pycom03g19340

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
OG0000079
Physical Location & Seq
Forward (+)
19950344 .. 19951330
987 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g19340.1

Sequence Viewer

Length: 987 bp
ATGGGTTCAAACTCGAAGTTTCGTAAAGCATGCATTGAAGATAGGATCAGTGGATTGCCAGATGCAATTCTTTCCCGCATTCTTTCTTCCGTTTCAACAAGAGATGCTTTAAAAACCAGCGTTTTGTCACACAGATGGTTCAATGTGTGGGCTTCTGTTCCCAATCTAAGACTAACTCAGACTTCTCCGAAAGAATTTTCCCGTTTCGCGGGGTATGTGGACCAGGTACTTTTCTTTCGCGGCTCATCAAAAATTCATGCATTCAAGCTTCGTTGTAAGGTACCGAACGACGATTTTTCTAGGATTGATTCTAGGATTTGCACTGCTGTTAGGCGTAATGTTGCTGAGCTCGAACTTGATCTCTTCGTAGACTTGACGCCAAATACATATCAGGGTTATCAGTTGCCAAGAAGGCTTTTGATGTGCAACACTTTGGTGGTTTTAAAGCTGACTTTGCATTGTAACGATATTACCGTTACTCCTAGCTCAGGCTGTTTTCCAAGTCTCAAGTTTCTCCATGCTACTGTGCATTATCCTGTTGGTGACTTGATGGAGAAGCTTTTTTCTTGTTGCCCTGTACTTGAAGATTTGATTATCAATGGAGATCTTGAAGAAGATTCAATTTTGAATTTTAATGTCTCTGCACCTAATCTAAAACGACTACGAATTAGTTTGCACATTGATCCATTCCCTTTTGATGGAGATGATATTTACAGAATGGGAGATTATAACTACAAGATTCTTGTTAATGTTAATGCTCCAAACCTTGAAGAGTTCAACCTCCTCGAGAACTTTCTGGCAAGCTATTCCTTTAACCATGCAAATTTGCTAAGCAAAGCGAAGATTGATTTGGGAGACATGCATGTGTTCAACAACCTTGACTTTGTGCACAAGTCTGCTGATCGTATTTATAGTGTTTTTGCAGCAATTATCAATGTTACACATATATCACTTTCAGCTCCAGCTTTTGGGGTAAGTATGCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

329

Amino Acids

37.08

Weight (kDa)

7.13

Isoelectric Point (pI)

