Rh5DG419100

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0000079
Physical Location & Seq
Reverse (-)
66671703 .. 66675734
4032 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG419100.1

Sequence Viewer

Length: 1503 bp
ATGGAGCCTCATCTGTCTTTCAAAGAGGTTTCAAATCCACAGAAGCAGAATCTATTTATCAGCAGGTTGAACGTTTGCTGTGAGATCATTGATTCTATCGATCCAGCTAAGCAAGATCTTAAGCGTGAAACATTGATTGAGCTGCATGTCGCACCATATAAGGGAAGGAAGGGCGAGTCAAATTGGGGTCTTAACACATCTAGAGAATTACAAATACTCAATCGTATCTGGAATCTTGAAGAACAGCATGCATCTAATATATCATTGGTTATAATGGGATCAATGGCAAGGGCTGAAGGAATAAACCAAGATAGGATCACACAATTACCAGATGACATTGTTTCTCACATATTCTCCTTCCTTCCTACAGTAGATGCTGTCAGGAACTCCCTTTTGTCGAAAAAATTTAACCAAGCGTGGACGAAGCTTAAAACTCTAGACTTCGACAGTGAAAGGGGATTTTGGAAGTGTAGAGGTGGAACTGCTTTTCTAACGTTTGTATCTTGTGTGCTCTACTTTCGTGATGGATCAGAGATACGTACATTCCGTCTAAAACTGTCTCGTAAACGTTATTTACCATGTGTTGGGGATTGGATTTGCACTGCTGTTAAGCGTAAAGTAGTTGAGCTTGATCTCCATCTAAACTTTGATGTATGGACTGATTTTGAGTTGCCTCCGTGCATTTTTTGGTGCAAAACACTTGAGGTTTTGAAACTGAATCTGTCCTTGGGAGATGGAACTGGTGAAGAGCTTGATGACTTTGGTACTTGCAGTTTCCAGGTCTCTGCACCGAAACTGAAGACGTTGAGAATAAGTTTGGAATCCCTATCTGAGCCTGTTGATATTCATGTAAATGCCCCACAGCTTGAAAGCCTTGATCTCCAGCGGCTTGGTTTAACTAATTGTTTTCTTGATGGGAGTGCAAACTCCCTAGTCAATGCCAGTATTACTTTCAGAGAAAAATTTGAAATAAAAGGACTGTTTGATCTTTCCAACTCTACAATGGAGCTTCTGAATCAAGTCTCTGATGTCAAATCTCTATCTGTTTCGGCTCATTGCTTGGAGGATTTGCATCTCCCTGAGAATTACTATCTCCCTTCTTTTGGTAATGTGAACCAATTGAGGCTGGCTTTTGGGGATCCCAGTTGCTGGGATTTGCTAGCTCGGTTTCTCAACAGTGCACCTAATCTTGAAATTCTTGTCTTAGACAATAGAACTGAAGGTCACAAAGAACTGTCAGAGATTGACTGGAATCCACCAGAGCAAGTGCCTAGTAGTTTATTATCAAACCTGAAGACTATCTGCTTTAAGGGGTTCAAGGGAAGGCTGTTTGAGATGGAAATGATAAAGTATCTGTTGAAGAATGGTCAACTGTTGAATAAGATGACGATTTCTACAGGCCTGCATCTTTCATATGATAGACAGAACGAGTTATACACAGAGTTTATGATGTTCCATAGGGCAGCAACTTGTCATGTTGAGTTCATGCACATGGAAGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

500

Amino Acids

57.2

Weight (kDa)

5.78

Isoelectric Point (pI)

