Rmu_sc0002925.1_g000003

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002925.1
OG0000079
Physical Location & Seq
Reverse (-)
6399 .. 7955
1557 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002925.1_g000003.1.cds

Sequence Viewer

Length: 1311 bp
atggatgcgatcgataggatcagcgcattgccagatgcactcattagtcacatactttcctcacttccaacattagatgccgtgaggaccacttttttgtctagaagatcgatggaacaaccagtggactttgatgagggtaaccgttattttagttctactcacagcagtgaccgtgattggtttactaggtttgttaatcgtgtacttgtttctcgagactcatcagatatccacaagttcactgttcttttcgacagggctcattatcgtcataatcctagcattgtcgattggatttgcactgctcttaggcacaatgtggttgcactccgacttaaatataaagaggggactagtattcaaatgcctccaactgtttttacatgcaaaacactgcggattttgaccttgcacttcagtggtaggtatattacttttgatcctcctacatccgggtgtttccccagtctcgagtccctcgaacttacagttcaagatcctgttgagcacgaaatggaaaagcttttttcttcctgccctaagcttgtttatctgagcgtaaggatcgtttcagtaattgctgcctttaatttcaaggtctctgcgcctgagctgaagcaattgaagataatatcatattgtcctgggcctcagttttatgttgatgccccaaagcttgaaaatcttgatcttttctgttcgttccctcagccaaatttgtttttggaaaatgcaaaatctctggtcacagctgctgttgttctcaaaaagaattacgagctcttccttataggacatgcctttcccaacagtctcaatatgcttctggctcaaatttctgaggtcaaatatctgtctctttcggctcctattccagtggattgctgcttccctgcttttggtaatttgaccaaattggagttggttcttgacctttacaattactggaaattgctaacagttgtgctccaaaaagtccctaatctggaatatctttctttagaagaaaaaggtataggtgatcatgaatggtcattcaatctacctgaggttgtgccttcatgtttgtcatcacatctgaagagtatctatatgaggaaattcaaggggcggcggtctgagatgaaaatggccgagtatttgttaaaaaatggttatcatttgaatcggttcacaatatgctatactggtgttttggacttgtttcggagggcaataacttgttctattcaatttcttatgagtgaagattttctccaagggcagaaggcctatgttgatggctttaaaactactctttttgactga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

436

Amino Acids

49.95

Weight (kDa)

7.94

Isoelectric Point (pI)

