FvH4_7g28011

FBD-associated F-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000079
Physical Location & Seq
Forward (+)
20812082 .. 20815343
3262 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g28011.t1

Sequence Viewer

Length: 1371 bp
ATGGGTTCCAAATTACCAAAGCTTGAAGAGAGATTAGGAGAAGATAGGATCAGCCAACTGCCAGATGATGTTCTTGCTCGCATACTCTCTTTACTTGACAATACAGTTTTAGCTGTGCAGACCACCATTCTATCTAAACGTTGGAAAGACTTATGGAAATCCATTTCTTTTATTCGGTTGGGTGATGTTAGTATTGATGTCGTCGATGATCGTTTCATGACACTTGTTGACAGTGTGGTTACCTATCATGGCTCAACAGACATCCTAAAATTTCATCTATCTTATAATAATGATGGCACACGAGATGATATGTTAGCTGATGACTACATTTGTATTCGTAGATGGATTTGCACTGTTGTTCAACACAATGTCGCCGAGCTTCATCTTAATCTTTTCAATTTAGAGGGTAATGAACAAGAGTTCCCTTTTTTGATTCCTGAATGTCTTTTCATGTGTACAACACTAGTTGCTTTGAAGGTGGACTCCAATAGTATTTGTTTCTCAAATTGCCCTATAGAAGGGTGTTTCCCAAGGCTCAAGGTCCTTTATGTTGATATTGATGATTCTGATCAGGTATCAAGGAAATCACTAGAAAACCTTTTTCCTTGTTTCCCTGTACTTGAAGAGCTGACTATCCGTGGGGCTATTTTTGAGTCGAATATCAATATCTCTGCTCCTGAACTGAAGACATTAAGAATGAATTGCAGATATTGTGATTCCGTCGTCTTTTTCATTAATGCCCCAAAGCTGGAAAACTTGGATCTCATGGATGACTCTTTTCTTCCAAATGAATATCACTTCAAGAATGGAAGATCTCTAATCAAAGTTAAACTTACACTCCAGCATGATAATTATGCTTTTGAAGCTGATGACCGTGCTGATCACGCTACTGCTCTGTTTGCACAAATTTCCAATATTGAAGATCTGTCTCTTAGTCTTGAAGGTCTCTATGTTTCCTACTTGCCTGAGTTTGTCAAACTGAGTCAATTGGTGCTGGTTCTGCATGGTTTCAATTACTGGGAGTTTCTTATTGAATGTCTCAGGAGATGTCCTAATCTTAAACATCTGATCTTAGAACTTAAGGACAATAAATGGCGTGGCACAGACGACAAGCTAGAATGGAAGTTTTCCAATCCACATCAGTGTCCTGCTTGTTTGGTGTCTCACCTCCAGACCATCTCCATAAAAGGCTTCAAGGGACAACAGGATGAGATGGACGTAGCCCAGTTTTTATTAAAGAATGGTGTAGTTTTGAATACAATGAGTATCTACACTGTGAGTGAGGGTCTTCTGTCTACGAAGAAGTATTTACGCACGGAACTTCTGAAACATGTAGGGGGTTCAAAGTCTCGTGTTATCTGGGCGGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

457

Amino Acids

52.32

Weight (kDa)

5.32

Isoelectric Point (pI)

