Rmu_sc0000727.1_g000033

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000727.1
OG0000079
Physical Location & Seq
Reverse (-)
150930 .. 154308
3379 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000727.1_g000033.1.cds

Sequence Viewer

Length: 2514 bp
atgatttctggagagctaaaatgccaaaagtcggctaagctttgtctttgtggcccagcccagaagggtcatggggacttgacgtcttccccacgttcgtaccaagtctcagagccaacgatggttgaaccattttcttttacagggccgccgtcgatcatatggattgcgcgttatgaccctacgcttcccagaccatggaagggtttgattgatccttccacaggttggctatatttctggaaccctgaaaccaacgttacccaatatgaaagaccatccgcccctctatatcatcatcaatttcagctgcagcaatatccatatccatggcttcctcgttacgaccggccacaactccagtactctcaccagtacccagaacctctctctacatctcatggccccatatgcgcctcaccatctattccgattgcggttcgagctccacacccggttaccgttccgatcaactacccacgatatggatccctgattggtgagaaaggtgaagatagagataggattagtgagttaccggatgaccttatttgtcacatactttcttttcttccaacaataactgccgtaaggacaactgttttgtctaaaagatggaacaagttgtggacttttgttcgccatctagacttcgacttatatagagatcggcccgatgagaataagtacctttttgagagatttgttgaatttgtatttctccgtcttgtttcactggacattggaaaatttcgtcttagatatgcctctgccagctgggaagatgatttttctcatgttgatgattgggtttctgttgccgtctggcgcaatgttgttgaacttgatcttagaaattttgatggtctttgtcgcctacctaaaagtattttctggtgcaaaaccctcaaggttttgaaactgtggatagattatataaatattcctgatcctcctacaaaagggagtttcccaaatctcaaaatcttgcatgtcacagttacaaatcctgatgacgaactgggaaaacttctttcttacttccctgtggtcgaagatttgagcatacacggacagttgacgtactcttacatttactatcacaatatcaatctcaaagtctcttttccagaactgaagacgttgaaattaagtacggaacgtgaggaaatgacagactacgaaatgggacatgattatggtggaaccctaaatcagtaccatttttgtgtcgatgccccaaagcttgaaaaccttgatcttgtacagattcctttctcaaattatattttagagaacccaaaatccgtagtcaatgccagtattgctttcaaatcccttgctgaagaagaatggtcttcctttccagaccgtgcatttcagcttcttactggaatatctaatgttaaatgcctctctctatcggatcatcctttcgaggcttcaaatctccctgtttttggtaatttgaaacaattgaagctggttcttcgtaattgtagtagctgggaatttctagcagctctgctccatagaacacccaatctggaagatctagatcttgtcttggaagatttaagttgtacgtgtaccacatattgtggattcttatttcaggaactcttattttatgctcagagaactggaggcgagaaagattatccagaactccaatggactccaccggagtttgtgcctaactgtttgtcatcacacctcaagactatctccataagaggattcaagggtctaaaatttgaaatgaaagtagtaaaatacatgttattgaatggttgtcatttgaataagatgacaatttatacaagtatgttagagaaggaagaggagtactgcagagatcttttgagctttcaaagggcgaaaattcgttttggtgatggtggcggcgagcctcgtgctctccagtccaggcagaggcgagatgacggcggcgtgggattgaagagttggtctcctctgcaatgccgtcgagatctcgaccaagattctcaaaggcttcggttgaggtgtctctcggctgaggacctgggcggctggaggtcaggttgtgatgctgcgaatgtgcagcgcttggtggcgggggcaggagggtttgtcgtgacgccggaggtggctgggcaggttcggcagttggctgggattgttttgccggtcctggaggtgactgcggtagcgggctgcgcgcaggaagggaggtcggaaaaaccggtgggaaactctatgtttgacctagggctgaccactggtttgaccgggctagatattgggctgctgactatgattgggcctgaggttgtggctggatttgggtctgatcttcatgggccgctgtctttgattgggcctgtttgtagggggctcaatttgggctttatactgcagaatttccagaagggcccgaggagcaacctgatgccgaggttgttggctactgcggaggttgagaaaggtactggttccaaccctataggggagggactagccctttcttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

837

Amino Acids

94.56

Weight (kDa)

6.14

Isoelectric Point (pI)

39.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 86
Acc36I ACCTGC 1 cut(s) 2131
AccB7I CCANNNNNTGG 3 cut(s) 198, 228, 485
AccII CGCG 2 cut(s) 172, 2204
AclI AACGTT 1 cut(s) 258
AclWI GGATC 5 cut(s) 209, 483, 496, 944, 1434
AcoI YGGCCR 1 cut(s) 350
AcsI RAATTY 7 cut(s) 710, 749, 856, 1511, 1754, 1884, 2404
AcuI CTGAAG 2 cut(s) 1157, 1365
AcyI GRCGYC 2 cut(s) 83, 2123
AfeI AGCGCT 1 cut(s) 2090
AflIII ACRYGT 2 cut(s) 1586, 1779
AgeI ACCGGT 1 cut(s) 2227
AhdI GACNNNNNGTC 1 cut(s) 82
AjnI CCWGG 3 cut(s) 1928, 2046, 2175
AloI GAACNNNNNNTCC 2 cut(s) 1289, 1321
Alw21I GWGCWC 2 cut(s) 448, 1921
Alw26I GTCTC 4 cut(s) 112, 1126, 1977, 2036
AlwI GGATC 5 cut(s) 209, 483, 496, 944, 1434
Ama87I CYCGRG 1 cut(s) 2419
Aor51HI AGCGCT 1 cut(s) 2090
AoxI GGCC 9 cut(s) 52, 146, 350, 403, 671, 2306, 2345, 2363, 2416
ApaI GGGCCC 1 cut(s) 2420
ApeKI GCWGC 7 cut(s) 310, 313, 1520, 2075, 2086, 2199, 2290
ApoI RAATTY 7 cut(s) 710, 749, 856, 1511, 1754, 1884, 2404
ArsI GACNNNNNNTTYG 4 cut(s) 586, 618, 2251, 2283
AsiGI ACCGGT 1 cut(s) 2227
AspA2I CCTAGG 1 cut(s) 2251
AspLEI GCGC 6 cut(s) 172, 416, 831, 2091, 2204, 2206
AsuC2I CCSGG 2 cut(s) 455, 2275
AsuHPI GGTGA 6 cut(s) 362, 411, 512, 521, 1907, 2194
AvaI CYCGRG 1 cut(s) 2419
AvaII GGWCC 2 cut(s) 2044, 2173
AvrII CCTAGG 1 cut(s) 2251
AxyI CCTNAGG 1 cut(s) 2310
BaeGI GKGCMC 1 cut(s) 2420
BaeI ACNNNNGTAYC 2 cut(s) 83, 116
BamHI GGATCC 1 cut(s) 488
BanII GRGCYC 3 cut(s) 448, 2382, 2420
BauI CACGAG 1 cut(s) 1914
BbsI GAAGAC 3 cut(s) 78, 1145, 1350
Bbv12I GWGCWC 2 cut(s) 448, 1921
BbvCI CCTCAGC 1 cut(s) 2040
BbvI GCAGC 7 cut(s) 297, 325, 1532, 2062, 2098, 2186, 2277
BccI CCATC 7 cut(s) 115, 286, 430, 609, 651, 857, 1892
BceAI ACGGC 5 cut(s) 136, 572, 806, 1963, 1971
