Prupe.4G161300_v2.0.a1

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000079
Physical Location & Seq
Reverse (-)
9240981 .. 9242891
1911 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G161300.1

Sequence Viewer

Length: 1437 bp
ATGGGATCGAACTCAAGATGTTGTAAACCATGCATAGGAGATAGGATCAGTGGATTGCCAGATGCAATTCTTAGCCACATTCTTTCTTTTCTTACAACAGAAGATGCTGTGAAGACCAGCGTTTTGTCACATAGATGGTTCGATGTGTGGACTTCTGTTCCCAAGATAAACTTAACTCTTGGTTCACAGGCAGCATTTGAACCTTTTGCGCAGTTTGTGGACTGTGTACTTTTCTTTCGTGGCTCATCAAACATTCATACCTTCCAGCTTCGTTGTTCTGTAATCGAGGAGGATTTTTGTCGTATTGATCCCTGGATTTACACTGCTGTTAGGCGTAATGTTGTCGAATTTGAATTTGACCTCGATGTGGATGTGGACTCAAAGTCACACAGATACGAGGGTTATGAGTTGCCTAGAAGGCTTTTGATGTGCAACACATTGGAGGTTTTGAAGCTGACTCTGAATCATAAAGATATTATCATCAATCCTCCCTCTGATTGTTTCCCAAGTCTTAAGTTCCTCCATGTTACACTCCAGTATCCTGGTGGTCACTCATTGGAGAAACTCCTCACTTGCTGCCCCGTACTCGAAGATTTGATTATAGAGGGACACCTTAAAGATGATTCAGTTGTGAATATTAATGTCTCTGCACCTAAACTAAAAAGACTTCGAATGCGTTTGTCCATGGATCTAGTCCGTTGGGATGAAGGTGATTACAAAATGTTAGAATACAAGTGCAAAAGAATTTACATTAATGCTGATGCTCCGAATCTTGAAGAGTTCAATCTCCGGGATAATTTCTTGGCGAGCTATTCTTTGAACAATGCAAAATCCCTAAGCAAAGCCATGATTGATTTGGGGCGCCTGTATACATTAGAGGACCCTGACTTTGCCCGTGACTCTGCCGATCGTATGCATAGGCTTTTTGCAGGAATTCACAATGTTACATATTTATCACTTTCATCTCCAGTTTATGGGGATCTTTTCACTCGAGATCGATATCATCTACCTACATTTAATATTCTGAACTGCTTGGAGCTACATCTTGAACCCTGCTTCTCGTGGCAGTTTTTGACAAAGTTGCTAAATATATCACCCAATCTGGAATATCTTGTCTTCGCAATTCACATCAGCTACACTGCGAAACTGGAAAACCGTGAGAGTGAGTTTGCAGTTGGTCAATGGAGTCAGCCAGATTTTGTGCCTATCTGTTTGTTGTCAAGCCTCAAGAAAATTTGCATACAGGGATTCCATGCGTGGCCAGATGACATAGAAGTGGTGAAGTACTTATTGAAGCACGGTGAAGTATTGAATACGGTGAAAATTTGTCCTTCTTACTTTCATTCAGAAGAAGAAATGAAGCTAAGGCAGAAACTGTCAATGTTCCCAAAGGGTTCAAGGACTTGTCAAATTGAAGTTATGAAAATCAAGTCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

479

Amino Acids

55.16

Weight (kDa)

6.25

Isoelectric Point (pI)

43.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 210
AccB1I GGYRCC 1 cut(s) 861
AccB7I CCANNNNNTGG 1 cut(s) 974
AccI GTMKAC 1 cut(s) 869
AclWI GGATC 5 cut(s) 13, 53, 302, 696, 987
AcoI YGGCCR 1 cut(s) 1259