40.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At5g56370 PF24758 113 - 263 3.5e-12 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 381 - 423 1.5e-12 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 285
AccI GTMKAC 1 cut(s) 1295
AciI CCGC 1 cut(s) 1364
AclI AACGTT 1 cut(s) 139
AclWI GGATC 2 cut(s) 56, 768
AcsI RAATTY 2 cut(s) 269, 906
AcuI CTGAAG 1 cut(s) 704
AfaI GTAC 2 cut(s) 457, 618
AfiI CCNNNNNNNGG 2 cut(s) 518, 748
AflII CTTAAG 1 cut(s) 1079
AflIII ACRYGT 1 cut(s) 1330
AhlI ACTAGT 1 cut(s) 463
AleI CACNNNNGTG 1 cut(s) 1141
AloI GAACNNNNNNTCC 2 cut(s) 405, 437
AluBI AGCT 8 cut(s) 22, 113, 317, 379, 628, 748, 866, 1114
AluI AGCT 8 cut(s) 22, 113, 317, 379, 628, 748, 866, 1114
Alw26I GTCTC 5 cut(s) 933, 950, 1043, 1167, 1353
AlwI GGATC 2 cut(s) 56, 768
ApoI RAATTY 2 cut(s) 269, 906
AseI ATTAAT 1 cut(s) 735
AspS9I GGNCC 1 cut(s) 541
AsuHPI GGTGA 2 cut(s) 194, 1157
AvaII GGWCC 1 cut(s) 541
BauI CACGAG 2 cut(s) 300, 1350
BbsI GAAGAC 2 cut(s) 692, 1280
BccI CCATC 4 cut(s) 287, 336, 1184, 1207
BclI TGATCA 2 cut(s) 568, 880
BcoDI GTCTC 5 cut(s) 933, 950, 1043, 1167, 1353
BcuI ACTAGT 1 cut(s) 463
BfaI CTAG 3 cut(s) 464, 590, 1115
BfmI CTRYAG 1 cut(s) 513
BfrI CTTAAG 1 cut(s) 1079
BglII AGATCT 2 cut(s) 812, 922
Bme18I GGWCC 1 cut(s) 541
BmgT120I GGNCC 1 cut(s) 541
BmiI GGNNCC 1 cut(s) 7
BmrI ACTGGG 2 cut(s) 1027, 1219
BmuI ACTGGG 2 cut(s) 1027, 1219
BpiI GAAGAC 2 cut(s) 692, 1280
BpmI CTGGAG 2 cut(s) 824, 1154
BpuEI CTTGAG 1 cut(s) 521
BsaBI GATNNNNATC 1 cut(s) 567
BsaI GGTCTC 1 cut(s) 950
BsaJI CCNNGG 2 cut(s) 530, 637
BsaXI ACNNNNNCTCC 2 cut(s) 822, 852
Bsc4I CCNNNNNNNGG 2 cut(s) 518, 748
Bse1I ACTGG 2 cut(s) 1022, 1225
Bse8I GATNNNNATC 1 cut(s) 567
BseDI CCNNGG 2 cut(s) 530, 637
BseGI GGATG 3 cut(s) 261, 775, 1213
BseJI GATNNNNATC 1 cut(s) 567
BseLI CCNNNNNNNGG 2 cut(s) 518, 748
BseMII CTCAG 3 cut(s) 957, 971, 1054
BseNI ACTGG 2 cut(s) 1022, 1225
BsgI GTGCAG 1 cut(s) 137
BslFI GGGAC 1 cut(s) 1212
BslI CCNNNNNNNGG 2 cut(s) 518, 748
BsmAI GTCTC 5 cut(s) 933, 950, 1043, 1167, 1353
BsmFI GGGAC 1 cut(s) 1212
Bso31I GGTCTC 1 cut(s) 950
Bsp1407I TGTACA 1 cut(s) 455
Bsp143I GATC 8 cut(s) 48, 208, 568, 760, 812, 880, 922, 1068
BspACI CCGC 1 cut(s) 1364
BspCNI CTCAG 3 cut(s) 958, 972, 1053
BspHI TCATGA 1 cut(s) 216
BspLI GGNNCC 1 cut(s) 7
BspPI GGATC 2 cut(s) 56, 768
BspQI GCTCTTC 1 cut(s) 618
BspTI CTTAAG 1 cut(s) 1079
BspTNI GGTCTC 1 cut(s) 950
BsrGI TGTACA 1 cut(s) 455
BsrI ACTGG 2 cut(s) 1022, 1225
BssECI CCNNGG 2 cut(s) 530, 637
BssMI GATC 8 cut(s) 48, 208, 568, 760, 812, 880, 922, 1068
BssSI CACGAG 2 cut(s) 300, 1350
BssT1I CCWWGG 1 cut(s) 530
Bst2BI CACGAG 2 cut(s) 300, 1350
Bst4CI ACNGT 5 cut(s) 106, 233, 355, 875, 1276
Bst6I CTCTTC 2 cut(s) 21, 618
BstAFI CTTAAG 1 cut(s) 1079
BstAUI TGTACA 1 cut(s) 455
