Rorug05G0112900

sodium metabolite cotransporter BASS1

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
10066102 .. 10071015
4914 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0112900.1

Sequence Viewer

Length: 2187 bp
ATGGATCTCAGTTCGTTCCTGACGTCGTTAGGGACCTCGTTTGCTATATTTGTGATTCTGATGTTTCTGTTCGCGTGGCTTTCGAGAAAGCCCGGGAACGCGGTGGTGTACTATCCCAATCGGATCCTCAAGGGTTTGGATCCGTGGGAGGGCGGGTCCAAGACCCGGAACCCGTTTGCCTGGATCAAAGAGGCTCTGACTTCCACAGAGCAGGAACTTATAGCCATTTCTGGGGTTGACACTGCTGTCTACTTTGTCTTCTTAAGCACTGTGTTGGGAATACTGGTTTTGTCCAGCTTGATACTGCTACCAATGCTTCTGCCAGTTTCTGCCACTGACACTGGAGACACCACAACAAACACCACCACCAGCAACGGGACTTTCTCTGACCTTGACAAGTTATCCATAGGAAATGTCCAGGCGAAGAGTCCAAGGCTGTGGGCGTTTCTCCTAGGTGTCTACTGGGTTTCTTTTGTTACATATATCTTGTTGTGGAAGGCGTATAAACATGTCTCCGATCTGAGAGCCAATGCTTTAATGTCTCCTGATGTCAAGCCTGAACAATTTGCTGTTCTTGTTAGAGACATACCTGCTGTGCGTGAAGGTCCAAATAGAAAGGACCAGGTCGATTCATATTTCAGGGCCATCTACCCCGAGACCTATTACAAATCACTGATTGTTACAGACAATAAAGAGGTGAACAAACTTTGGAAAGAGTTAGAAGGGTTTAGGAAGAAGCTTGAACGTGCTGAAGCAGTTTATGCAGCATCCAAAACAACAGGCAGTCCAGAAGGAACAAGACCCACTAACAAAACTGGCTTCCTTGGTCTTTGTGGGGCAAAGGTTGATAGTATAGAGTACTACACTAAGAAGATTAATGAAACAATCCCAAAATTGGAAGCTGAACAAAAAGCCACTCTCAGAGAGAAGCAGCTAAATGCTGCTATAGTTTTCTTCACTAGTAGGGCGGCTGCAGCTTCTGCAGCACAGAGTCTACATGCCAAAATGGATGACAAATGGACAGTCACGGATGCTCCTGAACCTCGTCAAGTTCTTTGGCCTAATCTCAAAATCAAGTTTTTCCAGAGGCAAGTGCGGCAGTATGTTGTGTATATCATTGTGGCTCTGACCGTGGTGTTTTATATGATCCCAATTGCATTCATCTCTGCATTCACAACTCTGGATAATCTGGTGAAACTTATCCCATTTATCAAGCCAGTTGTGCATCAATCTGCGCTCAAGACAGTGCTGGAGGCATTTCTTCCTCAGCTTGCACTTATAATCTTCTTAGCTTTGTTGCCGAAGCTACTTTTCGCTCTGTCTAAAGCCGAGGGAATTCCTTCTCAGAGCCATGCAGTACGGTCTGCCTCTGGAAAATATTTCTATTTCACTGTGTTCAATGTTTTTCTTGGAGTTACTATAGGTGGAACCTTGTTCAGTACATTCAAGGAAATCGAGAAGAATCCCAATCTCAATAAAATTATTACCTTACTGGCAACTAGCCTCCCAGGAAATGCAACTTACTTCGTCACCTTTGTGGCTCTGAAGTTTTTTATTGGCTATGGTCTTGAACTATCCCGATTAGTTCCTCTGATCATTTTCCATCTGAAAAGGAAGTATCTTTGTAAGACTGAAGGCGAGTTGAAAGCAGCTTGGCAACCTAGTGATCTGGGGTATGGGACTAGAGTTCCTGGTGATATGCTCATCATAACAATTGTTCTCTGCTACTCTGTTATTGCTCCACTGATCATTCCATTTGGTGTGCTGTACTTTGGCATCGGATGGCTTGTCCTTCGAAACCAGGCACTCAAAGTGTATTGTCCAGCGTATGAAAGTTATGGAAGGTTCTGGCCACACATGCAGATCCGGATTCTTGCAGCTCTGATATTGTACCAAGTTACCATGTTTGGTTTCTTTGGGGTAAAGAAATTTATATATGCACCGTTTGTGATCCCACTTCCTATCCTCTCCTTGATCTTCTGTTACACCTGTAGCAAGAAATTCTACCGATTTTTCAAAGACGCTGCTCTTGAAGTTGTGTCTCATGAACTGAAAGACATTCCTAACATGGAGCAAATTTATAAATCTTACCTCCCACCAAGCCTGAGCTCTGAGAAAGTACTACTAGATGATGATCAATTCGAAGATGCCAAGTCAAATGTGTCAAGAACAACATCATTTGCCTGA