36.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 106 - 144 1.1e-07 F-box domain
FBD PF08387 420 - 464 3.5e-13 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 272
Acc36I ACCTGC 1 cut(s) 54
AccB7I CCANNNNNTGG 2 cut(s) 584, 1149
AciI CCGC 1 cut(s) 886
AclI AACGTT 3 cut(s) 72, 494, 568
AclWI GGATC 6 cut(s) 95, 286, 323, 535, 1133, 1146
AcsI RAATTY 3 cut(s) 404, 962, 1194
AcuI CTGAAG 4 cut(s) 315, 818, 1239, 1313
AfaI GTAC 2 cut(s) 541, 766
AfiI CCNNNNNNNGG 4 cut(s) 161, 584, 1103, 1149
AflII CTTAAG 1 cut(s) 119
AjnI CCWGG 1 cut(s) 777
AjuI GAANNNNNNNTTGG 2 cut(s) 710, 742
AluBI AGCT 8 cut(s) 107, 142, 427, 628, 751, 865, 1009, 1163
AluI AGCT 8 cut(s) 107, 142, 427, 628, 751, 865, 1009, 1163
Alw21I GWGCWC 2 cut(s) 513, 1183
Alw26I GTCTC 3 cut(s) 564, 787, 1027
Alw44I GTGCAC 1 cut(s) 1179
AlwI GGATC 6 cut(s) 95, 286, 323, 535, 1133, 1146
AlwNI CAGNNNCTG 1 cut(s) 1149
AoxI GGCC 1 cut(s) 1399
ApaLI GTGCAC 1 cut(s) 1179
ApeKI GCWGC 2 cut(s) 142, 1463
ApoI RAATTY 3 cut(s) 404, 962, 1194
AsuHPI GGTGA 1 cut(s) 755
AsuNHI GCTAGC 1 cut(s) 1159
BaeGI GKGCMC 1 cut(s) 1183
BaeI ACNNNNGTAYC 2 cut(s) 483, 516
BamHI GGATCC 1 cut(s) 1138
BbsI GAAGAC 2 cut(s) 806, 1301
Bbv12I GWGCWC 2 cut(s) 513, 1183
BbvI GCAGC 2 cut(s) 129, 1475
BccI CCATC 5 cut(s) 518, 645, 728, 908, 1330
BciT130I CCWGG 1 cut(s) 779
BcoDI GTCTC 3 cut(s) 564, 787, 1027
BfaI CTAG 5 cut(s) 201, 437, 932, 1160, 1272
BfmI CTRYAG 2 cut(s) 366, 1395
BfrI CTTAAG 1 cut(s) 119
BfuAI ACCTGC 1 cut(s) 54
BglII AGATCT 1 cut(s) 115
BisI GCNGC 3 cut(s) 143, 887, 1464
BlpI GCTNAGC 1 cut(s) 108
BlsI GCNGC 3 cut(s) 144, 888, 1465
Bme1390I CCNGG 1 cut(s) 779
BmiI GGNNCC 2 cut(s) 6, 1140
BmrFI CCNGG 1 cut(s) 779
BmrI ACTGGG 1 cut(s) 1137
BmsI GCATC 4 cut(s) 260, 364, 1081, 1414
BmtI GCTAGC 1 cut(s) 1163
BmuI ACTGGG 1 cut(s) 1137
BpiI GAAGAC 2 cut(s) 806, 1301
BpmI CTGGAG 1 cut(s) 866
Bpu1102I GCTNAGC 1 cut(s) 108
BpuEI CTTGAG 1 cut(s) 722
Bsa29I ATCGAT 1 cut(s) 99
BsaAI YACGTR 1 cut(s) 539
BsaBI GATNNNNATC 2 cut(s) 636, 1071
BsaI GGTCTC 1 cut(s) 787
BsaJI CCNNGG 1 cut(s) 726
BsaXI ACNNNNNCTCC 2 cut(s) 338, 368
Bsc4I CCNNNNNNNGG 4 cut(s) 161, 584, 1103, 1149
Bse1I ACTGG 4 cut(s) 745, 942, 1143, 1253
Bse3DI GCAATG 1 cut(s) 1054
Bse8I GATNNNNATC 2 cut(s) 636, 1071
BseBI CCWGG 1 cut(s) 779
BseCI ATCGAT 1 cut(s) 99
