Rh7CG177400

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0000079
Physical Location & Seq
Forward (+)
15145580 .. 15147905
2326 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG177400.1

Sequence Viewer

Length: 1491 bp
ATGGCTTCAAACTCAACTCTTCGCAAATCACGCAATGAGGACAGGATCAGTGGGTTGCCGGATGCAATTCTTTGCCACATTCTGTCTTTCTTTTCAACCAGAGAGGCTGTAAAGACTAGCATTTTATCACATAGATGGAGGAATGTCTGGGCTTCTGTTCCCAATCTAGATTTCGATGAACGTGATTATGAGCTAGACCATGTTTTCCGTACTCTGCCGCAGCCAGTAAGATATGAGCCGGATTGGTTTGCACAGTTTGTGAATCGTGTACTTCTCAGTCGATGCCCGGGAAACATTCATAGGTTCTGTCTTCAAACTACTGAGATGATGAATGTTTCTCTTATTGATGCTTGGGTTTCCACTGCCATAAAGCATAATGTTGTTGAACTTGTTCTTAGTTCAGGCTTTCCCCGCTTGCCGGATTTTGAGATTCCGAGATGTCTTTTCGTGTGCAACACATTGGTTAGTTTGAAGTTGGTGGTGCACAAAAAAATTCGTGCCGTTACTCCTCCCTCACATTGTTTCCCCTGTCTCAAGTTGCTACATGTTACATTTGGGTATCCTGATTCTCACACAGTGGAGAAGTTGTTTCCTTCTTTCCCTGTACTTGAAGATCTTGTTATAGATGGACAAGATGAAGATGCGTCAGCTTTCAATCTTGTTATATCTGCACCCAAACTGAAAAGACTGCAAATTAGCTTCAGTGTCCATAAATTTGCTATGACAGCTGCTGCAAATCATTTTGAGGATTATGAAAATTATGGGTGCCAAATTTTTGTCAGTGTTGATGCTCCAAATCTTGAAGAGTTAGATATCTACTATGATTTTCTGGTTAGCTATTCTTTGAAGAATGCCAAATGTCTGAGGAAAGTCAAGATAGATTTCTTAGATGTGAAAGAGCTTGTGGACTGTGAATATTTTCTTGGCCTTGCTGATCGTATATGCCAGCTTTTTGCAGATATTTGTAACGCTAAATACCTTACAGTTTCAGCTCCAATTTTGGTTGCTCTTGAGGGTGGATATCAACGTCTGCCTACATTTAATGATTTGAACCATTTGGAGCTGAAACTTCAAACTTGTCGATGTTTGCAATTGCTGACAACTTTGCTCAAGATATCACCAAATTTGAAACATCTCAAGATATCACCGAATAGGAAACATCTTCGGTGTGCAAATGACTACAAATATTGTGATGATGATAATGAGGATGTTCTTGTACATGAATGGGGTGCACCAGAATTTGCAAACATTTGTTTGGTTTCACACCTCAAGACTGTTTGCCTATGGGATTTCAAGGGGTGTCCAAATGACATGGAAGTGGCAAAGTACTTGGTGAAGCATGGCAAGGCTTTGAATAGGGTGACTATTCATACTCACTTCAGTGAAAACAAAGAGATGAAGTCACGGTCTCCTACTGCCTTATGGTCGAAATTTTCAAAGTTCCCAAGGGGTTCCAAGACATGTGAGATTGAATTTCGGATAATTATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

496

Amino Acids

57.0

Weight (kDa)

7.52

Isoelectric Point (pI)

