Rh4DG012700

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0000079
Physical Location & Seq
Reverse (-)
2032775 .. 2034265
1491 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG012700.1

Sequence Viewer

Length: 1491 bp
ATGAAGGACAGTGGAGATCTCAAACGTGCACTGCACGATTCAAAATCACAACTCCAACCTGCGGAAGGTATTGGAGATGACAGGATCAGTGCGTTACCGGATGAGATTCTCTGTCATATACTCTCTCTCCTCATCCCGTTATATTCTGTCCGGACCACCGTCTTGTCTAAGAGGTGGAACAACTTGTGGACTAGTTGTATTACCAACCTTGATTTCGACATGTATGATTTCCGTTCATCATGGTATAACTATCGCATTTTCGTCAGGTTCGTTAATCGGGTGTTGGCCTTACGCGACTCATCGTTAGACATCAGAAGATTTCGTGTTGATTGGGTCGATTGTGAAGATTTCTCTATTATTGATCGTTGGATACGTGCCGCCATCAAGGCTAATGTTGTTGAGCTTGATGTTTCTTTTTCTGTGGAATGTTGTGGTGAACCTTACTTGGTGCGTCCTTTCGAAATGCCTCGAAGTGTTTTTACCAGCAAATCACTGGTGGCTTTGAAGGTGAAGTCAGATTATCTTACCTATTCTCTTCCTACAACAGGTTGTTATTTCCCAAATCTCAAGTTCCTTCATTTTTCTTCTTGGTATAATTCCGATTCGGCCTCAGAGGAAAATCTTTTCCGTAGCTGCCCTGTACTCGAAGAGTTGACTATAGAAGGACGTCATAAGGAAGATGTTTTGAATTTCAACATATCTGCACCTGAATTGCGGACACTAACGACCATCATTTCAGAAGCAAGGCATGATGAAGAATTTGATGAATCGGATGAAGATTCTGGCGGAGAAGGTTCTGGAGAATATAGGGTAGAACCCTGCAATTTCTTTATCGATGCCCCGAAACTTGAAAACTTTTGTGTTGCGGGAGAGGTTATGTCAAAGTATATTTTGGAGAACTCTAGCTCCTTAGTTCAAGCCAAAGTTCAACTCCAAGAGTTCCATGAAGCTTGCGCTGACCGTGTTGCTGAGTTCTTGGATAGAATTTCAAGCGTCAGATATATGGTCCTTTCAGCTCCTGATTTTAAGCCTTGTTTGCCTCATGTTTTTAGTAATTTGATCAAGCTAGAGCTGGTTTTTTACAATCAGTCTTGCTGGAAATGGCTTGCCGACGTGCTCAACATATCGCCTAATCTAGAATATCTTGTCTTAGACTTTGCAAAAATCAAATCAGGAGGACGAGATTCATTGCCTGATTTGGAATCTTTTGGCGATGACTTTGCAAGCATCAACATGAGAGAAGGATGGGATTCCTTCCATCCACCAGAGTTTTTGCCTAGTTGTTTGTCTTCACAGCTCAAGACTATCTCCATAAAGGGATTCAAAGGAACACCGAATGAGATTGGCGTGGCAGTGTATTTGTTAATCTATGGTGAAGTTCTAAATAAGGTGATTGTTTCTTGTGAGAGTTGTTCCAGCATTCGCGGTGCAAAGGAGAAGATTTTATCCTTTGTAAAGGGTTCAAAGACATGTCAAGTTAGTTTTATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

496

Amino Acids

56.49

Weight (kDa)

5.04

Isoelectric Point (pI)

