Rh7DG169900

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0000079
Physical Location & Seq
Forward (+)
15226403 .. 15228300
1898 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG169900.1

Sequence Viewer

Length: 1419 bp
ATGGCTTCAAACTCAACTCTTCGCAAATCACGCAATGAGGACAGGATCAGTGAGTTGCCAGATGCAATTCTTTGCCACATTCTCTCCTTCTTTTCAACCAGAGAGGCTGTAAAGACTAGCATTTTATCACATAGATGGAAGAATGTCTGGGCTTCTGTTCCTAATCTAGATTTCGATGAATATGAGCTAGACTATGTTTTCCGTACTTTGCCGCAACCAGTAAGATATGAGTCAGATTGGTTTGCACAGTTTGTGAACCGTGTACTTCTCAGTCGATGCCTGGGAAACATTCATAGGTTCTGTCTTCGAACTACTGATATGATGAATGTTTCTCTTATTGATGTTTGGGTTTCCACTGCCATAAAGCATAATGTTGTTGAACTTGTTCTTAGTTTGGGGGGTCCTCACTTGCCGGATTTTGAGATTCCGAGATGTCTTTTTATGTGCAACACATTGGTTAGTTTGGAGTTGGGTGTGCACAAAAATATTTGTGCCGTTACTCCTCCCTCACATTGTTTCCCCTGTCTCAAGTTGCTACATGTTACATTTCGGTTTCCTGATTCTCACACAGTGGAGAAGTTATTTCCTTCTTTCCCTGTACTTGAAGATCTTATTATAGATGGAGAACATGAAGATGCGTCAGGTTTCAATCTTGTTATATCTGCACCCAAACTGAAAAGACTGCAAATTAGTTTCATTGTCTGTAAATCTGCTATGATAGCTGCTGCAAGTGATTCTGAGGATTATGAAAATTATGGGTGCCAAATTTTTGTTAGTGCTGATGCTCCAAATCTTGAAGAGTTAGATATCTACTATGATATTCTGGTGAGCTATTCTTTGAAGAATGCCAAATGTCTGAGGAAAGCCGAGATAGGTTTCTTAGATGTGAAAGATCTTGAGAACCTTGATTATTTTCTTGCCCTCTCTGATCGCATATGCCGGCTCTTTGCAGATATTTGTAATGCTAAGTACCTGACAGTTTCGGCTCCAATTTTTGCGCTTCAAACTTGTCTCTGTTTGCAATCACTGACAACTTTGCTCAAGATATCACCAAATTTGGAACATCTCAAGATATTACCAAAAAGGGAACACCTGTATGTCAATGAGTACAACTATTGTGATGACGACGATGAGGATGAGCCTGAACATGGATGGGATGCACCAGAGTCTGTGCCTGTTTGTTTGATTTCACACCTCAAGACTATTTGCCTATGGGAATTCAAGGGGTGTCCAAATGAGGTGGAAGTGGCAAAGTACTTGGTGAAGCATGGCAAGGCTTTGAATAAGGTGACTATTTATAATCACTTCAGTGAAGACGAGGAGATGGAGATACGGTCACCTAGTGCCTTATGGTCGAAATTTTCAAAGTTTCCCAGGGGTTCCAAGACTTGTAAAATTCAATTTCAGACAATCATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

472

Amino Acids

54.02

Weight (kDa)

5.55

Isoelectric Point (pI)

