MD03G1276400.v1.1

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0000079
Physical Location & Seq
Forward (+)
35885345 .. 35887250
1906 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1276400.v1.1.491

Sequence Viewer

Length: 1425 bp
ATGTCGTTAAAAGCATGTATTGGAGATAGGATAAGTGGATTGCCAGATGAAATTATTTGCCACATTCTTTCATTCCTTATAACAGAGGAAGCTGTAAAGACTAGCGTTTTATCACGTAGATGGAAGAATGTATGGGCTTATAATCCCAATATTGACCTATGCGATCTCGGATGTGGAAGAAGGATTAATTCAGATAATTTTGAGGGAATCGTGAATCTTGTACTTCTCTCACGTGGCTCCTTAGACATTCATAGATTCAGTCTTACTTGTGAGGATTTTGTGAACTATTCTTGTTTTGACGTTTGGATTCGCAGTGCCGTTAGTCACAATGTTGTTGAACTAGTACTTGATCTTGTTGATGGGGGTTTCAGCCAAAAACTGGATCTTATTGATGGGGAGACCGTGTCCTATTACGTGTGTTTTGAGTTGCCAAAAAGCTTGTACATGTGCAACACATTGGTGGTGTTGAAGCTAAGACTCCAACCTTCTTTTACCATTACTCCTCCGTCAAACTGTTTCCCAAGTCTCAAGTTTCTCAAACTCATGTTCGATTGTCTTGATATTGACTCAATGGAGAAGCTCATTTCTTGTTGCCCTGTACTGGAAGATTTGAATATAGATTGCAAACTCGTCGATCTTGATGAGTTTCCAGTATTGAGGTTCAATATCTCCGCACTGAAACTAAACAAGTTACAAGTATATTTGTACCAAGGTACGTCTGAAATCCCTCGTGCATACCAAATATTTGTTAATGTCAATGCTCCAAGTCTCGAAAAGTTTGATCTCCAAGACGAATATATGGCGATCTATTCTTGGAACAAGGCAAAATCCTTAAGCAGAGCGAAGATTGATTTCAAACAGCTGCACCGGTTTCAGGGCATTGACAATGACTATATCCTTGAATCTGCTGATCGTATGCAAAGGCTTTTTGAAGGGTTGTTGTATGTTAAAGATCTTTCGGTTTCAGCTCCACTTTTTGGGGATCCAGATATAATGCATCAATATCATCTACCTACGTTTAATTATTTGAACCGCTTGGAGCTATTTCTTCATACATGCTGCTCTTGGAAACTACTGACAACTTTTCTCAAGAAATCACACAATCTGAAATATCTATTCCTTCAAAGTAACGCAAAGTGTTCAGCTTTTCGCCATGGTTGTGACTTTGTACACCATGTATGGTCTCCGCCAAGGTGGGTACCCGTTTGCTTGATGTCATGCCTCAAGAACATTTGCATAAAGGGATTCCGAGGACGAGCGGATGAAATGGAAGTGGTAAAGTACATGTTGAAGCAGGGTGAAGTCTTGAATAATGTGATAATATTTGCTTGTGATTTCTCTGTAAAAGACGAGATGAAGTTATGCCAGGAGATGTCAACGTTCCCAAGGGCTTCAAAGGCTTGTCAAATTGAATTTCGAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

475

Amino Acids

54.73

Weight (kDa)

6.6

Isoelectric Point (pI)