AcsI RAATTY 6 cut(s) 347, 353, 744, 933, 1233, 1323
AcyI GRCGYC 1 cut(s) 862
AfaI GTAC 3 cut(s) 228, 585, 1286
AfiI CCNNNNNNNGG 3 cut(s) 35, 367, 974
AflII CTTAAG 1 cut(s) 512
AhdI GACNNNNNGTC 1 cut(s) 382
AjnI CCWGG 2 cut(s) 311, 541
AluBI AGCT 6 cut(s) 268, 454, 810, 1039, 1134, 1363
AluI AGCT 6 cut(s) 268, 454, 810, 1039, 1134, 1363
Alw26I GTCTC 1 cut(s) 649
AlwI GGATC 5 cut(s) 13, 53, 302, 696, 987
AlwNI CAGNNNCTG 1 cut(s) 1375
Ama87I CYCGRG 1 cut(s) 990
AoxI GGCC 1 cut(s) 1259
ApeKI GCWGC 2 cut(s) 191, 576
ApoI RAATTY 6 cut(s) 347, 353, 744, 933, 1233, 1323
ArsI GACNNNNNNTTYG 4 cut(s) 106, 138, 872, 904
AseI ATTAAT 2 cut(s) 639, 753
AspLEI GCGC 2 cut(s) 211, 864
AspS9I GGNCC 1 cut(s) 880
AsuC2I CCSGG 1 cut(s) 791
AsuHPI GGTGA 5 cut(s) 722, 1086, 1291, 1313, 1330
AsuII TTCGAA 1 cut(s) 670
AvaI CYCGRG 1 cut(s) 990
AvaII GGWCC 1 cut(s) 880
BaeI ACNNNNGTAYC 4 cut(s) 385, 418, 521, 554
BalI TGGCCA 1 cut(s) 1261
BanI GGYRCC 1 cut(s) 861
BauI CACGAG 1 cut(s) 1060
BbsI GAAGAC 2 cut(s) 119, 1108
BbvI GCAGC 2 cut(s) 203, 563
BccI CCATC 1 cut(s) 129
BciT130I CCWGG 2 cut(s) 313, 543
BciVI GTATCC 1 cut(s) 549
BcnI CCSGG 1 cut(s) 791
BcoDI GTCTC 1 cut(s) 649
BfaI CTAG 3 cut(s) 414, 692, 1435
BfoI RGCGCY 1 cut(s) 865
BfrI CTTAAG 1 cut(s) 512
BfuI GTATCC 1 cut(s) 549
BglI GCCNNNNNGGC 1 cut(s) 418
BisI GCNGC 2 cut(s) 192, 577
BlsI GCNGC 2 cut(s) 193, 578
BmcAI AGTACT 1 cut(s) 1286
Bme1390I CCNGG 3 cut(s) 313, 543, 791
Bme18I GGWCC 1 cut(s) 880
BmeRI GACNNNNNGTC 1 cut(s) 382
BmeT110I CYCGRG 1 cut(s) 990
BmgT120I GGNCC 1 cut(s) 880
BmiI GGNNCC 2 cut(s) 863, 882
BmrFI CCNGG 3 cut(s) 313, 543, 791
BmsI GCATC 3 cut(s) 52, 94, 751
BpiI GAAGAC 2 cut(s) 119, 1108
BpmI CTGGAG 2 cut(s) 518, 951
Bpu10I CCTNAGC 2 cut(s) 836, 1364
Bpu14I TTCGAA 1 cut(s) 670
BpuEI CTTGAG 1 cut(s) 1211
BpuMI CCSGG 1 cut(s) 791
Bsa29I ATCGAT 1 cut(s) 997
BsaBI GATNNNNATC 1 cut(s) 999
BsaHI GRCGYC 1 cut(s) 862
BsaJI CCNNGG 2 cut(s) 311, 684
Bsc4I CCNNNNNNNGG 3 cut(s) 35, 367, 974
Bse1I ACTGG 3 cut(s) 535, 968, 1152
Bse8I GATNNNNATC 1 cut(s) 999
