RchiOBHm_Chr5g0028201

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000079
Physical Location & Seq
Reverse (-)
22052596 .. 22055695
3100 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30768

Sequence Viewer

Length: 1296 bp
ATGTCAAAGAGTAAAGCAAGAGTTAAAGATAGGATTAGTGCATTACCTGATGAAGTTCTTTGTAAGGTTCTTTCCTGCCTTGATATACGATATGCTGTGAGGACCACCGTTTTGTCCCCGAGATGGAACAACCTATGGACCTCTCTTCCCAACTTATGCTTTTGCAATGATTATTTCATTGATGATGATGCTTTCATGACGTTTGTGGATCGTGTTCTTTTCTTTCGCGACTCCTCAGACATCAAAAAATTCTGTCTTGACTTCGACGAACCCAAGGAGGAAAATTTCTGTCGTATTGAAAGTTGGATATGTACAGCCATTAGGCGGAATGTTGTTGAACTTGATCTTTCTGTCAATTTATATCCAGACTATAAGACTTTTGAATTGCCTCGAAGTCTTTTCACTTGCAAAACACTAGAGGTGTTGAGCCTGAAGTCAAATTTTATTGCAAATCCTCCAAAATCTGGGTGTTTCCCAAGTCTCAAGGTACTCGAAGTTCTAGTTCGTTATCCTGACCTTGATAACTCGTCATTAGAACAGATTTTCGCTTACTGTCCTGTGCTCGAGGATTTGAGAATTGAAGGATCTCTTGGGGAGTGTTGTGATGTTTTGGATTTCAAAATCTCTGCACCTGAACTGAAAAGATTAACAATAGGATTGGACATTGACAGTTTTGATGATGAGAAGTATAATTTTTATATTAATGCTCCAAAACTAGAAGTCTTTAACCTCCCTGCGGGTGATTCGTCAGTGTTTTCATTTGAGATCAATGCAAAATCCCTCTTCAAAGCCAATATCAATCTTTCTAGCTGTTGTATACATTTTGACAGTACAAATGGACTTCTGGAAGCCATCTCCAATGTCAAACAGTTGTCTCTTTCAACTCGTAATTTGGAGGGTGGTGTACCTGCTTTTGATAATCTGAACCATTTGGAACTGATTCTTGGTGGTTCTACCTGTTGGCGATATCTAATAGAGTTTCTCAAGAGATCACCGAATCTAGAACATCTTGTTATCAAACATGATTGCGGATTCAAGCATGAGGACTTTACTCCTCTAGAGTTTGTGCCTGTTTGTATGTTGTCACATCTCAAGACTATTACCATAGCAAGCTTCAGGGGAAGTCAGGATAATATGAGAGTAGCTCAGTATTTGCTAAAGTACAGTGAAGTTTTGAATAAGATGATTTTTACCATTTCAGAAGGTCTTCCGAATGCAGAAGAGAAGGCATTGTACAAAGAATTTTTAATGTTCGAACGGGGTTCAAAGACTTGTCAAGTTGAAATATATAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

431

Amino Acids

49.38

Weight (kDa)

5.18

Isoelectric Point (pI)

