Prupe.4G160900_v2.0.a1

domain in FBox and BRCT domain containing plant proteins

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000079
Physical Location & Seq
Reverse (-)
9228178 .. 9230816
2639 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G160900.1

Sequence Viewer

Length: 1386 bp
ATGGCTTCGAACTCAAAGCCTCATCAAGCATGCATTGATGAAGACAGGATCAGTGGATTACCGGATGAAGTTCTTTGCCACATTCTTTCCTTCCTTTACACAATCACAGCTGTAAAAACCTGCGTCTTATCACACAGATGGAAGAATTTGTGGGCTTCTGTTCCCAATCTAAAGTTGCTTATATGTTCACCAAAATCTGACTCCACATGTAGTCCAGGATTTGTGGATCGAGTACTTTCATCTCGTGGCTCGTCAAGAATTCATCGGTTCCATCTTAATTTGTATGGGGCACACAAATATTTTTCTCATGTTGATGAGTGGATTTGCACTGCCATTACGCGTAATGTCGTCGAACTCCATCTTTTGTTGTTCCCAAATCCATGGCAGCGTTATGAGTTGCCTAGCACCCTTTTCATGTGCAAGACGCTGGTGATTTTGAAGTTGATGCTGCAGTTCGATATCGTTGCCATTCCACCGAACTCGGATTGTTTCCCAAATCTCAAGTTCCTCCACGTTTCAGTCTGCTTTCCGGATGCGGACTCAATGAAGAAGCTTTTTTCTTGTTGCCCTGCACTTGAAGATTTGATTATAGATGGAAATGTTGAGAAAATCCCCGGAGAAGCTGATTCGGTCTTGAGATTAAATGTTTCTGCACCCAAACTAAAAATACTACAAATAAGTTTGATGGGCAGTTGGATGAGGAATGTTTCTATCACAGTCAATGCTCCACAGCTTGAAACGTTGGATCTCATGGAGAATTTTTTTGCCACCTATTCTTTGAAGAATGCAAAATCCCTAAGCAAAGCCAAGGTTGATGTCCAAGTGTATAGGAGATATCACGCTGATCCTGGCATTGATTATGCTCATCGCACGCATAGGCTTTTTGCAGGAATTATCAATGTTAAATCTCTGTCTCTTGCAGCTCCCATTTTGACAAATCCTTGCCTCGAATTTCAAGGTCCGCTGCCTAAGTTCTATAATTTGAACCACTTGGAGGTACGTCTTAAAACCTGCTCCTCCTGGAAATCACTGACGAAGTTGCTCGAGATATCACCCAATCTGGAGAATCTTGTCTTTGAAAATAACATCGAGTGTCATGCCGATCATGACAAGAATGATCAATGGTGTCAACCAGAGACTCTGCCTATTTGTTTGTTCTCAAGCCTCAAGACTGTTTGCGTACGGGGATTCAGATGGCACTCAGACGAAATGGAAGCGGTGAAGTACATGCTGAAGCACGGTGAAGCTCTGAACAAAGTGACAGTTTATGCTAGAAATATCTCAGCAGAAAAACAGATGGAGTGGCAGCAGGAGTTTGTAGATTTCCCAAGGGTTTCAAAGACTTGCCAAATTGAACTTGTGCAACTCATAGATAGGGGTTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

462

Amino Acids

52.64

Weight (kDa)

8.04

Isoelectric Point (pI)