50.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 29 - 66 2.7e-06 F-box domain
LRR_At5g56370 PF24758 120 - 246 7.2e-09 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 422 - 465 1e-08 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 670
Acc36I ACCTGC 1 cut(s) 67
AccII CGCG 2 cut(s) 294, 1425
AccIII TCCGGA 1 cut(s) 150
AciI CCGC 6 cut(s) 62, 378, 715, 786, 866, 1425
AclWI GGATC 1 cut(s) 92
AcsI RAATTY 3 cut(s) 688, 758, 984
AcyI GRCGYC 1 cut(s) 667
AfaI GTAC 1 cut(s) 642
AfiI CCNNNNNNNGG 3 cut(s) 61, 65, 545
AflIII ACRYGT 2 cut(s) 219, 1469
AhlI ACTAGT 1 cut(s) 191
AjiI CACGTC 1 cut(s) 1114
AjuI GAANNNNNNNTTGG 2 cut(s) 197, 229
AloI GAACNNNNNNTCC 2 cut(s) 890, 922
AluBI AGCT 8 cut(s) 403, 633, 906, 950, 1016, 1066, 1072, 1297
AluI AGCT 8 cut(s) 403, 633, 906, 950, 1016, 1066, 1072, 1297
Alw21I GWGCWC 2 cut(s) 31, 1119
Alw44I GTGCAC 1 cut(s) 27
AlwI GGATC 1 cut(s) 92
AlwNI CAGNNNCTG 1 cut(s) 1019
Aor13HI TCCGGA 1 cut(s) 150
AoxI GGCC 2 cut(s) 285, 606
ApaLI GTGCAC 1 cut(s) 27
ApeKI GCWGC 1 cut(s) 633
ApoI RAATTY 3 cut(s) 688, 758, 984
AspLEI GCGC 1 cut(s) 956
AspS9I GGNCC 2 cut(s) 153, 1006
AsuHPI GGTGA 4 cut(s) 446, 520, 1385, 1402
AsuII TTCGAA 1 cut(s) 459
AvaII GGWCC 2 cut(s) 153, 1006
BaeGI GKGCMC 1 cut(s) 31
BarI GAAGNNNNNNTAC 2 cut(s) 463, 495
BbsI GAAGAC 1 cut(s) 1281
Bbv12I GWGCWC 2 cut(s) 31, 1119
BbvI GCAGC 1 cut(s) 620
BccI CCATC 4 cut(s) 389, 737, 1239, 1266
BcgI CGANNNNNNTGC 2 cut(s) 1202, 1236
BciVI GTATCC 1 cut(s) 363
BclI TGATCA 1 cut(s) 1059
BcuI ACTAGT 1 cut(s) 191
BfaI CTAG 5 cut(s) 192, 903, 1067, 1136, 1278
BfmI CTRYAG 1 cut(s) 657
BfuAI ACCTGC 1 cut(s) 67
BfuI GTATCC 1 cut(s) 363
BglI GCCNNNNNGGC 1 cut(s) 386
BglII AGATCT 1 cut(s) 16
BisI GCNGC 2 cut(s) 378, 634
BlsI GCNGC 2 cut(s) 379, 635
Bme18I GGWCC 2 cut(s) 153, 1006
BmgBI CACGTC 1 cut(s) 1114
BmgT120I GGNCC 2 cut(s) 153, 1006
BmsI GCATC 2 cut(s) 826, 1236
BoxI GACNNNNGTC 1 cut(s) 158
BpiI GAAGAC 1 cut(s) 1281
BpmI CTGGAG 1 cut(s) 819
Bpu14I TTCGAA 1 cut(s) 459
BpuEI CTTGAG 2 cut(s) 551, 1283
Bsa29I ATCGAT 1 cut(s) 834
BsaAI YACGTR 1 cut(s) 374
BsaHI GRCGYC 1 cut(s) 667
BsaWI WCCGGW 2 cut(s) 97, 150
BsaXI ACNNNNNCTCC 4 cut(s) 111, 141, 890, 920
Bsc4I CCNNNNNNNGG 3 cut(s) 61, 65, 545
Bse1I ACTGG 1 cut(s) 498
Bse3DI GCAATG 1 cut(s) 1187
BseAI TCCGGA 1 cut(s) 150
BseCI ATCGAT 1 cut(s) 834