42.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 400, 1114, 1117
AclWI GGATC 4 cut(s) 26, 437, 494, 575
AcoI YGGCCR 1 cut(s) 1134
AcsI RAATTY 3 cut(s) 718, 837, 1103
AcuI CTGAAG 3 cut(s) 403, 638, 1103
AdeI CACNNNGTG 1 cut(s) 322
AfaI GTAC 1 cut(s) 207
AfiI CCNNNNNNNGG 3 cut(s) 455, 902, 988
AgsI TTSAA 9 cut(s) 365, 497, 598, 628, 683, 1042, 1108, 1168, 1235
AhlI ACTAGT 1 cut(s) 356
AjnI CCWGG 1 cut(s) 646
AleI CACNNNNGTG 2 cut(s) 168, 420
AluBI AGCT 6 cut(s) 526, 547, 616, 679, 755, 784
AluI AGCT 6 cut(s) 526, 547, 616, 679, 755, 784
Alw21I GWGCWC 3 cut(s) 513, 786, 972
Alw26I GTCTC 5 cut(s) 213, 476, 607, 821, 864
AlwI GGATC 4 cut(s) 26, 437, 494, 575
AlwNI CAGNNNCTG 1 cut(s) 758
Ama87I CYCGRG 2 cut(s) 216, 473
AoxI GGCC 3 cut(s) 650, 1134, 1272
ApeKI GCWGC 3 cut(s) 584, 755, 888
ApoI RAATTY 3 cut(s) 718, 837, 1103
ArsI GACNNNNNNTTYG 2 cut(s) 79, 111
Asp700I GAANNNNTTC 2 cut(s) 1172, 1254
AspLEI GCGC 2 cut(s) 26, 610
AspS9I GGNCC 2 cut(s) 87, 650
AsuC2I CCSGG 1 cut(s) 457
AsuHPI GGTGA 1 cut(s) 1034
AvaI CYCGRG 2 cut(s) 216, 473
AvaII GGWCC 1 cut(s) 87
AxyI CCTNAGG 1 cut(s) 1050
BanII GRGCYC 2 cut(s) 265, 786
Bbv12I GWGCWC 3 cut(s) 513, 786, 972
BbvCI CCTCAGC 1 cut(s) 711
BbvI GCAGC 3 cut(s) 571, 742, 875
BccI CCATC 2 cut(s) 106, 1277
BceAI ACGGC 1 cut(s) 65
BciT130I CCWGG 1 cut(s) 648
BclI TGATCA 1 cut(s) 1024
BcnI CCSGG 1 cut(s) 457
BcoDI GTCTC 5 cut(s) 213, 476, 607, 821, 864
BcuI ACTAGT 1 cut(s) 356
BfaI CTAG 4 cut(s) 102, 189, 282, 357
BisI GCNGC 4 cut(s) 585, 756, 889, 1115
BlsI GCNGC 4 cut(s) 586, 757, 890, 1116
Bme1390I CCNGG 2 cut(s) 457, 648
Bme18I GGWCC 1 cut(s) 87
BmeT110I CYCGRG 2 cut(s) 216, 473
BmgT120I GGNCC 2 cut(s) 87, 650
BmiI GGNNCC 1 cut(s) 870
BmrFI CCNGG 2 cut(s) 457, 648
BmrI ACTGGG 1 cut(s) 462
BmsI GCATC 3 cut(s) 25, 67, 658
BmuI ACTGGG 1 cut(s) 462
Bpu10I CCTNAGC 3 cut(s) 543, 612, 711
BpuMI CCSGG 1 cut(s) 457
Bsa29I ATCGAT 2 cut(s) 12, 110
BsaI GGTCTC 1 cut(s) 607
BsaJI CCNNGG 2 cut(s) 647, 1261
Bsc4I CCNNNNNNNGG 3 cut(s) 455, 902, 988
Bse1I ACTGG 5 cut(s) 122, 468, 878, 953, 1195
Bse21I CCTNAGG 1 cut(s) 1050
Bse3DI GCAATG 1 cut(s) 26
BseBI CCWGG 1 cut(s) 648
BseCI ATCGAT 2 cut(s) 12, 110
BseDI CCNNGG 2 cut(s) 647, 1261
BseGI GGATG 2 cut(s) 10, 452
BseLI CCNNNNNNNGG 3 cut(s) 455, 902, 988
BseMI GCAATG 1 cut(s) 26
BseMII CTCAG 7 cut(s) 548, 603, 668, 725, 834, 1041, 1113
BseNI ACTGG 5 cut(s) 122, 468, 878, 953, 1195
BseXI GCAGC 3 cut(s) 571, 742, 875
Bsh1285I CGRYCG 1 cut(s) 12
BshFI GGCC 3 cut(s) 652, 1136, 1274
BshVI ATCGAT 2 cut(s) 12, 110
BsiEI CGRYCG 1 cut(s) 12