Protein Analysis

728

Amino Acids

81.92

Weight (kDa)

9.33

Isoelectric Point (pI)

29.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RSN1_TM PF13967 5 - 166 1.8e-34 Late exocytosis, associated with Golgi transport
PHM7_cyt PF14703 188 - 355 1e-38 Cytosolic domain of 10TM putative phosphate transporter
RSN1_7TM PF02714 366 - 639 4.7e-79 Calcium-dependent channel, 7TM region, putative phosphate
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1280, 2082
AasI GACNNNNNNGTC 1 cut(s) 245
AatII GACGTC 1 cut(s) 26
Acc36I ACCTGC 1 cut(s) 598
AccI GTMKAC 3 cut(s) 249, 459, 994
AccII CGCG 2 cut(s) 74, 101
AccIII TCCGGA 1 cut(s) 1866
AciI CCGC 4 cut(s) 101, 153, 968, 1096
AclWI GGATC 9 cut(s) 12, 118, 131, 134, 147, 191, 1141, 1858, 1945
AcoI YGGCCR 1 cut(s) 1850
AcsI RAATTY 4 cut(s) 1335, 1928, 2000, 2076
AcuI CTGAAG 3 cut(s) 771, 1565, 1653
AcyI GRCGYC 1 cut(s) 23
AfaI GTAC 7 cut(s) 110, 860, 1359, 1441, 1769, 1892, 2121
AfiI CCNNNNNNNGG 5 cut(s) 149, 165, 231, 375, 895
AflII CTTAAG 1 cut(s) 262
AflIII ACRYGT 1 cut(s) 508
AgsI TTSAA 7 cut(s) 743, 1399, 1447, 1571, 1645, 2017, 2033
AhlI ACTAGT 1 cut(s) 959
AjnI CCWGG 6 cut(s) 179, 417, 621, 1507, 1690, 1800
AleI CACNNNNGTG 1 cut(s) 1535
Alw21I GWGCWC 1 cut(s) 2111
Alw26I GTCTC 6 cut(s) 339, 517, 546, 576, 650, 2046
AlwI GGATC 9 cut(s) 12, 118, 131, 134, 147, 191, 1141, 1858, 1945
AlwNI CAGNNNCTG 2 cut(s) 329, 980
Ama87I CYCGRG 2 cut(s) 92, 653
Aor13HI TCCGGA 1 cut(s) 1866
AoxI GGCC 3 cut(s) 642, 1058, 1850
ApeKI GCWGC 9 cut(s) 764, 931, 941, 971, 974, 983, 1649, 1877, 2024
ApoI RAATTY 4 cut(s) 1335, 1928, 2000, 2076
ArsI GACNNNNNNTTYG 2 cut(s) 1008, 1040
AseI ATTAAT 1 cut(s) 876
Asp700I GAANNNNTTC 1 cut(s) 1339
AspA2I CCTAGG 1 cut(s) 451
AspLEI GCGC 1 cut(s) 1237
AspS9I GGNCC 5 cut(s) 33, 156, 605, 619, 642
AsuC2I CCSGG 3 cut(s) 93, 94, 166
AsuHPI GGTGA 4 cut(s) 709, 1204, 1522, 1706
AsuII TTCGAA 2 cut(s) 1795, 2142
AvaI CYCGRG 2 cut(s) 92, 653
AvaII GGWCC 4 cut(s) 33, 156, 605, 619
AvrII CCTAGG 1 cut(s) 451
BalI TGGCCA 1 cut(s) 1852
BamHI GGATCC 2 cut(s) 123, 139
BanII GRGCYC 1 cut(s) 2111
BbsI GAAGAC 1 cut(s) 250
Bbv12I GWGCWC 1 cut(s) 2111