45.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 12 - 52 7.4e-08 F-box domain
LRR_At1g61320_AtMIF1 PF23622 78 - 403 1.6e-17 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 100 - 241 2e-12 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 354 - 397 6.2e-11 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 916
AccB7I CCANNNNNTGG 1 cut(s) 464
AccI GTMKAC 1 cut(s) 817
AccII CGCG 1 cut(s) 228
AciI CCGC 3 cut(s) 325, 737, 1029
AclWI GGATC 2 cut(s) 216, 592
AcsI RAATTY 4 cut(s) 248, 283, 439, 1241
AcuI CTGAAG 2 cut(s) 452, 1099
AfaI GTAC 6 cut(s) 313, 489, 832, 906, 1163, 1235
AfiI CCNNNNNNNGG 4 cut(s) 123, 324, 464, 736
AjuI GAANNNNNNNTTGG 4 cut(s) 573, 605, 927, 959
AluBI AGCT 3 cut(s) 810, 1113, 1145
AluI AGCT 3 cut(s) 810, 1113, 1145
Alw21I GWGCWC 1 cut(s) 564
Alw26I GTCTC 2 cut(s) 485, 879
AlwI GGATC 2 cut(s) 216, 592
Ama87I CYCGRG 2 cut(s) 118, 563
ApoI RAATTY 4 cut(s) 248, 283, 439, 1241
ArsI GACNNNNNNTTYG 2 cut(s) 94, 126
AseI ATTAAT 1 cut(s) 702
Asp700I GAANNNNTTC 2 cut(s) 939, 1206
AspS9I GGNCC 2 cut(s) 102, 138
AsuHPI GGTGA 2 cut(s) 752, 984
AsuII TTCGAA 1 cut(s) 1254
AvaI CYCGRG 2 cut(s) 118, 563
AvaII GGWCC 2 cut(s) 102, 138
BarI GAAGNNNNNNTAC 2 cut(s) 1217, 1249
BbsI GAAGAC 1 cut(s) 1199
Bbv12I GWGCWC 1 cut(s) 564
BccI CCATC 2 cut(s) 117, 860
BcoDI GTCTC 2 cut(s) 485, 879
BfaI CTAG 7 cut(s) 416, 500, 716, 807, 1001, 1058, 1294
BfuAI ACCTGC 1 cut(s) 916
Bme18I GGWCC 2 cut(s) 102, 138
BmeT110I CYCGRG 2 cut(s) 118, 563
BmgT120I GGNCC 2 cut(s) 102, 138
BmsI GCATC 1 cut(s) 178
BpiI GAAGAC 1 cut(s) 1199
BplI GAGNNNNNCTC 2 cut(s) 1129, 1161
Bpu14I TTCGAA 1 cut(s) 1254
BpuEI CTTGAG 3 cut(s) 467, 968, 1076
BsaJI CCNNGG 1 cut(s) 273
Bsc4I CCNNNNNNNGG 4 cut(s) 123, 324, 464, 736
Bse3DI GCAATG 1 cut(s) 172
BseDI CCNNGG 1 cut(s) 273
BseLI CCNNNNNNNGG 4 cut(s) 123, 324, 464, 736
BseMI GCAATG 1 cut(s) 172
BseMII CTCAG 2 cut(s) 249, 1160
BseRI GAGGAG 2 cut(s) 223, 1044
BsgI GTGCAG 1 cut(s) 612
Bsh1236I CGCG 1 cut(s) 228
BsiHKAI GWGCWC 1 cut(s) 564
BsiHKCI CYCGRG 2 cut(s) 118, 563
BslFI GGGAC 1 cut(s) 100
BslI CCNNNNNNNGG 4 cut(s) 123, 324, 464, 736
BsmAI GTCTC 2 cut(s) 485, 879
BsmFI GGGAC 1 cut(s) 100
BsmI GAATGC 1 cut(s) 1219
BsoBI CYCGRG 2 cut(s) 118, 563
Bsp119I TTCGAA 1 cut(s) 1254
Bsp1286I GDGCHC 1 cut(s) 564
Bsp1407I TGTACA 2 cut(s) 311, 1233
Bsp143I GATC 5 cut(s) 208, 343, 584, 765, 989
Bsp68I TCGCGA 1 cut(s) 228
BspACI CCGC 3 cut(s) 325, 737, 1029
BspCNI CTCAG 2 cut(s) 248, 1159
BspFNI CGCG 1 cut(s) 228
BspHI TCATGA 1 cut(s) 195
BspMI ACCTGC 1 cut(s) 916
BspPI GGATC 2 cut(s) 216, 592