BseGI GGATG 5 cut(s) 106, 132, 778, 1250, 1258
BseLI CCNNNNNNNGG 3 cut(s) 61, 65, 545
BseMI GCAATG 1 cut(s) 1187
BseMII CTCAG 2 cut(s) 624, 960
BseNI ACTGG 1 cut(s) 498
BseRI GAGGAG 1 cut(s) 119
BseSI GKGCMC 1 cut(s) 31
BseXI GCAGC 1 cut(s) 620
BsgI GTGCAG 2 cut(s) 17, 687
Bsh1236I CGCG 2 cut(s) 294, 1425
BshFI GGCC 2 cut(s) 287, 608
BshVI ATCGAT 1 cut(s) 834
BsiHKAI GWGCWC 2 cut(s) 31, 1119
BsiSI CCGG 2 cut(s) 98, 151
BslI CCNNNNNNNGG 3 cut(s) 61, 65, 545
BsmI GAATGC 1 cut(s) 1419
BsnI GGCC 2 cut(s) 287, 608
Bsp119I TTCGAA 1 cut(s) 459
Bsp1286I GDGCHC 2 cut(s) 31, 1119
Bsp13I TCCGGA 1 cut(s) 150
Bsp143I GATC 4 cut(s) 16, 84, 361, 1059
BspACI CCGC 6 cut(s) 62, 378, 715, 786, 866, 1425
BspANI GGCC 2 cut(s) 287, 608
BspCNI CTCAG 2 cut(s) 623, 961
BspDI ATCGAT 1 cut(s) 834
BspEI TCCGGA 1 cut(s) 150
BspFNI CGCG 2 cut(s) 294, 1425
BspMI ACCTGC 1 cut(s) 67
BspPI GGATC 1 cut(s) 92
BspT104I TTCGAA 1 cut(s) 459
BsrDI GCAATG 1 cut(s) 1187
BsrI ACTGG 1 cut(s) 498
BssMI GATC 4 cut(s) 16, 84, 361, 1059
BssNI GRCGYC 1 cut(s) 667
Bst4CI ACNGT 3 cut(s) 11, 160, 962
Bst6I CTCTTC 2 cut(s) 540, 642
BstACI GRCGYC 1 cut(s) 667
BstBAI YACGTR 1 cut(s) 374
BstBI TTCGAA 1 cut(s) 459
BstC8I GCNNGC 3 cut(s) 952, 1107, 1225
BstDEI CTNAG 5 cut(s) 168, 610, 910, 969, 1150
BstENI CCTNNNNNAGG 2 cut(s) 63, 543
BstF5I GGATG 5 cut(s) 106, 132, 778, 1250, 1258
BstFNI CGCG 2 cut(s) 294, 1425
BstHHI GCGC 1 cut(s) 956
BstKTI GATC 4 cut(s) 19, 87, 364, 1062
BstMBI GATC 4 cut(s) 16, 84, 361, 1059
BstMWI GCNNNNNNNGC 2 cut(s) 386, 1036
BstNSI RCATGY 2 cut(s) 223, 1473
BstPAI GACNNNNGTC 1 cut(s) 158
BstSFI CTRYAG 1 cut(s) 657
BstSLI GKGCMC 1 cut(s) 31
BstUI CGCG 2 cut(s) 294, 1425
BstV1I GCAGC 1 cut(s) 620
BstV2I GAAGAC 1 cut(s) 1281
BstX2I RGATCY 1 cut(s) 16
BstYI RGATCY 1 cut(s) 16
Bsu15I ATCGAT 1 cut(s) 834
BsuI GTATCC 1 cut(s) 363
BsuRI GGCC 2 cut(s) 287, 608
BsuTUI ATCGAT 1 cut(s) 834
BtgZI GCGATG 1 cut(s) 1227
BtrI CACGTC 1 cut(s) 1114
BtsCI GGATG 5 cut(s) 106, 132, 778, 1250, 1258
BtsI GCAGTG 2 cut(s) 29, 1359
BtsIMutI CAGTG 5 cut(s) 16, 29, 94, 491, 1359
BveI ACCTGC 1 cut(s) 67
Cac8I GCNNGC 3 cut(s) 952, 1107, 1225
CaiI CAGNNNCTG 1 cut(s) 1019
CfoI GCGC 1 cut(s) 956
Cfr13I GGNCC 2 cut(s) 153, 1006
ClaI ATCGAT 1 cut(s) 834
CseI GACGC 2 cut(s) 440, 982
Csp6I GTAC 1 cut(s) 641
CviAII CATG 7 cut(s) 220, 240, 749, 944, 1043, 1234, 1470
