Rh5AG198500

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0000079
Physical Location & Seq
Reverse (-)
23397013 .. 23407528
10516 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG198500.1

Sequence Viewer

Length: 1434 bp
ATGTCAAAGAGTCAAGCAAGAATTAAAGATAGGATTAGTACATTACCTGACGAAATTCTTTGCAAAATACTTTCTTGCCTTGAACTACAATGTGCTGTGAGGACCACCGTTTTGTCCGCGAGATGGAAGAATTTATGGACTTCTCTTCCCAACCTATGGTTCTGCAATGAAGATTTTAGTGATGATGATGCTTTTATGACGTTTGTGGATCGTGTTCTTTTCTTTCGTGACTCGTCAGACATCAAAGAATTCTATCTTGACCTCGAGAAACCAAAGGATGATTTCTCTCGTATTGAAAGTTGGATTTGTACCGCCATTAGGCGGAATGTTGTTGAACTTAATCTTTGTGTCAATTTATATCCGGACAAGACTTTTGAATTGCCTCGAAGCCTTTTCACTTGCAAAACACTAGAGGTGTTGTACCTGACGTCAAATTTTATTGCCAATCCTCCAAAATCTGGGTGTTTCCCGAATCTCAAGTTCCTCGATGTTCTGGTTCATTTTCCTAACCATAATAACTCGTCATTAGGACAGATTTTCTCTAACTGCCCTGTTCTTGAGGATTTGAGAATTCATGGGCCTCTTGGGGCGTATGATGAAGTTTTGGATTTCAACATCTCTGCACCTGAACTGAAGAGATTAACAATAGGATTGTACATTGACGATTTTGAGGATGAAGAGTATAATTTTCATATTAATGCTCCAAAACTTGAAGTCTTGAACCTCCCTGAGGGTGATTCGTCAGTGTTTTCATTTGAGATCAGTGCAAAGTCCGTTGTCAAAGCCAATATCAATCTTTCTAGCTGTCGTGTACATTTTGACAGTACAAATGGACTTCTGGAAGCCATCTCCAATGTCAAACAGCTCTCTCTTTCAAATCATTATTTGGAGGGTGGTGTACCTGCTTTTGATAATCTGAACCATTTGGAACTGTCTCTTTGTGGTTTCACCTGCTGGCGATATCTAATAGAGTTTCTCAAGAGATCACGGAATCTAGAATATCTTGTTATCAAACATCATTGCAAAGGTCAGCATGTGGACTTTACCTCTCCAGAGTTTGTGCCTTTTTGTATGTTGTCACATCTCAAGACTATCACAATAGCAAGCTTTGAGGGAAGGCAGGATGAAATGAGAGTTGCTCAGTATTTGCTAAAGTACAGTGAAGTTTTGAATAAGATGACTATTTTTACCATTTCAGCAGGTCTTCCAAGAGCAGAAGAGGAGGCATTGTACAAAAATTTTTTGATGTTCGAACGGGGTTCAAAGACTTGTCAAGTTGAAATATGTGAATCGCTTCCATCAGATCTTCAAAACTCTAGGGATCGAGTACTACGAGAAGGTCCTCCCTTCGGCAACCACAGGAAGGCCTCACGGCTATCTGCTTGTGAAGCTGGTGTTAGAGTCGCGGTGGCGGAAGTGCTCGAGCGGCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

477

Amino Acids

54.61

Weight (kDa)

5.57

Isoelectric Point (pI)

