LRR-repeat protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Frigida | PF07899 | 361 - 509 | 2e-16 | Frigida-like protein |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 543, 1397 |
| AbsI | CCTCGAGG | 1 cut(s) | 32 |
| Acc36I | ACCTGC | 1 cut(s) | 928 |
| AccII | CGCG | 1 cut(s) | 96 |
| AciI | CCGC | 2 cut(s) | 94, 313 |
| AclWI | GGATC | 3 cut(s) | 85, 1287, 1300 |
| AcsI | RAATTY | 2 cut(s) | 1189, 1363 |
| AcuI | CTGAAG | 2 cut(s) | 71, 809 |
| AfaI | GTAC | 3 cut(s) | 29, 1119, 1152 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 100, 694, 1289 |
| AflII | CTTAAG | 1 cut(s) | 656 |
| AjiI | CACGTC | 1 cut(s) | 993 |
| AjnI | CCWGG | 1 cut(s) | 1058 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 302, 334 |
| AlwI | GGATC | 3 cut(s) | 85, 1287, 1300 |
| Ama87I | CYCGRG | 1 cut(s) | 32 |
| AoxI | GGCC | 3 cut(s) | 603, 855, 1199 |
| ApeKI | GCWGC | 3 cut(s) | 1034, 1133, 1508 |
| ApoI | RAATTY | 2 cut(s) | 1189, 1363 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 528, 1249 |
| AsuHPI | GGTGA | 2 cut(s) | 1272, 1468 |
| AsuNHI | GCTAGC | 1 cut(s) | 1528 |
| AvaI | CYCGRG | 1 cut(s) | 32 |
| BamHI | GGATCC | 1 cut(s) | 1292 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1434, 1466 |
| BbsI | GAAGAC | 1 cut(s) | 452 |
| BbvI | GCAGC | 3 cut(s) | 1046, 1120, 1520 |
| BccI | CCATC | 2 cut(s) | 825, 1305 |
| BciT130I | CCWGG | 1 cut(s) | 1060 |
| BclI | TGATCA | 3 cut(s) | 549, 964, 1093 |
| BfaI | CTAG | 4 cut(s) | 1026, 1322, 1481, 1529 |
| BfrI | CTTAAG | 1 cut(s) | 656 |
| BfuAI | ACCTGC | 1 cut(s) | 928 |
| BisI | GCNGC | 3 cut(s) | 1035, 1134, 1509 |
| BlsI | GCNGC | 3 cut(s) | 1036, 1135, 1510 |
| Bme1390I | CCNGG | 1 cut(s) | 1060 |
| BmeT110I | CYCGRG | 1 cut(s) | 32 |
| BmgBI | CACGTC | 1 cut(s) | 993 |
| BmiI | GGNNCC | 3 cut(s) | 918, 1008, 1294 |
| BmrFI | CCNGG | 1 cut(s) | 1060 |
| BmrI | ACTGGG | 1 cut(s) | 1324 |
| BmsI | GCATC | 5 cut(s) | 184, 357, 984, 1300, 1335 |
| BmtI | GCTAGC | 1 cut(s) | 1532 |
| BmuI | ACTGGG | 1 cut(s) | 1324 |
| BpiI | GAAGAC | 1 cut(s) | 452 |
| Bpu10I | CCTNAGC | 1 cut(s) | 338 |
| BpuEI | CTTGAG | 3 cut(s) | 494, 879, 1228 |
| BsaJI | CCNNGG | 1 cut(s) | 1059 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 449, 479 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 100, 694, 1289 |
| Bse1I | ACTGG | 2 cut(s) | 732, 1330 |
| Bse3DI | GCAATG | 1 cut(s) | 204 |
| BseBI | CCWGG | 1 cut(s) | 1060 |
| BseDI | CCNNGG | 1 cut(s) | 1059 |
| BseGI | GGATG | 1 cut(s) | 1069 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 100, 694, 1289 |
| BseMI | GCAATG | 1 cut(s) | 204 |
| BseMII | CTCAG | 2 cut(s) | 1350, 1478 |