53.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 11 - 47 2.1e-07 F-box domain
LRR_At5g56370 PF24758 102 - 267 2.4e-12 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 398 - 441 2e-11 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 80, 141
Acc65I GGTACC 1 cut(s) 1198
AccB1I GGYRCC 1 cut(s) 1198
AccB7I CCANNNNNTGG 2 cut(s) 379, 977
AccBSI CCGCTC 1 cut(s) 1259
AciI CCGC 4 cut(s) 672, 1033, 1187, 1259
AclI AACGTT 1 cut(s) 1379
AclWI GGATC 3 cut(s) 390, 977, 990
AcsI RAATTY 1 cut(s) 1412
AcvI CACGTG 1 cut(s) 233
AfaI GTAC 9 cut(s) 222, 345, 443, 600, 707, 715, 1170, 1200, 1283
AfiI CCNNNNNNNGG 4 cut(s) 379, 601, 874, 977
AflII CTTAAG 1 cut(s) 832
AflIII ACRYGT 3 cut(s) 414, 444, 1284
AgeI ACCGGT 1 cut(s) 867
AhlI ACTAGT 1 cut(s) 340
AjnI CCWGG 1 cut(s) 1365
AleI CACNNNNGTG 1 cut(s) 458
AluBI AGCT 8 cut(s) 92, 438, 472, 580, 862, 968, 1042, 1145
AluI AGCT 8 cut(s) 92, 438, 472, 580, 862, 968, 1042, 1145
Alw26I GTCTC 4 cut(s) 392, 530, 773, 1188
AlwI GGATC 3 cut(s) 390, 977, 990
ApeKI GCWGC 2 cut(s) 862, 1059
ApoI RAATTY 1 cut(s) 1412
AseI ATTAAT 1 cut(s) 186
AsiGI ACCGGT 1 cut(s) 867
Asp718I GGTACC 1 cut(s) 1198
AsuHPI GGTGA 1 cut(s) 1310
AsuII TTCGAA 1 cut(s) 1417
BamHI GGATCC 1 cut(s) 982
BanI GGYRCC 1 cut(s) 1198
BauI CACGAG 1 cut(s) 729
BbrPI CACGTG 1 cut(s) 233
BbvI GCAGC 2 cut(s) 849, 1046
BccI CCATC 3 cut(s) 114, 353, 386
BceAI ACGGC 1 cut(s) 302
BcgI CGANNNNNNTGC 2 cut(s) 613, 647
BciT130I CCWGG 1 cut(s) 1367
BcoDI GTCTC 4 cut(s) 392, 530, 773, 1188
BcuI ACTAGT 1 cut(s) 340
BfaI CTAG 2 cut(s) 102, 341
BfrI CTTAAG 1 cut(s) 832
BglII AGATCT 1 cut(s) 952
BisI GCNGC 2 cut(s) 863, 1060
BlsI GCNGC 2 cut(s) 864, 1061
BmcAI AGTACT 1 cut(s) 345
Bme1390I CCNGG 1 cut(s) 1367
BmiI GGNNCC 3 cut(s) 238, 984, 1200
BmrFI CCNGG 1 cut(s) 1367
BmsI GCATC 1 cut(s) 1006
Bpu14I TTCGAA 1 cut(s) 1417
BpuEI CTTGAG 3 cut(s) 512, 1073, 1208
BsaAI YACGTR 3 cut(s) 116, 233, 415
BsaI GGTCTC 2 cut(s) 392, 1188
BsaJI CCNNGG 5 cut(s) 709, 1153, 1190, 1249, 1385
BsaWI WCCGGW 1 cut(s) 867
BsaXI ACNNNNNCTCC 4 cut(s) 389, 419, 484, 514
Bsc4I CCNNNNNNNGG 4 cut(s) 379, 601, 874, 977
Bse118I RCCGGY 1 cut(s) 867
Bse1I ACTGG 3 cut(s) 384, 606, 650
BseBI CCWGG 1 cut(s) 1367
BseDI CCNNGG 5 cut(s) 709, 1153, 1190, 1249, 1385
BseGI GGATG 2 cut(s) 176, 1267
BseLI CCNNNNNNNGG 4 cut(s) 379, 601, 874, 977
BseNI ACTGG 3 cut(s) 384, 606, 650
BseRI GAGGAG 1 cut(s) 492
BseXI GCAGC 2 cut(s) 849, 1046
BsgI GTGCAG 1 cut(s) 848