37.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 128, 1019
AccII CGCG 1 cut(s) 340
AccIII TCCGGA 1 cut(s) 529
AciI CCGC 3 cut(s) 536, 962, 1217
AclI AACGTT 1 cut(s) 740
AclWI GGATC 4 cut(s) 56, 234, 753, 839
AcsI RAATTY 4 cut(s) 145, 258, 757, 950
AcuI CTGAAG 1 cut(s) 1253
AfaI GTAC 4 cut(s) 234, 999, 1182, 1226
AfiI CCNNNNNNNGG 1 cut(s) 994
AflIII ACRYGT 2 cut(s) 206, 338
AgsI TTSAA 9 cut(s) 439, 578, 737, 781, 956, 985, 1079, 1338, 1355
AjnI CCWGG 3 cut(s) 214, 847, 1019
AluBI AGCT 6 cut(s) 110, 553, 623, 733, 923, 1247
AluI AGCT 6 cut(s) 110, 553, 623, 733, 923, 1247
Alw26I GTCTC 2 cut(s) 918, 1130
AlwI GGATC 4 cut(s) 56, 234, 753, 839
Ama87I CYCGRG 1 cut(s) 1043
Aor13HI TCCGGA 1 cut(s) 529
ApeKI GCWGC 5 cut(s) 385, 448, 920, 964, 1306
ApoI RAATTY 4 cut(s) 145, 258, 757, 950
AspS9I GGNCC 1 cut(s) 959
AsuC2I CCSGG 1 cut(s) 615
AsuHPI GGTGA 5 cut(s) 180, 442, 1044, 1231, 1253
AsuII TTCGAA 1 cut(s) 8
AvaI CYCGRG 1 cut(s) 1043
AvaII GGWCC 1 cut(s) 959
BaeGI GKGCMC 1 cut(s) 292
BauI CACGAG 1 cut(s) 243
BbsI GAAGAC 1 cut(s) 48
BbvI GCAGC 5 cut(s) 397, 435, 932, 951, 1318
BccI CCATC 7 cut(s) 132, 279, 366, 587, 679, 1188, 1291
BcgI CGANNNNNNTGC 4 cut(s) 446, 480, 1079, 1113
BciT130I CCWGG 3 cut(s) 216, 849, 1021
BclI TGATCA 1 cut(s) 1117
BcnI CCSGG 1 cut(s) 615
BcoDI GTCTC 2 cut(s) 918, 1130
BfaI CTAG 2 cut(s) 402, 1272
BfmI CTRYAG 1 cut(s) 449
BfuAI ACCTGC 2 cut(s) 128, 1019
BisI GCNGC 5 cut(s) 386, 449, 921, 965, 1307
BlsI GCNGC 5 cut(s) 387, 450, 922, 966, 1308
BmcAI AGTACT 1 cut(s) 234
Bme1390I CCNGG 4 cut(s) 216, 615, 849, 1021
Bme18I GGWCC 1 cut(s) 959
BmeT110I CYCGRG 1 cut(s) 1043
BmgT120I GGNCC 1 cut(s) 959
BmiI GGNNCC 1 cut(s) 269
BmrFI CCNGG 4 cut(s) 216, 615, 849, 1021
BmsI GCATC 2 cut(s) 435, 523
BpiI GAAGAC 1 cut(s) 48
BpmI CTGGAG 1 cut(s) 1082
Bpu10I CCTNAGC 1 cut(s) 797
Bpu14I TTCGAA 1 cut(s) 8
BpuEI CTTGAG 4 cut(s) 485, 655, 1144, 1151
BpuMI CCSGG 1 cut(s) 615
BsaJI CCNNGG 4 cut(s) 380, 613, 807, 1328
BsaWI WCCGGW 2 cut(s) 61, 529
Bsc4I CCNNNNNNNGG 1 cut(s) 994
BseAI TCCGGA 1 cut(s) 529
BseBI CCWGG 3 cut(s) 216, 849, 1021
BseDI CCNNGG 4 cut(s) 380, 613, 807, 1328
BseGI GGATG 3 cut(s) 70, 538, 702
BseLI CCNNNNNNNGG 1 cut(s) 994
BseMII CTCAG 2 cut(s) 1215, 1296
BseRI GAGGAG 1 cut(s) 1006
BseSI GKGCMC 1 cut(s) 292
BseXI GCAGC 5 cut(s) 397, 435, 932, 951, 1318
BsgI GTGCAG 2 cut(s) 555, 636
Bsh1236I CGCG 1 cut(s) 340
BsiHKCI CYCGRG 1 cut(s) 1043
BsiSI CCGG 3 cut(s) 62, 530, 615
BsiWI CGTACG 1 cut(s) 1180