BbvCI CCTCAGC 1 cut(s) 1266
BbvI GCAGC 9 cut(s) 776, 928, 943, 958, 986, 995, 1661, 1889, 2011
BccI CCATC 3 cut(s) 653, 1611, 1776
BciT130I CCWGG 6 cut(s) 181, 419, 623, 1509, 1692, 1802
BclI TGATCA 3 cut(s) 1593, 1746, 2134
BcnI CCSGG 3 cut(s) 93, 94, 166
BcoDI GTCTC 6 cut(s) 339, 517, 546, 576, 650, 2046
BcuI ACTAGT 1 cut(s) 959
BfaI CTAG 6 cut(s) 452, 960, 1500, 1662, 1683, 2126
BfmI CTRYAG 5 cut(s) 945, 972, 981, 1419, 1990
BfrI CTTAAG 1 cut(s) 262
BfuAI ACCTGC 1 cut(s) 598
BlnI CCTAGG 1 cut(s) 451
BmcAI AGTACT 2 cut(s) 860, 2121
Bme1390I CCNGG 9 cut(s) 93, 94, 166, 181, 419, 623, 1509, 1692, 1802
Bme18I GGWCC 4 cut(s) 33, 156, 605, 619
BmeT110I CYCGRG 2 cut(s) 92, 653
BmgT120I GGNCC 5 cut(s) 33, 156, 605, 619, 642
BmiI GGNNCC 6 cut(s) 34, 125, 141, 157, 170, 1429
BmrFI CCNGG 9 cut(s) 93, 94, 166, 181, 419, 623, 1509, 1692, 1802
BmrI ACTGGG 1 cut(s) 472
BmsI GCATC 5 cut(s) 776, 1021, 1234, 1785, 2137
BmuI ACTGGG 1 cut(s) 472
BpiI GAAGAC 1 cut(s) 250
BpmI CTGGAG 2 cut(s) 363, 1271
Bpu10I CCTNAGC 2 cut(s) 1266, 2105
Bpu14I TTCGAA 2 cut(s) 1795, 2142
BpuEI CTTGAG 2 cut(s) 113, 1223
BpuMI CCSGG 3 cut(s) 93, 94, 166
BsaBI GATNNNNATC 1 cut(s) 2133
BsaHI GRCGYC 1 cut(s) 23
BsaI GGTCTC 1 cut(s) 650
BsaJI CCNNGG 8 cut(s) 92, 143, 431, 451, 823, 1131, 1329, 1507
BsaWI WCCGGW 1 cut(s) 1866
BsaXI ACNNNNNCTCC 4 cut(s) 140, 170, 1018, 1048
Bsc4I CCNNNNNNNGG 5 cut(s) 149, 165, 231, 375, 895
Bse1I ACTGG 7 cut(s) 288, 323, 346, 467, 820, 1217, 1497
Bse8I GATNNNNATC 1 cut(s) 2133
BseAI TCCGGA 1 cut(s) 1866
BseBI CCWGG 6 cut(s) 181, 419, 623, 1509, 1692, 1802
BseDI CCNNGG 8 cut(s) 92, 143, 431, 451, 823, 1131, 1329, 1507
BseGI GGATG 4 cut(s) 767, 1015, 1036, 1787
BseJI GATNNNNATC 1 cut(s) 2133
BseLI CCNNNNNNNGG 5 cut(s) 149, 165, 231, 375, 895
BseMII CTCAG 7 cut(s) 22, 512, 934, 1280, 1358, 2096, 2103
BseNI ACTGG 7 cut(s) 288, 323, 346, 467, 820, 1217, 1497
BseXI GCAGC 9 cut(s) 776, 928, 943, 958, 986, 995, 1661, 1889, 2011
Bsh1236I CGCG 2 cut(s) 74, 101
BshFI GGCC 3 cut(s) 644, 1060, 1852
BsiHKAI GWGCWC 1 cut(s) 2111
BsiHKCI CYCGRG 2 cut(s) 92, 653
BsiSI CCGG 3 cut(s) 93, 166, 1867
BslFI GGGAC 3 cut(s) 46, 391, 1693
BslI CCNNNNNNNGG 5 cut(s) 149, 165, 231, 375, 895
BsmAI GTCTC 6 cut(s) 339, 517, 546, 576, 650, 2046
BsmFI GGGAC 3 cut(s) 46, 391, 1693
