Rh5AG391100

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0000079
Physical Location & Seq
Reverse (-)
67758848 .. 67760379
1532 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG391100.1

Sequence Viewer

Length: 978 bp
ATGCCCTATCCCCAGTATATACCTCATATTGAGGACTGGGTTTTCACTGCTGTTATCCGAAATGTTGTCGAGCTTGATCTTCATGTTTTTGAAACTGGGGTTGATGTTTTTGTGTTACCTGAGCGCATTTATTGGTGCAAAACGCTGAGGGTTTTGAAACTCCATCTGACGCCCTGGACGCGCACCGATGATCCTCCTGCATCCGGCTGTTTCGCAAGTCTCAAGTTTCTCCATGTATCAGTTTATAATCCTCAGGAAACAACTATGAATTTGCTTTTCTCTTGCTGCCCCGTACTTGAAGGTTTGACAATAGATGGAACCATTGATGGGAACACTGGTGATCACGTGAATTACAATTTCAAGGTCTCTGCACTGGAACTGAAGACATTGAGGATAAGTTTGGAAAATATATATGAGCCTGTCGATGTTCATATTAATGCCCCTAAGCTTGAAAACCTTGATCTGAAGCGTCTTGGTTTGACCAACTGTTTTCTTATTGGGAGTACAAAATCCCTAGTCAATGCCACTCATTGCTTGGAGGACTTGCATCTCCCTGAGGATTGGCATCTCCCTGTTTTTCATAATGTGAACCAATTGAGGCTGGCTTTTTGGGGTCACAATTTGTTGGAATTGTTAGCTGTTTTTCTCAATCGTGCACCTACTCTGGAAGATCTTGTCTTAGAAGATAGAACTGAAGGTTACACAGAACTGTCAGAGAGTCACTGGAATCCACCAGAGGAGGTGCCTGCTGGTTTATCATCAAACCTGAGGACCATCTCCTTAAAGGGATTCAAGGGAAGGCTGTTTGAGATGGAAATGATAAAGTATCTGTTGAAGAATGGTCAACTGTTGAATAAGATGACGATTTCTACAAGTCTGCATCTTTCGTATGATAGACAGAATGAGTTATACACAGAGTTTATGATGTTCCATAGGACAGCAACTTGTCATGTTGAGTTTGTGCACATGCAAGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

325

Amino Acids

37.45

Weight (kDa)

5.54

Isoelectric Point (pI)