37.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 16 - 55 9.9e-08 F-box domain
LRR_At5g56370 PF24758 115 - 279 6e-10 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 418 - 456 8.9e-10 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 765
AciI CCGC 2 cut(s) 218, 412
AclWI GGATC 1 cut(s) 53
AcsI RAATTY 7 cut(s) 492, 713, 771, 1123, 1238, 1430, 1472
AcuI CTGAAG 2 cut(s) 685, 1363
AdeI CACNNNGTG 1 cut(s) 577
AfaI GTAC 5 cut(s) 211, 270, 606, 1218, 1328
AfiI CCNNNNNNNGG 1 cut(s) 418
AflIII ACRYGT 2 cut(s) 544, 1460
AjuI GAANNNNNNNTTGG 4 cut(s) 155, 187, 906, 938
AleI CACNNNNGTG 1 cut(s) 1380
AluBI AGCT 9 cut(s) 193, 650, 699, 728, 837, 901, 949, 992, 1063
AluI AGCT 9 cut(s) 193, 650, 699, 728, 837, 901, 949, 992, 1063
Alw21I GWGCWC 2 cut(s) 486, 1234
Alw26I GTCTC 2 cut(s) 536, 1413
Alw44I GTGCAC 2 cut(s) 482, 1230
AlwI GGATC 1 cut(s) 53
AlwNI CAGNNNCTG 1 cut(s) 731
Ama87I CYCGRG 1 cut(s) 286
AoxI GGCC 1 cut(s) 925
ApaLI GTGCAC 2 cut(s) 482, 1230
ApeKI GCWGC 3 cut(s) 220, 728, 731
ApoI RAATTY 7 cut(s) 492, 713, 771, 1123, 1238, 1430, 1472
Asp700I GAANNNNTTC 2 cut(s) 390, 918
AsuC2I CCSGG 2 cut(s) 287, 288
AsuHPI GGTGA 4 cut(s) 1110, 1137, 1345, 1372
AvaI CYCGRG 1 cut(s) 286
BaeGI GKGCMC 2 cut(s) 486, 1234
BanI GGYRCC 1 cut(s) 765
BbsI GAAGAC 1 cut(s) 302
Bbv12I GWGCWC 2 cut(s) 486, 1234
BbvI GCAGC 3 cut(s) 232, 715, 718
BccI CCATC 2 cut(s) 129, 620
BceAI ACGGC 1 cut(s) 485
BciVI GTATCC 1 cut(s) 570
BcnI CCSGG 2 cut(s) 287, 288
BcoDI GTCTC 2 cut(s) 536, 1413
BfaI CTAG 3 cut(s) 117, 167, 194
BfuI GTATCC 1 cut(s) 570
BglII AGATCT 1 cut(s) 613
BisI GCNGC 4 cut(s) 218, 221, 729, 732
BlsI GCNGC 4 cut(s) 219, 222, 730, 733
BmcAI AGTACT 1 cut(s) 1328
Bme1390I CCNGG 2 cut(s) 287, 288
BmeT110I CYCGRG 1 cut(s) 286
BmiI GGNNCC 2 cut(s) 767, 1453
BmrFI CCNGG 2 cut(s) 287, 288
BmsI GCATC 5 cut(s) 52, 272, 337, 631, 778
BpiI GAAGAC 1 cut(s) 302
BpuEI CTTGAG 5 cut(s) 518, 1031, 1094, 1121, 1253
BpuMI CCSGG 2 cut(s) 287, 288
BsaI GGTCTC 1 cut(s) 1413
BsaJI CCNNGG 2 cut(s) 286, 1445
BsaXI ACNNNNNCTCC 2 cut(s) 572, 602
Bsc4I CCNNNNNNNGG 1 cut(s) 418
Bse1I ACTGG 1 cut(s) 224
Bse3DI GCAATG 1 cut(s) 40
BseDI CCNNGG 2 cut(s) 286, 1445