BsmI GAATGC 2 cut(s) 1157, 1169
BsnI GGCC 3 cut(s) 644, 1060, 1852
Bso31I GGTCTC 1 cut(s) 650
BsoBI CYCGRG 2 cut(s) 92, 653
Bsp119I TTCGAA 2 cut(s) 1795, 2142
Bsp1286I GDGCHC 1 cut(s) 2111
Bsp13I TCCGGA 1 cut(s) 1866
BspACI CCGC 4 cut(s) 101, 153, 968, 1096
BspANI GGCC 3 cut(s) 644, 1060, 1852
BspCNI CTCAG 7 cut(s) 21, 513, 933, 1279, 1357, 2097, 2104
BspEI TCCGGA 1 cut(s) 1866
BspFNI CGCG 2 cut(s) 74, 101
BspHI TCATGA 1 cut(s) 2044
BspLI GGNNCC 6 cut(s) 34, 125, 141, 157, 170, 1429
BspMAI CTGCAG 2 cut(s) 976, 985
BspMI ACCTGC 1 cut(s) 598
BspPI GGATC 9 cut(s) 12, 118, 131, 134, 147, 191, 1141, 1858, 1945
BspT104I TTCGAA 2 cut(s) 1795, 2142
BspTI CTTAAG 1 cut(s) 262
BspTNI GGTCTC 1 cut(s) 650
BsrI ACTGG 7 cut(s) 288, 323, 346, 467, 820, 1217, 1497
BssECI CCNNGG 8 cut(s) 92, 143, 431, 451, 823, 1131, 1329, 1507
BssNI GRCGYC 1 cut(s) 23
BssT1I CCWWGG 3 cut(s) 431, 451, 823
Bst2UI CCWGG 6 cut(s) 181, 419, 623, 1509, 1692, 1802
Bst4CI ACNGT 7 cut(s) 271, 1024, 1132, 1246, 1362, 1393, 1944
Bst6I CTCTTC 1 cut(s) 419
BstACI GRCGYC 1 cut(s) 23
BstAFI CTTAAG 1 cut(s) 262
BstAPI GCANNNNNTGC 2 cut(s) 761, 980
BstBI TTCGAA 2 cut(s) 1795, 2142
BstC8I GCNNGC 1 cut(s) 1272
BstDEI CTNAG 9 cut(s) 8, 521, 867, 920, 1266, 1288, 1344, 2105, 2112
BstDSI CCRYGG 2 cut(s) 143, 1131
BstF5I GGATG 4 cut(s) 767, 1015, 1036, 1787
BstFNI CGCG 2 cut(s) 74, 101
BstHHI GCGC 1 cut(s) 1237
BstMAI GTCTC 6 cut(s) 339, 517, 546, 576, 650, 2046
BstMWI GCNNNNNNNGC 8 cut(s) 313, 761, 974, 980, 983, 1096, 1222, 1858
BstNI CCWGG 6 cut(s) 181, 419, 623, 1509, 1692, 1802
BstNSI RCATGY 3 cut(s) 512, 1001, 1861
BstSCI CCNGG 9 cut(s) 91, 92, 164, 179, 417, 621, 1507, 1690, 1800
BstSFI CTRYAG 5 cut(s) 945, 972, 981, 1419, 1990
BstUI CGCG 2 cut(s) 74, 101
BstV1I GCAGC 9 cut(s) 776, 928, 943, 958, 986, 995, 1661, 1889, 2011
BstV2I GAAGAC 1 cut(s) 250
BstX2I RGATCY 4 cut(s) 4, 123, 139, 1863
BstXI CCANNNNNNTGG 1 cut(s) 438
BstYI RGATCY 4 cut(s) 4, 123, 139, 1863
BsuRI GGCC 3 cut(s) 644, 1060, 1852
BtgI CCRYGG 2 cut(s) 143, 1131
BtsCI GGATG 4 cut(s) 767, 1015, 1036, 1787
BtsI GCAGTG 1 cut(s) 240
BtsIMutI CAGTG 8 cut(s) 240, 267, 333, 339, 671, 1251, 1389, 1742
BveI ACCTGC 1 cut(s) 598
Cac8I GCNNGC 1 cut(s) 1272
CaiI CAGNNNCTG 2 cut(s) 329, 980
CciI TCATGA 1 cut(s) 2044
CfoI GCGC 1 cut(s) 1237