BcgI CGANNNNNNTGC 4 cut(s) 1898, 1932, 1970, 2004
BciT130I CCWGG 3 cut(s) 1930, 2048, 2177
BcnI CCSGG 2 cut(s) 455, 2275
BcoDI GTCTC 4 cut(s) 112, 1126, 1977, 2036
BfaI CTAG 6 cut(s) 647, 1517, 1556, 2252, 2279, 2501
BfmI CTRYAG 4 cut(s) 311, 1852, 2399, 2487
BfoI RGCGCY 1 cut(s) 2092
BfuAI ACCTGC 1 cut(s) 2131
BglII AGATCT 4 cut(s) 1552, 1558, 1858, 1993
BlnI CCTAGG 1 cut(s) 2251
BlpI GCTNAGC 1 cut(s) 36
BmcAI AGTACT 2 cut(s) 365, 1850
Bme1390I CCNGG 5 cut(s) 455, 1930, 2048, 2177, 2275
Bme18I GGWCC 2 cut(s) 2044, 2173
BmeRI GACNNNNNGTC 1 cut(s) 82
BmeT110I CYCGRG 1 cut(s) 2419
BmiI GGNNCC 6 cut(s) 245, 406, 490, 1207, 2418, 2479
BmrFI CCNGG 5 cut(s) 455, 1930, 2048, 2177, 2275
BmrI ACTGGG 1 cut(s) 1031
BmsI GCATC 3 cut(s) 1225, 2062, 2424
BmuI ACTGGG 1 cut(s) 1031
BpiI GAAGAC 3 cut(s) 78, 1145, 1350
BplI GAGNNNNNCTC 2 cut(s) 1957, 1989
BpmI CTGGAG 6 cut(s) 30, 344, 1665, 1907, 2077, 2198
Bpu10I CCTNAGC 1 cut(s) 2040
Bpu1102I GCTNAGC 1 cut(s) 36
BpuEI CTTGAG 2 cut(s) 893, 1703
BpuMI CCSGG 2 cut(s) 455, 2275
BsaAI YACGTR 1 cut(s) 1587
BsaBI GATNNNNATC 2 cut(s) 487, 1557
BsaHI GRCGYC 2 cut(s) 83, 2123
BsaI GGTCTC 1 cut(s) 1977
BsaJI CCNNGG 6 cut(s) 197, 329, 2047, 2251, 2420, 2438
BsaWI WCCGGW 3 cut(s) 538, 1684, 2227
BsaXI ACNNNNNCTCC 4 cut(s) 2050, 2080, 2100, 2130
Bse118I RCCGGY 3 cut(s) 348, 2170, 2227
Bse21I CCTNAGG 1 cut(s) 2310
Bse3DI GCAATG 2 cut(s) 838, 1988
Bse8I GATNNNNATC 2 cut(s) 487, 1557
BseBI CCWGG 3 cut(s) 1930, 2048, 2177
BseDI CCNNGG 6 cut(s) 197, 329, 2047, 2251, 2420, 2438
BseGI GGATG 3 cut(s) 278, 547, 1429
BseJI GATNNNNATC 2 cut(s) 487, 1557
BseMI GCAATG 2 cut(s) 838, 1988
BseMII CTCAG 4 cut(s) 123, 1649, 2031, 2301
BsePI GCGCGC 1 cut(s) 2202
BseRI GAGGAG 3 cut(s) 1859, 1965, 2437
BseSI GKGCMC 1 cut(s) 2420
BseXI GCAGC 7 cut(s) 297, 325, 1532, 2062, 2098, 2186, 2277
BseYI CCCAGC 5 cut(s) 55, 777, 1506, 2135, 2156
BsgI GTGCAG 1 cut(s) 2105
Bsh1236I CGCG 2 cut(s) 172, 2204
Bsh1285I CGRYCG 1 cut(s) 349
BshFI GGCC 9 cut(s) 54, 148, 352, 405, 673, 2308, 2347, 2365, 2418
BshTI ACCGGT 1 cut(s) 2227
BsiEI CGRYCG 1 cut(s) 349
BsiHKAI GWGCWC 2 cut(s) 448, 1921
BsiHKCI CYCGRG 1 cut(s) 2419
BsiSI CCGG 8 cut(s) 349, 455, 539, 1685, 2126, 2171, 2228, 2274
BslFI GGGAC 2 cut(s) 89, 1203
BsmAI GTCTC 4 cut(s) 112, 1126, 1977, 2036
BsmFI GGGAC 2 cut(s) 89, 1203