42.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 16 - 56 4.6e-06 F-box domain
LRR_At5g56370 PF24758 110 - 268 2e-09 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 729
Acc65I GGTACC 1 cut(s) 280
AccB1I GGYRCC 1 cut(s) 280
AccB7I CCANNNNNTGG 1 cut(s) 968
AccI GTMKAC 1 cut(s) 369
AccII CGCG 2 cut(s) 209, 240
AciI CCGC 3 cut(s) 76, 209, 240
AclWI GGATC 2 cut(s) 53, 677
AcsI RAATTY 4 cut(s) 194, 252, 628, 823
AcyI GRCGYC 1 cut(s) 377
AfaI GTAC 3 cut(s) 228, 282, 579
AfiI CCNNNNNNNGG 4 cut(s) 208, 488, 698, 968
AjnI CCWGG 1 cut(s) 222
AjuI GAANNNNNNNTTGG 2 cut(s) 833, 865
AleI CACNNNNGTG 1 cut(s) 434
AluBI AGCT 8 cut(s) 268, 349, 448, 486, 559, 804, 959, 965
AluI AGCT 8 cut(s) 268, 349, 448, 486, 559, 804, 959, 965
Alw21I GWGCWC 2 cut(s) 351, 891
Alw26I GTCTC 3 cut(s) 509, 643, 849
Alw44I GTGCAC 1 cut(s) 887
AlwI GGATC 2 cut(s) 53, 677
Ama87I CYCGRG 1 cut(s) 785
ApaLI GTGCAC 1 cut(s) 887
ApeKI GCWGC 1 cut(s) 923
ApoI RAATTY 4 cut(s) 194, 252, 628, 823
Asp718I GGTACC 1 cut(s) 280
AspS9I GGNCC 1 cut(s) 220
AsuHPI GGTGA 1 cut(s) 554
AvaI CYCGRG 1 cut(s) 785
AvaII GGWCC 1 cut(s) 220
BaeGI GKGCMC 1 cut(s) 891
BanI GGYRCC 1 cut(s) 280
BanII GRGCYC 1 cut(s) 351
Bbv12I GWGCWC 2 cut(s) 351, 891
BbvI GCAGC 1 cut(s) 935
BccI CCATC 3 cut(s) 129, 544, 692
BciT130I CCWGG 1 cut(s) 224
BcoDI GTCTC 3 cut(s) 509, 643, 849
BfaI CTAG 3 cut(s) 300, 312, 483
BglI GCCNNNNNGGC 1 cut(s) 412
BglII AGATCT 1 cut(s) 604
BisI GCNGC 2 cut(s) 241, 924
BlpI GCTNAGC 2 cut(s) 345, 830
BlsI GCNGC 2 cut(s) 242, 925
Bme1390I CCNGG 1 cut(s) 224
Bme18I GGWCC 1 cut(s) 220
BmeT110I CYCGRG 1 cut(s) 785
BmgT120I GGNCC 1 cut(s) 220
BmiI GGNNCC 1 cut(s) 282
BmrFI CCNGG 1 cut(s) 224
BmsI GCATC 2 cut(s) 52, 94
BpmI CTGGAG 1 cut(s) 945
Bpu10I CCTNAGC 1 cut(s) 487
Bpu1102I GCTNAGC 2 cut(s) 345, 830
BpuEI CTTGAG 1 cut(s) 491
BsaHI GRCGYC 1 cut(s) 377
BsaXI ACNNNNNCTCC 2 cut(s) 463, 493
Bsc4I CCNNNNNNNGG 4 cut(s) 208, 488, 698, 968
BseBI CCWGG 1 cut(s) 224
BseLI CCNNNNNNNGG 4 cut(s) 208, 488, 698, 968
BseMII CTCAG 3 cut(s) 191, 336, 501
BseRI GAGGAG 1 cut(s) 773
BseSI GKGCMC 1 cut(s) 891
BseXI GCAGC 1 cut(s) 935
BsgI GTGCAG 1 cut(s) 627
Bsh1236I CGCG 2 cut(s) 209, 240
BshNI GGYRCC 1 cut(s) 280
BsiHKAI GWGCWC 2 cut(s) 351, 891
BsiHKCI CYCGRG 1 cut(s) 785
BslI CCNNNNNNNGG 4 cut(s) 208, 488, 698, 968
BsmAI GTCTC 3 cut(s) 509, 643, 849
BsmI GAATGC 2 cut(s) 78, 260
BsoBI CYCGRG 1 cut(s) 785
Bsp1286I GDGCHC 2 cut(s) 351, 891
Bsp143I GATC 5 cut(s) 45, 358, 604, 682, 901
Bsp1720I GCTNAGC 2 cut(s) 345, 830
BspACI CCGC 3 cut(s) 76, 209, 240
BspCNI CTCAG 3 cut(s) 190, 337, 500
BspFNI CGCG 2 cut(s) 209, 240
BspLI GGNNCC 1 cut(s) 282
BspPI GGATC 2 cut(s) 53, 677
BspT107I GGYRCC 1 cut(s) 280
BssMI GATC 5 cut(s) 45, 358, 604, 682, 901