48.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 12 - 52 2.5e-06 F-box domain
LRR_At1g61320_AtMIF1 PF23622 79 - 408 8.7e-14 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 99 - 243 6.5e-13 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 351 - 395 6.4e-13 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 959
AatII GACGTC 1 cut(s) 431
Acc36I ACCTGC 3 cut(s) 910, 959, 1190
AccB7I CCANNNNNTGG 2 cut(s) 156, 458
AccBSI CCGCTC 1 cut(s) 1426
AccII CGCG 2 cut(s) 119, 1406
AccIII TCCGGA 1 cut(s) 361
AciI CCGC 6 cut(s) 117, 312, 322, 1406, 1412, 1426
AclWI GGATC 2 cut(s) 216, 1329
AcsI RAATTY 6 cut(s) 54, 130, 248, 433, 570, 1237
AcuI CTGAAG 1 cut(s) 653
AcyI GRCGYC 1 cut(s) 428
AfiI CCNNNNNNNGG 8 cut(s) 123, 156, 318, 321, 458, 730, 1349, 1363
AjuI GAANNNNNNNTTGG 2 cut(s) 143, 175
AluBI AGCT 4 cut(s) 804, 865, 1107, 1391
AluI AGCT 4 cut(s) 804, 865, 1107, 1391
Alw21I GWGCWC 1 cut(s) 1422
Alw26I GTCTC 1 cut(s) 939
AlwI GGATC 2 cut(s) 216, 1329
Ama87I CYCGRG 2 cut(s) 263, 1421
Aor13HI TCCGGA 1 cut(s) 361
AoxI GGCC 2 cut(s) 578, 1365
ApoI RAATTY 6 cut(s) 54, 130, 248, 433, 570, 1237
ArsI GACNNNNNNTTYG 4 cut(s) 94, 126, 356, 388
AseI ATTAAT 1 cut(s) 696
Asp700I GAANNNNTTC 1 cut(s) 1293
AspS9I GGNCC 3 cut(s) 102, 578, 1340
AsuHPI GGTGA 2 cut(s) 746, 940
AsuII TTCGAA 1 cut(s) 1251
AvaI CYCGRG 2 cut(s) 263, 1421
AvaII GGWCC 2 cut(s) 102, 1340
AxyI CCTNAGG 1 cut(s) 729
BbsI GAAGAC 1 cut(s) 1196
Bbv12I GWGCWC 1 cut(s) 1422
BccI CCATC 3 cut(s) 117, 854, 1306
BceAI ACGGC 1 cut(s) 1388
BcoDI GTCTC 1 cut(s) 939
BfaI CTAG 4 cut(s) 410, 801, 995, 1317
BfuAI ACCTGC 3 cut(s) 910, 959, 1190
BglII AGATCT 1 cut(s) 1303
BisI GCNGC 1 cut(s) 1427
BlsI GCNGC 1 cut(s) 1428
BmcAI AGTACT 1 cut(s) 1329
Bme18I GGWCC 2 cut(s) 102, 1340
BmeT110I CYCGRG 2 cut(s) 263, 1421
BmgT120I GGNCC 3 cut(s) 102, 578, 1340
BmsI GCATC 1 cut(s) 178
BpiI GAAGAC 1 cut(s) 1196
BplI GAGNNNNNCTC 2 cut(s) 1123, 1155
BpmI CTGGAG 1 cut(s) 1035
Bpu14I TTCGAA 1 cut(s) 1251
BpuEI CTTGAG 4 cut(s) 461, 578, 962, 1070
BsaHI GRCGYC 1 cut(s) 428
BsaWI WCCGGW 1 cut(s) 361
BsaXI ACNNNNNCTCC 2 cut(s) 1214, 1244
Bsc4I CCNNNNNNNGG 8 cut(s) 123, 156, 318, 321, 458, 730, 1349, 1363
Bse21I CCTNAGG 1 cut(s) 729