BsnI GGCC 9 cut(s) 54, 148, 352, 405, 673, 2308, 2347, 2365, 2418
Bso31I GGTCTC 1 cut(s) 1977
BsoBI CYCGRG 1 cut(s) 2419
Bsp120I GGGCCC 1 cut(s) 2416
Bsp1286I GDGCHC 4 cut(s) 448, 1921, 2382, 2420
Bsp1407I TGTACA 1 cut(s) 1264
Bsp1720I GCTNAGC 1 cut(s) 36
Bsp19I CCATGG 2 cut(s) 197, 329
BspANI GGCC 9 cut(s) 54, 148, 352, 405, 673, 2308, 2347, 2365, 2418
BspCNI CTCAG 4 cut(s) 122, 1648, 2032, 2302
BspFNI CGCG 2 cut(s) 172, 2204
BspLI GGNNCC 6 cut(s) 245, 406, 490, 1207, 2418, 2479
BspMAI CTGCAG 3 cut(s) 315, 1856, 2403
BspMI ACCTGC 1 cut(s) 2131
BspPI GGATC 5 cut(s) 209, 483, 496, 944, 1434
BspTNI GGTCTC 1 cut(s) 1977
BsrDI GCAATG 2 cut(s) 838, 1988
BsrFI RCCGGY 3 cut(s) 348, 2170, 2227
BsrGI TGTACA 1 cut(s) 1264
BssAI RCCGGY 3 cut(s) 348, 2170, 2227
BssECI CCNNGG 6 cut(s) 197, 329, 2047, 2251, 2420, 2438
BssHII GCGCGC 1 cut(s) 2202
BssNI GRCGYC 2 cut(s) 83, 2123
BssSI CACGAG 1 cut(s) 1914
BssT1I CCWWGG 3 cut(s) 197, 329, 2251
Bst2BI CACGAG 1 cut(s) 1914
Bst2UI CCWGG 3 cut(s) 1930, 2048, 2177
Bst4CI ACNGT 7 cut(s) 463, 601, 924, 1000, 1077, 1373, 1703
Bst6I CTCTTC 2 cut(s) 1836, 1958
BstACI GRCGYC 2 cut(s) 83, 2123
BstAUI TGTACA 1 cut(s) 1264
BstBAI YACGTR 1 cut(s) 1587
BstC8I GCNNGC 4 cut(s) 775, 1910, 2197, 2204
BstDEI CTNAG 7 cut(s) 36, 109, 758, 851, 1635, 2040, 2310
BstDSI CCRYGG 2 cut(s) 197, 329
BstEII GGTNACC 1 cut(s) 457
BstENI CCTNNNNNAGG 2 cut(s) 222, 960
BstF5I GGATG 3 cut(s) 278, 547, 1429
BstFNI CGCG 2 cut(s) 172, 2204
BstH2I RGCGCY 1 cut(s) 2092
BstHHI GCGC 6 cut(s) 172, 416, 831, 2091, 2204, 2206
BstMAI GTCTC 4 cut(s) 112, 1126, 1977, 2036
BstMCI CGRYCG 1 cut(s) 349
BstMWI GCNNNNNNNGC 6 cut(s) 411, 443, 1325, 2146, 2201, 2424
BstNI CCWGG 3 cut(s) 1930, 2048, 2177
BstNSI RCATGY 2 cut(s) 995, 1783
BstPI GGTNACC 1 cut(s) 457
BstSCI CCNGG 5 cut(s) 453, 1928, 2046, 2175, 2273
BstSFI CTRYAG 4 cut(s) 311, 1852, 2399, 2487
BstSLI GKGCMC 1 cut(s) 2420
BstUI CGCG 2 cut(s) 172, 2204
BstV1I GCAGC 7 cut(s) 297, 325, 1532, 2062, 2098, 2186, 2277
BstV2I GAAGAC 3 cut(s) 78, 1145, 1350
BstX2I RGATCY 5 cut(s) 488, 1552, 1558, 1858, 1993
BstXI CCANNNNNNTGG 1 cut(s) 330
BstYI RGATCY 5 cut(s) 488, 1552, 1558, 1858, 1993
Bsu36I CCTNAGG 1 cut(s) 2310
BsuRI GGCC 9 cut(s) 54, 148, 352, 405, 673, 2308, 2347, 2365, 2418
BtgI CCRYGG 2 cut(s) 197, 329
BtsCI GGATG 3 cut(s) 278, 547, 1429