BstC8I GCNNGC 1 cut(s) 79
BstDEI CTNAG 5 cut(s) 932, 966, 980, 1040, 1072
BstDSI CCRYGG 1 cut(s) 637
BstEII GGTNACC 1 cut(s) 238
BstENI CCTNNNNNAGG 1 cut(s) 516
BstF5I GGATG 3 cut(s) 261, 775, 1213
BstKTI GATC 8 cut(s) 51, 211, 571, 763, 815, 883, 925, 1071
BstMAI GTCTC 5 cut(s) 933, 950, 1043, 1167, 1353
BstMBI GATC 8 cut(s) 48, 208, 568, 760, 812, 880, 922, 1068
BstMWI GCNNNNNNNGC 4 cut(s) 863, 884, 899, 1000
BstNSI RCATGY 1 cut(s) 1334
BstPI GGTNACC 1 cut(s) 238
BstSFI CTRYAG 1 cut(s) 513
BstV2I GAAGAC 2 cut(s) 692, 1280
BstX2I RGATCY 3 cut(s) 760, 812, 922
BstYI RGATCY 3 cut(s) 760, 812, 922
BtgI CCRYGG 1 cut(s) 637
BtsCI GGATG 3 cut(s) 261, 775, 1213
BtsIMutI CAGTG 4 cut(s) 238, 351, 1148, 1272
Cac8I GCNNGC 1 cut(s) 79
CciI TCATGA 1 cut(s) 216
Cfr13I GGNCC 1 cut(s) 541
Csp6I GTAC 2 cut(s) 456, 617
CviAII CATG 7 cut(s) 217, 248, 451, 766, 845, 1004, 1331
CviQI GTAC 2 cut(s) 456, 617
DdeI CTNAG 5 cut(s) 932, 966, 980, 1040, 1072
DpnI GATC 8 cut(s) 50, 210, 570, 762, 814, 882, 924, 1070
DpnII GATC 8 cut(s) 48, 208, 568, 760, 812, 880, 922, 1068
Eam1104I CTCTTC 2 cut(s) 21, 618
EarI CTCTTC 2 cut(s) 21, 618
Eco130I CCWWGG 1 cut(s) 530
Eco31I GGTCTC 1 cut(s) 950
Eco47I GGWCC 1 cut(s) 541
Eco57I CTGAAG 1 cut(s) 704
Eco91I GGTNACC 1 cut(s) 238
EcoNI CCTNNNNNAGG 1 cut(s) 516
EcoO109I RGGNCCY 1 cut(s) 541
EcoO65I GGTNACC 1 cut(s) 238
EcoT14I CCWWGG 1 cut(s) 530
ErhI CCWWGG 1 cut(s) 530
FaeI CATG 7 cut(s) 220, 251, 454, 769, 848, 1007, 1334
FalI AAGNNNNNCTT 2 cut(s) 816, 848
FaqI GGGAC 1 cut(s) 1212
FatI CATG 7 cut(s) 216, 247, 450, 765, 844, 1003, 1330
FbaI TGATCA 2 cut(s) 568, 880
FblI GTMKAC 1 cut(s) 1295
FokI GGATG 3 cut(s) 248, 782, 1220
FspBI CTAG 3 cut(s) 464, 590, 1115
GsuI CTGGAG 2 cut(s) 824, 1154
Hin1II CATG 7 cut(s) 220, 251, 454, 769, 848, 1007, 1334
HincII GTYRAC 1 cut(s) 229
HindII GTYRAC 1 cut(s) 229
HindIII AAGCTT 1 cut(s) 20
HinfI GANTC 7 cut(s) 433, 482, 563, 653, 716, 773, 982
HphI GGTGA 2 cut(s) 194, 1157
Hpy166II GTNNAC 4 cut(s) 229, 456, 481, 1296
Hpy188I TCNGA 3 cut(s) 568, 1068, 1326
Hpy188III TCNNGA 7 cut(s) 217, 437, 677, 802, 938, 1042, 1171
Hpy8I GTNNAC 4 cut(s) 229, 456, 481, 1296
Hpy99I CGWCG 2 cut(s) 206, 725
HpyAV CCTTC 3 cut(s) 469, 512, 935
HpyCH4III ACNGT 5 cut(s) 106, 233, 355, 875, 1276
HpyCH4IV ACGT 2 cut(s) 139, 1218
HpyCH4V TGCA 5 cut(s) 118, 351, 705, 902, 1003
HpyF10VI GCNNNNNNNGC 4 cut(s) 863, 884, 899, 1000
HpyF3I CTNAG 5 cut(s) 932, 966, 980, 1040, 1072
HpySE526I ACGT 2 cut(s) 139, 1218
Hsp92II CATG 7 cut(s) 220, 251, 454, 769, 848, 1007, 1334
Ksp22I TGATCA 2 cut(s) 568, 880
Kzo9I GATC 8 cut(s) 48, 208, 568, 760, 812, 880, 922, 1068
LguI GCTCTTC 1 cut(s) 618
LmnI GCTCC 1 cut(s) 679
MaeI CTAG 3 cut(s) 464, 590, 1115
MaeII ACGT 2 cut(s) 139, 1218
MaeIII GTNAC 1 cut(s) 238