44.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 16 - 55 9.4e-08 F-box domain
LRR_At5g56370 PF24758 114 - 358 8.1e-12 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 388 - 432 3.4e-13 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1299
AccB1I GGYRCC 1 cut(s) 759
AciI CCGC 1 cut(s) 212
AclWI GGATC 1 cut(s) 53
AcsI RAATTY 5 cut(s) 765, 1054, 1217, 1358, 1395
AcuI CTGAAG 1 cut(s) 1291
AdeI CACNNNGTG 2 cut(s) 571, 1343
AfaI GTAC 6 cut(s) 205, 264, 600, 971, 1109, 1256
AfiI CCNNNNNNNGG 1 cut(s) 1148
AflIII ACRYGT 1 cut(s) 538
AjnI CCWGG 2 cut(s) 279, 1373
AleI CACNNNNGTG 1 cut(s) 1308
AluBI AGCT 3 cut(s) 187, 722, 831
AluI AGCT 3 cut(s) 187, 722, 831
Alw21I GWGCWC 1 cut(s) 480
Alw26I GTCTC 2 cut(s) 530, 1016
Alw44I GTGCAC 1 cut(s) 476
AlwI GGATC 1 cut(s) 53
AlwNI CAGNNNCTG 1 cut(s) 1169
ApaLI GTGCAC 1 cut(s) 476
ApeKI GCWGC 2 cut(s) 722, 725
ApoI RAATTY 5 cut(s) 765, 1054, 1217, 1358, 1395
Asp700I GAANNNNTTC 1 cut(s) 384
AspLEI GCGC 1 cut(s) 1000
AspS9I GGNCC 1 cut(s) 401
AsuHPI GGTGA 5 cut(s) 838, 1041, 1273, 1300, 1329
AsuII TTCGAA 1 cut(s) 307
AvaII GGWCC 1 cut(s) 401
BaeGI GKGCMC 1 cut(s) 480
BanI GGYRCC 1 cut(s) 759
BbsI GAAGAC 2 cut(s) 296, 1320
Bbv12I GWGCWC 1 cut(s) 480
BbvI GCAGC 2 cut(s) 709, 712
BccI CCATC 4 cut(s) 129, 614, 1146, 1318
BceAI ACGGC 1 cut(s) 479
BciT130I CCWGG 2 cut(s) 281, 1375
BcoDI GTCTC 2 cut(s) 530, 1016
BfaI CTAG 4 cut(s) 117, 167, 188, 1341
BglII AGATCT 2 cut(s) 607, 892
BisI GCNGC 3 cut(s) 212, 723, 726
BlsI GCNGC 3 cut(s) 213, 724, 727
BmcAI AGTACT 1 cut(s) 1256
Bme1390I CCNGG 2 cut(s) 281, 1375
Bme18I GGWCC 1 cut(s) 401
BmgT120I GGNCC 1 cut(s) 401
BmiI GGNNCC 4 cut(s) 402, 761, 987, 1381
BmrFI CCNGG 2 cut(s) 281, 1375
BmsI GCATC 5 cut(s) 52, 266, 625, 772, 1147
BpiI GAAGAC 2 cut(s) 296, 1320
Bpu14I TTCGAA 1 cut(s) 307
BpuEI CTTGAG 5 cut(s) 512, 917, 1025, 1052, 1181
BsaJI CCNNGG 3 cut(s) 280, 1373, 1374
BsaXI ACNNNNNCTCC 4 cut(s) 68, 98, 1319, 1349
Bsc4I CCNNNNNNNGG 1 cut(s) 1148
Bse118I RCCGGY 1 cut(s) 939
Bse1I ACTGG 1 cut(s) 218
Bse3DI GCAATG 1 cut(s) 40
BseBI CCWGG 2 cut(s) 281, 1375
BseDI CCNNGG 3 cut(s) 280, 1373, 1374
BseGI GGATG 3 cut(s) 1141, 1157, 1162
BseLI CCNNNNNNNGG 1 cut(s) 1148
BseMI GCAATG 1 cut(s) 40