BslI CCNNNNNNNGG 1 cut(s) 994
BsmAI GTCTC 2 cut(s) 918, 1130
BsmI GAATGC 1 cut(s) 790
BsoBI CYCGRG 1 cut(s) 1043
Bsp119I TTCGAA 1 cut(s) 8
Bsp1286I GDGCHC 1 cut(s) 292
Bsp13I TCCGGA 1 cut(s) 529
Bsp143I GATC 6 cut(s) 48, 226, 745, 844, 1102, 1117
Bsp19I CCATGG 1 cut(s) 380
BspACI CCGC 3 cut(s) 536, 962, 1217
BspCNI CTCAG 2 cut(s) 1214, 1295
BspEI TCCGGA 1 cut(s) 529
BspFNI CGCG 1 cut(s) 340
BspHI TCATGA 1 cut(s) 1105
BspLI GGNNCC 1 cut(s) 269
BspMAI CTGCAG 1 cut(s) 453
BspMI ACCTGC 2 cut(s) 128, 1019
BspPI GGATC 4 cut(s) 56, 234, 753, 839
BspT104I TTCGAA 1 cut(s) 8
BssECI CCNNGG 4 cut(s) 380, 613, 807, 1328
BssMI GATC 6 cut(s) 48, 226, 745, 844, 1102, 1117
BssSI CACGAG 1 cut(s) 243
BssT1I CCWWGG 3 cut(s) 380, 807, 1328
Bst2BI CACGAG 1 cut(s) 243
Bst2UI CCWGG 3 cut(s) 216, 849, 1021
Bst4CI ACNGT 4 cut(s) 718, 1174, 1241, 1264
BstBI TTCGAA 1 cut(s) 8
BstC8I GCNNGC 2 cut(s) 31, 872
BstDEI CTNAG 4 cut(s) 797, 969, 1201, 1282
BstDSI CCRYGG 1 cut(s) 380
BstF5I GGATG 3 cut(s) 70, 538, 702
BstFNI CGCG 1 cut(s) 340
BstKTI GATC 6 cut(s) 51, 229, 748, 847, 1105, 1120
BstMAI GTCTC 2 cut(s) 918, 1130
BstMBI GATC 6 cut(s) 48, 226, 745, 844, 1102, 1117
BstNI CCWGG 3 cut(s) 216, 849, 1021
BstNSI RCATGY 3 cut(s) 33, 210, 1231
BstSCI CCNGG 4 cut(s) 214, 613, 847, 1019
BstSFI CTRYAG 1 cut(s) 449
BstSLI GKGCMC 1 cut(s) 292
BstUI CGCG 1 cut(s) 340
BstV1I GCAGC 5 cut(s) 397, 435, 932, 951, 1318
BstV2I GAAGAC 1 cut(s) 48
BstX2I RGATCY 1 cut(s) 745
BstXI CCANNNNNNTGG 1 cut(s) 381
BstYI RGATCY 1 cut(s) 745
BtgI CCRYGG 1 cut(s) 380
BtgZI GCGATG 1 cut(s) 851
BtsCI GGATG 3 cut(s) 70, 538, 702
BtsI GCAGTG 1 cut(s) 327
BtsIMutI CAGTG 3 cut(s) 58, 327, 1028
BveI ACCTGC 2 cut(s) 128, 1019
Cac8I GCNNGC 2 cut(s) 31, 872
CciI TCATGA 1 cut(s) 1105
Cfr13I GGNCC 1 cut(s) 959
CseI GACGC 2 cut(s) 112, 433
Csp6I GTAC 4 cut(s) 233, 998, 1181, 1225
CviAII CATG 9 cut(s) 30, 207, 308, 381, 415, 751, 1097, 1106, 1228
CviQI GTAC 4 cut(s) 233, 998, 1181, 1225
DdeI CTNAG 4 cut(s) 797, 969, 1201, 1282
DpnI GATC 6 cut(s) 50, 228, 747, 846, 1104, 1119
DpnII GATC 6 cut(s) 48, 226, 745, 844, 1102, 1117
Eco130I CCWWGG 3 cut(s) 380, 807, 1328
Eco32I GATATC 3 cut(s) 460, 836, 1050
Eco47I GGWCC 1 cut(s) 959
Eco57I CTGAAG 1 cut(s) 1253
Eco88I CYCGRG 1 cut(s) 1043
EcoRI GAATTC 1 cut(s) 258
EcoRII CCWGG 3 cut(s) 214, 847, 1019
EcoRV GATATC 3 cut(s) 460, 836, 1050
EcoT14I CCWWGG 3 cut(s) 380, 807, 1328
EcoT22I ATGCAT 1 cut(s) 35
ErhI CCWWGG 3 cut(s) 380, 807, 1328