BtsIMutI CAGTG 2 cut(s) 734, 2262
BveI ACCTGC 1 cut(s) 2131
Cac8I GCNNGC 4 cut(s) 775, 1910, 2197, 2204
CfoI GCGC 6 cut(s) 172, 416, 831, 2091, 2204, 2206
Cfr10I RCCGGY 3 cut(s) 348, 2170, 2227
CseI GACGC 1 cut(s) 2131
CspAI ACCGGT 1 cut(s) 2227
CviAII CATG 9 cut(s) 71, 198, 330, 401, 797, 992, 1193, 1780, 2342
DdeI CTNAG 7 cut(s) 36, 109, 758, 851, 1635, 2040, 2310
DriI GACNNNNNGTC 1 cut(s) 82
EaeI YGGCCR 1 cut(s) 350
Eam1104I CTCTTC 2 cut(s) 1836, 1958
Eam1105I GACNNNNNGTC 1 cut(s) 82
EarI CTCTTC 2 cut(s) 1836, 1958
EciI GGCGGA 1 cut(s) 271
Ecl136II GAGCTC 1 cut(s) 446
Eco130I CCWWGG 3 cut(s) 197, 329, 2251
Eco24I GRGCYC 3 cut(s) 448, 2382, 2420
Eco31I GGTCTC 1 cut(s) 1977
Eco47I GGWCC 2 cut(s) 2044, 2173
Eco47III AGCGCT 1 cut(s) 2090
Eco53kI GAGCTC 1 cut(s) 446
Eco57I CTGAAG 2 cut(s) 1157, 1365
Eco81I CCTNAGG 1 cut(s) 2310
Eco88I CYCGRG 1 cut(s) 2419
Eco91I GGTNACC 1 cut(s) 457
EcoICRI GAGCTC 1 cut(s) 446
EcoNI CCTNNNNNAGG 2 cut(s) 222, 960
EcoO109I RGGNCCY 2 cut(s) 2044, 2416
EcoO65I GGTNACC 1 cut(s) 457
EcoRII CCWGG 3 cut(s) 1928, 2046, 2175
EcoT14I CCWWGG 3 cut(s) 197, 329, 2251
EcoT38I GRGCYC 3 cut(s) 448, 2382, 2420
ErhI CCWWGG 3 cut(s) 197, 329, 2251
FaeI CATG 9 cut(s) 74, 201, 333, 404, 800, 995, 1196, 1783, 2345
FaqI GGGAC 2 cut(s) 89, 1203
FatI CATG 9 cut(s) 70, 197, 329, 400, 796, 991, 1192, 1779, 2341
FauI CCCGC 2 cut(s) 2092, 2188
FauNDI CATATG 2 cut(s) 161, 410
FokI GGATG 3 cut(s) 265, 554, 1416
FriOI GRGCYC 3 cut(s) 448, 2382, 2420
FspBI CTAG 6 cut(s) 647, 1517, 1556, 2252, 2279, 2501
GlaI GCGC 6 cut(s) 171, 415, 830, 2090, 2203, 2205
GsaI CCCAGC 5 cut(s) 59, 781, 1510, 2139, 2160
GsuI CTGGAG 6 cut(s) 30, 344, 1665, 1907, 2077, 2198
HaeII RGCGCY 1 cut(s) 2092
HaeIII GGCC 9 cut(s) 54, 148, 352, 405, 673, 2308, 2347, 2365, 2418
HapII CCGG 8 cut(s) 349, 455, 539, 1685, 2126, 2171, 2228, 2274
HgaI GACGC 1 cut(s) 2131
HhaI GCGC 6 cut(s) 172, 416, 831, 2091, 2204, 2206
Hin1I GRCGYC 2 cut(s) 83, 2123
Hin1II CATG 9 cut(s) 74, 201, 333, 404, 800, 995, 1196, 1783, 2345
Hin6I GCGC 6 cut(s) 170, 414, 829, 2089, 2202, 2204
HinP1I GCGC 6 cut(s) 170, 414, 829, 2089, 2202, 2204
HincII GTYRAC 1 cut(s) 1080
HindII GTYRAC 1 cut(s) 1080
HindIII AAGCTT 2 cut(s) 38, 1244
HinfI GANTC 5 cut(s) 1270, 1605, 1678, 1740, 2006
HpaII CCGG 8 cut(s) 349, 455, 539, 1685, 2126, 2171, 2228, 2274