36.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At5g56370 PF24758 11 - 110 1.6e-10 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 245 - 289 6e-11 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 246
AccB1I GGYRCC 1 cut(s) 742
AccII CGCG 1 cut(s) 181
AclWI GGATC 1 cut(s) 185
AcsI RAATTY 1 cut(s) 268
AcuI CTGAAG 3 cut(s) 401, 485, 714
AcvI CACGTG 1 cut(s) 346
AcyI GRCGYC 1 cut(s) 170
AfaI GTAC 2 cut(s) 294, 505
AfiI CCNNNNNNNGG 2 cut(s) 203, 327
AgsI TTSAA 8 cut(s) 92, 157, 299, 361, 452, 793, 835, 853
AjnI CCWGG 1 cut(s) 173
AluBI AGCT 3 cut(s) 73, 448, 638
AluI AGCT 3 cut(s) 73, 448, 638
Alw21I GWGCWC 2 cut(s) 658, 966
Alw26I GTCTC 2 cut(s) 224, 370
Alw44I GTGCAC 2 cut(s) 654, 962
AlwI GGATC 1 cut(s) 185
ApaLI GTGCAC 2 cut(s) 654, 962
ApeKI GCWGC 1 cut(s) 285
ApoI RAATTY 1 cut(s) 268
AseI ATTAAT 1 cut(s) 435
AspLEI GCGC 2 cut(s) 126, 183
AspS9I GGNCC 1 cut(s) 771
AsuHPI GGTGA 1 cut(s) 350
AvaII GGWCC 1 cut(s) 771
AxyI CCTNAGG 3 cut(s) 252, 555, 767
BaeGI GKGCMC 2 cut(s) 658, 966
BanI GGYRCC 1 cut(s) 742
BbrPI CACGTG 1 cut(s) 346
BbsI GAAGAC 1 cut(s) 389
Bbv12I GWGCWC 2 cut(s) 658, 966
BbvCI CCTCAGC 1 cut(s) 146
BbvI GCAGC 1 cut(s) 272
BccI CCATC 5 cut(s) 171, 308, 320, 782, 805
BciT130I CCWGG 1 cut(s) 175
BclI TGATCA 1 cut(s) 340
BcoDI GTCTC 2 cut(s) 224, 370
BfaI CTAG 1 cut(s) 515
BglII AGATCT 1 cut(s) 670
BisI GCNGC 1 cut(s) 286
BlsI GCNGC 1 cut(s) 287
Bme1390I CCNGG 1 cut(s) 175
Bme18I GGWCC 1 cut(s) 771
BmgT120I GGNCC 1 cut(s) 771
BmiI GGNNCC 2 cut(s) 319, 744
BmrFI CCNGG 1 cut(s) 175
BmrI ACTGGG 3 cut(s) 7, 46, 105
BmsI GCATC 4 cut(s) 209, 556, 574, 889
BmuI ACTGGG 3 cut(s) 7, 46, 105
BpiI GAAGAC 1 cut(s) 389
Bpu10I CCTNAGC 3 cut(s) 120, 146, 444
BpuEI CTTGAG 1 cut(s) 206
BsaAI YACGTR 1 cut(s) 346
BsaBI GATNNNNATC 1 cut(s) 564
BsaHI GRCGYC 1 cut(s) 170
BsaI GGTCTC 1 cut(s) 370
BsaJI CCNNGG 1 cut(s) 173
Bsc4I CCNNNNNNNGG 2 cut(s) 203, 327
Bse1I ACTGG 6 cut(s) 13, 41, 100, 340, 378, 728
Bse21I CCTNAGG 3 cut(s) 252, 555, 767
Bse3DI GCAATG 1 cut(s) 529
Bse8I GATNNNNATC 1 cut(s) 564
BseBI CCWGG 1 cut(s) 175
BseDI CCNNGG 1 cut(s) 173
BseGI GGATG 1 cut(s) 200
BseJI GATNNNNATC 1 cut(s) 564
BseLI CCNNNNNNNGG 2 cut(s) 203, 327
BseMI GCAATG 1 cut(s) 529
BseMII CTCAG 5 cut(s) 111, 137, 266, 546, 758
BseNI ACTGG 6 cut(s) 13, 41, 100, 340, 378, 728
BseRI GAGGAG 1 cut(s) 752
BseSI GKGCMC 2 cut(s) 658, 966
BseXI GCAGC 1 cut(s) 272
BsgI GTGCAG 1 cut(s) 354
Bsh1236I CGCG 1 cut(s) 181
BshNI GGYRCC 1 cut(s) 742
BsiHKAI GWGCWC 2 cut(s) 658, 966
BsiSI CCGG 1 cut(s) 204
BslI CCNNNNNNNGG 2 cut(s) 203, 327
BsmAI GTCTC 2 cut(s) 224, 370
Bso31I GGTCTC 1 cut(s) 370
Bsp1286I GDGCHC 2 cut(s) 658, 966
Bsp143I GATC 5 cut(s) 76, 190, 340, 460, 670
BspCNI CTCAG 5 cut(s) 112, 138, 265, 547, 759