| BseNI | ACTGG | 2 cut(s) | 732, 1330 |
| BseRI | GAGGAG | 4 cut(s) | 50, 113, 218, 344 |
| BseXI | GCAGC | 3 cut(s) | 1046, 1120, 1520 |
| BseYI | CCCAGC | 1 cut(s) | 1159 |
| Bsh1236I | CGCG | 1 cut(s) | 96 |
| BshFI | GGCC | 3 cut(s) | 605, 857, 1201 |
| BsiHKCI | CYCGRG | 1 cut(s) | 32 |
| BslFI | GGGAC | 1 cut(s) | 603 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 100, 694, 1289 |
| BsmFI | GGGAC | 1 cut(s) | 603 |
| BsnI | GGCC | 3 cut(s) | 605, 857, 1201 |
| BsoBI | CYCGRG | 1 cut(s) | 32 |
| Bsp143I | GATC | 5 cut(s) | 90, 549, 964, 1093, 1292 |
| BspACI | CCGC | 2 cut(s) | 94, 313 |
| BspANI | GGCC | 3 cut(s) | 605, 857, 1201 |
| BspCNI | CTCAG | 2 cut(s) | 1351, 1477 |
| BspFNI | CGCG | 1 cut(s) | 96 |
| BspLI | GGNNCC | 3 cut(s) | 918, 1008, 1294 |
| BspMI | ACCTGC | 1 cut(s) | 928 |
| BspOI | GCTAGC | 1 cut(s) | 1532 |
| BspPI | GGATC | 3 cut(s) | 85, 1287, 1300 |
| BspTI | CTTAAG | 1 cut(s) | 656 |
| BsrDI | GCAATG | 1 cut(s) | 204 |
| BsrI | ACTGG | 2 cut(s) | 732, 1330 |
| BssECI | CCNNGG | 1 cut(s) | 1059 |
| BssMI | GATC | 5 cut(s) | 90, 549, 964, 1093, 1292 |
| Bst2UI | CCWGG | 1 cut(s) | 1060 |
| Bst4CI | ACNGT | 1 cut(s) | 377 |
| Bst6I | CTCTTC | 2 cut(s) | 378, 780 |
| BstAFI | CTTAAG | 1 cut(s) | 656 |
| BstC8I | GCNNGC | 6 cut(s) | 846, 855, 1184, 1350, 1530, 1534 |
| BstDEI | CTNAG | 5 cut(s) | 338, 906, 1359, 1464, 1512 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 692 |
| BstF5I | GGATG | 1 cut(s) | 1069 |
| BstFNI | CGCG | 1 cut(s) | 96 |
| BstKTI | GATC | 5 cut(s) | 93, 552, 967, 1096, 1295 |
| BstMBI | GATC | 5 cut(s) | 90, 549, 964, 1093, 1292 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 644, 850, 854, 1084 |
| BstNI | CCWGG | 1 cut(s) | 1060 |
| BstNSI | RCATGY | 1 cut(s) | 1186 |
| BstSCI | CCNGG | 1 cut(s) | 1058 |
| BstUI | CGCG | 1 cut(s) | 96 |
| BstV1I | GCAGC | 3 cut(s) | 1046, 1120, 1520 |
| BstV2I | GAAGAC | 1 cut(s) | 452 |
| BstX2I | RGATCY | 2 cut(s) | 90, 1292 |
| BstYI | RGATCY | 2 cut(s) | 90, 1292 |
| BsuRI | GGCC | 3 cut(s) | 605, 857, 1201 |
| BtrI | CACGTC | 1 cut(s) | 993 |
| BtsCI | GGATG | 1 cut(s) | 1069 |
| BtsI | GCAGTG | 1 cut(s) | 942 |
| BtsIMutI | CAGTG | 4 cut(s) | 725, 942, 1337, 1374 |
| BveI | ACCTGC | 1 cut(s) | 928 |
| Cac8I | GCNNGC | 6 cut(s) | 846, 855, 1184, 1350, 1530, 1534 |
| Csp6I | GTAC | 3 cut(s) | 28, 1118, 1151 |
| CviAII | CATG | 4 cut(s) | 547, 1183, 1286, 1499 |
| CviQI | GTAC | 3 cut(s) | 28, 1118, 1151 |
| DdeI | CTNAG | 5 cut(s) | 338, 906, 1359, 1464, 1512 |
| DpnI | GATC | 5 cut(s) | 92, 551, 966, 1095, 1294 |
| DpnII | GATC | 5 cut(s) | 90, 549, 964, 1093, 1292 |
| DraI | TTTAAA | 1 cut(s) | 483 |