CviQI GTAC 1 cut(s) 641
DdeI CTNAG 5 cut(s) 168, 610, 910, 969, 1150
DpnI GATC 4 cut(s) 18, 86, 363, 1061
DpnII GATC 4 cut(s) 16, 84, 361, 1059
Eam1104I CTCTTC 2 cut(s) 540, 642
EarI CTCTTC 2 cut(s) 540, 642
EciI GGCGGA 1 cut(s) 801
Eco47I GGWCC 2 cut(s) 153, 1006
EcoNI CCTNNNNNAGG 2 cut(s) 63, 543
FaeI CATG 7 cut(s) 223, 243, 752, 947, 1046, 1237, 1473
FatI CATG 7 cut(s) 219, 239, 748, 943, 1042, 1233, 1469
FauI CCCGC 1 cut(s) 859
FbaI TGATCA 1 cut(s) 1059
Fnu4HI GCNGC 2 cut(s) 378, 634
FokI GGATG 5 cut(s) 113, 119, 785, 1245, 1257
Fsp4HI GCNGC 2 cut(s) 378, 634
FspBI CTAG 5 cut(s) 192, 903, 1067, 1136, 1278
GlaI GCGC 1 cut(s) 955
GluI GCNGC 2 cut(s) 378, 634
GsuI CTGGAG 1 cut(s) 819
HaeIII GGCC 2 cut(s) 287, 608
HapII CCGG 2 cut(s) 98, 151
HgaI GACGC 2 cut(s) 440, 982
HhaI GCGC 1 cut(s) 956
Hin1I GRCGYC 1 cut(s) 667
Hin1II CATG 7 cut(s) 223, 243, 752, 947, 1046, 1237, 1473
Hin6I GCGC 1 cut(s) 954
HinP1I GCGC 1 cut(s) 954
HincII GTYRAC 1 cut(s) 654
HindII GTYRAC 1 cut(s) 654
HindIII AAGCTT 1 cut(s) 948
HpaII CCGG 2 cut(s) 98, 151
HphI GGTGA 4 cut(s) 446, 520, 1385, 1402
Hpy166II GTNNAC 4 cut(s) 29, 189, 437, 654
Hpy188I TCNGA 8 cut(s) 314, 517, 601, 613, 739, 772, 998, 1490
Hpy188III TCNNGA 6 cut(s) 151, 798, 1019, 1136, 1173, 1300
Hpy8I GTNNAC 4 cut(s) 29, 189, 437, 654
Hpy99I CGWCG 1 cut(s) 1115
HpyAV CCTTC 7 cut(s) 59, 499, 584, 656, 785, 1235, 1264
HpyCH4III ACNGT 3 cut(s) 11, 160, 962
HpyCH4IV ACGT 4 cut(s) 25, 373, 667, 1113
HpyCH4V TGCA 7 cut(s) 29, 34, 704, 822, 1160, 1223, 1430
HpyF10VI GCNNNNNNNGC 2 cut(s) 386, 1036
HpyF3I CTNAG 5 cut(s) 168, 610, 910, 969, 1150
HpySE526I ACGT 4 cut(s) 25, 373, 667, 1113
Hsp92I GRCGYC 1 cut(s) 667
Hsp92II CATG 7 cut(s) 223, 243, 752, 947, 1046, 1237, 1473
HspAI GCGC 1 cut(s) 954
Kpn2I TCCGGA 1 cut(s) 150
Ksp22I TGATCA 1 cut(s) 1059
Kzo9I GATC 4 cut(s) 16, 84, 361, 1059
LmnI GCTCC 2 cut(s) 911, 1021
Lsp1109I GCAGC 1 cut(s) 620
LweI GCATC 2 cut(s) 826, 1236
MaeI CTAG 5 cut(s) 192, 903, 1067, 1136, 1278
MaeII ACGT 4 cut(s) 25, 373, 667, 1113
MaeIII GTNAC 1 cut(s) 93
MalI GATC 4 cut(s) 18, 86, 363, 1061
MboI GATC 4 cut(s) 16, 84, 361, 1059
MflI RGATCY 1 cut(s) 16
MhlI GDGCHC 2 cut(s) 31, 1119
MluCI AATT 7 cut(s) 595, 688, 710, 758, 823, 984, 1054
MlyI GAGTC 1 cut(s) 290
MmeI TCCRAC 2 cut(s) 79, 347
MnlI CCTC 8 cut(s) 140, 165, 477, 607, 619, 865, 1050, 1169