BseMII CTCAG 3 cut(s) 283, 729, 848
BseNI ACTGG 1 cut(s) 218
BseRI GAGGAG 2 cut(s) 492, 1334
BseSI GKGCMC 1 cut(s) 480
BseXI GCAGC 2 cut(s) 709, 712
BsgI GTGCAG 1 cut(s) 648
BshNI GGYRCC 1 cut(s) 759
BsiHKAI GWGCWC 1 cut(s) 480
BsiSI CCGG 2 cut(s) 413, 940
BslI CCNNNNNNNGG 1 cut(s) 1148
BsmAI GTCTC 2 cut(s) 530, 1016
BsmI GAATGC 1 cut(s) 850
Bsp119I TTCGAA 1 cut(s) 307
Bsp1286I GDGCHC 1 cut(s) 480
Bsp143I GATC 4 cut(s) 45, 607, 892, 928
BspACI CCGC 1 cut(s) 212
BspCNI CTCAG 3 cut(s) 282, 730, 849
BspLI GGNNCC 4 cut(s) 402, 761, 987, 1381
BspPI GGATC 1 cut(s) 53
BspT104I TTCGAA 1 cut(s) 307
BspT107I GGYRCC 1 cut(s) 759
BsrDI GCAATG 1 cut(s) 40
BsrFI RCCGGY 1 cut(s) 939
BsrI ACTGG 1 cut(s) 218
BssAI RCCGGY 1 cut(s) 939
BssECI CCNNGG 3 cut(s) 280, 1373, 1374
BssMI GATC 4 cut(s) 45, 607, 892, 928
Bst2UI CCWGG 2 cut(s) 281, 1375
Bst4CI ACNGT 5 cut(s) 249, 260, 571, 979, 1335
Bst6I CTCTTC 2 cut(s) 24, 792
BstBI TTCGAA 1 cut(s) 307
BstC8I GCNNGC 1 cut(s) 941
BstDEI CTNAG 6 cut(s) 269, 389, 738, 857, 880, 966
BstEII GGTNACC 1 cut(s) 1335
BstF5I GGATG 3 cut(s) 1141, 1157, 1162
BstHHI GCGC 1 cut(s) 1000
BstKTI GATC 4 cut(s) 48, 610, 895, 931
BstMAI GTCTC 2 cut(s) 530, 1016
BstMBI GATC 4 cut(s) 45, 607, 892, 928
BstMWI GCNNNNNNNGC 2 cut(s) 30, 719
BstNI CCWGG 2 cut(s) 281, 1375
BstNSI RCATGY 1 cut(s) 542
BstPI GGTNACC 1 cut(s) 1335
BstSCI CCNGG 2 cut(s) 279, 1373
BstSLI GKGCMC 1 cut(s) 480
BstV1I GCAGC 2 cut(s) 709, 712
BstV2I GAAGAC 2 cut(s) 296, 1320
BstX2I RGATCY 2 cut(s) 607, 892
BstYI RGATCY 2 cut(s) 607, 892
BtsCI GGATG 3 cut(s) 1141, 1157, 1162
BtsI GCAGTG 1 cut(s) 354
BtsIMutI CAGTG 5 cut(s) 55, 354, 576, 1025, 1315
Cac8I GCNNGC 1 cut(s) 941
CaiI CAGNNNCTG 1 cut(s) 1169
CfoI GCGC 1 cut(s) 1000
Cfr10I RCCGGY 1 cut(s) 939
Cfr13I GGNCC 1 cut(s) 401
CseI GACGC 1 cut(s) 627
Csp6I GTAC 6 cut(s) 204, 263, 599, 970, 1108, 1255
CspCI CAANNNNNGTGG 2 cut(s) 1221, 1256
CviAII CATG 4 cut(s) 539, 629, 1148, 1268
CviQI GTAC 6 cut(s) 204, 263, 599, 970, 1108, 1255
DdeI CTNAG 6 cut(s) 269, 389, 738, 857, 880, 966
DpnI GATC 4 cut(s) 47, 609, 894, 930
DpnII GATC 4 cut(s) 45, 607, 892, 928
DraIII CACNNNGTG 2 cut(s) 571, 1343
Eam1104I CTCTTC 2 cut(s) 24, 792
EarI CTCTTC 2 cut(s) 24, 792
Eco32I GATATC 2 cut(s) 808, 1047