BseGI GGATG 2 cut(s) 67, 1213
BseLI CCNNNNNNNGG 1 cut(s) 418
BseMI GCAATG 1 cut(s) 40
BseMII CTCAG 3 cut(s) 289, 312, 854
BseNI ACTGG 1 cut(s) 224
BseRI GAGGAG 1 cut(s) 498
BseSI GKGCMC 2 cut(s) 486, 1234
BseXI GCAGC 3 cut(s) 232, 715, 718
BsgI GTGCAG 1 cut(s) 654
BshFI GGCC 1 cut(s) 927
BshNI GGYRCC 1 cut(s) 765
BsiHKAI GWGCWC 2 cut(s) 486, 1234
BsiHKCI CYCGRG 1 cut(s) 286
BsiSI CCGG 4 cut(s) 59, 239, 287, 419
BslI CCNNNNNNNGG 1 cut(s) 418
BsmAI GTCTC 2 cut(s) 536, 1413
BsmI GAATGC 1 cut(s) 856
BsnI GGCC 1 cut(s) 927
Bso31I GGTCTC 1 cut(s) 1413
BsoBI CYCGRG 1 cut(s) 286
Bsp1286I GDGCHC 2 cut(s) 486, 1234
Bsp1407I TGTACA 1 cut(s) 1216
Bsp143I GATC 3 cut(s) 45, 613, 934
BspACI CCGC 2 cut(s) 218, 412
BspANI GGCC 1 cut(s) 927
BspCNI CTCAG 3 cut(s) 288, 313, 855
BspLI GGNNCC 2 cut(s) 767, 1453
BspPI GGATC 1 cut(s) 53
BspT107I GGYRCC 1 cut(s) 765
BspTNI GGTCTC 1 cut(s) 1413
BsrDI GCAATG 1 cut(s) 40
BsrGI TGTACA 1 cut(s) 1216
BsrI ACTGG 1 cut(s) 224
BssECI CCNNGG 2 cut(s) 286, 1445
BssMI GATC 3 cut(s) 45, 613, 934
BssT1I CCWWGG 1 cut(s) 1445
Bst4CI ACNGT 6 cut(s) 255, 577, 911, 985, 1276, 1407
Bst6I CTCTTC 2 cut(s) 24, 798
BstAUI TGTACA 1 cut(s) 1216
BstC8I GCNNGC 2 cut(s) 416, 947
BstDEI CTNAG 5 cut(s) 275, 321, 395, 863, 886
BstF5I GGATG 2 cut(s) 67, 1213
BstKTI GATC 3 cut(s) 48, 616, 937
BstMAI GTCTC 2 cut(s) 536, 1413
BstMBI GATC 3 cut(s) 45, 613, 934
BstMWI GCNNNNNNNGC 3 cut(s) 30, 411, 725
BstNSI RCATGY 2 cut(s) 548, 1464
BstSCI CCNGG 2 cut(s) 285, 286
BstSLI GKGCMC 2 cut(s) 486, 1234
BstV1I GCAGC 3 cut(s) 232, 715, 718
BstV2I GAAGAC 1 cut(s) 302
BstX2I RGATCY 1 cut(s) 613
BstYI RGATCY 1 cut(s) 613
BsuI GTATCC 1 cut(s) 570
BsuRI GGCC 1 cut(s) 927
BtsCI GGATG 2 cut(s) 67, 1213
BtsI GCAGTG 1 cut(s) 360
BtsIMutI CAGTG 6 cut(s) 55, 360, 582, 709, 787, 1387
Cac8I GCNNGC 2 cut(s) 416, 947
CaiI CAGNNNCTG 1 cut(s) 731
Cfr9I CCCGGG 1 cut(s) 286
CseI GACGC 1 cut(s) 633
Csp6I GTAC 5 cut(s) 210, 269, 605, 1217, 1327
CviAII CATG 6 cut(s) 200, 545, 1220, 1312, 1340, 1461
CviQI GTAC 5 cut(s) 210, 269, 605, 1217, 1327
DdeI CTNAG 5 cut(s) 275, 321, 395, 863, 886
DpnI GATC 3 cut(s) 47, 615, 936
DpnII GATC 3 cut(s) 45, 613, 934