BseDI CCNNGG 1 cut(s) 726
BseJI GATNNNNATC 2 cut(s) 636, 1071
BseLI CCNNNNNNNGG 4 cut(s) 161, 584, 1103, 1149
BseMI GCAATG 1 cut(s) 1054
BseMII CTCAG 2 cut(s) 822, 1071
BseNI ACTGG 4 cut(s) 745, 942, 1143, 1253
BseSI GKGCMC 1 cut(s) 1183
BseXI GCAGC 2 cut(s) 129, 1475
BseYI CCCAGC 1 cut(s) 1149
BsgI GTGCAG 1 cut(s) 771
BshFI GGCC 1 cut(s) 1401
BshVI ATCGAT 1 cut(s) 99
BsiHKAI GWGCWC 2 cut(s) 513, 1183
BslI CCNNNNNNNGG 4 cut(s) 161, 584, 1103, 1149
BsmAI GTCTC 3 cut(s) 564, 787, 1027
BsnI GGCC 1 cut(s) 1401
Bso31I GGTCTC 1 cut(s) 787
Bsp1286I GDGCHC 2 cut(s) 513, 1183
Bsp1720I GCTNAGC 1 cut(s) 108
BspACI CCGC 1 cut(s) 886
BspANI GGCC 1 cut(s) 1401
BspCNI CTCAG 2 cut(s) 823, 1072
BspDI ATCGAT 1 cut(s) 99
BspLI GGNNCC 2 cut(s) 6, 1140
BspMI ACCTGC 1 cut(s) 54
BspOI GCTAGC 1 cut(s) 1163
BspPI GGATC 6 cut(s) 95, 286, 323, 535, 1133, 1146
BspQI GCTCTTC 1 cut(s) 741
BspTI CTTAAG 1 cut(s) 119
BspTNI GGTCTC 1 cut(s) 787
BsrDI GCAATG 1 cut(s) 1054
BsrI ACTGG 4 cut(s) 745, 942, 1143, 1253
BssECI CCNNGG 1 cut(s) 726
BssT1I CCWWGG 1 cut(s) 726
Bst2UI CCWGG 1 cut(s) 779
Bst4CI ACNGT 7 cut(s) 370, 449, 558, 981, 1178, 1236, 1374
Bst6I CTCTTC 1 cut(s) 741
BstAFI CTTAAG 1 cut(s) 119
BstBAI YACGTR 1 cut(s) 539
BstC8I GCNNGC 4 cut(s) 249, 1128, 1161, 1403
BstDEI CTNAG 4 cut(s) 108, 831, 1080, 1204
BstMAI GTCTC 3 cut(s) 564, 787, 1027
BstNI CCWGG 1 cut(s) 779
BstNSI RCATGY 2 cut(s) 149, 251
BstSCI CCNGG 1 cut(s) 777
BstSFI CTRYAG 2 cut(s) 366, 1395
BstSLI GKGCMC 1 cut(s) 1183
BstSNI TACGTA 1 cut(s) 539
BstV1I GCAGC 2 cut(s) 129, 1475
BstV2I GAAGAC 2 cut(s) 806, 1301
BstX2I RGATCY 2 cut(s) 115, 1138
BstXI CCANNNNNNTGG 1 cut(s) 890
BstYI RGATCY 2 cut(s) 115, 1138
Bsu15I ATCGAT 1 cut(s) 99
BsuRI GGCC 1 cut(s) 1401
BsuTUI ATCGAT 1 cut(s) 99
BtsI GCAGTG 1 cut(s) 600
BtsIMutI CAGTG 3 cut(s) 454, 600, 1183
BveI ACCTGC 1 cut(s) 54
Cac8I GCNNGC 4 cut(s) 249, 1128, 1161, 1403
CaiI CAGNNNCTG 1 cut(s) 1149
ClaI ATCGAT 1 cut(s) 99
Csp6I GTAC 2 cut(s) 540, 765
CviAII CATG 7 cut(s) 146, 248, 579, 848, 1475, 1486, 1492
CviQI GTAC 2 cut(s) 540, 765
DdeI CTNAG 4 cut(s) 108, 831, 1080, 1204
Eam1104I CTCTTC 1 cut(s) 741
EarI CTCTTC 1 cut(s) 741
Eco105I TACGTA 1 cut(s) 539
Eco130I CCWWGG 1 cut(s) 726
Eco147I AGGCCT 1 cut(s) 1401
Eco31I GGTCTC 1 cut(s) 787
Eco57I CTGAAG 4 cut(s) 315, 818, 1239, 1313