Eco47I GGWCC 1 cut(s) 401
Eco57I CTGAAG 1 cut(s) 1291
Eco91I GGTNACC 1 cut(s) 1335
EcoO109I RGGNCCY 1 cut(s) 401
EcoO65I GGTNACC 1 cut(s) 1335
EcoRI GAATTC 1 cut(s) 1217
EcoRII CCWGG 2 cut(s) 279, 1373
EcoRV GATATC 2 cut(s) 808, 1047
FaeI CATG 4 cut(s) 542, 632, 1151, 1271
FatI CATG 4 cut(s) 538, 628, 1147, 1267
FauNDI CATATG 1 cut(s) 935
Fnu4HI GCNGC 3 cut(s) 212, 723, 726
FokI GGATG 3 cut(s) 1148, 1164, 1169
Fsp4HI GCNGC 3 cut(s) 212, 723, 726
FspBI CTAG 4 cut(s) 117, 167, 188, 1341
GlaI GCGC 1 cut(s) 999
GluI GCNGC 3 cut(s) 212, 723, 726
HapII CCGG 2 cut(s) 413, 940
HgaI GACGC 1 cut(s) 627
HhaI GCGC 1 cut(s) 1000
Hin1II CATG 4 cut(s) 542, 632, 1151, 1271
Hin6I GCGC 1 cut(s) 998
HinP1I GCGC 1 cut(s) 998
HinfI GANTC 5 cut(s) 230, 424, 560, 734, 1166
HpaII CCGG 2 cut(s) 413, 940
HphI GGTGA 5 cut(s) 838, 1041, 1273, 1300, 1329
Hpy166II GTNNAC 3 cut(s) 256, 263, 478
Hpy188I TCNGA 6 cut(s) 235, 429, 739, 858, 928, 1407
Hpy188III TCNNGA 7 cut(s) 167, 557, 794, 896, 1042, 1069, 1198
Hpy8I GTNNAC 3 cut(s) 256, 263, 478
Hpy99I CGWCG 1 cut(s) 1130
HpyAV CCTTC 2 cut(s) 97, 597
HpyCH4III ACNGT 5 cut(s) 249, 260, 571, 979, 1335
HpyF10VI GCNNNNNNNGC 2 cut(s) 30, 719
HpyF3I CTNAG 6 cut(s) 269, 389, 738, 857, 880, 966
Hsp92II CATG 4 cut(s) 542, 632, 1151, 1271
HspAI GCGC 1 cut(s) 998
KroI GCCGGC 1 cut(s) 939
KroNI GCCGGC 1 cut(s) 941
Kzo9I GATC 4 cut(s) 45, 607, 892, 928
LmnI GCTCC 2 cut(s) 790, 991
Lsp1109I GCAGC 2 cut(s) 709, 712
LweI GCATC 5 cut(s) 52, 266, 625, 772, 1147
MaeI CTAG 4 cut(s) 117, 167, 188, 1341
MaeIII GTNAC 4 cut(s) 496, 541, 1288, 1335
MalI GATC 4 cut(s) 47, 609, 894, 930
MboI GATC 4 cut(s) 45, 607, 892, 928
MboII GAAGA 8 cut(s) 11, 151, 296, 617, 644, 809, 853, 1325
MflI RGATCY 2 cut(s) 607, 892
MhlI GDGCHC 1 cut(s) 480
MlyI GAGTC 2 cut(s) 239, 1175
MroNI GCCGGC 1 cut(s) 939
MroXI GAANNNNTTC 1 cut(s) 384
MslI CAYNNNNRTG 4 cut(s) 133, 633, 1095, 1308
MspI CCGG 2 cut(s) 413, 940
MspR9I CCNGG 2 cut(s) 281, 1375
Mva1269I GAATGC 1 cut(s) 850
MvaI CCWGG 2 cut(s) 281, 1375
MwoI GCNNNNNNNGC 2 cut(s) 30, 719
NaeI GCCGGC 1 cut(s) 941
NdeI CATATG 1 cut(s) 935
NdeII GATC 4 cut(s) 45, 607, 892, 928
NgoMIV GCCGGC 1 cut(s) 939
NlaIII CATG 4 cut(s) 542, 632, 1151, 1271
NlaIV GGNNCC 4 cut(s) 402, 761, 987, 1381
