719, 1106
CviQI GTAC 2 cut(s) 247, 647
DdeI CTNAG 5 cut(s) 215, 386, 822, 1019, 1593
DpnI GATC 6 cut(s) 279, 443, 642, 1095, 1164, 1422
DpnII GATC 6 cut(s) 277, 441, 640, 1093, 1162, 1420
DraI TTTAAA 2 cut(s) 40, 78
Ecl136II GAGCTC 1 cut(s) 867
Eco24I GRGCYC 1 cut(s) 869
Eco32I GATATC 1 cut(s) 1042
Eco47I GGWCC 2 cut(s) 510, 605
Eco53kI GAGCTC 1 cut(s) 867
Eco57I CTGAAG 2 cut(s) 1085, 1367
Eco72I CACGTG 1 cut(s) 837
Eco81I CCTNAGG 1 cut(s) 215
EcoICRI GAGCTC 1 cut(s) 867
EcoRI GAATTC 3 cut(s) 1014, 1661, 1703
EcoRII CCWGG 2 cut(s) 285, 990
EcoRV GATATC 1 cut(s) 1042
EcoT22I ATGCAT 1 cut(s) 34
EcoT38I GRGCYC 1 cut(s) 869
FaeI CATG 4 cut(s) 32, 36, 722, 1109
FalI AAGNNNNNCTT 2 cut(s) 1649, 1681
FaqI GGGAC 1 cut(s) 1560
FatI CATG 4 cut(s) 28, 32, 718, 1105
FauI CCCGC 1 cut(s) 892
FauNDI CATATG 2 cut(s) 610, 1445
Fnu4HI GCNGC 2 cut(s) 332, 982
FokI GGATG 1 cut(s) 232
FriOI GRGCYC 1 cut(s) 869
Fsp4HI GCNGC 2 cut(s) 332, 982
FspBI CTAG 3 cut(s) 525, 1202, 1385
GlaI GCGC 1 cut(s) 450
GluI GCNGC 2 cut(s) 332, 982
GsuI CTGGAG 2 cut(s) 1205, 1436
HaeIII GGCC 1 cut(s) 1131
HapII CCGG 1 cut(s) 805
HgaI GACGC 2 cut(s) 349, 1414
HhaI GCGC 1 cut(s) 451
Hin1I GRCGYC 1 cut(s) 1406
Hin1II CATG 4 cut(s) 32, 36, 722, 1109
Hin6I GCGC 1 cut(s) 449
HinP1I GCGC 1 cut(s) 449
HincII GTYRAC 1 cut(s) 1451
HindII GTYRAC 1 cut(s) 1451
HindIII AAGCTT 2 cut(s) 968, 1136
HinfI GANTC 5 cut(s) 259, 662, 956, 1477, 1539
HpaII CCGG 1 cut(s) 805
HphI GGTGA 4 cut(s) 203, 328, 1519, 1699
Hpy166II GTNNAC 3 cut(s) 647, 840, 1451
Hpy188I TCNGA 5 cut(s) 9, 339, 670, 825, 1039
Hpy188III TCNNGA 8 cut(s) 525, 947, 1106, 1184, 1415, 1519, 1666, 1711
Hpy8I GTNNAC 3 cut(s) 647, 840, 1451
Hpy99I CGWCG 3 cut(s) 331, 343, 423
HpyAV CCTTC 6 cut(s) 284, 497, 522, 600, 1300, 1342
HpyCH4III ACNGT 4 cut(s) 19, 307, 853, 937
HpyCH4IV ACGT 5 cut(s) 326, 418, 836, 1029, 1300
HpyCH4V TGCA 7 cut(s) 32, 461, 738, 840, 876, 1250, 1633
HpyF10VI GCNNNNNNNGC 2 cut(s) 340, 873
HpyF3I CTNAG 5 cut(s) 215, 386, 822, 1019, 1593
HpySE526I ACGT 5 cut(s) 326, 418, 836, 1029, 1300
Hsp92I GRCGYC 1 cut(s) 1406
Hsp92II CATG 4 cut(s) 32, 36, 722, 1109
HspAI GCGC 1 cut(s) 449
Kzo9I GATC 6 cut(s) 277, 441, 640, 1093, 1162, 1420
LmnI GCTCC 3 cut(s) 348, 892, 1186
Lsp1109I GCAGC 1 cut(s) 968
LweI GCATC 1 cut(s) 448
MaeI CTAG 3 cut(s) 525, 1202, 1385
MaeII ACGT 5 cut(s) 326, 418, 836, 1029, 1300
MaeIII GTNAC 8 cut(s) 13, 470, 694, 816, 931, 1025, 1392, 1687
MalI GATC 6 cut(s) 279, 443, 642, 1095, 1164, 1422
MboI GATC 6 cut(s) 277, 441, 640, 1093, 1162, 1420
MboII GAAGA 4 cut(s) 547, 1078, 1445, 1615
MfeI CAATTG 1 cut(s) 960
MflI RGATCY 1 cut(s) 1420
MhlI GDGCHC 2 cut(s) 842, 869
MlyI GAGTC 3 cut(s) 268, 656, 950
MmeI TCCRAC 1 cut(s) 362
Mph1103I ATGCAT 1 cut(s) 34
MseI TTAA 6 cut(s) 39, 77, 87, 105, 432, 1073