HphI GGTGA 6 cut(s) 362, 411, 512, 521, 1907, 2194
Hpy166II GTNNAC 3 cut(s) 630, 1080, 1590
Hpy188I TCNGA 7 cut(s) 112, 432, 468, 1426, 1638, 2221, 2335
Hpy8I GTNNAC 3 cut(s) 630, 1080, 1590
Hpy99I CGWCG 2 cut(s) 157, 1992
HpyAV CCTTC 6 cut(s) 58, 196, 228, 1831, 2204, 2407
HpyCH4III ACNGT 7 cut(s) 463, 601, 924, 1000, 1077, 1373, 1703
HpyCH4IV ACGT 7 cut(s) 83, 94, 258, 1082, 1142, 1162, 1586
HpyCH4V TGCA 8 cut(s) 313, 900, 991, 1376, 1854, 1981, 2086, 2401
HpyF10VI GCNNNNNNNGC 6 cut(s) 411, 443, 1325, 2146, 2201, 2424
HpyF3I CTNAG 7 cut(s) 36, 109, 758, 851, 1635, 2040, 2310
HpySE526I ACGT 7 cut(s) 83, 94, 258, 1082, 1142, 1162, 1586
Hsp92I GRCGYC 2 cut(s) 83, 2123
Hsp92II CATG 9 cut(s) 74, 201, 333, 404, 800, 995, 1196, 1783, 2345
HspAI GCGC 6 cut(s) 170, 414, 829, 2089, 2202, 2204
LmnI GCTCC 3 cut(s) 451, 1533, 2424
Lsp1109I GCAGC 7 cut(s) 297, 325, 1532, 2062, 2098, 2186, 2277
LweI GCATC 3 cut(s) 1225, 2062, 2424
MaeI CTAG 6 cut(s) 647, 1517, 1556, 2252, 2279, 2501
MaeII ACGT 7 cut(s) 83, 94, 258, 1082, 1142, 1162, 1586
MaeIII GTNAC 9 cut(s) 259, 341, 457, 534, 554, 994, 1000, 2119, 2182
MfeI CAATTG 1 cut(s) 1475
MflI RGATCY 5 cut(s) 488, 1552, 1558, 1858, 1993
MhlI GDGCHC 4 cut(s) 448, 1921, 2382, 2420
MlyI GAGTC 1 cut(s) 1672
MmeI TCCRAC 3 cut(s) 599, 2199, 2505
MseI TTAA 3 cut(s) 1151, 1407, 1577
MslI CAYNNNNRTG 4 cut(s) 328, 801, 1197, 1227
MspA1I CMGCKG 3 cut(s) 310, 777, 2350
MspI CCGG 8 cut(s) 349, 455, 539, 1685, 2126, 2171, 2228, 2274
MspR9I CCNGG 5 cut(s) 455, 1930, 2048, 2177, 2275
MunI CAATTG 1 cut(s) 1475
MvaI CCWGG 3 cut(s) 1930, 2048, 2177
MvnI CGCG 2 cut(s) 172, 2204
MwoI GCNNNNNNNGC 6 cut(s) 411, 443, 1325, 2146, 2201, 2424
NciI CCSGG 2 cut(s) 455, 2275
NcoI CCATGG 2 cut(s) 197, 329
NdeI CATATG 2 cut(s) 161, 410
NlaIII CATG 9 cut(s) 74, 201, 333, 404, 800, 995, 1196, 1783, 2345
NlaIV GGNNCC 6 cut(s) 245, 406, 490, 1207, 2418, 2479
NmeAIII GCCGAG 2 cut(s) 2015, 2463
NmuCI GTSAC 4 cut(s) 554, 994, 2119, 2182
NspI RCATGY 2 cut(s) 995, 1783
PauI GCGCGC 1 cut(s) 2202
PciI ACATGT 1 cut(s) 1779
PfeI GAWTC 4 cut(s) 1270, 1605, 1740, 2006
PflMI CCANNNNNTGG 3 cut(s) 198, 228, 485
PfoI TCCNGGA 1 cut(s) 2175
PinAI ACCGGT 1 cut(s) 2227
PleI GAGTC 1 cut(s) 1672
PpsI GAGTC 1 cut(s) 1672
Ppu21I YACGTR 1 cut(s) 1587
PpuMI RGGWCCY 1 cut(s) 2044