BseBI CCWGG 2 cut(s) 313, 543
BseCI ATCGAT 1 cut(s) 997
BseDI CCNNGG 2 cut(s) 311, 684
BseGI GGATG 2 cut(s) 376, 709
BseJI GATNNNNATC 1 cut(s) 999
BseLI CCNNNNNNNGG 3 cut(s) 35, 367, 974
BseNI ACTGG 3 cut(s) 535, 968, 1152
BseRI GAGGAG 2 cut(s) 302, 557
BseXI GCAGC 2 cut(s) 203, 563
BsgI GTGCAG 1 cut(s) 633
Bsh1285I CGRYCG 1 cut(s) 910
BshFI GGCC 1 cut(s) 1261
BshNI GGYRCC 1 cut(s) 861
BshVI ATCGAT 1 cut(s) 997
BsiEI CGRYCG 1 cut(s) 910
BsiHKCI CYCGRG 1 cut(s) 990
BsiSI CCGG 1 cut(s) 790
BslFI GGGAC 1 cut(s) 621
BslI CCNNNNNNNGG 3 cut(s) 35, 367, 974
BsmAI GTCTC 1 cut(s) 649
BsmFI GGGAC 1 cut(s) 621
BsmI GAATGC 1 cut(s) 678
BsnI GGCC 1 cut(s) 1261
BsoBI CYCGRG 1 cut(s) 990
Bsp119I TTCGAA 1 cut(s) 670
Bsp143I GATC 7 cut(s) 5, 45, 307, 688, 907, 979, 994
Bsp19I CCATGG 1 cut(s) 684
BspANI GGCC 1 cut(s) 1261
BspDI ATCGAT 1 cut(s) 997
BspLI GGNNCC 2 cut(s) 863, 882
BspPI GGATC 5 cut(s) 13, 53, 302, 696, 987
BspT104I TTCGAA 1 cut(s) 670
BspT107I GGYRCC 1 cut(s) 861
BspTI CTTAAG 1 cut(s) 512
BsrI ACTGG 3 cut(s) 535, 968, 1152
BssECI CCNNGG 2 cut(s) 311, 684
BssMI GATC 7 cut(s) 5, 45, 307, 688, 907, 979, 994
BssNAI GTATAC 1 cut(s) 870
BssNI GRCGYC 1 cut(s) 862
BssSI CACGAG 1 cut(s) 1060
BssT1I CCWWGG 1 cut(s) 684
Bst1107I GTATAC 1 cut(s) 870
Bst2BI CACGAG 1 cut(s) 1060
Bst2UI CCWGG 2 cut(s) 313, 543
Bst4CI ACNGT 5 cut(s) 224, 1157, 1301, 1318, 1377
Bst6I CTCTTC 1 cut(s) 771
BstACI GRCGYC 1 cut(s) 862
BstAFI CTTAAG 1 cut(s) 512
BstBI TTCGAA 1 cut(s) 670
BstC8I GCNNGC 1 cut(s) 808
BstDEI CTNAG 3 cut(s) 71, 836, 1364
BstDSI CCRYGG 1 cut(s) 684
BstF5I GGATG 2 cut(s) 376, 709
BstH2I RGCGCY 1 cut(s) 865
BstHHI GCGC 2 cut(s) 211, 864
BstKTI GATC 7 cut(s) 8, 48, 310, 691, 910, 982, 997
BstMAI GTCTC 1 cut(s) 649
BstMBI GATC 7 cut(s) 5, 45, 307, 688, 907, 979, 994
BstMCI CGRYCG 1 cut(s) 910
BstMWI GCNNNNNNNGC 1 cut(s) 418
BstNI CCWGG 2 cut(s) 313, 543
BstSCI CCNGG 3 cut(s) 311, 541, 789
BstV1I GCAGC 2 cut(s) 203, 563
BstV2I GAAGAC 2 cut(s) 119, 1108
BstX2I RGATCY 2 cut(s) 688, 979
BstXI CCANNNNNNTGG 1 cut(s) 542