Cfr13I GGNCC 5 cut(s) 33, 156, 605, 619, 642
Cfr9I CCCGGG 1 cut(s) 92
CseI GACGC 1 cut(s) 2030
CsiI ACCWGGT 1 cut(s) 621
Csp6I GTAC 7 cut(s) 109, 859, 1358, 1440, 1768, 1891, 2120
CviAII CATG 7 cut(s) 509, 998, 1352, 1858, 1903, 2045, 2068
CviQI GTAC 7 cut(s) 109, 859, 1358, 1440, 1768, 1891, 2120
DdeI CTNAG 9 cut(s) 8, 521, 867, 920, 1266, 1288, 1344, 2105, 2112
DrdI GACNNNNNNGTC 1 cut(s) 245
DseDI GACNNNNNNGTC 1 cut(s) 245
EaeI YGGCCR 1 cut(s) 1850
Eam1104I CTCTTC 1 cut(s) 419
EarI CTCTTC 1 cut(s) 419
Ecl136II GAGCTC 1 cut(s) 2109
Eco130I CCWWGG 3 cut(s) 431, 451, 823
Eco24I GRGCYC 1 cut(s) 2111
Eco31I GGTCTC 1 cut(s) 650
Eco47I GGWCC 4 cut(s) 33, 156, 605, 619
Eco53kI GAGCTC 1 cut(s) 2109
Eco57I CTGAAG 3 cut(s) 771, 1565, 1653
Eco88I CYCGRG 2 cut(s) 92, 653
EcoICRI GAGCTC 1 cut(s) 2109
EcoO109I RGGNCCY 1 cut(s) 33
EcoRI GAATTC 1 cut(s) 1335
EcoRII CCWGG 6 cut(s) 179, 417, 621, 1507, 1690, 1800
EcoT14I CCWWGG 3 cut(s) 431, 451, 823
EcoT38I GRGCYC 1 cut(s) 2111
ErhI CCWWGG 3 cut(s) 431, 451, 823
FaeI CATG 7 cut(s) 512, 1001, 1355, 1861, 1906, 2048, 2071
FaqI GGGAC 3 cut(s) 46, 391, 1693
FatI CATG 7 cut(s) 508, 997, 1351, 1857, 1902, 2044, 2067
FauI CCCGC 1 cut(s) 146
FbaI TGATCA 3 cut(s) 1593, 1746, 2134
FblI GTMKAC 3 cut(s) 249, 459, 994
FokI GGATG 4 cut(s) 754, 1022, 1043, 1794
FriOI GRGCYC 1 cut(s) 2111
FspBI CTAG 6 cut(s) 452, 960, 1500, 1662, 1683, 2126
GlaI GCGC 1 cut(s) 1236
GsuI CTGGAG 2 cut(s) 363, 1271
HaeIII GGCC 3 cut(s) 644, 1060, 1852
HapII CCGG 3 cut(s) 93, 166, 1867
HgaI GACGC 1 cut(s) 2030
HhaI GCGC 1 cut(s) 1237
Hin1I GRCGYC 1 cut(s) 23
Hin1II CATG 7 cut(s) 512, 1001, 1355, 1861, 1906, 2048, 2071
Hin6I GCGC 1 cut(s) 1235
HinP1I GCGC 1 cut(s) 1235
HincII GTYRAC 1 cut(s) 238
HindII GTYRAC 1 cut(s) 238
HindIII AAGCTT 1 cut(s) 737
HinfI GANTC 6 cut(s) 55, 427, 629, 991, 1462, 1870
HpaII CCGG 3 cut(s) 93, 166, 1867
HphI GGTGA 4 cut(s) 709, 1204, 1522, 1706
Hpy166II GTNNAC 6 cut(s) 109, 238, 250, 460, 700, 995
Hpy8I GTNNAC 6 cut(s) 109, 238, 250, 460, 700, 995
Hpy99I CGWCG 1 cut(s) 28
HpyAV CCTTC 8 cut(s) 490, 596, 716, 785, 1350, 1628, 1802, 1836
HpyCH4III ACNGT 7 cut(s) 271, 1024, 1132, 1246, 1362, 1393, 1944
HpyCH4IV ACGT 2 cut(s) 23, 745
HpyF10VI GCNNNNNNNGC 8 cut(s) 313, 761, 974, 980, 983, 1096, 1222, 1858
