Rw5G036830

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000079
Physical Location & Seq
Reverse (-)
64705227 .. 64706905
1679 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G036830.1

Sequence Viewer

Length: 1194 bp
ATGGGATCGATGGCAAAGGCTGAAGGAATAAACCAAGATAGGATCACACAATTACCAGATGACATTGTTTCCCACATATTCTCCTTCCTTCCTAAAGTAGATGCTGTCAGGAACACCCTTTTGTCGAAAAAATTTAACCAAGTGTGGACGAAGCTTAAAACTCTAGACTTCGACAGTGAAAGGGAATTTCGGAAGTGTAGAGGTGGAAATGCTTTTCTAACGTTTGTATCTCGTGTGCTCTACTTTCGTGATGGATCAGAGATACGTACATTCCGTCTAAAACTGTCTCGTAAACGTTATTTACCATGTGTTGGGGATTGGATTTGCGCTGCTGTTAAGCGTAAAGTAGTTGAGCTTGATCTCCATCTAAACTTTGATGTATGGACTGATTTCGAGTTGCATCCGTGCATTTTTTGGTGCAAAACACTTGAGGTTTTGAAACTGAATCTGTCGCCTTGGGAGGTCACCGGTGATATTCCTACATCAGGCTGTTTCCCAATTCTCAAGTTCCTCCATGTTACAGTGTTTAATCCTTCCATCCGGGAAATGGAGAAGCTTTTGTCTCACTTCCCTGTACTTGAAGAGTTGACTATAGATGGAACTGGTGAAGATCTTGATGACTTTGGTACTTGCAGTTTCCAGGTCTCTGCACCGAAACTGAAGACGCTGAGAATAAGTTTGGAATCCCTATCTGAGCCTGTCGATATTCATGTAAATGCCCCACAGCTTGAAAGCCTTGATCTCCAGCGGCTTGGTTTAACTAATTGTTTTCTTGATGGGAGTGCAAACTCCCTAGTCAATGCCAGTATTGCTTTCAGAGAAAAATTTGAAATAAAAGGACCGTTTGATCTTTCCAACTCTACATTAATGGAGCTTCTGAATCAAGTCTCTGATGTCAAATCTCTATCTGTTTCGGCTCATTGCTTGGAGAATTACTATCTCCCTTCTTTTGGTAATGTGAACCAATTGAGGCTGGCTTTTGGGGATCACAGTTGCTGGGAATTGCTAGCTCGGTTTCTCAACAGTGCACCTAATCTTGAAATTCTTGTCTTAGACGATAGAACTGAAGGTCACAAAGAACCGTCAGAGATTCACTGGAATCCACCGGAGCAAGTGCCTAGTAGTTTATTATCAAACCTGAAGACTATCTGCTTTAAGGGGTTCAAGGGAAGGCTGTTTGAGATGGAAATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

397

Amino Acids

45.21

Weight (kDa)

5.75

Isoelectric Point (pI)