BspT104I TTCGAA 1 cut(s) 1254
BsrDI GCAATG 1 cut(s) 172
BsrGI TGTACA 2 cut(s) 311, 1233
BssECI CCNNGG 1 cut(s) 273
BssMI GATC 5 cut(s) 208, 343, 584, 765, 989
BssNAI GTATAC 1 cut(s) 818
BssT1I CCWWGG 1 cut(s) 273
Bst1107I GTATAC 1 cut(s) 818
Bst4CI ACNGT 6 cut(s) 109, 554, 671, 830, 870, 1166
Bst6I CTCTTC 3 cut(s) 150, 788, 1215
BstAUI TGTACA 2 cut(s) 311, 1233
BstBI TTCGAA 1 cut(s) 1254
BstC8I GCNNGC 1 cut(s) 1111
BstDEI CTNAG 2 cut(s) 235, 1146
BstFNI CGCG 1 cut(s) 228
BstKTI GATC 5 cut(s) 211, 346, 587, 768, 992
BstMAI GTCTC 2 cut(s) 485, 879
BstMBI GATC 5 cut(s) 208, 343, 584, 765, 989
BstUI CGCG 1 cut(s) 228
BstV2I GAAGAC 1 cut(s) 1199
BstX2I RGATCY 1 cut(s) 584
BstYI RGATCY 1 cut(s) 584
BstZ17I GTATAC 1 cut(s) 818
BtsIMutI CAGTG 2 cut(s) 756, 1171
BtuMI TCGCGA 1 cut(s) 228
BveI ACCTGC 1 cut(s) 916
Cac8I GCNNGC 1 cut(s) 1111
CciI TCATGA 1 cut(s) 195
Cfr13I GGNCC 2 cut(s) 102, 138
Csp6I GTAC 6 cut(s) 312, 488, 831, 905, 1162, 1234
CviAII CATG 3 cut(s) 196, 1022, 1040
CviJI RGCY 7 cut(s) 317, 429, 791, 810, 851, 1113, 1145
CviKI_1 RGCY 7 cut(s) 317, 429, 791, 810, 851, 1113, 1145
CviQI GTAC 6 cut(s) 312, 488, 831, 905, 1162, 1234
DdeI CTNAG 2 cut(s) 235, 1146
DpnI GATC 5 cut(s) 210, 345, 586, 767, 991
DpnII GATC 5 cut(s) 208, 343, 584, 765, 989
Eam1104I CTCTTC 3 cut(s) 150, 788, 1215
EarI CTCTTC 3 cut(s) 150, 788, 1215
EciI GGCGGA 1 cut(s) 340
Eco130I CCWWGG 1 cut(s) 273
Eco32I GATATC 1 cut(s) 968
Eco47I GGWCC 2 cut(s) 102, 138
Eco57I CTGAAG 2 cut(s) 452, 1099
Eco88I CYCGRG 2 cut(s) 118, 563
EcoRV GATATC 1 cut(s) 968
EcoT14I CCWWGG 1 cut(s) 273
ErhI CCWWGG 1 cut(s) 273
FaeI CATG 3 cut(s) 199, 1025, 1043
FalI AAGNNNNNCTT 2 cut(s) 573, 605
FaqI GGGAC 1 cut(s) 100
FatI CATG 3 cut(s) 195, 1021, 1039
FauI CCCGC 1 cut(s) 730
FblI GTMKAC 1 cut(s) 817
FspBI CTAG 7 cut(s) 416, 500, 716, 807, 1001, 1058, 1294
Hin1II CATG 3 cut(s) 199, 1025, 1043
HindIII AAGCTT 1 cut(s) 1111
HinfI GANTC 5 cut(s) 230, 743, 940, 997, 1032
HphI GGTGA 2 cut(s) 752, 984
Hpy166II GTNNAC 2 cut(s) 818, 905
Hpy188I TCNGA 4 cut(s) 238, 924, 1201, 1212
Hpy8I GTNNAC 2 cut(s) 818, 905
Hpy99I CGWCG 1 cut(s) 269
HpyAV CCTTC 3 cut(s) 575, 1196, 1219
HpyCH4III ACNGT 6 cut(s) 109, 554, 671, 830, 870, 1166
HpyCH4IV ACGT 1 cut(s) 200
HpyCH4V TGCA 7 cut(s) 41, 165, 408, 449, 629, 773, 1217
HpyF3I CTNAG 2 cut(s) 235, 1146
HpySE526I ACGT 1 cut(s) 200
Hsp92II CATG 3 cut(s) 199, 1025, 1043
Kzo9I GATC 5 cut(s) 208, 343, 584, 765, 989
LmnI GCTCC 1 cut(s) 712
LweI GCATC 1 cut(s) 178
MaeI CTAG 7 cut(s) 416, 500, 716, 807, 1001, 1058, 1294
MaeII ACGT 1 cut(s) 200