BshNI GGYRCC 1 cut(s) 1198
BshTI ACCGGT 1 cut(s) 867
BsiSI CCGG 1 cut(s) 868
BslI CCNNNNNNNGG 4 cut(s) 379, 601, 874, 977
BsmAI GTCTC 4 cut(s) 392, 530, 773, 1188
Bso31I GGTCTC 2 cut(s) 392, 1188
Bsp119I TTCGAA 1 cut(s) 1417
Bsp1407I TGTACA 2 cut(s) 441, 1168
Bsp143I GATC 9 cut(s) 163, 349, 382, 634, 781, 804, 910, 952, 982
Bsp19I CCATGG 1 cut(s) 1153
BspACI CCGC 4 cut(s) 672, 1033, 1187, 1259
BspLI GGNNCC 3 cut(s) 238, 984, 1200
BspPI GGATC 3 cut(s) 390, 977, 990
BspT104I TTCGAA 1 cut(s) 1417
BspT107I GGYRCC 1 cut(s) 1198
BspTI CTTAAG 1 cut(s) 832
BspTNI GGTCTC 2 cut(s) 392, 1188
BsrBI CCGCTC 1 cut(s) 1259
BsrFI RCCGGY 1 cut(s) 867
BsrGI TGTACA 2 cut(s) 441, 1168
BsrI ACTGG 3 cut(s) 384, 606, 650
BssAI RCCGGY 1 cut(s) 867
BssECI CCNNGG 5 cut(s) 709, 1153, 1190, 1249, 1385
BssMI GATC 9 cut(s) 163, 349, 382, 634, 781, 804, 910, 952, 982
BssSI CACGAG 1 cut(s) 729
BssT1I CCWWGG 4 cut(s) 709, 1153, 1190, 1385
Bst2BI CACGAG 1 cut(s) 729
Bst2UI CCWGG 1 cut(s) 1367
Bst4CI ACNGT 2 cut(s) 403, 515
BstAFI CTTAAG 1 cut(s) 832
BstAUI TGTACA 2 cut(s) 441, 1168
BstBAI YACGTR 3 cut(s) 116, 233, 415
BstBI TTCGAA 1 cut(s) 1417
BstDEI CTNAG 2 cut(s) 241, 473
BstDSI CCRYGG 1 cut(s) 1153
BstF5I GGATG 2 cut(s) 176, 1267
BstKTI GATC 9 cut(s) 166, 352, 385, 637, 784, 807, 913, 955, 985
BstMAI GTCTC 4 cut(s) 392, 530, 773, 1188
BstMBI GATC 9 cut(s) 163, 349, 382, 634, 781, 804, 910, 952, 982
BstMWI GCNNNNNNNGC 1 cut(s) 1397
BstNI CCWGG 1 cut(s) 1367
BstNSI RCATGY 4 cut(s) 18, 448, 1059, 1288
BstSCI CCNGG 1 cut(s) 1365
BstV1I GCAGC 2 cut(s) 849, 1046
BstX2I RGATCY 3 cut(s) 382, 952, 982
BstYI RGATCY 3 cut(s) 382, 952, 982
BtgI CCRYGG 1 cut(s) 1153
BtsCI GGATG 2 cut(s) 176, 1267
BtsI GCAGTG 1 cut(s) 319
BtsIMutI CAGTG 2 cut(s) 319, 674
Cfr10I RCCGGY 1 cut(s) 867
Csp6I GTAC 9 cut(s) 221, 344, 442, 599, 706, 714, 1169, 1199, 1282
CspAI ACCGGT 1 cut(s) 867
CviAII CATG 8 cut(s) 15, 445, 544, 1056, 1154, 1175, 1218, 1285
CviQI GTAC 9 cut(s) 221, 344, 442, 599, 706, 714, 1169, 1199, 1282
DdeI CTNAG 2 cut(s) 241, 473
DpnI GATC 9 cut(s) 165, 351, 384, 636, 783, 806, 912, 954, 984
DpnII GATC 9 cut(s) 163, 349, 382, 634, 781, 804, 910, 952, 982
EciI GGCGGA 1 cut(s) 1176
Eco130I CCWWGG 4 cut(s) 709, 1153, 1190, 1385
Eco31I GGTCTC 2 cut(s) 392, 1188
Eco72I CACGTG 1 cut(s) 233
EcoRII CCWGG 1 cut(s) 1365
EcoT14I CCWWGG 4 cut(s) 709, 1153, 1190, 1385
EcoT22I ATGCAT 1 cut(s) 999
ErhI CCWWGG 4 cut(s) 709, 1153, 1190, 1385