MslI CAYNNNNRTG 3 cut(s) 466, 723, 1712
MspA1I CMGCKG 2 cut(s) 899, 1295
MspI CCGG 1 cut(s) 805
MspR9I CCNGG 3 cut(s) 287, 806, 992
MunI CAATTG 1 cut(s) 960
Mva1269I GAATGC 1 cut(s) 1189
MvaI CCWGG 2 cut(s) 287, 992
MvnI CGCG 1 cut(s) 660
MwoI GCNNNNNNNGC 2 cut(s) 340, 873
NciI CCSGG 1 cut(s) 806
NdeI CATATG 2 cut(s) 610, 1445
NdeII GATC 6 cut(s) 277, 441, 640, 1093, 1162, 1420
NlaIII CATG 4 cut(s) 32, 36, 722, 1109
NlaIV GGNNCC 1 cut(s) 295
NmuCI GTSAC 4 cut(s) 470, 931, 1025, 1687
NsiI ATGCAT 1 cut(s) 34
NspI RCATGY 1 cut(s) 32
PagI TCATGA 1 cut(s) 1105
PcsI WCGNNNNNNNCGW 1 cut(s) 335
PctI GAATGC 1 cut(s) 1189
PfeI GAWTC 2 cut(s) 1477, 1539
PfoI TCCNGGA 1 cut(s) 990
PkrI GCNGC 2 cut(s) 333, 983
PleI GAGTC 3 cut(s) 267, 656, 950
PmaCI CACGTG 1 cut(s) 837
PmlI CACGTG 1 cut(s) 837
PpsI GAGTC 3 cut(s) 267, 656, 950
Ppu21I YACGTR 1 cut(s) 837
PshBI ATTAAT 1 cut(s) 87
PsiI TTATAA 1 cut(s) 795
Psp124BI GAGCTC 1 cut(s) 869
Psp1406I AACGTT 1 cut(s) 1300
Psp6I CCWGG 2 cut(s) 285, 990
PspCI CACGTG 1 cut(s) 837
PspGI CCWGG 2 cut(s) 285, 990
PspN4I GGNNCC 1 cut(s) 295
PspPI GGNCC 3 cut(s) 510, 605, 1130
PsuI RGATCY 1 cut(s) 1420
PvuII CAGCTG 1 cut(s) 1295
RsaI GTAC 2 cut(s) 248, 648
RsaNI GTAC 2 cut(s) 247, 647
RseI CAYNNNNRTG 3 cut(s) 466, 723, 1712
SacI GAGCTC 1 cut(s) 869
SaqAI TTAA 6 cut(s) 39, 77, 87, 105, 432, 1073
SatI GCNGC 2 cut(s) 332, 982
Sau3AI GATC 6 cut(s) 277, 441, 640, 1093, 1162, 1420
Sau96I GGNCC 3 cut(s) 510, 605, 1130
SchI GAGTC 3 cut(s) 268, 656, 950
ScrFI CCNGG 3 cut(s) 287, 806, 992
SduI GDGCHC 2 cut(s) 842, 869
SfaNI GCATC 1 cut(s) 448
SfcI CTRYAG 1 cut(s) 894
SinI GGWCC 2 cut(s) 510, 605
SmiMI CAYNNNNRTG 3 cut(s) 466, 723, 1712
SmlI CTYRAG 2 cut(s) 917, 1517
SmoI CTYRAG 2 cut(s) 917, 1517
SsiI CCGC 5 cut(s) 311, 332, 658, 899, 1507
SspI AATATT 1 cut(s) 1216
SspMI CTAG 3 cut(s) 525, 1202, 1385
SstI GAGCTC 1 cut(s) 869
StyD4I CCNGG 3 cut(s) 285, 804, 990
TaaI ACNGT 4 cut(s) 19, 307, 853, 937
TaiI ACGT 5 cut(s) 329, 421, 839, 1032, 1303
TaqI TCGA 2 cut(s) 280, 421
TatI WGTACW 2 cut(s) 246, 646
TauI GCSGC 1 cut(s) 334
TfiI GAWTC 2 cut(s) 1477, 1539
Tru1I TTAA 6 cut(s) 39, 77, 87, 105, 432, 1073
Tru9I TTAA 6 cut(s) 39, 77, 87, 105, 432, 1073
TscAI CASTG 2 cut(s) 745, 1068
TseFI GTSAC 4 cut(s) 470, 931, 1025, 1687
TseI GCWGC 1 cut(s) 981
Tsp45I GTSAC 4 cut(s) 470, 931, 1025, 1687
TspDTI ATGAA 2 cut(s) 929, 1696
TspGWI ACGGA 7 cut(s) 351, 355, 362, 674, 968, 1078, 1388
TspRI CASTG 2 cut(s) 745, 1068
VneI GTGCAC 1 cut(s) 838
VpaK11BI GGWCC 2 cut(s) 510, 605
VspI ATTAAT 1 cut(s) 87
XapI RAATTY 7 cut(s) 172, 187, 680, 809, 1014, 1661, 1703
XbaI TCTAGA 1 cut(s) 524
XceI RCATGY 1 cut(s) 32
XspI CTAG 3 cut(s) 525, 1202, 1385
Zsp2I ATGCAT 1 cut(s) 34
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.