HpyF3I CTNAG 9 cut(s) 8, 521, 867, 920, 1266, 1288, 1344, 2105, 2112
HpySE526I ACGT 2 cut(s) 23, 745
Hsp92I GRCGYC 1 cut(s) 23
Hsp92II CATG 7 cut(s) 512, 1001, 1355, 1861, 1906, 2048, 2071
HspAI GCGC 1 cut(s) 1235
Kpn2I TCCGGA 1 cut(s) 1866
Ksp22I TGATCA 3 cut(s) 1593, 1746, 2134
LmnI GCTCC 3 cut(s) 1039, 1744, 2071
Lsp1109I GCAGC 9 cut(s) 776, 928, 943, 958, 986, 995, 1661, 1889, 2011
LweI GCATC 5 cut(s) 776, 1021, 1234, 1785, 2137
MabI ACCWGGT 1 cut(s) 621
MaeI CTAG 6 cut(s) 452, 960, 1500, 1662, 1683, 2126
MaeII ACGT 2 cut(s) 23, 745
MaeIII GTNAC 7 cut(s) 475, 679, 1024, 1414, 1528, 1897, 1982
MfeI CAATTG 2 cut(s) 1152, 1713
MflI RGATCY 4 cut(s) 4, 123, 139, 1863
MhlI GDGCHC 1 cut(s) 2111
MlsI TGGCCA 1 cut(s) 1852
MluNI TGGCCA 1 cut(s) 1852
MlyI GAGTC 2 cut(s) 436, 1000
Mox20I TGGCCA 1 cut(s) 1852
MroI TCCGGA 1 cut(s) 1866
MroXI GAANNNNTTC 1 cut(s) 1339
MscI TGGCCA 1 cut(s) 1852
MseI TTAA 3 cut(s) 263, 536, 876
MslI CAYNNNNRTG 1 cut(s) 1535
Msp20I TGGCCA 1 cut(s) 1852
MspCI CTTAAG 1 cut(s) 262
MspI CCGG 3 cut(s) 93, 166, 1867
MspR9I CCNGG 9 cut(s) 93, 94, 166, 181, 419, 623, 1509, 1692, 1802
MunI CAATTG 2 cut(s) 1152, 1713
Mva1269I GAATGC 2 cut(s) 1157, 1169
MvaI CCWGG 6 cut(s) 181, 419, 623, 1509, 1692, 1802
MvnI CGCG 2 cut(s) 74, 101
MwoI GCNNNNNNNGC 8 cut(s) 313, 761, 974, 980, 983, 1096, 1222, 1858
NciI CCSGG 3 cut(s) 93, 94, 166
NlaIII CATG 7 cut(s) 512, 1001, 1355, 1861, 1906, 2048, 2071
NlaIV GGNNCC 6 cut(s) 34, 125, 141, 157, 170, 1429
NmeAIII GCCGAG 1 cut(s) 1354
NmuCI GTSAC 2 cut(s) 1024, 1528
NspI RCATGY 3 cut(s) 512, 1001, 1861
NspV TTCGAA 2 cut(s) 1795, 2142
OliI CACNNNNGTG 1 cut(s) 1535
PagI TCATGA 1 cut(s) 2044
PciI ACATGT 1 cut(s) 508
PcsI WCGNNNNNNNCGW 1 cut(s) 20
PctI GAATGC 2 cut(s) 1157, 1169
PdmI GAANNNNTTC 1 cut(s) 1339
PfeI GAWTC 4 cut(s) 55, 629, 1462, 1870
PflFI GACNNNGTC 1 cut(s) 623
PleI GAGTC 2 cut(s) 435, 999
PpsI GAGTC 2 cut(s) 435, 999
PpuMI RGGWCCY 1 cut(s) 33
PscI ACATGT 1 cut(s) 508
PshBI ATTAAT 1 cut(s) 876
PsiI TTATAA 2 cut(s) 1280, 2082
Psp124BI GAGCTC 1 cut(s) 2111
Psp5II RGGWCCY 1 cut(s) 33
Psp6I CCWGG 6 cut(s) 179, 417, 621, 1507, 1690, 1800
PspGI CCWGG 6 cut(s) 179, 417, 621, 1507, 1690, 1800
PspN4I GGNNCC 6 cut(s) 34, 125, 141, 157, 170, 1429
PspPI GGNCC 5 cut(s) 33, 156, 605, 619, 642
PspPPI RGGWCCY 1 cut(s) 33