FaeI CATG 9 cut(s) 33, 210, 311, 384, 418, 754, 1100, 1109, 1231
FatI CATG 9 cut(s) 29, 206, 307, 380, 414, 750, 1096, 1105, 1227
FbaI TGATCA 1 cut(s) 1117
Fnu4HI GCNGC 5 cut(s) 386, 449, 921, 965, 1307
FokI GGATG 3 cut(s) 77, 545, 709
Fsp4HI GCNGC 5 cut(s) 386, 449, 921, 965, 1307
FspBI CTAG 2 cut(s) 402, 1272
GluI GCNGC 5 cut(s) 386, 449, 921, 965, 1307
GsuI CTGGAG 1 cut(s) 1082
HapII CCGG 3 cut(s) 62, 530, 615
HgaI GACGC 2 cut(s) 112, 433
Hin1II CATG 9 cut(s) 33, 210, 311, 384, 418, 754, 1100, 1109, 1231
HincII GTYRAC 1 cut(s) 1130
HindII GTYRAC 1 cut(s) 1130
HindIII AAGCTT 1 cut(s) 551
HinfI GANTC 6 cut(s) 200, 539, 626, 1066, 1138, 1188
HpaII CCGG 3 cut(s) 62, 530, 615
HphI GGTGA 5 cut(s) 180, 442, 1044, 1231, 1253
Hpy166II GTNNAC 2 cut(s) 188, 1130
Hpy188I TCNGA 5 cut(s) 199, 484, 1193, 1204, 1251
Hpy188III TCNNGA 7 cut(s) 255, 530, 634, 1045, 1061, 1106, 1168
Hpy8I GTNNAC 2 cut(s) 188, 1130
Hpy99I CGWCG 1 cut(s) 353
HpyAV CCTTC 1 cut(s) 100
HpyCH4III ACNGT 4 cut(s) 718, 1174, 1241, 1264
HpyCH4IV ACGT 3 cut(s) 513, 740, 1000
HpyF3I CTNAG 4 cut(s) 797, 969, 1201, 1282
HpySE526I ACGT 3 cut(s) 513, 740, 1000
Hsp92II CATG 9 cut(s) 33, 210, 311, 384, 418, 754, 1100, 1109, 1231
Kpn2I TCCGGA 1 cut(s) 529
Ksp22I TGATCA 1 cut(s) 1117
Kzo9I GATC 6 cut(s) 48, 226, 745, 844, 1102, 1117
LmnI GCTCC 3 cut(s) 730, 928, 1019
Lsp1109I GCAGC 5 cut(s) 397, 435, 932, 951, 1318
LweI GCATC 2 cut(s) 435, 523
MaeI CTAG 2 cut(s) 402, 1272
MaeII ACGT 3 cut(s) 513, 740, 1000
MaeIII GTNAC 1 cut(s) 1258
MalI GATC 6 cut(s) 50, 228, 747, 846, 1104, 1119
MboI GATC 6 cut(s) 48, 226, 745, 844, 1102, 1117
MboII GAAGA 5 cut(s) 53, 154, 559, 590, 793
MflI RGATCY 1 cut(s) 745
MhlI GDGCHC 1 cut(s) 292
MluCI AATT 8 cut(s) 145, 258, 277, 757, 891, 950, 979, 1350
MluI ACGCGT 1 cut(s) 338
MlyI GAGTC 3 cut(s) 194, 533, 1132
MmeI TCCRAC 2 cut(s) 674, 723
MnlI CCTC 7 cut(s) 30, 518, 693, 956, 988, 1027, 1175
Mph1103I ATGCAT 1 cut(s) 35
MroI TCCGGA 1 cut(s) 529
MseI TTAA 4 cut(s) 276, 641, 903, 1005
MslI CAYNNNNRTG 2 cut(s) 136, 312
MspA1I CMGCKG 2 cut(s) 110, 964
MspI CCGG 3 cut(s) 62, 530, 615
MspR9I CCNGG 4 cut(s) 216, 615, 849, 1021
Mva1269I GAATGC 1 cut(s) 790
MvaI CCWGG 3 cut(s) 216, 849, 1021
MvnI CGCG 1 cut(s) 340
NciI CCSGG 1 cut(s) 615
NcoI CCATGG 1 cut(s) 380
NdeII GATC 6 cut(s) 48, 226, 745, 844, 1102, 1117
NlaIII CATG 9 cut(s) 33, 210, 311, 384, 418, 754, 1100, 1109, 1231
NlaIV GGNNCC 1 cut(s) 269
NmuCI GTSAC 1 cut(s) 1258
NsiI ATGCAT 1 cut(s) 35