BstYI RGATCY 2 cut(s) 688, 979
BstZ17I GTATAC 1 cut(s) 870
Bsu15I ATCGAT 1 cut(s) 997
BsuI GTATCC 1 cut(s) 549
BsuRI GGCC 1 cut(s) 1261
BsuTUI ATCGAT 1 cut(s) 997
BtgI CCRYGG 1 cut(s) 684
BtsCI GGATG 2 cut(s) 376, 709
BtsI GCAGTG 2 cut(s) 321, 1137
BtsIMutI CAGTG 3 cut(s) 55, 321, 1137
Cac8I GCNNGC 1 cut(s) 808
CaiI CAGNNNCTG 1 cut(s) 1375
CfoI GCGC 2 cut(s) 211, 864
Cfr13I GGNCC 1 cut(s) 880
ClaI ATCGAT 1 cut(s) 997
Csp6I GTAC 3 cut(s) 227, 584, 1285
CviAII CATG 5 cut(s) 30, 524, 685, 847, 1253
CviQI GTAC 3 cut(s) 227, 584, 1285
DdeI CTNAG 3 cut(s) 71, 836, 1364
DinI GGCGCC 1 cut(s) 863
DpnI GATC 7 cut(s) 7, 47, 309, 690, 909, 981, 996
DpnII GATC 7 cut(s) 5, 45, 307, 688, 907, 979, 994
DriI GACNNNNNGTC 1 cut(s) 382
EaeI YGGCCR 1 cut(s) 1259
Eam1104I CTCTTC 1 cut(s) 771
Eam1105I GACNNNNNGTC 1 cut(s) 382
EarI CTCTTC 1 cut(s) 771
Eco130I CCWWGG 1 cut(s) 684
Eco32I GATATC 1 cut(s) 1001
Eco47I GGWCC 1 cut(s) 880
Eco88I CYCGRG 1 cut(s) 990
EcoO109I RGGNCCY 1 cut(s) 880
EcoRI GAATTC 1 cut(s) 933
EcoRII CCWGG 2 cut(s) 311, 541
EcoRV GATATC 1 cut(s) 1001
EcoT14I CCWWGG 1 cut(s) 684
EcoT22I ATGCAT 2 cut(s) 35, 918
EgeI GGCGCC 1 cut(s) 863
EheI GGCGCC 1 cut(s) 863
ErhI CCWWGG 1 cut(s) 684
FaeI CATG 5 cut(s) 33, 527, 688, 850, 1256
FalI AAGNNNNNCTT 2 cut(s) 155, 187
FaqI GGGAC 1 cut(s) 621
FatI CATG 5 cut(s) 29, 523, 684, 846, 1252
FblI GTMKAC 1 cut(s) 869
Fnu4HI GCNGC 2 cut(s) 192, 577
FokI GGATG 2 cut(s) 383, 716
Fsp4HI GCNGC 2 cut(s) 192, 577
FspBI CTAG 3 cut(s) 414, 692, 1435
FspI TGCGCA 1 cut(s) 210
GlaI GCGC 2 cut(s) 210, 863
GluI GCNGC 2 cut(s) 192, 577
GsuI CTGGAG 2 cut(s) 518, 951
HaeII RGCGCY 1 cut(s) 865
HaeIII GGCC 1 cut(s) 1261
HapII CCGG 1 cut(s) 790
HhaI GCGC 2 cut(s) 211, 864
Hin1I GRCGYC 1 cut(s) 862
Hin1II CATG 5 cut(s) 33, 527, 688, 850, 1256
Hin6I GCGC 2 cut(s) 209, 862
HinP1I GCGC 2 cut(s) 209, 862
HinfI GANTC 8 cut(s) 377, 457, 463, 623, 769, 899, 1186, 1248
HpaII CCGG 1 cut(s) 790
HphI GGTGA 5 cut(s) 722, 1086, 1291, 1313, 1330
Hpy166II GTNNAC 7 cut(s) 26, 150, 185, 220, 227, 376, 870