Bse3DI GCAATG 2 cut(s) 172, 1018
BseAI TCCGGA 1 cut(s) 361
BseGI GGATG 3 cut(s) 283, 679, 1129
BseLI CCNNNNNNNGG 8 cut(s) 123, 156, 318, 321, 458, 730, 1349, 1363
BseMI GCAATG 2 cut(s) 172, 1018
BseMII CTCAG 2 cut(s) 720, 1154
BseRI GAGGAG 1 cut(s) 1235
BsgI GTGCAG 1 cut(s) 606
Bsh1236I CGCG 2 cut(s) 119, 1406
BshFI GGCC 2 cut(s) 580, 1367
BsiHKAI GWGCWC 1 cut(s) 1422
BsiHKCI CYCGRG 2 cut(s) 263, 1421
BsiSI CCGG 1 cut(s) 362
BslI CCNNNNNNNGG 8 cut(s) 123, 156, 318, 321, 458, 730, 1349, 1363
BsmAI GTCTC 1 cut(s) 939
BsnI GGCC 2 cut(s) 580, 1367
BsoBI CYCGRG 2 cut(s) 263, 1421
Bsp119I TTCGAA 1 cut(s) 1251
Bsp1286I GDGCHC 1 cut(s) 1422
Bsp13I TCCGGA 1 cut(s) 361
Bsp1407I TGTACA 3 cut(s) 654, 811, 1230
Bsp143I GATC 5 cut(s) 208, 759, 983, 1303, 1321
BspACI CCGC 6 cut(s) 117, 312, 322, 1406, 1412, 1426
BspANI GGCC 2 cut(s) 580, 1367
BspCNI CTCAG 2 cut(s) 721, 1153
BspEI TCCGGA 1 cut(s) 361
BspFNI CGCG 2 cut(s) 119, 1406
BspMI ACCTGC 3 cut(s) 910, 959, 1190
BspPI GGATC 2 cut(s) 216, 1329
BspT104I TTCGAA 1 cut(s) 1251
BsrBI CCGCTC 1 cut(s) 1426
BsrDI GCAATG 2 cut(s) 172, 1018
BsrGI TGTACA 3 cut(s) 654, 811, 1230
BssMI GATC 5 cut(s) 208, 759, 983, 1303, 1321
BssNI GRCGYC 1 cut(s) 428
Bst4CI ACNGT 4 cut(s) 109, 824, 933, 1160
Bst6I CTCTTC 4 cut(s) 150, 629, 672, 1212
BstACI GRCGYC 1 cut(s) 428
BstAUI TGTACA 3 cut(s) 654, 811, 1230
BstBI TTCGAA 1 cut(s) 1251
BstC8I GCNNGC 2 cut(s) 956, 1105
BstDEI CTNAG 2 cut(s) 729, 1140
BstENI CCTNNNNNAGG 1 cut(s) 728
BstF5I GGATG 3 cut(s) 283, 679, 1129
BstFNI CGCG 2 cut(s) 119, 1406
BstKTI GATC 5 cut(s) 211, 762, 986, 1306, 1324
BstMAI GTCTC 1 cut(s) 939
BstMBI GATC 5 cut(s) 208, 759, 983, 1303, 1321
BstMWI GCNNNNNNNGC 2 cut(s) 1388, 1426
BstNSI RCATGY 1 cut(s) 1037
BstUI CGCG 2 cut(s) 119, 1406
BstV2I GAAGAC 1 cut(s) 1196
BstX2I RGATCY 1 cut(s) 1303
BstYI RGATCY 1 cut(s) 1303
Bsu36I CCTNAGG 1 cut(s) 729
BsuRI GGCC 2 cut(s) 580, 1367
BtsCI GGATG 3 cut(s) 283, 679, 1129
BtsIMutI CAGTG 3 cut(s) 750, 769, 1165
BveI ACCTGC 3 cut(s) 910, 959, 1190
Cac8I GCNNGC 2 cut(s) 956, 1105
Cfr13I GGNCC 3 cut(s) 102, 578, 1340
CviAII CATG 2 cut(s) 575, 1034
DdeI CTNAG 2 cut(s) 729, 1140
DpnI GATC 5 cut(s) 210, 761, 985, 1305, 1323
DpnII GATC 5 cut(s) 208, 759, 983, 1303, 1321