FaeI CATG 8 cut(s) 18, 448, 547, 1059, 1157, 1178, 1221, 1288
FatI CATG 8 cut(s) 14, 444, 543, 1055, 1153, 1174, 1217, 1284
Fnu4HI GCNGC 2 cut(s) 863, 1060
FokI GGATG 2 cut(s) 183, 1274
Fsp4HI GCNGC 2 cut(s) 863, 1060
FspBI CTAG 2 cut(s) 102, 341
GluI GCNGC 2 cut(s) 863, 1060
HapII CCGG 1 cut(s) 868
Hin1II CATG 8 cut(s) 18, 448, 547, 1059, 1157, 1178, 1221, 1288
HincII GTYRAC 1 cut(s) 1377
HindII GTYRAC 1 cut(s) 1377
HindIII AAGCTT 1 cut(s) 436
HinfI GANTC 8 cut(s) 207, 214, 255, 307, 477, 566, 902, 1245
HpaII CCGG 1 cut(s) 868
HphI GGTGA 1 cut(s) 1310
Hpy166II GTNNAC 3 cut(s) 283, 1171, 1377
Hpy188I TCNGA 5 cut(s) 170, 193, 721, 1107, 1250
Hpy188III TCNNGA 8 cut(s) 211, 557, 638, 770, 986, 1090, 1225, 1306
Hpy8I GTNNAC 3 cut(s) 283, 1171, 1377
Hpy99I CGWCG 1 cut(s) 635
HpyAV CCTTC 4 cut(s) 174, 495, 926, 1130
HpyCH4III ACNGT 2 cut(s) 403, 515
HpyCH4IV ACGT 7 cut(s) 115, 232, 300, 414, 716, 1016, 1379
HpyCH4V TGCA 7 cut(s) 450, 624, 734, 865, 919, 997, 1236
HpyF10VI GCNNNNNNNGC 1 cut(s) 1397
HpyF3I CTNAG 2 cut(s) 241, 473
HpySE526I ACGT 7 cut(s) 115, 232, 300, 414, 716, 1016, 1379
Hsp92II CATG 8 cut(s) 18, 448, 547, 1059, 1157, 1178, 1221, 1288
KpnI GGTACC 1 cut(s) 1202
Kzo9I GATC 9 cut(s) 163, 349, 382, 634, 781, 804, 910, 952, 982
LmnI GCTCC 4 cut(s) 242, 766, 973, 1039
Lsp1109I GCAGC 2 cut(s) 849, 1046
LweI GCATC 1 cut(s) 1006
MaeI CTAG 2 cut(s) 102, 341
MaeII ACGT 7 cut(s) 115, 232, 300, 414, 716, 1016, 1379
MaeIII GTNAC 4 cut(s) 323, 690, 1127, 1160
MalI GATC 9 cut(s) 165, 351, 384, 636, 783, 806, 912, 954, 984
MbiI CCGCTC 1 cut(s) 1259
MboI GATC 9 cut(s) 163, 349, 382, 634, 781, 804, 910, 952, 982
MboII GAAGA 5 cut(s) 136, 189, 617, 856, 1040
MflI RGATCY 3 cut(s) 382, 952, 982
MluCI AATT 6 cut(s) 51, 187, 196, 1021, 1407, 1412
MlyI GAGTC 2 cut(s) 471, 560
MmeI TCCRAC 1 cut(s) 505
MnlI CCTC 8 cut(s) 79, 196, 265, 513, 651, 738, 1232, 1244
Mph1103I ATGCAT 1 cut(s) 999
MseI TTAA 6 cut(s) 8, 186, 750, 833, 948, 1020
MslI CAYNNNNRTG 3 cut(s) 118, 458, 1158
MspA1I CMGCKG 1 cut(s) 862
MspCI CTTAAG 1 cut(s) 832
MspI CCGG 1 cut(s) 868
MspR9I CCNGG 1 cut(s) 1367
MvaI CCWGG 1 cut(s) 1367
MwoI GCNNNNNNNGC 1 cut(s) 1397
NcoI CCATGG 1 cut(s) 1153
NdeII GATC 9 cut(s) 163, 349, 382, 634, 781, 804, 910, 952, 982
NlaIII CATG 8 cut(s) 18, 448, 547, 1059, 1157, 1178, 1221, 1288
NlaIV GGNNCC 3 cut(s) 238, 984, 1200
NmuCI GTSAC 2 cut(s) 323, 1160
NsiI ATGCAT 1 cut(s) 999
NspI RCATGY 4 cut(s) 18, 448, 1059, 1288
NspV TTCGAA 1 cut(s) 1417