| Eam1104I | CTCTTC | 2 cut(s) | 378, 780 |
| EarI | CTCTTC | 2 cut(s) | 378, 780 |
| Eco32I | GATATC | 2 cut(s) | 436, 1319 |
| Eco57I | CTGAAG | 2 cut(s) | 71, 809 |
| Eco88I | CYCGRG | 1 cut(s) | 32 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 692 |
| EcoRI | GAATTC | 1 cut(s) | 1363 |
| EcoRII | CCWGG | 1 cut(s) | 1058 |
| EcoRV | GATATC | 2 cut(s) | 436, 1319 |
| FaeI | CATG | 4 cut(s) | 550, 1186, 1289, 1502 |
| FaqI | GGGAC | 1 cut(s) | 603 |
| FatI | CATG | 4 cut(s) | 546, 1182, 1285, 1498 |
| FauI | CCCGC | 1 cut(s) | 306 |
| FbaI | TGATCA | 3 cut(s) | 549, 964, 1093 |
| Fnu4HI | GCNGC | 3 cut(s) | 1035, 1134, 1509 |
| FokI | GGATG | 1 cut(s) | 1076 |
| Fsp4HI | GCNGC | 3 cut(s) | 1035, 1134, 1509 |
| FspBI | CTAG | 4 cut(s) | 1026, 1322, 1481, 1529 |
| GluI | GCNGC | 3 cut(s) | 1035, 1134, 1509 |
| GsaI | CCCAGC | 1 cut(s) | 1163 |
| HaeIII | GGCC | 3 cut(s) | 605, 857, 1201 |
| Hin1II | CATG | 4 cut(s) | 550, 1186, 1289, 1502 |
| HindIII | AAGCTT | 1 cut(s) | 1445 |
| HinfI | GANTC | 6 cut(s) | 5, 75, 140, 617, 722, 1013 |
| HphI | GGTGA | 2 cut(s) | 1272, 1468 |
| Hpy166II | GTNNAC | 2 cut(s) | 767, 780 |
| Hpy188I | TCNGA | 6 cut(s) | 90, 145, 828, 1302, 1467, 1494 |
| Hpy188III | TCNNGA | 3 cut(s) | 158, 1242, 1481 |
| Hpy8I | GTNNAC | 2 cut(s) | 767, 780 |
| HpyAV | CCTTC | 5 cut(s) | 384, 494, 960, 1207, 1255 |
| HpyCH4III | ACNGT | 1 cut(s) | 377 |
| HpyCH4IV | ACGT | 2 cut(s) | 154, 992 |
| HpyCH4V | TGCA | 9 cut(s) | 197, 256, 370, 792, 848, 975, 1034, 1313, 1508 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 644, 850, 854, 1084 |
| HpyF3I | CTNAG | 5 cut(s) | 338, 906, 1359, 1464, 1512 |
| HpySE526I | ACGT | 2 cut(s) | 154, 992 |
| Hsp92II | CATG | 4 cut(s) | 550, 1186, 1289, 1502 |
| Ksp22I | TGATCA | 3 cut(s) | 549, 964, 1093 |
| Kzo9I | GATC | 5 cut(s) | 90, 549, 964, 1093, 1292 |
| LmnI | GCTCC | 4 cut(s) | 37, 841, 952, 1264 |
| Lsp1109I | GCAGC | 3 cut(s) | 1046, 1120, 1520 |
| LweI | GCATC | 5 cut(s) | 184, 357, 984, 1300, 1335 |
| MaeI | CTAG | 4 cut(s) | 1026, 1322, 1481, 1529 |
| MaeII | ACGT | 2 cut(s) | 154, 992 |
| MaeIII | GTNAC | 5 cut(s) | 63, 110, 225, 988, 1239 |
| MalI | GATC | 5 cut(s) | 92, 551, 966, 1095, 1294 |
| MboI | GATC | 5 cut(s) | 90, 549, 964, 1093, 1292 |
| MfeI | CAATTG | 1 cut(s) | 960 |
| MflI | RGATCY | 2 cut(s) | 90, 1292 |
| MlyI | GAGTC | 2 cut(s) | 69, 149 |
| MmeI | TCCRAC | 4 cut(s) | 129, 1020, 1270, 1392 |
| MroXI | GAANNNNTTC | 2 cut(s) | 528, 1249 |
| MseI | TTAA | 4 cut(s) | 482, 657, 678, 740 |
| MspCI | CTTAAG | 1 cut(s) | 656 |
| MspR9I | CCNGG | 1 cut(s) | 1060 |
| MunI | CAATTG | 1 cut(s) | 960 |
| MvaI | CCWGG | 1 cut(s) | 1060 |