Hpy188I TCNGA 5 cut(s) 462, 496, 768, 1026, 1348
Hpy188III TCNNGA 6 cut(s) 15, 773, 992, 1046, 1103, 1228
Hpy8I GTNNAC 7 cut(s) 26, 150, 185, 220, 227, 376, 870
HpyAV CCTTC 4 cut(s) 271, 411, 701, 1341
HpyCH4III ACNGT 5 cut(s) 224, 1157, 1301, 1318, 1377
HpyF10VI GCNNNNNNNGC 1 cut(s) 418
HpyF3I CTNAG 3 cut(s) 71, 836, 1364
Hsp92I GRCGYC 1 cut(s) 862
Hsp92II CATG 5 cut(s) 33, 527, 688, 850, 1256
HspAI GCGC 2 cut(s) 209, 862
KasI GGCGCC 1 cut(s) 861
Kzo9I GATC 7 cut(s) 5, 45, 307, 688, 907, 979, 994
LmnI GCTCC 2 cut(s) 769, 1036
Lsp1109I GCAGC 2 cut(s) 203, 563
LweI GCATC 3 cut(s) 52, 94, 751
MaeI CTAG 3 cut(s) 414, 692, 1435
MaeIII GTNAC 6 cut(s) 126, 384, 526, 548, 896, 943
MalI GATC 7 cut(s) 7, 47, 309, 690, 909, 981, 996
MboI GATC 7 cut(s) 5, 45, 307, 688, 907, 979, 994
MboII GAAGA 7 cut(s) 113, 124, 602, 788, 1108, 1361, 1364
MflI RGATCY 2 cut(s) 688, 979
MlsI TGGCCA 1 cut(s) 1261
MluNI TGGCCA 1 cut(s) 1261
Mly113I GGCGCC 1 cut(s) 862
MlyI GAGTC 4 cut(s) 371, 451, 893, 1195
Mox20I TGGCCA 1 cut(s) 1261
Mph1103I ATGCAT 2 cut(s) 35, 918
MscI TGGCCA 1 cut(s) 1261
MseI TTAA 6 cut(s) 173, 513, 615, 639, 753, 1017
MslI CAYNNNNRTG 2 cut(s) 133, 1274
Msp20I TGGCCA 1 cut(s) 1261
MspCI CTTAAG 1 cut(s) 512
MspI CCGG 1 cut(s) 790
MspR9I CCNGG 3 cut(s) 313, 543, 791
Mva1269I GAATGC 1 cut(s) 678
MvaI CCWGG 2 cut(s) 313, 543
MwoI GCNNNNNNNGC 1 cut(s) 418
NarI GGCGCC 1 cut(s) 862
NciI CCSGG 1 cut(s) 791
NcoI CCATGG 1 cut(s) 684
NdeII GATC 7 cut(s) 5, 45, 307, 688, 907, 979, 994
NlaIII CATG 5 cut(s) 33, 527, 688, 850, 1256
NlaIV GGNNCC 2 cut(s) 863, 882
NmuCI GTSAC 4 cut(s) 126, 384, 548, 896
NsbI TGCGCA 1 cut(s) 210
NsiI ATGCAT 2 cut(s) 35, 918
NspV TTCGAA 1 cut(s) 670
PaeR7I CTCGAG 1 cut(s) 990
PctI GAATGC 1 cut(s) 678
PfeI GAWTC 4 cut(s) 463, 623, 769, 1248
PflMI CCANNNNNTGG 1 cut(s) 974
PfoI TCCNGGA 1 cut(s) 789
PkrI GCNGC 2 cut(s) 193, 578
Ple19I CGATCG 1 cut(s) 910
PleI GAGTC 4 cut(s) 371, 451, 893, 1194
PluTI GGCGCC 1 cut(s) 865
PpsI GAGTC 4 cut(s) 371, 451, 893, 1194
PpuMI RGGWCCY 1 cut(s) 880