PstI CTGCAG 2 cut(s) 976, 985
PstNI CAGNNNCTG 2 cut(s) 329, 980
PsuI RGATCY 4 cut(s) 4, 123, 139, 1863
PsyI GACNNNGTC 1 cut(s) 623
RsaI GTAC 7 cut(s) 110, 860, 1359, 1441, 1769, 1892, 2121
RsaNI GTAC 7 cut(s) 109, 859, 1358, 1440, 1768, 1891, 2120
RseI CAYNNNNRTG 1 cut(s) 1535
SacI GAGCTC 1 cut(s) 2111
SaqAI TTAA 3 cut(s) 263, 536, 876
Sau96I GGNCC 5 cut(s) 33, 156, 605, 619, 642
ScaI AGTACT 2 cut(s) 860, 2121
SchI GAGTC 2 cut(s) 436, 1000
ScrFI CCNGG 9 cut(s) 93, 94, 166, 181, 419, 623, 1509, 1692, 1802
SduI GDGCHC 1 cut(s) 2111
SexAI ACCWGGT 1 cut(s) 621
SfaNI GCATC 5 cut(s) 776, 1021, 1234, 1785, 2137
SfcI CTRYAG 5 cut(s) 945, 972, 981, 1419, 1990
SfuI TTCGAA 2 cut(s) 1795, 2142
SinI GGWCC 4 cut(s) 33, 156, 605, 619
SmaI CCCGGG 1 cut(s) 94
SmiMI CAYNNNNRTG 1 cut(s) 1535
SmlI CTYRAG 3 cut(s) 128, 262, 1238
SmoI CTYRAG 3 cut(s) 128, 262, 1238
SpeI ACTAGT 1 cut(s) 959
SsiI CCGC 4 cut(s) 101, 153, 968, 1096
SspI AATATT 1 cut(s) 1379
SspMI CTAG 6 cut(s) 452, 960, 1500, 1662, 1683, 2126
SstI GAGCTC 1 cut(s) 2111
StyD4I CCNGG 9 cut(s) 91, 92, 164, 179, 417, 621, 1507, 1690, 1800
StyI CCWWGG 3 cut(s) 431, 451, 823
TaaI ACNGT 7 cut(s) 271, 1024, 1132, 1246, 1362, 1393, 1944
TaiI ACGT 2 cut(s) 26, 748
TaqI TCGA 5 cut(s) 83, 627, 1455, 1795, 2142
TatI WGTACW 5 cut(s) 108, 858, 1439, 1767, 2119
TauI GCSGC 2 cut(s) 971, 1099
TfiI GAWTC 4 cut(s) 55, 629, 1462, 1870
Tru1I TTAA 3 cut(s) 263, 536, 876
Tru9I TTAA 3 cut(s) 263, 536, 876
TscAI CASTG 8 cut(s) 247, 274, 340, 346, 678, 1251, 1396, 1749
TseFI GTSAC 2 cut(s) 1024, 1528
TseI GCWGC 9 cut(s) 764, 931, 941, 971, 974, 983, 1649, 1877, 2024
Tsp45I GTSAC 2 cut(s) 1024, 1528
TspDTI ATGAA 5 cut(s) 621, 894, 1150, 1845, 2061
TspGWI ACGGA 2 cut(s) 132, 1043
TspMI CCCGGG 1 cut(s) 92
TspRI CASTG 8 cut(s) 247, 274, 340, 346, 678, 1251, 1396, 1749
Tth111I GACNNNGTC 1 cut(s) 623
Vha464I CTTAAG 1 cut(s) 262
VpaK11BI GGWCC 4 cut(s) 33, 156, 605, 619
VspI ATTAAT 1 cut(s) 876
XapI RAATTY 4 cut(s) 1335, 1928, 2000, 2076
XceI RCATGY 3 cut(s) 512, 1001, 1861
XmaI CCCGGG 1 cut(s) 92
XmaJI CCTAGG 1 cut(s) 451
XmiI GTMKAC 3 cut(s) 249, 459, 994
XmnI GAANNNNTTC 1 cut(s) 1339
XspI CTAG 6 cut(s) 452, 960, 1500, 1662, 1683, 2126
ZraI GACGTC 1 cut(s) 24
ZrmI AGTACT 2 cut(s) 860, 2121
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.