BspFNI CGCG 1 cut(s) 181
BspLI GGNNCC 2 cut(s) 319, 744
BspPI GGATC 1 cut(s) 185
BspT107I GGYRCC 1 cut(s) 742
BspTNI GGTCTC 1 cut(s) 370
BsrDI GCAATG 1 cut(s) 529
BsrI ACTGG 6 cut(s) 13, 41, 100, 340, 378, 728
BssECI CCNNGG 1 cut(s) 173
BssMI GATC 5 cut(s) 76, 190, 340, 460, 670
BssNI GRCGYC 1 cut(s) 170
Bst2UI CCWGG 1 cut(s) 175
Bst4CI ACNGT 3 cut(s) 488, 711, 849
BstACI GRCGYC 1 cut(s) 170
BstBAI YACGTR 1 cut(s) 346
BstC8I GCNNGC 2 cut(s) 603, 747
BstDEI CTNAG 7 cut(s) 120, 146, 252, 444, 555, 679, 767
BstF5I GGATG 1 cut(s) 200
BstFNI CGCG 1 cut(s) 181
BstHHI GCGC 2 cut(s) 126, 183
BstKTI GATC 5 cut(s) 79, 193, 343, 463, 673
BstMAI GTCTC 2 cut(s) 224, 370
BstMBI GATC 5 cut(s) 76, 190, 340, 460, 670
BstMWI GCNNNNNNNGC 1 cut(s) 178
BstNI CCWGG 1 cut(s) 175
BstNSI RCATGY 1 cut(s) 970
BstSCI CCNGG 1 cut(s) 173
BstSLI GKGCMC 2 cut(s) 658, 966
BstUI CGCG 1 cut(s) 181
BstV1I GCAGC 1 cut(s) 272
BstV2I GAAGAC 1 cut(s) 389
BstX2I RGATCY 1 cut(s) 670
BstYI RGATCY 1 cut(s) 670
Bsu36I CCTNAGG 3 cut(s) 252, 555, 767
BtsCI GGATG 1 cut(s) 200
BtsI GCAGTG 1 cut(s) 45
BtsIMutI CAGTG 4 cut(s) 45, 333, 371, 721
Cac8I GCNNGC 2 cut(s) 603, 747
CfoI GCGC 2 cut(s) 126, 183
Cfr13I GGNCC 1 cut(s) 771
CseI GACGC 3 cut(s) 178, 187, 458
Csp6I GTAC 2 cut(s) 293, 504
CviAII CATG 4 cut(s) 83, 233, 950, 967
CviJI RGCY 8 cut(s) 73, 207, 418, 448, 601, 605, 638, 802
CviKI_1 RGCY 8 cut(s) 73, 207, 418, 448, 601, 605, 638, 802
CviQI GTAC 2 cut(s) 293, 504
DdeI CTNAG 7 cut(s) 120, 146, 252, 444, 555, 679, 767
DpnI GATC 5 cut(s) 78, 192, 342, 462, 672
DpnII GATC 5 cut(s) 76, 190, 340, 460, 670
Eco31I GGTCTC 1 cut(s) 370
Eco47I GGWCC 1 cut(s) 771
Eco57I CTGAAG 3 cut(s) 401, 485, 714
Eco72I CACGTG 1 cut(s) 346
Eco81I CCTNAGG 3 cut(s) 252, 555, 767
EcoRII CCWGG 1 cut(s) 173
FaeI CATG 4 cut(s) 86, 236, 953, 970
FatI CATG 4 cut(s) 82, 232, 949, 966
FbaI TGATCA 1 cut(s) 340
Fnu4HI GCNGC 1 cut(s) 286
FokI GGATG 1 cut(s) 187
Fsp4HI GCNGC 1 cut(s) 286
FspBI CTAG 1 cut(s) 515
GlaI GCGC 2 cut(s) 125, 182
GluI GCNGC 1 cut(s) 286
HapII CCGG 1 cut(s) 204
HgaI GACGC 3 cut(s) 178, 187, 458
HhaI GCGC 2 cut(s) 126, 183
Hin1I GRCGYC 1 cut(s) 170
Hin1II CATG 4 cut(s) 86, 236, 953, 970
Hin6I GCGC 2 cut(s) 124, 181
HinP1I GCGC 2 cut(s) 124, 181
HincII GTYRAC 1 cut(s) 845
HindII GTYRAC 1 cut(s) 845
HindIII AAGCTT 1 cut(s) 446
HinfI GANTC 3 cut(s) 718, 727, 789
HpaII CCGG 1 cut(s) 204
HphI GGTGA 1 cut(s) 350
Hpy166II GTNNAC 4 cut(s) 589, 656, 845, 964
Hpy188I TCNGA 4 cut(s) 59, 168, 465, 715
Hpy188III TCNNGA 2 cut(s) 254, 665
Hpy8I GTNNAC 4 cut(s) 589, 656, 845, 964
HpyAV CCTTC 3 cut(s) 293, 689, 792
HpyCH4III ACNGT 3 cut(s) 488, 711, 849
HpyCH4IV ACGT 1 cut(s) 345
HpyCH4V TGCA 8 cut(s) 138, 200, 371, 547, 656, 880, 964, 970