MroI TCCGGA 1 cut(s) 150
MseI TTAA 3 cut(s) 273, 1026, 1364
MslI CAYNNNNRTG 1 cut(s) 1232
MspI CCGG 2 cut(s) 98, 151
Mva1269I GAATGC 1 cut(s) 1419
MvnI CGCG 2 cut(s) 294, 1425
MwoI GCNNNNNNNGC 2 cut(s) 386, 1036
NdeII GATC 4 cut(s) 16, 84, 361, 1059
NlaIII CATG 7 cut(s) 223, 243, 752, 947, 1046, 1237, 1473
NspI RCATGY 2 cut(s) 223, 1473
NspV TTCGAA 1 cut(s) 459
PciI ACATGT 2 cut(s) 219, 1469
PcsI WCGNNNNNNNCGW 2 cut(s) 267, 370
PctI GAATGC 1 cut(s) 1419
PfeI GAWTC 9 cut(s) 38, 106, 602, 767, 779, 1184, 1202, 1250, 1320
PkrI GCNGC 2 cut(s) 379, 635
PleI GAGTC 1 cut(s) 290
PpsI GAGTC 1 cut(s) 290
Ppu21I YACGTR 1 cut(s) 374
PscI ACATGT 2 cut(s) 219, 1469
PshAI GACNNNNGTC 1 cut(s) 158
PspPI GGNCC 2 cut(s) 153, 1006
PstNI CAGNNNCTG 1 cut(s) 1019
PsuI RGATCY 1 cut(s) 16
RsaI GTAC 1 cut(s) 642
RsaNI GTAC 1 cut(s) 641
RseI CAYNNNNRTG 1 cut(s) 1232
SaqAI TTAA 3 cut(s) 273, 1026, 1364
SatI GCNGC 2 cut(s) 378, 634
Sau3AI GATC 4 cut(s) 16, 84, 361, 1059
Sau96I GGNCC 2 cut(s) 153, 1006
SchI GAGTC 1 cut(s) 290
SduI GDGCHC 2 cut(s) 31, 1119
SfaNI GCATC 2 cut(s) 826, 1236
SfcI CTRYAG 1 cut(s) 657
SfuI TTCGAA 1 cut(s) 459
SinI GGWCC 2 cut(s) 153, 1006
SmiMI CAYNNNNRTG 1 cut(s) 1232
SmlI CTYRAG 2 cut(s) 566, 1298
SmoI CTYRAG 2 cut(s) 566, 1298
SpeI ACTAGT 1 cut(s) 191
Sse9I AATT 7 cut(s) 595, 688, 710, 758, 823, 984, 1054
SsiI CCGC 6 cut(s) 62, 378, 715, 786, 866, 1425
SspMI CTAG 5 cut(s) 192, 903, 1067, 1136, 1278
TaaI ACNGT 3 cut(s) 11, 160, 962
TaiI ACGT 4 cut(s) 28, 376, 670, 1116
TaqI TCGA 6 cut(s) 216, 336, 459, 469, 645, 834
TasI AATT 7 cut(s) 595, 688, 710, 758, 823, 984, 1054
TatI WGTACW 1 cut(s) 640
TauI GCSGC 1 cut(s) 380
TfiI GAWTC 9 cut(s) 38, 106, 602, 767, 779, 1184, 1202, 1250, 1320
Tru1I TTAA 3 cut(s) 273, 1026, 1364
Tru9I TTAA 3 cut(s) 273, 1026, 1364
TscAI CASTG 5 cut(s) 16, 36, 94, 498, 1359
TseI GCWGC 1 cut(s) 633
TspDTI ATGAA 8 cut(s) 17, 225, 566, 768, 780, 789, 960, 1176
TspGWI ACGGA 2 cut(s) 221, 617
TspRI CASTG 5 cut(s) 16, 36, 94, 498, 1359
VneI GTGCAC 1 cut(s) 27
VpaK11BI GGWCC 2 cut(s) 153, 1006
XagI CCTNNNNNAGG 2 cut(s) 63, 543
XapI RAATTY 3 cut(s) 688, 758, 984
XbaI TCTAGA 1 cut(s) 1135
XceI RCATGY 2 cut(s) 223, 1473
XcmI CCANNNNNNNNNTGG 1 cut(s) 490
XspI CTAG 5 cut(s) 192, 903, 1067, 1136, 1278
ZraI GACGTC 1 cut(s) 668
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.