29.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At5g56370 PF24758 106 - 349 8.7e-13 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 311
AciI CCGC 1 cut(s) 748
AclI AACGTT 2 cut(s) 221, 295
AclWI GGATC 4 cut(s) 13, 50, 262, 993
AcsI RAATTY 4 cut(s) 131, 185, 824, 1041
AcuI CTGAAG 4 cut(s) 42, 680, 1086, 1160
AfaI GTAC 3 cut(s) 268, 576, 628
AfiI CCNNNNNNNGG 4 cut(s) 311, 485, 547, 950
AgeI ACCGGT 1 cut(s) 467
AgsI TTSAA 6 cut(s) 439, 581, 731, 830, 1040, 1165
AjnI CCWGG 1 cut(s) 639
AluBI AGCT 6 cut(s) 154, 355, 556, 727, 874, 1010
AluI AGCT 6 cut(s) 154, 355, 556, 727, 874, 1010
Alw21I GWGCWC 2 cut(s) 240, 1030
Alw26I GTCTC 4 cut(s) 291, 567, 649, 892
Alw44I GTGCAC 1 cut(s) 1026
AlwI GGATC 4 cut(s) 13, 50, 262, 993
AlwNI CAGNNNCTG 1 cut(s) 996
ApaLI GTGCAC 1 cut(s) 1026
ApeKI GCWGC 1 cut(s) 329
ApoI RAATTY 4 cut(s) 131, 185, 824, 1041
AseI ATTAAT 1 cut(s) 866
AsiGI ACCGGT 1 cut(s) 467
AspLEI GCGC 1 cut(s) 329
AspS9I GGNCC 1 cut(s) 839
AsuC2I CCSGG 1 cut(s) 542
AsuHPI GGTGA 3 cut(s) 457, 482, 617
AsuNHI GCTAGC 1 cut(s) 1006
AvaII GGWCC 1 cut(s) 839
BaeGI GKGCMC 1 cut(s) 1030
BaeI ACNNNNGTAYC 2 cut(s) 210, 243
BauI CACGAG 1 cut(s) 231
BbsI GAAGAC 2 cut(s) 668, 1148
Bbv12I GWGCWC 2 cut(s) 240, 1030
BbvI GCAGC 1 cut(s) 316
BccI CCATC 7 cut(s) 4, 245, 372, 545, 590, 770, 1177
BciT130I CCWGG 1 cut(s) 641
BcnI CCSGG 1 cut(s) 542
BcoDI GTCTC 4 cut(s) 291, 567, 649, 892
BfaI CTAG 4 cut(s) 164, 794, 1007, 1119
BfmI CTRYAG 1 cut(s) 591
BglII AGATCT 1 cut(s) 610
BisI GCNGC 2 cut(s) 330, 749
BlsI GCNGC 2 cut(s) 331, 750
Bme1390I CCNGG 2 cut(s) 542, 641
Bme18I GGWCC 1 cut(s) 839
BmgT120I GGNCC 1 cut(s) 839
BmrFI CCNGG 2 cut(s) 542, 641
BmsI GCATC 2 cut(s) 91, 409
BmtI GCTAGC 1 cut(s) 1010
BpiI GAAGAC 2 cut(s) 668, 1148
BpmI CTGGAG 1 cut(s) 728
BpuEI CTTGAG 2 cut(s) 449, 488
BpuMI CCSGG 1 cut(s) 542
Bsa29I ATCGAT 1 cut(s) 8
BsaAI YACGTR 1 cut(s) 266
BsaBI GATNNNNATC 1 cut(s) 363
BsaI GGTCTC 1 cut(s) 649
BsaJI CCNNGG 1 cut(s) 455
BsaWI WCCGGW 2 cut(s) 467, 1105
BsaXI ACNNNNNCTCC 2 cut(s) 65, 95
Bsc4I CCNNNNNNNGG 4 cut(s) 311, 485, 547, 950
Bse118I RCCGGY 1 cut(s) 467
Bse1I ACTGG 3 cut(s) 607, 804, 1100
Bse3DI GCAATG 1 cut(s) 919
Bse8I GATNNNNATC 1 cut(s) 363
BseBI CCWGG 1 cut(s) 641
BseCI ATCGAT 1 cut(s) 8
BseDI CCNNGG 1 cut(s) 455
BseGI GGATG 2 cut(s) 400, 537
BseJI GATNNNNATC 1 cut(s) 363
BseLI CCNNNNNNNGG 4 cut(s) 311, 485, 547, 950