BssNI GRCGYC 1 cut(s) 377
Bst2UI CCWGG 1 cut(s) 224
Bst4CI ACNGT 2 cut(s) 475, 526
Bst6I CTCTTC 2 cut(s) 368, 765
BstACI GRCGYC 1 cut(s) 377
BstC8I GCNNGC 2 cut(s) 31, 802
BstDEI CTNAG 5 cut(s) 167, 177, 345, 487, 830
BstENI CCTNNNNNAGG 1 cut(s) 486
BstFNI CGCG 2 cut(s) 209, 240
BstKTI GATC 5 cut(s) 48, 361, 607, 685, 904
BstMAI GTCTC 3 cut(s) 509, 643, 849
BstMBI GATC 5 cut(s) 45, 358, 604, 682, 901
BstMWI GCNNNNNNNGC 2 cut(s) 412, 454
BstNI CCWGG 1 cut(s) 224
BstNSI RCATGY 3 cut(s) 33, 862, 866
BstSCI CCNGG 1 cut(s) 222
BstSLI GKGCMC 1 cut(s) 891
BstUI CGCG 2 cut(s) 209, 240
BstV1I GCAGC 1 cut(s) 935
BstX2I RGATCY 1 cut(s) 604
BstYI RGATCY 1 cut(s) 604
BtsI GCAGTG 1 cut(s) 321
BtsIMutI CAGTG 2 cut(s) 55, 321
Cac8I GCNNGC 2 cut(s) 31, 802
Cfr13I GGNCC 1 cut(s) 220
CseI GACGC 1 cut(s) 385
CsiI ACCWGGT 1 cut(s) 222
Csp6I GTAC 3 cut(s) 227, 281, 578
CviAII CATG 6 cut(s) 30, 257, 518, 818, 859, 863
CviQI GTAC 3 cut(s) 227, 281, 578
DdeI CTNAG 5 cut(s) 167, 177, 345, 487, 830
DpnI GATC 5 cut(s) 47, 360, 606, 684, 903
DpnII GATC 5 cut(s) 45, 358, 604, 682, 901
DraI TTTAAA 2 cut(s) 111, 444
Eam1104I CTCTTC 2 cut(s) 368, 765
EarI CTCTTC 2 cut(s) 368, 765
Ecl136II GAGCTC 1 cut(s) 349
Eco24I GRGCYC 1 cut(s) 351
Eco47I GGWCC 1 cut(s) 220
Eco53kI GAGCTC 1 cut(s) 349
Eco88I CYCGRG 1 cut(s) 785
EcoICRI GAGCTC 1 cut(s) 349
EcoNI CCTNNNNNAGG 1 cut(s) 486
EcoRII CCWGG 1 cut(s) 222
EcoT22I ATGCAT 3 cut(s) 35, 262, 864
EcoT38I GRGCYC 1 cut(s) 351
FaeI CATG 6 cut(s) 33, 260, 521, 821, 862, 866
FalI AAGNNNNNCTT 2 cut(s) 91, 123
FatI CATG 6 cut(s) 29, 256, 517, 817, 858, 862
FauI CCCGC 2 cut(s) 83, 202
FblI GTMKAC 1 cut(s) 369
Fnu4HI GCNGC 2 cut(s) 241, 924
FriOI GRGCYC 1 cut(s) 351
Fsp4HI GCNGC 2 cut(s) 241, 924
FspBI CTAG 3 cut(s) 300, 312, 483
GluI GCNGC 2 cut(s) 241, 924
GsuI CTGGAG 1 cut(s) 945
HgaI GACGC 1 cut(s) 385
Hin1I GRCGYC 1 cut(s) 377
Hin1II CATG 6 cut(s) 33, 260, 521, 821, 862, 866
HindIII AAGCTT 2 cut(s) 266, 557
HinfI GANTC 3 cut(s) 308, 617, 739
HphI GGTGA 1 cut(s) 554
Hpy166II GTNNAC 3 cut(s) 220, 370, 889
Hpy188I TCNGA 2 cut(s) 180, 189
Hpy188III TCNNGA 2 cut(s) 608, 787
Hpy8I GTNNAC 3 cut(s) 220, 370, 889
Hpy99I CGWCG 1 cut(s) 293
HpyAV CCTTC 1 cut(s) 405
HpyCH4III ACNGT 2 cut(s) 475, 526
HpyF10VI GCNNNNNNNGC 2 cut(s) 412, 454
HpyF3I CTNAG 5 cut(s) 167, 177, 345, 487, 830
Hsp92I GRCGYC 1 cut(s) 377
Hsp92II CATG 6 cut(s) 33, 260, 521, 821, 862, 866
KpnI GGTACC 1 cut(s) 284
Kzo9I GATC 5 cut(s) 45, 358, 604, 682, 901
LmnI GCTCC 2 cut(s) 763, 964
Lsp1109I GCAGC 1 cut(s) 935
LweI GCATC 2 cut(s) 52, 94
MabI ACCWGGT 1 cut(s) 222
MaeI CTAG 3 cut(s) 300, 312, 483
MaeIII GTNAC 5 cut(s) 126, 461, 475, 542, 937
MalI GATC 5 cut(s) 47, 360, 606, 684, 903
MboI GATC 5 cut(s) 45, 358, 604, 682, 901