EcoRII CCWGG 1 cut(s) 777
EcoT14I CCWWGG 1 cut(s) 726
EcoT22I ATGCAT 1 cut(s) 253
ErhI CCWWGG 1 cut(s) 726
FaeI CATG 7 cut(s) 149, 251, 582, 851, 1478, 1489, 1495
FatI CATG 7 cut(s) 145, 247, 578, 847, 1474, 1485, 1491
FauNDI CATATG 1 cut(s) 1414
Fnu4HI GCNGC 3 cut(s) 143, 887, 1464
Fsp4HI GCNGC 3 cut(s) 143, 887, 1464
FspBI CTAG 5 cut(s) 201, 437, 932, 1160, 1272
GluI GCNGC 3 cut(s) 143, 887, 1464
GsaI CCCAGC 1 cut(s) 1153
GsuI CTGGAG 1 cut(s) 866
HaeIII GGCC 1 cut(s) 1401
Hin1II CATG 7 cut(s) 149, 251, 582, 851, 1478, 1489, 1495
HincII GTYRAC 1 cut(s) 1370
HindII GTYRAC 1 cut(s) 1370
HindIII AAGCTT 1 cut(s) 425
HinfI GANTC 8 cut(s) 49, 92, 176, 232, 718, 821, 1015, 1252
HphI GGTGA 1 cut(s) 755
Hpy166II GTNNAC 5 cut(s) 420, 566, 1114, 1181, 1370
Hpy188I TCNGA 6 cut(s) 532, 832, 956, 1014, 1027, 1240
Hpy188III TCNNGA 8 cut(s) 201, 229, 236, 382, 437, 521, 911, 1190
Hpy8I GTNNAC 5 cut(s) 420, 566, 1114, 1181, 1370
HpyAV CCTTC 8 cut(s) 159, 163, 290, 367, 371, 1107, 1214, 1317
HpyCH4III ACNGT 7 cut(s) 370, 449, 558, 981, 1178, 1236, 1374
HpyCH4IV ACGT 5 cut(s) 72, 494, 538, 568, 803
HpyF3I CTNAG 4 cut(s) 108, 831, 1080, 1204
HpySE526I ACGT 5 cut(s) 72, 494, 538, 568, 803
Hsp92II CATG 7 cut(s) 149, 251, 582, 851, 1478, 1489, 1495
LguI GCTCTTC 1 cut(s) 741
LmnI GCTCC 2 cut(s) 4, 1006
Lsp1109I GCAGC 2 cut(s) 129, 1475
LweI GCATC 4 cut(s) 260, 364, 1081, 1414
MaeI CTAG 5 cut(s) 201, 437, 932, 1160, 1272
MaeII ACGT 5 cut(s) 72, 494, 538, 568, 803
MaeIII GTNAC 1 cut(s) 1223
MboII GAAGA 5 cut(s) 251, 758, 811, 1306, 1372
MfeI CAATTG 1 cut(s) 1118
MflI RGATCY 2 cut(s) 115, 1138
MhlI GDGCHC 2 cut(s) 513, 1183
MluCI AATT 9 cut(s) 181, 206, 323, 404, 901, 962, 1084, 1118, 1194
MlyI GAGTC 1 cut(s) 185
MmeI TCCRAC 1 cut(s) 1017
MnlI CCTC 7 cut(s) 18, 19, 467, 684, 697, 1057, 1116
Mph1103I ATGCAT 1 cut(s) 253
MseI TTAA 7 cut(s) 120, 192, 408, 429, 609, 896, 1308
MslI CAYNNNNRTG 2 cut(s) 852, 1490
MspA1I CMGCKG 1 cut(s) 886
MspCI CTTAAG 1 cut(s) 119
MspR9I CCNGG 1 cut(s) 779
MunI CAATTG 1 cut(s) 1118
MvaI CCWGG 1 cut(s) 779
NdeI CATATG 1 cut(s) 1414
NheI GCTAGC 1 cut(s) 1159
NlaIII CATG 7 cut(s) 149, 251, 582, 851, 1478, 1489, 1495
NlaIV GGNNCC 2 cut(s) 6, 1140
NmuCI GTSAC 1 cut(s) 1223
NsiI ATGCAT 1 cut(s) 253
NspI RCATGY 2 cut(s) 149, 251