PshBI ATTAAT 2 cut(s) 639, 753
Psp5II RGGWCCY 1 cut(s) 880
Psp6I CCWGG 2 cut(s) 311, 541
PspGI CCWGG 2 cut(s) 311, 541
PspN4I GGNNCC 2 cut(s) 863, 882
PspPI GGNCC 1 cut(s) 880
PspPPI RGGWCCY 1 cut(s) 880
PstNI CAGNNNCTG 1 cut(s) 1375
PsuI RGATCY 2 cut(s) 688, 979
PvuI CGATCG 1 cut(s) 910
RsaI GTAC 3 cut(s) 228, 585, 1286
RsaNI GTAC 3 cut(s) 227, 584, 1285
RseI CAYNNNNRTG 2 cut(s) 133, 1274
SaqAI TTAA 6 cut(s) 173, 513, 615, 639, 753, 1017
SatI GCNGC 2 cut(s) 192, 577
Sau3AI GATC 7 cut(s) 5, 45, 307, 688, 907, 979, 994
Sau96I GGNCC 1 cut(s) 880
ScaI AGTACT 1 cut(s) 1286
SchI GAGTC 4 cut(s) 371, 451, 893, 1195
ScrFI CCNGG 3 cut(s) 313, 543, 791
SfaNI GCATC 3 cut(s) 52, 94, 751
SfoI GGCGCC 1 cut(s) 863
Sfr274I CTCGAG 1 cut(s) 990
SfuI TTCGAA 1 cut(s) 670
SinI GGWCC 1 cut(s) 880
SlaI CTCGAG 1 cut(s) 990
SmiMI CAYNNNNRTG 2 cut(s) 133, 1274
SmlI CTYRAG 4 cut(s) 13, 512, 990, 1226
SmoI CTYRAG 4 cut(s) 13, 512, 990, 1226
SspDI GGCGCC 1 cut(s) 861
SspI AATATT 2 cut(s) 637, 1021
SspMI CTAG 3 cut(s) 414, 692, 1435
StyD4I CCNGG 3 cut(s) 311, 541, 789
StyI CCWWGG 1 cut(s) 684
TaaI ACNGT 5 cut(s) 224, 1157, 1301, 1318, 1377
TaqI TCGA 9 cut(s) 8, 141, 285, 345, 363, 588, 670, 991, 997
TatI WGTACW 2 cut(s) 226, 1284
TfiI GAWTC 4 cut(s) 463, 623, 769, 1248
Tru1I TTAA 6 cut(s) 173, 513, 615, 639, 753, 1017
Tru9I TTAA 6 cut(s) 173, 513, 615, 639, 753, 1017
TscAI CASTG 3 cut(s) 55, 328, 1144
TseFI GTSAC 4 cut(s) 126, 384, 548, 896
TseI GCWGC 2 cut(s) 191, 576
Tsp45I GTSAC 4 cut(s) 126, 384, 548, 896
TspDTI ATGAA 6 cut(s) 245, 720, 951, 1331, 1373, 1436
TspGWI ACGGA 1 cut(s) 686
TspRI CASTG 3 cut(s) 55, 328, 1144
Van91I CCANNNNNTGG 1 cut(s) 974
Vha464I CTTAAG 1 cut(s) 512
VpaK11BI GGWCC 1 cut(s) 880
VspI ATTAAT 2 cut(s) 639, 753
XapI RAATTY 6 cut(s) 347, 353, 744, 933, 1233, 1323
XcmI CCANNNNNNNNNTGG 2 cut(s) 542, 853
XhoI CTCGAG 1 cut(s) 990
XmiI GTMKAC 1 cut(s) 869
XspI CTAG 3 cut(s) 414, 692, 1435
ZrmI AGTACT 1 cut(s) 1286
Zsp2I ATGCAT 2 cut(s) 35, 918
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.