Eam1104I CTCTTC 4 cut(s) 150, 629, 672, 1212
EarI CTCTTC 4 cut(s) 150, 629, 672, 1212
EciI GGCGGA 2 cut(s) 337, 1427
Eco147I AGGCCT 1 cut(s) 1367
Eco32I GATATC 1 cut(s) 962
Eco47I GGWCC 2 cut(s) 102, 1340
Eco57I CTGAAG 1 cut(s) 653
Eco81I CCTNAGG 1 cut(s) 729
Eco88I CYCGRG 2 cut(s) 263, 1421
EcoNI CCTNNNNNAGG 1 cut(s) 728
EcoO109I RGGNCCY 1 cut(s) 1340
EcoRI GAATTC 2 cut(s) 248, 570
EcoRV GATATC 1 cut(s) 962
FaeI CATG 2 cut(s) 578, 1037
FatI CATG 2 cut(s) 574, 1033
Fnu4HI GCNGC 1 cut(s) 1427
FokI GGATG 3 cut(s) 290, 686, 1136
Fsp4HI GCNGC 1 cut(s) 1427
FspBI CTAG 4 cut(s) 410, 801, 995, 1317
GluI GCNGC 1 cut(s) 1427
GsuI CTGGAG 1 cut(s) 1035
HaeIII GGCC 2 cut(s) 580, 1367
HapII CCGG 1 cut(s) 362
Hin1I GRCGYC 1 cut(s) 428
Hin1II CATG 2 cut(s) 578, 1037
HindIII AAGCTT 1 cut(s) 1105
HinfI GANTC 7 cut(s) 10, 230, 472, 737, 991, 1289, 1401
HpaII CCGG 1 cut(s) 362
HphI GGTGA 2 cut(s) 746, 940
Hpy166II GTNNAC 3 cut(s) 812, 899, 1039
Hpy188I TCNGA 3 cut(s) 238, 918, 1303
Hpy8I GTNNAC 3 cut(s) 812, 899, 1039
HpyAV CCTTC 4 cut(s) 1110, 1331, 1357, 1357
HpyCH4III ACNGT 4 cut(s) 109, 824, 933, 1160
HpyCH4IV ACGT 2 cut(s) 200, 428
HpyCH4V TGCA 6 cut(s) 63, 165, 402, 623, 767, 1023
HpyF10VI GCNNNNNNNGC 2 cut(s) 1388, 1426
HpyF3I CTNAG 2 cut(s) 729, 1140
HpySE526I ACGT 2 cut(s) 200, 428
Hsp92I GRCGYC 1 cut(s) 428
Hsp92II CATG 2 cut(s) 578, 1037
Kpn2I TCCGGA 1 cut(s) 361
Kzo9I GATC 5 cut(s) 208, 759, 983, 1303, 1321
LmnI GCTCC 1 cut(s) 706
LweI GCATC 1 cut(s) 178
MaeI CTAG 4 cut(s) 410, 801, 995, 1317
MaeII ACGT 2 cut(s) 200, 428
MaeIII GTNAC 2 cut(s) 227, 1077
MalI GATC 5 cut(s) 210, 761, 985, 1305, 1323
MbiI CCGCTC 1 cut(s) 1426
MboI GATC 5 cut(s) 208, 759, 983, 1303, 1321
MboII GAAGA 8 cut(s) 137, 139, 182, 646, 689, 1196, 1229, 1298
MflI RGATCY 1 cut(s) 1303
MhlI GDGCHC 1 cut(s) 1422
MlyI GAGTC 3 cut(s) 19, 224, 1410
MmeI TCCRAC 1 cut(s) 281
MroI TCCGGA 1 cut(s) 361
MroXI GAANNNNTTC 1 cut(s) 1293
MseI TTAA 4 cut(s) 24, 339, 641, 696
MslI CAYNNNNRTG 1 cut(s) 696
MspI CCGG 1 cut(s) 362
MvnI CGCG 2 cut(s) 119, 1406
MwoI GCNNNNNNNGC 2 cut(s) 1388, 1426
NdeII GATC 5 cut(s) 208, 759, 983, 1303, 1321
NlaIII CATG 2 cut(s) 578, 1037
NmuCI GTSAC 2 cut(s) 227, 1077
NspI RCATGY 1 cut(s) 1037