BsiHKAI GWGCWC 3 cut(s) 513, 786, 972
BsiHKCI CYCGRG 2 cut(s) 216, 473
BsiSI CCGG 1 cut(s) 456
BslFI GGGAC 3 cut(s) 367, 463, 965
BslI CCNNNNNNNGG 3 cut(s) 455, 902, 988
BsmAI GTCTC 5 cut(s) 213, 476, 607, 821, 864
BsmFI GGGAC 3 cut(s) 367, 463, 965
BsnI GGCC 3 cut(s) 652, 1136, 1274
Bso31I GGTCTC 1 cut(s) 607
BsoBI CYCGRG 2 cut(s) 216, 473
Bsp1286I GDGCHC 4 cut(s) 265, 513, 786, 972
Bsp143I GATC 8 cut(s) 9, 18, 107, 442, 499, 567, 691, 1024
BspACI CCGC 3 cut(s) 400, 1114, 1117
BspANI GGCC 3 cut(s) 652, 1136, 1274
BspCNI CTCAG 7 cut(s) 549, 604, 667, 724, 835, 1042, 1114
BspDI ATCGAT 2 cut(s) 12, 110
BspHI TCATGA 1 cut(s) 1027
BspLI GGNNCC 1 cut(s) 870
BspPI GGATC 4 cut(s) 26, 437, 494, 575
BspQI GCTCTTC 1 cut(s) 791
BspTNI GGTCTC 1 cut(s) 607
BsrDI GCAATG 1 cut(s) 26
BsrI ACTGG 5 cut(s) 122, 468, 878, 953, 1195
BssECI CCNNGG 2 cut(s) 647, 1261
BssMI GATC 8 cut(s) 9, 18, 107, 442, 499, 567, 691, 1024
BssT1I CCWWGG 1 cut(s) 1261
Bst2UI CCWGG 1 cut(s) 648
Bst4CI ACNGT 7 cut(s) 146, 176, 247, 379, 493, 815, 964
Bst6I CTCTTC 2 cut(s) 791, 1079
BstDEI CTNAG 9 cut(s) 311, 543, 557, 612, 654, 711, 843, 1050, 1122
BstEII GGTNACC 1 cut(s) 140
BstF5I GGATG 2 cut(s) 10, 452
BstHHI GCGC 2 cut(s) 26, 610
BstKTI GATC 8 cut(s) 12, 21, 110, 445, 502, 570, 694, 1027
BstMAI GTCTC 5 cut(s) 213, 476, 607, 821, 864
BstMBI GATC 8 cut(s) 9, 18, 107, 442, 499, 567, 691, 1024
BstMCI CGRYCG 1 cut(s) 12
BstNI CCWGG 1 cut(s) 648
BstNSI RCATGY 2 cut(s) 390, 803
BstPI GGTNACC 1 cut(s) 140
BstSCI CCNGG 2 cut(s) 455, 646
BstV1I GCAGC 3 cut(s) 571, 742, 875
BstX2I RGATCY 1 cut(s) 499
BstYI RGATCY 1 cut(s) 499
Bsu15I ATCGAT 2 cut(s) 12, 110
Bsu36I CCTNAGG 1 cut(s) 1050
BsuRI GGCC 3 cut(s) 652, 1136, 1274
BsuTUI ATCGAT 2 cut(s) 12, 110
BtsCI GGATG 2 cut(s) 10, 452
BtsI GCAGTG 3 cut(s) 175, 303, 395
BtsIMutI CAGTG 7 cut(s) 129, 175, 243, 303, 395, 427, 885
CaiI CAGNNNCTG 1 cut(s) 758
CciI TCATGA 1 cut(s) 1027
CfoI GCGC 2 cut(s) 26, 610
Cfr13I GGNCC 2 cut(s) 87, 650
ClaI ATCGAT 2 cut(s) 12, 110
Csp6I GTAC 1 cut(s) 206
CviAII CATG 4 cut(s) 387, 800, 1028, 1065
CviQI GTAC 1 cut(s) 206
DdeI CTNAG 9 cut(s) 311, 543, 557, 612, 654, 711, 843, 1050, 1122
DpnI GATC 8 cut(s) 11, 20, 109, 444, 501, 569, 693, 1026
DpnII GATC 8 cut(s) 9, 18, 107, 442, 499, 567, 691, 1024
DraI TTTAAA 1 cut(s) 1291
DraIII CACNNNGTG 1 cut(s) 322
EaeI YGGCCR 1 cut(s) 1134
Eam1104I CTCTTC 2 cut(s) 791, 1079
EarI CTCTTC 2 cut(s) 791, 1079
Ecl136II GAGCTC 1 cut(s) 784
Eco130I CCWWGG 1 cut(s) 1261
Eco147I AGGCCT 1 cut(s) 1274
Eco24I GRGCYC 2 cut(s) 265, 786