BseMI GCAATG 1 cut(s) 919
BseMII CTCAG 2 cut(s) 659, 684
BseNI ACTGG 3 cut(s) 607, 804, 1100
BseSI GKGCMC 1 cut(s) 1030
BseXI GCAGC 1 cut(s) 316
BseYI CCCAGC 1 cut(s) 996
BsgI GTGCAG 1 cut(s) 633
BshTI ACCGGT 1 cut(s) 467
BshVI ATCGAT 1 cut(s) 8
BsiHKAI GWGCWC 2 cut(s) 240, 1030
BsiSI CCGG 3 cut(s) 468, 541, 1106
BslI CCNNNNNNNGG 4 cut(s) 311, 485, 547, 950
BsmAI GTCTC 4 cut(s) 291, 567, 649, 892
Bso31I GGTCTC 1 cut(s) 649
Bsp1286I GDGCHC 2 cut(s) 240, 1030
Bsp143I GATC 8 cut(s) 5, 42, 254, 358, 610, 739, 847, 985
BspACI CCGC 1 cut(s) 748
BspCNI CTCAG 2 cut(s) 660, 685
BspDI ATCGAT 1 cut(s) 8
BspOI GCTAGC 1 cut(s) 1010
BspPI GGATC 4 cut(s) 13, 50, 262, 993
BspTNI GGTCTC 1 cut(s) 649
BsrDI GCAATG 1 cut(s) 919
BsrFI RCCGGY 1 cut(s) 467
BsrI ACTGG 3 cut(s) 607, 804, 1100
BssAI RCCGGY 1 cut(s) 467
BssECI CCNNGG 1 cut(s) 455
BssMI GATC 8 cut(s) 5, 42, 254, 358, 610, 739, 847, 985
BssSI CACGAG 1 cut(s) 231
BssT1I CCWWGG 1 cut(s) 455
Bst2BI CACGAG 1 cut(s) 231
Bst2UI CCWGG 1 cut(s) 641
Bst4CI ACNGT 7 cut(s) 176, 285, 523, 843, 992, 1025, 1083
Bst6I CTCTTC 1 cut(s) 576
BstBAI YACGTR 1 cut(s) 266
BstC8I GCNNGC 2 cut(s) 975, 1008
BstDEI CTNAG 3 cut(s) 668, 693, 1051
BstEII GGTNACC 1 cut(s) 463
BstENI CCTNNNNNAGG 1 cut(s) 483
BstF5I GGATG 2 cut(s) 400, 537
BstHHI GCGC 1 cut(s) 329
BstKTI GATC 8 cut(s) 8, 45, 257, 361, 613, 742, 850, 988
BstMAI GTCTC 4 cut(s) 291, 567, 649, 892
BstMBI GATC 8 cut(s) 5, 42, 254, 358, 610, 739, 847, 985
BstMWI GCNNNNNNNGC 1 cut(s) 809
BstNI CCWGG 1 cut(s) 641
BstPI GGTNACC 1 cut(s) 463
BstSCI CCNGG 2 cut(s) 540, 639
BstSFI CTRYAG 1 cut(s) 591
BstSLI GKGCMC 1 cut(s) 1030
BstSNI TACGTA 1 cut(s) 266
BstV1I GCAGC 1 cut(s) 316
BstV2I GAAGAC 2 cut(s) 668, 1148
BstX2I RGATCY 1 cut(s) 610
BstXI CCANNNNNNTGG 1 cut(s) 752
BstYI RGATCY 1 cut(s) 610
Bsu15I ATCGAT 1 cut(s) 8
BsuTUI ATCGAT 1 cut(s) 8
BtsCI GGATG 2 cut(s) 400, 537
BtsIMutI CAGTG 4 cut(s) 181, 528, 1030, 1093
Cac8I GCNNGC 2 cut(s) 975, 1008
CaiI CAGNNNCTG 1 cut(s) 996
CfoI GCGC 1 cut(s) 329
Cfr10I RCCGGY 1 cut(s) 467
Cfr13I GGNCC 1 cut(s) 839
ClaI ATCGAT 1 cut(s) 8
CseI GACGC 1 cut(s) 673
Csp6I GTAC 3 cut(s) 267, 575, 627
CspAI ACCGGT 1 cut(s) 467
CviAII CATG 3 cut(s) 306, 515, 710
CviQI GTAC 3 cut(s) 267, 575, 627
DdeI CTNAG 3 cut(s) 668, 693, 1051
DpnI GATC 8 cut(s) 7, 44, 256, 360, 612, 741, 849, 987