PaeI GCATGC 1 cut(s) 251
PceI AGGCCT 1 cut(s) 1401
PciSI GCTCTTC 1 cut(s) 741
PcsI WCGNNNNNNNCGW 1 cut(s) 544
PfeI GAWTC 7 cut(s) 49, 92, 232, 718, 821, 1015, 1252
PflMI CCANNNNNTGG 2 cut(s) 584, 1149
PkrI GCNGC 3 cut(s) 144, 888, 1465
PleI GAGTC 1 cut(s) 184
PpsI GAGTC 1 cut(s) 184
Ppu21I YACGTR 1 cut(s) 539
PsiI TTATAA 1 cut(s) 272
Psp1406I AACGTT 3 cut(s) 72, 494, 568
Psp6I CCWGG 1 cut(s) 777
PspFI CCCAGC 1 cut(s) 1149
PspGI CCWGG 1 cut(s) 777
PspN4I GGNNCC 2 cut(s) 6, 1140
PsrI GAACNNNNNNTAC 2 cut(s) 1418, 1450
PstNI CAGNNNCTG 1 cut(s) 1149
PsuI RGATCY 2 cut(s) 115, 1138
RsaI GTAC 2 cut(s) 541, 766
RsaNI GTAC 2 cut(s) 540, 765
RseI CAYNNNNRTG 2 cut(s) 852, 1490
SapI GCTCTTC 1 cut(s) 741
SaqAI TTAA 7 cut(s) 120, 192, 408, 429, 609, 896, 1308
SatI GCNGC 3 cut(s) 143, 887, 1464
SchI GAGTC 1 cut(s) 185
ScrFI CCNGG 1 cut(s) 779
SduI GDGCHC 2 cut(s) 513, 1183
SfaNI GCATC 4 cut(s) 260, 364, 1081, 1414
SfcI CTRYAG 2 cut(s) 366, 1395
SmiMI CAYNNNNRTG 2 cut(s) 852, 1490
SmlI CTYRAG 2 cut(s) 119, 701
SmoI CTYRAG 2 cut(s) 119, 701
SnaBI TACGTA 1 cut(s) 539
SphI GCATGC 1 cut(s) 251
Sse9I AATT 9 cut(s) 181, 206, 323, 404, 901, 962, 1084, 1118, 1194
SseBI AGGCCT 1 cut(s) 1401
SsiI CCGC 1 cut(s) 886
SspMI CTAG 5 cut(s) 201, 437, 932, 1160, 1272
StuI AGGCCT 1 cut(s) 1401
StyD4I CCNGG 1 cut(s) 777
StyI CCWWGG 1 cut(s) 726
TaaI ACNGT 7 cut(s) 370, 449, 558, 981, 1178, 1236, 1374
TaiI ACGT 5 cut(s) 75, 497, 541, 571, 806
TaqI TCGA 3 cut(s) 99, 398, 444
TasI AATT 9 cut(s) 181, 206, 323, 404, 901, 962, 1084, 1118, 1194
TauI GCSGC 1 cut(s) 889
TfiI GAWTC 7 cut(s) 49, 92, 232, 718, 821, 1015, 1252
Tru1I TTAA 7 cut(s) 120, 192, 408, 429, 609, 896, 1308
Tru9I TTAA 7 cut(s) 120, 192, 408, 429, 609, 896, 1308
TscAI CASTG 3 cut(s) 454, 607, 1183
TseFI GTSAC 1 cut(s) 1223
TseI GCWGC 2 cut(s) 142, 1463
Tsp45I GTSAC 1 cut(s) 1223
TspDTI ATGAA 3 cut(s) 836, 1401, 1474
TspGWI ACGGA 2 cut(s) 536, 666
TspRI CASTG 3 cut(s) 454, 607, 1183
Van91I CCANNNNNTGG 2 cut(s) 584, 1149
Vha464I CTTAAG 1 cut(s) 119
VneI GTGCAC 1 cut(s) 1179
XapI RAATTY 3 cut(s) 404, 962, 1194
XbaI TCTAGA 2 cut(s) 200, 436
XceI RCATGY 2 cut(s) 149, 251
XcmI CCANNNNNNNNNTGG 1 cut(s) 1000
XspI CTAG 5 cut(s) 201, 437, 932, 1160, 1272
Zsp2I ATGCAT 1 cut(s) 253
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.