Eco31I GGTCTC 1 cut(s) 607
Eco32I GATATC 1 cut(s) 232
Eco47I GGWCC 1 cut(s) 87
Eco53kI GAGCTC 1 cut(s) 784
Eco57I CTGAAG 3 cut(s) 403, 638, 1103
Eco81I CCTNAGG 1 cut(s) 1050
Eco88I CYCGRG 2 cut(s) 216, 473
Eco91I GGTNACC 1 cut(s) 140
EcoICRI GAGCTC 1 cut(s) 784
EcoO65I GGTNACC 1 cut(s) 140
EcoRII CCWGG 1 cut(s) 646
EcoRV GATATC 1 cut(s) 232
EcoT14I CCWWGG 1 cut(s) 1261
EcoT38I GRGCYC 2 cut(s) 265, 786
ErhI CCWWGG 1 cut(s) 1261
FaeI CATG 4 cut(s) 390, 803, 1031, 1068
FaqI GGGAC 3 cut(s) 367, 463, 965
FatI CATG 4 cut(s) 386, 799, 1027, 1064
FbaI TGATCA 1 cut(s) 1024
Fnu4HI GCNGC 4 cut(s) 585, 756, 889, 1115
FokI GGATG 2 cut(s) 17, 439
FriOI GRGCYC 2 cut(s) 265, 786
Fsp4HI GCNGC 4 cut(s) 585, 756, 889, 1115
FspBI CTAG 4 cut(s) 102, 189, 282, 357
GlaI GCGC 2 cut(s) 25, 609
GluI GCNGC 4 cut(s) 585, 756, 889, 1115
HaeIII GGCC 3 cut(s) 652, 1136, 1274
HapII CCGG 1 cut(s) 456
HhaI GCGC 2 cut(s) 26, 610
Hin1II CATG 4 cut(s) 390, 803, 1031, 1068
Hin6I GCGC 2 cut(s) 24, 608
HinP1I GCGC 2 cut(s) 24, 608
HindIII AAGCTT 3 cut(s) 524, 545, 677
HinfI GANTC 3 cut(s) 221, 476, 1168
HpaII CCGG 1 cut(s) 456
HphI GGTGA 1 cut(s) 1034
Hpy166II GTNNAC 5 cut(s) 127, 186, 206, 243, 1176
Hpy188I TCNGA 7 cut(s) 229, 335, 558, 844, 1083, 1123, 1212
Hpy188III TCNNGA 9 cut(s) 102, 216, 218, 473, 497, 689, 932, 989, 1028
Hpy8I GTNNAC 5 cut(s) 127, 186, 206, 243, 1176
HpyAV CCTTC 2 cut(s) 1071, 1264
HpyCH4III ACNGT 7 cut(s) 146, 176, 247, 379, 493, 815, 964
HpyCH4V TGCA 6 cut(s) 38, 303, 329, 390, 415, 737
HpyF3I CTNAG 9 cut(s) 311, 543, 557, 612, 654, 711, 843, 1050, 1122
Hsp92II CATG 4 cut(s) 390, 803, 1031, 1068
HspAI GCGC 2 cut(s) 24, 608
Ksp22I TGATCA 1 cut(s) 1024
Kzo9I GATC 8 cut(s) 9, 18, 107, 442, 499, 567, 691, 1024
LguI GCTCTTC 1 cut(s) 791
LmnI GCTCC 2 cut(s) 874, 975
Lsp1109I GCAGC 3 cut(s) 571, 742, 875
LweI GCATC 3 cut(s) 25, 67, 658
MaeI CTAG 4 cut(s) 102, 189, 282, 357
MaeIII GTNAC 4 cut(s) 47, 140, 170, 748
MalI GATC 8 cut(s) 11, 20, 109, 444, 501, 569, 693, 1026
MboI GATC 8 cut(s) 9, 18, 107, 442, 499, 567, 691, 1024
MboII GAAGA 7 cut(s) 117, 525, 640, 778, 1019, 1096, 1262
MfeI CAATTG 1 cut(s) 623
MflI RGATCY 1 cut(s) 499
MhlI GDGCHC 4 cut(s) 265, 513, 786, 972
MlyI GAGTC 2 cut(s) 215, 485
MmeI TCCRAC 3 cut(s) 92, 358, 398
MroXI GAANNNNTTC 2 cut(s) 1172, 1254
MseI TTAA 5 cut(s) 198, 339, 591, 1148, 1290
MslI CAYNNNNRTG 3 cut(s) 168, 420, 457
MspA1I CMGCKG 1 cut(s) 755
MspI CCGG 1 cut(s) 456
MspR9I CCNGG 2 cut(s) 457, 648
MunI CAATTG 1 cut(s) 623
MvaI CCWGG 1 cut(s) 648
NciI CCSGG 1 cut(s) 457