MboII GAAGA 8 cut(s) 50, 78, 355, 596, 623, 626, 782, 853
MflI RGATCY 1 cut(s) 604
MhlI GDGCHC 2 cut(s) 351, 891
MluCI AATT 8 cut(s) 66, 194, 252, 621, 628, 666, 823, 927
MnlI CCTC 2 cut(s) 791, 794
Mph1103I ATGCAT 3 cut(s) 35, 262, 864
MseI TTAA 6 cut(s) 110, 443, 633, 747, 753, 813
MslI CAYNNNNRTG 3 cut(s) 133, 434, 863
MspR9I CCNGG 1 cut(s) 224
Mva1269I GAATGC 2 cut(s) 78, 260
MvaI CCWGG 1 cut(s) 224
MvnI CGCG 2 cut(s) 209, 240
MwoI GCNNNNNNNGC 2 cut(s) 412, 454
NdeII GATC 5 cut(s) 45, 358, 604, 682, 901
NlaIII CATG 6 cut(s) 33, 260, 521, 821, 862, 866
NlaIV GGNNCC 1 cut(s) 282
NmuCI GTSAC 2 cut(s) 126, 542
NsiI ATGCAT 3 cut(s) 35, 262, 864
NspI RCATGY 3 cut(s) 33, 862, 866
OliI CACNNNNGTG 1 cut(s) 434
PaeI GCATGC 1 cut(s) 33
PaeR7I CTCGAG 1 cut(s) 785
PcsI WCGNNNNNNNCGW 1 cut(s) 471
PctI GAATGC 2 cut(s) 78, 260
PfeI GAWTC 3 cut(s) 308, 617, 739
PflMI CCANNNNNTGG 1 cut(s) 968
PkrI GCNGC 2 cut(s) 242, 925
PsiI TTATAA 1 cut(s) 729
Psp124BI GAGCTC 1 cut(s) 351
Psp6I CCWGG 1 cut(s) 222
PspGI CCWGG 1 cut(s) 222
PspN4I GGNNCC 1 cut(s) 282
PspPI GGNCC 1 cut(s) 220
PsuI RGATCY 1 cut(s) 604
RsaI GTAC 3 cut(s) 228, 282, 579
RsaNI GTAC 3 cut(s) 227, 281, 578
RseI CAYNNNNRTG 3 cut(s) 133, 434, 863
SacI GAGCTC 1 cut(s) 351
SaqAI TTAA 6 cut(s) 110, 443, 633, 747, 753, 813
SatI GCNGC 2 cut(s) 241, 924
Sau3AI GATC 5 cut(s) 45, 358, 604, 682, 901
Sau96I GGNCC 1 cut(s) 220
ScrFI CCNGG 1 cut(s) 224
SduI GDGCHC 2 cut(s) 351, 891
SexAI ACCWGGT 1 cut(s) 222
SfaNI GCATC 2 cut(s) 52, 94
Sfr274I CTCGAG 1 cut(s) 785
SinI GGWCC 1 cut(s) 220
SlaI CTCGAG 1 cut(s) 785
SmiMI CAYNNNNRTG 3 cut(s) 133, 434, 863
SmlI CTYRAG 2 cut(s) 506, 785
SmoI CTYRAG 2 cut(s) 506, 785
SphI GCATGC 1 cut(s) 33
Sse9I AATT 8 cut(s) 66, 194, 252, 621, 628, 666, 823, 927
SsiI CCGC 3 cut(s) 76, 209, 240
SspMI CTAG 3 cut(s) 300, 312, 483
SstI GAGCTC 1 cut(s) 351
StyD4I CCNGG 1 cut(s) 222
TaaI ACNGT 2 cut(s) 475, 526
TaqI TCGA 3 cut(s) 14, 351, 786
TasI AATT 8 cut(s) 66, 194, 252, 621, 628, 666, 823, 927
TatI WGTACW 1 cut(s) 577
TauI GCSGC 1 cut(s) 243
TfiI GAWTC 3 cut(s) 308, 617, 739
Tru1I TTAA 6 cut(s) 110, 443, 633, 747, 753, 813
Tru9I TTAA 6 cut(s) 110, 443, 633, 747, 753, 813
TscAI CASTG 2 cut(s) 55, 328
TseFI GTSAC 2 cut(s) 126, 542
TseI GCWGC 1 cut(s) 923
Tsp45I GTSAC 2 cut(s) 126, 542
TspDTI ATGAA 1 cut(s) 245
TspGWI ACGGA 1 cut(s) 79
TspRI CASTG 2 cut(s) 55, 328
Van91I CCANNNNNTGG 1 cut(s) 968
VneI GTGCAC 1 cut(s) 887
VpaK11BI GGWCC 1 cut(s) 220
XagI CCTNNNNNAGG 1 cut(s) 486
XapI RAATTY 4 cut(s) 194, 252, 628, 823
XceI RCATGY 3 cut(s) 33, 862, 866
XhoI CTCGAG 1 cut(s) 785
XmiI GTMKAC 1 cut(s) 369
XspI CTAG 3 cut(s) 300, 312, 483
Zsp2I ATGCAT 3 cut(s) 35, 262, 864
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.