NspI RCATGY 3 cut(s) 33, 210, 1231
NspV TTCGAA 1 cut(s) 8
PaeI GCATGC 1 cut(s) 33
PaeR7I CTCGAG 1 cut(s) 1043
PagI TCATGA 1 cut(s) 1105
PciI ACATGT 1 cut(s) 206
PctI GAATGC 1 cut(s) 790
PfeI GAWTC 3 cut(s) 626, 1066, 1188
Pfl23II CGTACG 1 cut(s) 1180
PfoI TCCNGGA 2 cut(s) 214, 1019
PkrI GCNGC 5 cut(s) 387, 450, 922, 966, 1308
PleI GAGTC 3 cut(s) 194, 533, 1132
PpsI GAGTC 3 cut(s) 194, 533, 1132
PscI ACATGT 1 cut(s) 206
Psp1406I AACGTT 1 cut(s) 740
Psp6I CCWGG 3 cut(s) 214, 847, 1019
PspGI CCWGG 3 cut(s) 214, 847, 1019
PspLI CGTACG 1 cut(s) 1180
PspN4I GGNNCC 1 cut(s) 269
PspPI GGNCC 1 cut(s) 959
PstI CTGCAG 1 cut(s) 453
PsuI RGATCY 1 cut(s) 745
PvuII CAGCTG 1 cut(s) 110
RsaI GTAC 4 cut(s) 234, 999, 1182, 1226
RsaNI GTAC 4 cut(s) 233, 998, 1181, 1225
RseI CAYNNNNRTG 2 cut(s) 136, 312
SaqAI TTAA 4 cut(s) 276, 641, 903, 1005
SatI GCNGC 5 cut(s) 386, 449, 921, 965, 1307
Sau3AI GATC 6 cut(s) 48, 226, 745, 844, 1102, 1117
Sau96I GGNCC 1 cut(s) 959
ScaI AGTACT 1 cut(s) 234
SchI GAGTC 3 cut(s) 194, 533, 1132
ScrFI CCNGG 4 cut(s) 216, 615, 849, 1021
SduI GDGCHC 1 cut(s) 292
SfaNI GCATC 2 cut(s) 435, 523
SfcI CTRYAG 1 cut(s) 449
Sfr274I CTCGAG 1 cut(s) 1043
SfuI TTCGAA 1 cut(s) 8
SinI GGWCC 1 cut(s) 959
SlaI CTCGAG 1 cut(s) 1043
SmiMI CAYNNNNRTG 2 cut(s) 136, 312
SmlI CTYRAG 5 cut(s) 500, 634, 1043, 1159, 1166
SmoI CTYRAG 5 cut(s) 500, 634, 1043, 1159, 1166
SphI GCATGC 1 cut(s) 33
Sse9I AATT 8 cut(s) 145, 258, 277, 757, 891, 950, 979, 1350
SsiI CCGC 3 cut(s) 536, 962, 1217
SspI AATATT 1 cut(s) 299
SspMI CTAG 2 cut(s) 402, 1272
StyD4I CCNGG 4 cut(s) 214, 613, 847, 1019
StyI CCWWGG 3 cut(s) 380, 807, 1328
TaaI ACNGT 4 cut(s) 718, 1174, 1241, 1264
TaiI ACGT 3 cut(s) 516, 743, 1003
TaqI TCGA 7 cut(s) 8, 229, 351, 456, 948, 1044, 1089
TaqII GACCGA 1 cut(s) 619
TasI AATT 8 cut(s) 145, 258, 277, 757, 891, 950, 979, 1350
TatI WGTACW 2 cut(s) 232, 1224
TfiI GAWTC 3 cut(s) 626, 1066, 1188
Tru1I TTAA 4 cut(s) 276, 641, 903, 1005
Tru9I TTAA 4 cut(s) 276, 641, 903, 1005
TscAI CASTG 3 cut(s) 58, 334, 1035
TseFI GTSAC 1 cut(s) 1258
TseI GCWGC 5 cut(s) 385, 448, 920, 964, 1306
Tsp45I GTSAC 1 cut(s) 1258
TspDTI ATGAA 6 cut(s) 54, 81, 228, 251, 403, 560
TspRI CASTG 3 cut(s) 58, 334, 1035
VpaK11BI GGWCC 1 cut(s) 959
XapI RAATTY 4 cut(s) 145, 258, 757, 950
XceI RCATGY 3 cut(s) 33, 210, 1231
XhoI CTCGAG 1 cut(s) 1043
XspI CTAG 2 cut(s) 402, 1272
ZrmI AGTACT 1 cut(s) 234
Zsp2I ATGCAT 1 cut(s) 35
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.