NdeII GATC 8 cut(s) 9, 18, 107, 442, 499, 567, 691, 1024
NlaIII CATG 4 cut(s) 390, 803, 1031, 1068
NlaIV GGNNCC 1 cut(s) 870
NmeAIII GCCGAG 1 cut(s) 1162
NmuCI GTSAC 3 cut(s) 47, 170, 748
NspI RCATGY 2 cut(s) 390, 803
OliI CACNNNNGTG 2 cut(s) 168, 420
PaeR7I CTCGAG 2 cut(s) 216, 473
PagI TCATGA 1 cut(s) 1027
PceI AGGCCT 1 cut(s) 1274
PciSI GCTCTTC 1 cut(s) 791
PcsI WCGNNNNNNNCGW 1 cut(s) 480
PdmI GAANNNNTTC 2 cut(s) 1172, 1254
PfeI GAWTC 1 cut(s) 1168
PkrI GCNGC 4 cut(s) 586, 757, 890, 1116
Ple19I CGATCG 1 cut(s) 12
PleI GAGTC 2 cut(s) 215, 484
PpsI GAGTC 2 cut(s) 215, 484
Psp124BI GAGCTC 1 cut(s) 786
Psp6I CCWGG 1 cut(s) 646
PspEI GGTNACC 1 cut(s) 140
PspGI CCWGG 1 cut(s) 646
PspN4I GGNNCC 1 cut(s) 870
PspPI GGNCC 2 cut(s) 87, 650
PstNI CAGNNNCTG 1 cut(s) 758
PsuI RGATCY 1 cut(s) 499
PvuI CGATCG 1 cut(s) 12
PvuII CAGCTG 1 cut(s) 755
RsaI GTAC 1 cut(s) 207
RsaNI GTAC 1 cut(s) 206
RseI CAYNNNNRTG 3 cut(s) 168, 420, 457
SacI GAGCTC 1 cut(s) 786
SapI GCTCTTC 1 cut(s) 791
SaqAI TTAA 5 cut(s) 198, 339, 591, 1148, 1290
SatI GCNGC 4 cut(s) 585, 756, 889, 1115
Sau3AI GATC 8 cut(s) 9, 18, 107, 442, 499, 567, 691, 1024
Sau96I GGNCC 2 cut(s) 87, 650
SchI GAGTC 2 cut(s) 215, 485
ScrFI CCNGG 2 cut(s) 457, 648
SduI GDGCHC 4 cut(s) 265, 513, 786, 972
SfaNI GCATC 3 cut(s) 25, 67, 658
Sfr274I CTCGAG 2 cut(s) 216, 473
SinI GGWCC 1 cut(s) 87
SlaI CTCGAG 2 cut(s) 216, 473
SmiMI CAYNNNNRTG 3 cut(s) 168, 420, 457
SmlI CTYRAG 2 cut(s) 216, 473
SmoI CTYRAG 2 cut(s) 216, 473
SpeI ACTAGT 1 cut(s) 356
SseBI AGGCCT 1 cut(s) 1274
SsiI CCGC 3 cut(s) 400, 1114, 1117
SspMI CTAG 4 cut(s) 102, 189, 282, 357
SstI GAGCTC 1 cut(s) 786
StuI AGGCCT 1 cut(s) 1274
StyD4I CCNGG 2 cut(s) 455, 646
StyI CCWWGG 1 cut(s) 1261
TaaI ACNGT 7 cut(s) 146, 176, 247, 379, 493, 815, 964
TaqI TCGA 7 cut(s) 12, 110, 217, 255, 291, 474, 483
TatI WGTACW 1 cut(s) 205
TauI GCSGC 1 cut(s) 1117
TfiI GAWTC 1 cut(s) 1168
Tru1I TTAA 5 cut(s) 198, 339, 591, 1148, 1290
Tru9I TTAA 5 cut(s) 198, 339, 591, 1148, 1290
TscAI CASTG 7 cut(s) 129, 175, 250, 310, 402, 427, 885
TseFI GTSAC 3 cut(s) 47, 170, 748
TseI GCWGC 3 cut(s) 584, 755, 888
Tsp45I GTSAC 3 cut(s) 47, 170, 748
TspDTI ATGAA 3 cut(s) 1044, 1053, 1142
TspRI CASTG 7 cut(s) 129, 175, 250, 310, 402, 427, 885
VpaK11BI GGWCC 1 cut(s) 87
XapI RAATTY 3 cut(s) 718, 837, 1103
XbaI TCTAGA 1 cut(s) 101
XceI RCATGY 2 cut(s) 390, 803
XcmI CCANNNNNNNNNTGG 1 cut(s) 922
XhoI CTCGAG 2 cut(s) 216, 473
XmnI GAANNNNTTC 2 cut(s) 1172, 1254
XspI CTAG 4 cut(s) 102, 189, 282, 357
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.