DpnII GATC 8 cut(s) 5, 42, 254, 358, 610, 739, 847, 985
Eam1104I CTCTTC 1 cut(s) 576
EarI CTCTTC 1 cut(s) 576
Eco105I TACGTA 1 cut(s) 266
Eco130I CCWWGG 1 cut(s) 455
Eco31I GGTCTC 1 cut(s) 649
Eco47I GGWCC 1 cut(s) 839
Eco57I CTGAAG 4 cut(s) 42, 680, 1086, 1160
Eco91I GGTNACC 1 cut(s) 463
EcoNI CCTNNNNNAGG 1 cut(s) 483
EcoO65I GGTNACC 1 cut(s) 463
EcoRII CCWGG 1 cut(s) 639
EcoT14I CCWWGG 1 cut(s) 455
ErhI CCWWGG 1 cut(s) 455
FaeI CATG 3 cut(s) 309, 518, 713
FaiI YATR 7 cut(s) 77, 307, 382, 516, 593, 711, 1192
FatI CATG 3 cut(s) 305, 514, 709
Fnu4HI GCNGC 2 cut(s) 330, 749
FokI GGATG 2 cut(s) 387, 524
Fsp4HI GCNGC 2 cut(s) 330, 749
FspBI CTAG 4 cut(s) 164, 794, 1007, 1119
GlaI GCGC 1 cut(s) 328
GluI GCNGC 2 cut(s) 330, 749
GsaI CCCAGC 1 cut(s) 1000
GsuI CTGGAG 1 cut(s) 728
HapII CCGG 3 cut(s) 468, 541, 1106
HgaI GACGC 1 cut(s) 673
HhaI GCGC 1 cut(s) 329
Hin1II CATG 3 cut(s) 309, 518, 713
Hin6I GCGC 1 cut(s) 327
HinP1I GCGC 1 cut(s) 327
HincII GTYRAC 1 cut(s) 588
HindII GTYRAC 1 cut(s) 588
HindIII AAGCTT 2 cut(s) 152, 554
HinfI GANTC 5 cut(s) 445, 683, 880, 1090, 1099
HpaII CCGG 3 cut(s) 468, 541, 1106
HphI GGTGA 3 cut(s) 457, 482, 617
Hpy166II GTNNAC 5 cut(s) 147, 293, 588, 961, 1028
Hpy188I TCNGA 7 cut(s) 192, 259, 694, 818, 879, 892, 1087
Hpy188III TCNNGA 6 cut(s) 109, 164, 248, 614, 773, 1037
Hpy8I GTNNAC 5 cut(s) 147, 293, 588, 961, 1028
HpyAV CCTTC 7 cut(s) 17, 94, 98, 543, 954, 1061, 1164
HpyCH4III ACNGT 7 cut(s) 176, 285, 523, 843, 992, 1025, 1083
HpyCH4IV ACGT 3 cut(s) 221, 265, 295
HpyCH4V TGCA 7 cut(s) 400, 408, 420, 633, 650, 785, 1028
HpyF10VI GCNNNNNNNGC 1 cut(s) 809
HpyF3I CTNAG 3 cut(s) 668, 693, 1051
HpySE526I ACGT 3 cut(s) 221, 265, 295
Hsp92II CATG 3 cut(s) 309, 518, 713
HspAI GCGC 1 cut(s) 327
Kzo9I GATC 8 cut(s) 5, 42, 254, 358, 610, 739, 847, 985
LmnI GCTCC 2 cut(s) 871, 1108
Lsp1109I GCAGC 1 cut(s) 316
LweI GCATC 2 cut(s) 91, 409
MaeI CTAG 4 cut(s) 164, 794, 1007, 1119
MaeII ACGT 3 cut(s) 221, 265, 295
MaeIII GTNAC 3 cut(s) 463, 517, 1070
MalI GATC 8 cut(s) 7, 44, 256, 360, 612, 741, 849, 987
MboI GATC 8 cut(s) 5, 42, 254, 358, 610, 739, 847, 985
MboII GAAGA 4 cut(s) 593, 620, 673, 1153
MfeI CAATTG 1 cut(s) 965
MflI RGATCY 1 cut(s) 610
MhlI GDGCHC 2 cut(s) 240, 1030
MmeI TCCRAC 1 cut(s) 879
MnlI CCTC 5 cut(s) 194, 424, 454, 521, 963
MseI TTAA 7 cut(s) 135, 156, 336, 528, 758, 866, 1155
MslI CAYNNNNRTG 1 cut(s) 714