HpyF10VI GCNNNNNNNGC 1 cut(s) 178
HpyF3I CTNAG 7 cut(s) 120, 146, 252, 444, 555, 679, 767
HpySE526I ACGT 1 cut(s) 345
Hsp92I GRCGYC 1 cut(s) 170
Hsp92II CATG 4 cut(s) 86, 236, 953, 970
HspAI GCGC 2 cut(s) 124, 181
Ksp22I TGATCA 1 cut(s) 340
Kzo9I GATC 5 cut(s) 76, 190, 340, 460, 670
Lsp1109I GCAGC 1 cut(s) 272
LweI GCATC 4 cut(s) 209, 556, 574, 889
MaeI CTAG 1 cut(s) 515
MaeII ACGT 1 cut(s) 345
MaeIII GTNAC 4 cut(s) 114, 614, 698, 719
MalI GATC 5 cut(s) 78, 192, 342, 462, 672
MboI GATC 5 cut(s) 76, 190, 340, 460, 670
MboII GAAGA 5 cut(s) 71, 394, 680, 695, 847
MfeI CAATTG 1 cut(s) 593
MflI RGATCY 1 cut(s) 670
MhlI GDGCHC 2 cut(s) 658, 966
MluCI AATT 6 cut(s) 268, 349, 355, 593, 619, 629
MlyI GAGTC 1 cut(s) 727
MmeI TCCRAC 1 cut(s) 606
MseI TTAA 2 cut(s) 435, 782
MslI CAYNNNNRTG 1 cut(s) 435
MspI CCGG 1 cut(s) 204
MspR9I CCNGG 1 cut(s) 175
MunI CAATTG 1 cut(s) 593
MvaI CCWGG 1 cut(s) 175
MvnI CGCG 1 cut(s) 181
MwoI GCNNNNNNNGC 1 cut(s) 178
NdeII GATC 5 cut(s) 76, 190, 340, 460, 670
NlaIII CATG 4 cut(s) 86, 236, 953, 970
NlaIV GGNNCC 2 cut(s) 319, 744
NmuCI GTSAC 2 cut(s) 614, 719
NspI RCATGY 1 cut(s) 970
PfeI GAWTC 2 cut(s) 727, 789
PkrI GCNGC 1 cut(s) 287
PleI GAGTC 1 cut(s) 726
PmaCI CACGTG 1 cut(s) 346
PmlI CACGTG 1 cut(s) 346
PpsI GAGTC 1 cut(s) 726
Ppu21I YACGTR 1 cut(s) 346
PshBI ATTAAT 1 cut(s) 435
PsiI TTATAA 1 cut(s) 246
Psp6I CCWGG 1 cut(s) 173
PspCI CACGTG 1 cut(s) 346
PspGI CCWGG 1 cut(s) 173
PspN4I GGNNCC 2 cut(s) 319, 744
PspPI GGNCC 1 cut(s) 771
PsuI RGATCY 1 cut(s) 670
RsaI GTAC 2 cut(s) 294, 505
RsaNI GTAC 2 cut(s) 293, 504
RseI CAYNNNNRTG 1 cut(s) 435
SaqAI TTAA 2 cut(s) 435, 782
SatI GCNGC 1 cut(s) 286
Sau3AI GATC 5 cut(s) 76, 190, 340, 460, 670
Sau96I GGNCC 1 cut(s) 771
SchI GAGTC 1 cut(s) 727
ScrFI CCNGG 1 cut(s) 175
SduI GDGCHC 2 cut(s) 658, 966
SfaNI GCATC 4 cut(s) 209, 556, 574, 889
SinI GGWCC 1 cut(s) 771
SmiMI CAYNNNNRTG 1 cut(s) 435
SmlI CTYRAG 1 cut(s) 221
SmoI CTYRAG 1 cut(s) 221
Sse9I AATT 6 cut(s) 268, 349, 355, 593, 619, 629
SspMI CTAG 1 cut(s) 515
StyD4I CCNGG 1 cut(s) 173
TaaI ACNGT 3 cut(s) 488, 711, 849
TaiI ACGT 1 cut(s) 348
TaqI TCGA 2 cut(s) 69, 423
TasI AATT 6 cut(s) 268, 349, 355, 593, 619, 629
TatI WGTACW 1 cut(s) 503
TfiI GAWTC 2 cut(s) 727, 789
Tru1I TTAA 2 cut(s) 435, 782
Tru9I TTAA 2 cut(s) 435, 782
TscAI CASTG 4 cut(s) 52, 340, 378, 728
TseFI GTSAC 2 cut(s) 614, 719
TseI GCWGC 1 cut(s) 285
Tsp45I GTSAC 2 cut(s) 614, 719
TspDTI ATGAA 4 cut(s) 71, 281, 419, 569
TspRI CASTG 4 cut(s) 52, 340, 378, 728
VneI GTGCAC 2 cut(s) 654, 962
VpaK11BI GGWCC 1 cut(s) 771
VspI ATTAAT 1 cut(s) 435
XapI RAATTY 1 cut(s) 268
XceI RCATGY 1 cut(s) 970
XcmI CCANNNNNNNNNTGG 1 cut(s) 532
XspI CTAG 1 cut(s) 515
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.