MaeIII GTNAC 1 cut(s) 1083
MalI GATC 5 cut(s) 210, 345, 586, 767, 991
MboI GATC 5 cut(s) 208, 343, 584, 765, 989
MboII GAAGA 4 cut(s) 137, 775, 1199, 1232
MflI RGATCY 1 cut(s) 584
MhlI GDGCHC 1 cut(s) 564
MluCI AATT 9 cut(s) 248, 283, 355, 383, 439, 576, 691, 889, 1241
MlyI GAGTC 1 cut(s) 224
MmeI TCCRAC 1 cut(s) 284
MroXI GAANNNNTTC 2 cut(s) 939, 1206
MseI TTAA 5 cut(s) 24, 647, 702, 726, 1247
Mva1269I GAATGC 1 cut(s) 1219
MvnI CGCG 1 cut(s) 228
NdeII GATC 5 cut(s) 208, 343, 584, 765, 989
NlaIII CATG 3 cut(s) 199, 1025, 1043
NmuCI GTSAC 1 cut(s) 1083
NruI TCGCGA 1 cut(s) 228
NspV TTCGAA 1 cut(s) 1254
PaeR7I CTCGAG 1 cut(s) 563
PagI TCATGA 1 cut(s) 195
PctI GAATGC 1 cut(s) 1219
PdmI GAANNNNTTC 2 cut(s) 939, 1206
PfeI GAWTC 4 cut(s) 743, 940, 997, 1032
PflMI CCANNNNNTGG 1 cut(s) 464
PleI GAGTC 1 cut(s) 224
PpsI GAGTC 1 cut(s) 224
PshBI ATTAAT 1 cut(s) 702
PspPI GGNCC 2 cut(s) 102, 138
PspXI VCTCGAGB 1 cut(s) 563
PsrI GAACNNNNNNTAC 2 cut(s) 480, 512
PsuI RGATCY 1 cut(s) 584
RruI TCGCGA 1 cut(s) 228
RsaI GTAC 6 cut(s) 313, 489, 832, 906, 1163, 1235
RsaNI GTAC 6 cut(s) 312, 488, 831, 905, 1162, 1234
SaqAI TTAA 5 cut(s) 24, 647, 702, 726, 1247
Sau3AI GATC 5 cut(s) 208, 343, 584, 765, 989
Sau96I GGNCC 2 cut(s) 102, 138
SchI GAGTC 1 cut(s) 224
SduI GDGCHC 1 cut(s) 564
SfaNI GCATC 1 cut(s) 178
Sfr274I CTCGAG 1 cut(s) 563
SfuI TTCGAA 1 cut(s) 1254
SinI GGWCC 2 cut(s) 102, 138
SlaI CTCGAG 1 cut(s) 563
SmlI CTYRAG 4 cut(s) 482, 563, 983, 1091
SmoI CTYRAG 4 cut(s) 482, 563, 983, 1091
Sse9I AATT 9 cut(s) 248, 283, 355, 383, 439, 576, 691, 889, 1241
SsiI CCGC 3 cut(s) 325, 737, 1029
SspMI CTAG 7 cut(s) 416, 500, 716, 807, 1001, 1058, 1294
StyI CCWWGG 1 cut(s) 273
TaaI ACNGT 6 cut(s) 109, 554, 671, 830, 870, 1166
TaiI ACGT 1 cut(s) 203
TaqI TCGA 5 cut(s) 264, 391, 492, 564, 1254
TasI AATT 9 cut(s) 248, 283, 355, 383, 439, 576, 691, 889, 1241
TatI WGTACW 4 cut(s) 311, 830, 1161, 1233
TfiI GAWTC 4 cut(s) 743, 940, 997, 1032
Tru1I TTAA 5 cut(s) 24, 647, 702, 726, 1247
Tru9I TTAA 5 cut(s) 24, 647, 702, 726, 1247
TscAI CASTG 2 cut(s) 756, 1171
TseFI GTSAC 1 cut(s) 1083
Tsp45I GTSAC 1 cut(s) 1083
TspDTI ATGAA 4 cut(s) 66, 166, 184, 747
TspRI CASTG 2 cut(s) 756, 1171
Van91I CCANNNNNTGG 1 cut(s) 464
VpaK11BI GGWCC 2 cut(s) 102, 138
VspI ATTAAT 1 cut(s) 702
XapI RAATTY 4 cut(s) 248, 283, 439, 1241
XbaI TCTAGA 2 cut(s) 1000, 1057
XhoI CTCGAG 1 cut(s) 563
XmiI GTMKAC 1 cut(s) 817
XmnI GAANNNNTTC 2 cut(s) 939, 1206
XspI CTAG 7 cut(s) 416, 500, 716, 807, 1001, 1058, 1294
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.