MspA1I CMGCKG 1 cut(s) 748
MspI CCGG 3 cut(s) 468, 541, 1106
MspR9I CCNGG 2 cut(s) 542, 641
MunI CAATTG 1 cut(s) 965
MvaI CCWGG 1 cut(s) 641
MwoI GCNNNNNNNGC 1 cut(s) 809
NciI CCSGG 1 cut(s) 542
NdeII GATC 8 cut(s) 5, 42, 254, 358, 610, 739, 847, 985
NheI GCTAGC 1 cut(s) 1006
NlaIII CATG 3 cut(s) 309, 518, 713
NmuCI GTSAC 2 cut(s) 463, 1070
PcsI WCGNNNNNNNCGW 1 cut(s) 271
PfeI GAWTC 5 cut(s) 445, 683, 880, 1090, 1099
PflMI CCANNNNNTGG 1 cut(s) 311
PfoI TCCNGGA 1 cut(s) 540
PinAI ACCGGT 1 cut(s) 467
PkrI GCNGC 2 cut(s) 331, 750
Ppu21I YACGTR 1 cut(s) 266
PshBI ATTAAT 1 cut(s) 866
Psp1406I AACGTT 2 cut(s) 221, 295
Psp6I CCWGG 1 cut(s) 639
PspEI GGTNACC 1 cut(s) 463
PspFI CCCAGC 1 cut(s) 996
PspGI CCWGG 1 cut(s) 639
PspPI GGNCC 1 cut(s) 839
PstNI CAGNNNCTG 1 cut(s) 996
PsuI RGATCY 1 cut(s) 610
RsaI GTAC 3 cut(s) 268, 576, 628
RsaNI GTAC 3 cut(s) 267, 575, 627
RseI CAYNNNNRTG 1 cut(s) 714
SaqAI TTAA 7 cut(s) 135, 156, 336, 528, 758, 866, 1155
SatI GCNGC 2 cut(s) 330, 749
Sau3AI GATC 8 cut(s) 5, 42, 254, 358, 610, 739, 847, 985
Sau96I GGNCC 1 cut(s) 839
ScrFI CCNGG 2 cut(s) 542, 641
SduI GDGCHC 2 cut(s) 240, 1030
SfaNI GCATC 2 cut(s) 91, 409
SfcI CTRYAG 1 cut(s) 591
SgrAI CRCCGGYG 1 cut(s) 467
SinI GGWCC 1 cut(s) 839
SmiMI CAYNNNNRTG 1 cut(s) 714
SmlI CTYRAG 2 cut(s) 428, 503
SmoI CTYRAG 2 cut(s) 428, 503
SnaBI TACGTA 1 cut(s) 266
SsiI CCGC 1 cut(s) 748
SspMI CTAG 4 cut(s) 164, 794, 1007, 1119
StyD4I CCNGG 2 cut(s) 540, 639
StyI CCWWGG 1 cut(s) 455
TaaI ACNGT 7 cut(s) 176, 285, 523, 843, 992, 1025, 1083
TaiI ACGT 3 cut(s) 224, 268, 298
TaqI TCGA 5 cut(s) 8, 125, 171, 393, 702
TatI WGTACW 1 cut(s) 574
TauI GCSGC 1 cut(s) 751
TfiI GAWTC 5 cut(s) 445, 683, 880, 1090, 1099
Tru1I TTAA 7 cut(s) 135, 156, 336, 528, 758, 866, 1155
Tru9I TTAA 7 cut(s) 135, 156, 336, 528, 758, 866, 1155
TscAI CASTG 4 cut(s) 181, 528, 1030, 1100
TseFI GTSAC 2 cut(s) 463, 1070
TseI GCWGC 1 cut(s) 329
Tsp45I GTSAC 2 cut(s) 463, 1070
TspDTI ATGAA 1 cut(s) 698
TspGWI ACGGA 2 cut(s) 263, 393
TspRI CASTG 4 cut(s) 181, 528, 1030, 1100
Van91I CCANNNNNTGG 1 cut(s) 311
VneI GTGCAC 1 cut(s) 1026
VpaK11BI GGWCC 1 cut(s) 839
VspI ATTAAT 1 cut(s) 866
XagI CCTNNNNNAGG 1 cut(s) 483
XapI RAATTY 4 cut(s) 131, 185, 824, 1041
XbaI TCTAGA 1 cut(s) 163
XcmI CCANNNNNNNNNTGG 1 cut(s) 544
XspI CTAG 4 cut(s) 164, 794, 1007, 1119
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.