PscI ACATGT 1 cut(s) 1779
Psp124BI GAGCTC 1 cut(s) 448
Psp1406I AACGTT 1 cut(s) 258
Psp5II RGGWCCY 1 cut(s) 2044
Psp6I CCWGG 3 cut(s) 1928, 2046, 2175
PspEI GGTNACC 1 cut(s) 457
PspFI CCCAGC 5 cut(s) 55, 777, 1506, 2135, 2156
PspGI CCWGG 3 cut(s) 1928, 2046, 2175
PspN4I GGNNCC 6 cut(s) 245, 406, 490, 1207, 2418, 2479
PspOMI GGGCCC 1 cut(s) 2416
PspPPI RGGWCCY 1 cut(s) 2044
PstI CTGCAG 3 cut(s) 315, 1856, 2403
PsuI RGATCY 5 cut(s) 488, 1552, 1558, 1858, 1993
PteI GCGCGC 1 cut(s) 2202
PvuII CAGCTG 2 cut(s) 310, 777
RseI CAYNNNNRTG 4 cut(s) 328, 801, 1197, 1227
SacI GAGCTC 1 cut(s) 448
SaqAI TTAA 3 cut(s) 1151, 1407, 1577
ScaI AGTACT 2 cut(s) 365, 1850
SchI GAGTC 1 cut(s) 1672
ScrFI CCNGG 5 cut(s) 455, 1930, 2048, 2177, 2275
SduI GDGCHC 4 cut(s) 448, 1921, 2382, 2420
SfaNI GCATC 3 cut(s) 1225, 2062, 2424
SfcI CTRYAG 4 cut(s) 311, 1852, 2399, 2487
SinI GGWCC 2 cut(s) 2044, 2173
SmiMI CAYNNNNRTG 4 cut(s) 328, 801, 1197, 1227
SmlI CTYRAG 2 cut(s) 908, 1718
SmoI CTYRAG 2 cut(s) 908, 1718
SspI AATATT 1 cut(s) 943
SspMI CTAG 6 cut(s) 647, 1517, 1556, 2252, 2279, 2501
SstI GAGCTC 1 cut(s) 448
StyD4I CCNGG 5 cut(s) 453, 1928, 2046, 2175, 2273
StyI CCWWGG 3 cut(s) 197, 329, 2251
TaaI ACNGT 7 cut(s) 463, 601, 924, 1000, 1077, 1373, 1703
TaiI ACGT 7 cut(s) 86, 97, 261, 1085, 1145, 1165, 1589
TaqI TCGA 8 cut(s) 155, 442, 654, 1053, 1233, 1437, 1990, 1998
TatI WGTACW 3 cut(s) 363, 1264, 1848
TauI GCSGC 5 cut(s) 151, 1908, 1953, 2055, 2350
TfiI GAWTC 4 cut(s) 1270, 1605, 1740, 2006
Tru1I TTAA 3 cut(s) 1151, 1407, 1577
Tru9I TTAA 3 cut(s) 1151, 1407, 1577
TscAI CASTG 2 cut(s) 741, 2269
TseFI GTSAC 4 cut(s) 554, 994, 2119, 2182
TseI GCWGC 7 cut(s) 310, 313, 1520, 2075, 2086, 2199, 2290
Tsp45I GTSAC 4 cut(s) 554, 994, 2119, 2182
TspDTI ATGAA 3 cut(s) 285, 1778, 2330
TspGWI ACGGA 4 cut(s) 713, 1086, 1172, 1297
TspRI CASTG 2 cut(s) 741, 2269
Van91I CCANNNNNTGG 3 cut(s) 198, 228, 485
VpaK11BI GGWCC 2 cut(s) 2044, 2173
XagI CCTNNNNNAGG 2 cut(s) 222, 960
XapI RAATTY 7 cut(s) 710, 749, 856, 1511, 1754, 1884, 2404
XbaI TCTAGA 2 cut(s) 646, 1555
XceI RCATGY 2 cut(s) 995, 1783
XcmI CCANNNNNNNNNTGG 2 cut(s) 68, 1671
XmaJI CCTAGG 1 cut(s) 2251
XspI CTAG 6 cut(s) 647, 1517, 1556, 2252, 2279, 2501
ZraI GACGTC 1 cut(s) 84
ZrmI AGTACT 2 cut(s) 365, 1850
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.