OliI CACNNNNGTG 1 cut(s) 458
PciI ACATGT 2 cut(s) 444, 1284
PfeI GAWTC 6 cut(s) 207, 214, 255, 307, 902, 1245
PflFI GACNNNGTC 1 cut(s) 403
PflMI CCANNNNNTGG 2 cut(s) 379, 977
PinAI ACCGGT 1 cut(s) 867
PkrI GCNGC 2 cut(s) 864, 1061
PleI GAGTC 2 cut(s) 471, 560
PmaCI CACGTG 1 cut(s) 233
PmlI CACGTG 1 cut(s) 233
PpsI GAGTC 2 cut(s) 471, 560
Ppu21I YACGTR 3 cut(s) 116, 233, 415
PscI ACATGT 2 cut(s) 444, 1284
PshBI ATTAAT 1 cut(s) 186
PsiI TTATAA 2 cut(s) 80, 141
Psp1406I AACGTT 1 cut(s) 1379
Psp6I CCWGG 1 cut(s) 1365
PspCI CACGTG 1 cut(s) 233
PspGI CCWGG 1 cut(s) 1365
PspN4I GGNNCC 3 cut(s) 238, 984, 1200
PsuI RGATCY 3 cut(s) 382, 952, 982
PsyI GACNNNGTC 1 cut(s) 403
PvuII CAGCTG 1 cut(s) 862
RsaI GTAC 9 cut(s) 222, 345, 443, 600, 707, 715, 1170, 1200, 1283
RsaNI GTAC 9 cut(s) 221, 344, 442, 599, 706, 714, 1169, 1199, 1282
RseI CAYNNNNRTG 3 cut(s) 118, 458, 1158
SaqAI TTAA 6 cut(s) 8, 186, 750, 833, 948, 1020
SatI GCNGC 2 cut(s) 863, 1060
Sau3AI GATC 9 cut(s) 163, 349, 382, 634, 781, 804, 910, 952, 982
ScaI AGTACT 1 cut(s) 345
SchI GAGTC 2 cut(s) 471, 560
ScrFI CCNGG 1 cut(s) 1367
SfaNI GCATC 1 cut(s) 1006
SfuI TTCGAA 1 cut(s) 1417
SmiMI CAYNNNNRTG 3 cut(s) 118, 458, 1158
SmlI CTYRAG 4 cut(s) 527, 832, 1088, 1223
SmoI CTYRAG 4 cut(s) 527, 832, 1088, 1223
SpeI ACTAGT 1 cut(s) 340
Sse9I AATT 6 cut(s) 51, 187, 196, 1021, 1407, 1412
SsiI CCGC 4 cut(s) 672, 1033, 1187, 1259
SspI AATATT 3 cut(s) 151, 744, 1323
SspMI CTAG 2 cut(s) 102, 341
StyD4I CCNGG 1 cut(s) 1365
StyI CCWWGG 4 cut(s) 709, 1153, 1190, 1385
TaaI ACNGT 2 cut(s) 403, 515
TaiI ACGT 7 cut(s) 118, 235, 303, 417, 719, 1019, 1382
TaqI TCGA 4 cut(s) 549, 633, 771, 1417
TasI AATT 6 cut(s) 51, 187, 196, 1021, 1407, 1412
TatI WGTACW 6 cut(s) 220, 343, 441, 598, 1168, 1281
TfiI GAWTC 6 cut(s) 207, 214, 255, 307, 902, 1245
Tru1I TTAA 6 cut(s) 8, 186, 750, 833, 948, 1020
Tru9I TTAA 6 cut(s) 8, 186, 750, 833, 948, 1020
TscAI CASTG 2 cut(s) 319, 681
TseFI GTSAC 2 cut(s) 323, 1160
TseI GCWGC 2 cut(s) 862, 1059
Tsp45I GTSAC 2 cut(s) 323, 1160
TspDTI ATGAA 6 cut(s) 60, 63, 239, 1040, 1278, 1370
TspGWI ACGGA 1 cut(s) 495
TspRI CASTG 2 cut(s) 319, 681
Tth111I GACNNNGTC 1 cut(s) 403
Van91I CCANNNNNTGG 2 cut(s) 379, 977
Vha464I CTTAAG 1 cut(s) 832
VspI ATTAAT 1 cut(s) 186
XapI RAATTY 1 cut(s) 1412
XceI RCATGY 4 cut(s) 18, 448, 1059, 1288
XspI CTAG 2 cut(s) 102, 341
ZrmI AGTACT 1 cut(s) 345
Zsp2I ATGCAT 1 cut(s) 999
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.