| MvnI | CGCG | 1 cut(s) | 96 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 644, 850, 854, 1084 |
| NdeII | GATC | 5 cut(s) | 90, 549, 964, 1093, 1292 |
| NheI | GCTAGC | 1 cut(s) | 1528 |
| NlaIII | CATG | 4 cut(s) | 550, 1186, 1289, 1502 |
| NlaIV | GGNNCC | 3 cut(s) | 918, 1008, 1294 |
| NmuCI | GTSAC | 2 cut(s) | 988, 1239 |
| NspI | RCATGY | 1 cut(s) | 1186 |
| PaeI | GCATGC | 1 cut(s) | 1186 |
| PaeR7I | CTCGAG | 1 cut(s) | 32 |
| PdmI | GAANNNNTTC | 2 cut(s) | 528, 1249 |
| PfeI | GAWTC | 3 cut(s) | 617, 722, 1013 |
| PkrI | GCNGC | 3 cut(s) | 1036, 1135, 1510 |
| PleI | GAGTC | 2 cut(s) | 69, 148 |
| PpsI | GAGTC | 2 cut(s) | 69, 148 |
| PsiI | TTATAA | 2 cut(s) | 543, 1397 |
| Psp6I | CCWGG | 1 cut(s) | 1058 |
| PspFI | CCCAGC | 1 cut(s) | 1159 |
| PspGI | CCWGG | 1 cut(s) | 1058 |
| PspN4I | GGNNCC | 3 cut(s) | 918, 1008, 1294 |
| PspXI | VCTCGAGB | 1 cut(s) | 32 |
| PsuI | RGATCY | 2 cut(s) | 90, 1292 |
| RsaI | GTAC | 3 cut(s) | 29, 1119, 1152 |
| RsaNI | GTAC | 3 cut(s) | 28, 1118, 1151 |
| SaqAI | TTAA | 4 cut(s) | 482, 657, 678, 740 |
| SatI | GCNGC | 3 cut(s) | 1035, 1134, 1509 |
| Sau3AI | GATC | 5 cut(s) | 90, 549, 964, 1093, 1292 |
| SchI | GAGTC | 2 cut(s) | 69, 149 |
| ScrFI | CCNGG | 1 cut(s) | 1060 |
| SfaNI | GCATC | 5 cut(s) | 184, 357, 984, 1300, 1335 |
| Sfr274I | CTCGAG | 1 cut(s) | 32 |
| SlaI | CTCGAG | 1 cut(s) | 32 |
| SmlI | CTYRAG | 5 cut(s) | 32, 509, 656, 894, 1207 |
| SmoI | CTYRAG | 5 cut(s) | 32, 509, 656, 894, 1207 |
| SphI | GCATGC | 1 cut(s) | 1186 |
| SsiI | CCGC | 2 cut(s) | 94, 313 |
| SspMI | CTAG | 4 cut(s) | 1026, 1322, 1481, 1529 |
| StyD4I | CCNGG | 1 cut(s) | 1058 |
| TaaI | ACNGT | 1 cut(s) | 377 |
| TaiI | ACGT | 2 cut(s) | 157, 995 |
| TaqI | TCGA | 2 cut(s) | 33, 381 |
| TaqII | GACCGA | 1 cut(s) | 1134 |
| TatI | WGTACW | 1 cut(s) | 1117 |
| TfiI | GAWTC | 3 cut(s) | 617, 722, 1013 |
| Tru1I | TTAA | 4 cut(s) | 482, 657, 678, 740 |
| Tru9I | TTAA | 4 cut(s) | 482, 657, 678, 740 |
| TscAI | CASTG | 4 cut(s) | 732, 949, 1337, 1374 |
| TseFI | GTSAC | 2 cut(s) | 988, 1239 |
| TseI | GCWGC | 3 cut(s) | 1034, 1133, 1508 |
| Tsp45I | GTSAC | 2 cut(s) | 988, 1239 |
| TspDTI | ATGAA | 5 cut(s) | 582, 666, 845, 942, 1008 |
| TspRI | CASTG | 4 cut(s) | 732, 949, 1337, 1374 |
| Vha464I | CTTAAG | 1 cut(s) | 656 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 692 |
| XapI | RAATTY | 2 cut(s) | 1189, 1363 |
| XbaI | TCTAGA | 1 cut(s) | 1480 |
| XceI | RCATGY | 1 cut(s) | 1186 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 268 |
| XhoI | CTCGAG | 1 cut(s) | 32 |
| XmnI | GAANNNNTTC | 2 cut(s) | 528, 1249 |
| XspI | CTAG | 4 cut(s) | 1026, 1322, 1481, 1529 |