DraIII CACNNNGTG 1 cut(s) 577
Eam1104I CTCTTC 2 cut(s) 24, 798
EarI CTCTTC 2 cut(s) 24, 798
Eco130I CCWWGG 1 cut(s) 1445
Eco31I GGTCTC 1 cut(s) 1413
Eco32I GATATC 4 cut(s) 814, 1022, 1116, 1143
Eco57I CTGAAG 2 cut(s) 685, 1363
Eco88I CYCGRG 1 cut(s) 286
EcoRV GATATC 4 cut(s) 814, 1022, 1116, 1143
EcoT14I CCWWGG 1 cut(s) 1445
ErhI CCWWGG 1 cut(s) 1445
FaeI CATG 6 cut(s) 203, 548, 1223, 1315, 1343, 1464
FatI CATG 6 cut(s) 199, 544, 1219, 1311, 1339, 1460
FauI CCCGC 1 cut(s) 419
Fnu4HI GCNGC 4 cut(s) 218, 221, 729, 732
FokI GGATG 2 cut(s) 74, 1220
Fsp4HI GCNGC 4 cut(s) 218, 221, 729, 732
FspBI CTAG 3 cut(s) 117, 167, 194
GluI GCNGC 4 cut(s) 218, 221, 729, 732
HaeIII GGCC 1 cut(s) 927
HapII CCGG 4 cut(s) 59, 239, 287, 419
HgaI GACGC 1 cut(s) 633
Hin1II CATG 6 cut(s) 203, 548, 1223, 1315, 1343, 1464
HinfI GANTC 3 cut(s) 262, 430, 566
HpaII CCGG 4 cut(s) 59, 239, 287, 419
HphI GGTGA 4 cut(s) 1110, 1137, 1345, 1372
Hpy166II GTNNAC 4 cut(s) 269, 484, 907, 1232
Hpy188I TCNGA 3 cut(s) 435, 864, 1479
Hpy188III TCNNGA 8 cut(s) 167, 563, 800, 874, 1010, 1111, 1138, 1270
Hpy8I GTNNAC 4 cut(s) 269, 484, 907, 1232
HpyAV CCTTC 1 cut(s) 603
HpyCH4III ACNGT 6 cut(s) 255, 577, 911, 985, 1276, 1407
HpyCH4IV ACGT 2 cut(s) 181, 1027
HpyF10VI GCNNNNNNNGC 3 cut(s) 30, 411, 725
HpyF3I CTNAG 5 cut(s) 275, 321, 395, 863, 886
HpySE526I ACGT 2 cut(s) 181, 1027
Hsp92II CATG 6 cut(s) 203, 548, 1223, 1315, 1343, 1464
Kzo9I GATC 3 cut(s) 45, 613, 934
LmnI GCTCC 3 cut(s) 796, 997, 1060
Lsp1109I GCAGC 3 cut(s) 232, 715, 718
LweI GCATC 5 cut(s) 52, 272, 337, 631, 778
MaeI CTAG 3 cut(s) 117, 167, 194
MaeII ACGT 2 cut(s) 181, 1027
MaeIII GTNAC 5 cut(s) 502, 547, 965, 1360, 1401
MalI GATC 3 cut(s) 47, 615, 936
MboI GATC 3 cut(s) 45, 613, 934
MboII GAAGA 7 cut(s) 11, 302, 623, 650, 815, 859, 1154
MfeI CAATTG 1 cut(s) 1091
MflI RGATCY 1 cut(s) 613
MhlI GDGCHC 2 cut(s) 486, 1234
MroXI GAANNNNTTC 2 cut(s) 390, 918
MseI TTAA 1 cut(s) 1041
MslI CAYNNNNRTG 3 cut(s) 133, 1316, 1380
MspA1I CMGCKG 1 cut(s) 728
MspI CCGG 4 cut(s) 59, 239, 287, 419
MspR9I CCNGG 2 cut(s) 287, 288
MunI CAATTG 1 cut(s) 1091
Mva1269I GAATGC 1 cut(s) 856