NmeAIII GCCGAG 1 cut(s) 892
NmuCI GTSAC 2 cut(s) 1288, 1335
NspI RCATGY 1 cut(s) 542
NspV TTCGAA 1 cut(s) 307
OliI CACNNNNGTG 1 cut(s) 1308
PasI CCCWGGG 1 cut(s) 1374
PciI ACATGT 1 cut(s) 538
PctI GAATGC 1 cut(s) 850
PdiI GCCGGC 1 cut(s) 941
PdmI GAANNNNTTC 1 cut(s) 384
PfeI GAWTC 3 cut(s) 424, 560, 734
PkrI GCNGC 3 cut(s) 213, 724, 727
PleI GAGTC 2 cut(s) 238, 1174
PpsI GAGTC 2 cut(s) 238, 1174
PpuMI RGGWCCY 1 cut(s) 401
PscI ACATGT 1 cut(s) 538
PsiI TTATAA 1 cut(s) 1299
Psp5II RGGWCCY 1 cut(s) 401
Psp6I CCWGG 2 cut(s) 279, 1373
PspEI GGTNACC 1 cut(s) 1335
PspGI CCWGG 2 cut(s) 279, 1373
PspN4I GGNNCC 4 cut(s) 402, 761, 987, 1381
PspPI GGNCC 1 cut(s) 401
PspPPI RGGWCCY 1 cut(s) 401
PstNI CAGNNNCTG 1 cut(s) 1169
PsuI RGATCY 2 cut(s) 607, 892
RsaI GTAC 6 cut(s) 205, 264, 600, 971, 1109, 1256
RsaNI GTAC 6 cut(s) 204, 263, 599, 970, 1108, 1255
RseI CAYNNNNRTG 4 cut(s) 133, 633, 1095, 1308
SatI GCNGC 3 cut(s) 212, 723, 726
Sau3AI GATC 4 cut(s) 45, 607, 892, 928
Sau96I GGNCC 1 cut(s) 401
ScaI AGTACT 1 cut(s) 1256
SchI GAGTC 2 cut(s) 239, 1175
ScrFI CCNGG 2 cut(s) 281, 1375
SduI GDGCHC 1 cut(s) 480
SfaNI GCATC 5 cut(s) 52, 266, 625, 772, 1147
SfuI TTCGAA 1 cut(s) 307
SinI GGWCC 1 cut(s) 401
SmiMI CAYNNNNRTG 4 cut(s) 133, 633, 1095, 1308
SmlI CTYRAG 5 cut(s) 527, 896, 1040, 1067, 1196
SmoI CTYRAG 5 cut(s) 527, 896, 1040, 1067, 1196
SsiI CCGC 1 cut(s) 212
SspI AATATT 1 cut(s) 487
SspMI CTAG 4 cut(s) 117, 167, 188, 1341
StyD4I CCNGG 2 cut(s) 279, 1373
TaaI ACNGT 5 cut(s) 249, 260, 571, 979, 1335
TaqI TCGA 4 cut(s) 174, 274, 307, 1355
TatI WGTACW 4 cut(s) 262, 598, 1107, 1254
TauI GCSGC 1 cut(s) 214
TfiI GAWTC 3 cut(s) 424, 560, 734
TscAI CASTG 5 cut(s) 55, 361, 576, 1032, 1315
TseFI GTSAC 2 cut(s) 1288, 1335
TseI GCWGC 2 cut(s) 722, 725
Tsp45I GTSAC 2 cut(s) 1288, 1335
TspDTI ATGAA 6 cut(s) 192, 281, 338, 645, 685, 762
TspGWI ACGGA 1 cut(s) 191
TspRI CASTG 5 cut(s) 55, 361, 576, 1032, 1315
VneI GTGCAC 1 cut(s) 476
VpaK11BI GGWCC 1 cut(s) 401
XapI RAATTY 5 cut(s) 765, 1054, 1217, 1358, 1395
XbaI TCTAGA 1 cut(s) 166
XceI RCATGY 1 cut(s) 542
XmnI GAANNNNTTC 1 cut(s) 384
XspI CTAG 4 cut(s) 117, 167, 188, 1341
ZrmI AGTACT 1 cut(s) 1256
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.