NspV TTCGAA 1 cut(s) 1251
PaeR7I CTCGAG 2 cut(s) 263, 1421
PaqCI CACCTGC 1 cut(s) 959
PceI AGGCCT 1 cut(s) 1367
PcsI WCGNNNNNNNCGW 1 cut(s) 1330
PdmI GAANNNNTTC 1 cut(s) 1293
PfeI GAWTC 4 cut(s) 472, 737, 991, 1289
PflMI CCANNNNNTGG 2 cut(s) 156, 458
PkrI GCNGC 1 cut(s) 1428
PleI GAGTC 3 cut(s) 18, 224, 1409
PpsI GAGTC 3 cut(s) 18, 224, 1409
PpuMI RGGWCCY 1 cut(s) 1340
PshBI ATTAAT 1 cut(s) 696
Psp5II RGGWCCY 1 cut(s) 1340
PspPI GGNCC 3 cut(s) 102, 578, 1340
PspPPI RGGWCCY 1 cut(s) 1340
PspXI VCTCGAGB 1 cut(s) 1421
PsuI RGATCY 1 cut(s) 1303
RseI CAYNNNNRTG 1 cut(s) 696
SaqAI TTAA 4 cut(s) 24, 339, 641, 696
SatI GCNGC 1 cut(s) 1427
Sau3AI GATC 5 cut(s) 208, 759, 983, 1303, 1321
Sau96I GGNCC 3 cut(s) 102, 578, 1340
ScaI AGTACT 1 cut(s) 1329
SchI GAGTC 3 cut(s) 19, 224, 1410
SduI GDGCHC 1 cut(s) 1422
SfaNI GCATC 1 cut(s) 178
Sfr274I CTCGAG 2 cut(s) 263, 1421
SfuI TTCGAA 1 cut(s) 1251
SinI GGWCC 2 cut(s) 102, 1340
SlaI CTCGAG 2 cut(s) 263, 1421
SmiMI CAYNNNNRTG 1 cut(s) 696
SmlI CTYRAG 6 cut(s) 263, 476, 557, 977, 1085, 1421
SmoI CTYRAG 6 cut(s) 263, 476, 557, 977, 1085, 1421
SseBI AGGCCT 1 cut(s) 1367
SsiI CCGC 6 cut(s) 117, 312, 322, 1406, 1412, 1426
SspMI CTAG 4 cut(s) 410, 801, 995, 1317
StuI AGGCCT 1 cut(s) 1367
TaaI ACNGT 4 cut(s) 109, 824, 933, 1160
TaiI ACGT 2 cut(s) 203, 431
TaqI TCGA 6 cut(s) 264, 385, 486, 1251, 1324, 1422
TatI WGTACW 7 cut(s) 38, 654, 811, 824, 1155, 1230, 1327
TauI GCSGC 1 cut(s) 1429
TfiI GAWTC 4 cut(s) 472, 737, 991, 1289
Tru1I TTAA 4 cut(s) 24, 339, 641, 696
Tru9I TTAA 4 cut(s) 24, 339, 641, 696
TscAI CASTG 3 cut(s) 750, 769, 1165
TseFI GTSAC 2 cut(s) 227, 1077
Tsp45I GTSAC 2 cut(s) 227, 1077
TspDTI ATGAA 8 cut(s) 183, 488, 563, 612, 680, 690, 741, 1140
TspGWI ACGGA 2 cut(s) 763, 1003
TspRI CASTG 3 cut(s) 750, 769, 1165
Van91I CCANNNNNTGG 2 cut(s) 156, 458
VpaK11BI GGWCC 2 cut(s) 102, 1340
VspI ATTAAT 1 cut(s) 696
XagI CCTNNNNNAGG 1 cut(s) 728
XapI RAATTY 6 cut(s) 54, 130, 248, 433, 570, 1237
XbaI TCTAGA 1 cut(s) 994
XceI RCATGY 1 cut(s) 1037
XhoI CTCGAG 2 cut(s) 263, 1421
XmnI GAANNNNTTC 1 cut(s) 1293
XspI CTAG 4 cut(s) 410, 801, 995, 1317
ZraI GACGTC 1 cut(s) 429
ZrmI AGTACT 1 cut(s) 1329
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.