MwoI GCNNNNNNNGC 3 cut(s) 30, 411, 725
NciI CCSGG 2 cut(s) 287, 288
NdeII GATC 3 cut(s) 45, 613, 934
NlaIII CATG 6 cut(s) 203, 548, 1223, 1315, 1343, 1464
NlaIV GGNNCC 2 cut(s) 767, 1453
NmuCI GTSAC 2 cut(s) 1360, 1401
NspI RCATGY 2 cut(s) 548, 1464
OliI CACNNNNGTG 1 cut(s) 1380
PciI ACATGT 2 cut(s) 544, 1460
PctI GAATGC 1 cut(s) 856
PdmI GAANNNNTTC 2 cut(s) 390, 918
PfeI GAWTC 3 cut(s) 262, 430, 566
PkrI GCNGC 4 cut(s) 219, 222, 730, 733
PscI ACATGT 2 cut(s) 544, 1460
PspN4I GGNNCC 2 cut(s) 767, 1453
PstNI CAGNNNCTG 1 cut(s) 731
PsuI RGATCY 1 cut(s) 613
PvuII CAGCTG 1 cut(s) 728
RsaI GTAC 5 cut(s) 211, 270, 606, 1218, 1328
RsaNI GTAC 5 cut(s) 210, 269, 605, 1217, 1327
RseI CAYNNNNRTG 3 cut(s) 133, 1316, 1380
SaqAI TTAA 1 cut(s) 1041
SatI GCNGC 4 cut(s) 218, 221, 729, 732
Sau3AI GATC 3 cut(s) 45, 613, 934
ScaI AGTACT 1 cut(s) 1328
ScrFI CCNGG 2 cut(s) 287, 288
SduI GDGCHC 2 cut(s) 486, 1234
SfaNI GCATC 5 cut(s) 52, 272, 337, 631, 778
SmaI CCCGGG 1 cut(s) 288
SmiMI CAYNNNNRTG 3 cut(s) 133, 1316, 1380
SmlI CTYRAG 5 cut(s) 533, 1010, 1109, 1136, 1268
SmoI CTYRAG 5 cut(s) 533, 1010, 1109, 1136, 1268
SsiI CCGC 2 cut(s) 218, 412
SspI AATATT 2 cut(s) 917, 1187
SspMI CTAG 3 cut(s) 117, 167, 194
StyD4I CCNGG 2 cut(s) 285, 286
StyI CCWWGG 1 cut(s) 1445
TaaI ACNGT 6 cut(s) 255, 577, 911, 985, 1276, 1407
TaiI ACGT 2 cut(s) 184, 1030
TaqI TCGA 4 cut(s) 174, 280, 1081, 1427
TatI WGTACW 4 cut(s) 268, 604, 1216, 1326
TauI GCSGC 1 cut(s) 220
TfiI GAWTC 3 cut(s) 262, 430, 566
Tru1I TTAA 1 cut(s) 1041
Tru9I TTAA 1 cut(s) 1041
TscAI CASTG 6 cut(s) 55, 367, 582, 709, 787, 1387
TseFI GTSAC 2 cut(s) 1360, 1401
TseI GCWGC 3 cut(s) 220, 728, 731
Tsp45I GTSAC 2 cut(s) 1360, 1401
TspDTI ATGAA 8 cut(s) 192, 287, 344, 651, 768, 1236, 1358, 1412
TspGWI ACGGA 1 cut(s) 197
TspMI CCCGGG 1 cut(s) 286
TspRI CASTG 6 cut(s) 55, 367, 582, 709, 787, 1387
VneI GTGCAC 2 cut(s) 482, 1230
XapI RAATTY 7 cut(s) 492, 713, 771, 1123, 1238, 1430, 1472
XbaI TCTAGA 1 cut(s) 166
XceI RCATGY 2 cut(s) 548, 1464
XmaI CCCGGG 1 cut(s) 286
XmnI GAANNNNTTC 2 cut(s) 390, 918
XspI CTAG 3 cut(s) 117, 167, 194
ZrmI AGTACT 1 cut(s) 1328
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.