MalI GATC 8 cut(s) 50, 210, 570, 762, 814, 882, 924, 1070
MboI GATC 8 cut(s) 48, 208, 568, 760, 812, 880, 922, 1068
MboII GAAGA 9 cut(s) 38, 53, 635, 697, 773, 822, 932, 1280, 1312
MfeI CAATTG 1 cut(s) 986
MflI RGATCY 3 cut(s) 760, 812, 922
MluCI AATT 9 cut(s) 11, 269, 397, 505, 700, 850, 906, 986, 1012
MlyI GAGTC 4 cut(s) 476, 662, 767, 991
MmeI TCCRAC 1 cut(s) 122
MnlI CCTC 3 cut(s) 397, 1178, 1276
MseI TTAA 7 cut(s) 387, 692, 735, 828, 1059, 1080, 1235
MslI CAYNNNNRTG 1 cut(s) 1141
MspCI CTTAAG 1 cut(s) 1079
MunI CAATTG 1 cut(s) 986
MwoI GCNNNNNNNGC 4 cut(s) 863, 884, 899, 1000
NdeII GATC 8 cut(s) 48, 208, 568, 760, 812, 880, 922, 1068
NlaIII CATG 7 cut(s) 220, 251, 454, 769, 848, 1007, 1334
NlaIV GGNNCC 1 cut(s) 7
NmeAIII GCCGAG 1 cut(s) 400
NspI RCATGY 1 cut(s) 1334
OliI CACNNNNGTG 1 cut(s) 1141
PagI TCATGA 1 cut(s) 216
PciI ACATGT 1 cut(s) 1330
PciSI GCTCTTC 1 cut(s) 618
PfeI GAWTC 3 cut(s) 433, 563, 716
PleI GAGTC 4 cut(s) 476, 661, 767, 990
PpsI GAGTC 4 cut(s) 476, 661, 767, 990
PpuMI RGGWCCY 1 cut(s) 541
PscI ACATGT 1 cut(s) 1330
PshBI ATTAAT 1 cut(s) 735
PsiI TTATAA 1 cut(s) 285
Psp1406I AACGTT 1 cut(s) 139
Psp5II RGGWCCY 1 cut(s) 541
PspEI GGTNACC 1 cut(s) 238
PspN4I GGNNCC 1 cut(s) 7
PspPI GGNCC 1 cut(s) 541
PspPPI RGGWCCY 1 cut(s) 541
PsuI RGATCY 3 cut(s) 760, 812, 922
RsaI GTAC 2 cut(s) 457, 618
RsaNI GTAC 2 cut(s) 456, 617
RseI CAYNNNNRTG 1 cut(s) 1141
SapI GCTCTTC 1 cut(s) 618
SaqAI TTAA 7 cut(s) 387, 692, 735, 828, 1059, 1080, 1235
Sau3AI GATC 8 cut(s) 48, 208, 568, 760, 812, 880, 922, 1068
Sau96I GGNCC 1 cut(s) 541
SchI GAGTC 4 cut(s) 476, 662, 767, 991
SfcI CTRYAG 1 cut(s) 513
SinI GGWCC 1 cut(s) 541
SmiMI CAYNNNNRTG 1 cut(s) 1141
SmlI CTYRAG 2 cut(s) 536, 1079
SmoI CTYRAG 2 cut(s) 536, 1079
SpeI ACTAGT 1 cut(s) 463
Sse9I AATT 9 cut(s) 11, 269, 397, 505, 700, 850, 906, 986, 1012
SsiI CCGC 1 cut(s) 1364
SspI AATATT 1 cut(s) 916
SspMI CTAG 3 cut(s) 464, 590, 1115
StyI CCWWGG 1 cut(s) 530
TaaI ACNGT 5 cut(s) 106, 233, 355, 875, 1276
TaiI ACGT 2 cut(s) 142, 1221
TaqI TCGA 2 cut(s) 204, 656
TasI AATT 9 cut(s) 11, 269, 397, 505, 700, 850, 906, 986, 1012
TatI WGTACW 2 cut(s) 455, 616
TfiI GAWTC 3 cut(s) 433, 563, 716
Tru1I TTAA 7 cut(s) 387, 692, 735, 828, 1059, 1080, 1235
Tru9I TTAA 7 cut(s) 387, 692, 735, 828, 1059, 1080, 1235
TscAI CASTG 4 cut(s) 238, 358, 1148, 1279
TspDTI ATGAA 8 cut(s) 205, 263, 371, 426, 439, 713, 721, 804
TspGWI ACGGA 3 cut(s) 626, 709, 1331
TspRI CASTG 4 cut(s) 238, 358, 1148, 1279
Vha464I CTTAAG 1 cut(s) 1079
VpaK11BI GGWCC 1 cut(s) 541
VspI ATTAAT 1 cut(s) 735
XagI CCTNNNNNAGG 1 cut(s) 516
XapI RAATTY 2 cut(s) 269, 906
XceI RCATGY 1 cut(s) 1334
XmiI GTMKAC 1 cut(s) 1295
XspI CTAG 3 cut(s) 464, 590, 1115
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.