Rmu_ssc0000197.1_g000059

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000197.1
OG0000079
Physical Location & Seq
Forward (+)
253133 .. 257360
4228 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000197.1_g000059.1.cds

Sequence Viewer

Length: 1527 bp
atggatcaaaggcttcctaaattgaccagggtagaaatggtttcggagtcaaagcaacagcatggagttgataggattagtgaattgcctgatggagttctttgtcacatactatcgtttcttccgacaatagatgttgtgcggaccgccattttgtcagcaagatggaagaacatatggacttctgtttgcaatctagacttctccgaccaagattttcctccaacttggatctcctctgatcgttttgtgacatttgttgatcacgcactttccttgcgctcctcgtcagacatacagaaatttcgaataaagcaaagcagggtttcatatttcagtgatgaggaattctctcgttttgaaggctggatttgcactgcaatcaggcataatgttgttgacctgaatctttttgttggtgttgaagattacttggaacttaaatacaaaatgcctcaaagccttttcctgagcaagacactcgtgagtttgaagctgtttgaaagttgttttagctatgttcctcctacgacagggtgtttcccaagtctcaagttcctatctgctgcgtttgtttttcctgatatgcaatcgatggaaaatctcttttctcattgccctgtacttgaagatttgactatattggcatccctcggagatcaggacaatttaagtgtcaatatatttacacctgaattgaagaaattatcaataaatttgcacacttattcgattgagggaaaagatcgtctgtccagttgcattattaatgccccaaagctggaaaccctttatctcaagatggatggtttgacatattactttctggagaaggcacattttctagcccaggccagacttgagttcaatgacagatgtaaagataaccctgcttttgctgaccatgcaatcaagttattgggaggaatttccagtgttcaagagctgttgctttcagtttattctttggaggtttgttctctgcctaactttaataatttgaccacattggagctggctcttcaagaatctcagtactgggaattgctgatagaaatgctgaagagatcacctaatttggaatgtcttgagttatgctatgatggtgttacatggcgtgaagaatatggagatcaatggaatccagtcaatccaccagagttggttcctacttgtctctcatcacacctcaccagcatctcgatatgggaattcaaaggacagctagatgagatggaagtgattgggttcgcatcagacgcgatcactttcatctgcatcagacataatccggcatcagaccagattacgtcgagcccccggtttccagttggtttcatctgcatcacccagagagtcgcgctcacagactcgtcgtcgcctagatccgtcgtgggtacagaccagatcgccgtctccagaccggcgtcatctggccaaacggctccagtcccaggcgtcagtcaggcaagttcagttctcggcccggtcgactccttcatcctccttcgtcccagactagactaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

508

Amino Acids

57.28

Weight (kDa)

5.05

Isoelectric Point (pI)

51.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1491
AccII CGCG 2 cut(s) 1262, 1361
AciI CCGC 2 cut(s) 142, 147
AclWI GGATC 3 cut(s) 12, 239, 1380
AcoI YGGCCR 1 cut(s) 1435
AcsI RAATTY 5 cut(s) 302, 347, 715, 927, 1211
AcuI CTGAAG 1 cut(s) 1082
AcyI GRCGYC 2 cut(s) 1427, 1458
AfaI GTAC 3 cut(s) 624, 1037, 1399
AfiI CCNNNNNNNGG 3 cut(s) 533, 781, 1454
AhdI GACNNNNNGTC 1 cut(s) 1375
AjnI CCWGG 3 cut(s) 26, 849, 1453
AluBI AGCT 6 cut(s) 496, 516, 781, 946, 1015, 1225
AluI AGCT 6 cut(s) 496, 516, 781, 946, 1015, 1225
Alw26I GTCTC 3 cut(s) 554, 1181, 1420
AlwI GGATC 3 cut(s) 12, 239, 1380
AoxI GGCC 3 cut(s) 852, 1435, 1483
ApeKI GCWGC 1 cut(s) 566
ApoI RAATTY 5 cut(s) 302, 347, 715, 927, 1211
ArsI GACNNNNNNTTYG 2 cut(s) 136, 168
AseI ATTAAT 1 cut(s) 768
AspLEI GCGC 2 cut(s) 282, 1363
AspS9I GGNCC 2 cut(s) 144, 1484
AsuC2I CCSGG 2 cut(s) 1321, 1487
AsuHPI GGTGA 3 cut(s) 1062, 1183, 1339
AsuII TTCGAA 1 cut(s) 307
AvaII GGWCC 1 cut(s) 144
BalI TGGCCA 1 cut(s) 1437
BanII GRGCYC 1 cut(s) 1319
BauI CACGAG 1 cut(s) 482
BbvI GCAGC 1 cut(s) 553
BccI CCATC 7 cut(s) 86, 159, 589, 796, 800, 1097, 1228
BceAI ACGGC 2 cut(s) 1397, 1458
BcgI CGANNNNNNTGC 2 cut(s) 463, 497
BciT130I CCWGG 3 cut(s) 28, 851, 1455
BclI TGATCA 1 cut(s) 262
BcnI CCSGG 2 cut(s) 1321, 1487
BcoDI GTCTC 3 cut(s) 554, 1181, 1420
BfaI CTAG 5 cut(s) 197, 845, 1226, 1383, 1520
BisI GCNGC 1 cut(s) 567
BlsI GCNGC 1 cut(s) 568
BmcAI AGTACT 1 cut(s) 1037
Bme1390I CCNGG 5 cut(s) 28, 851, 1321, 1455, 1487
Bme18I GGWCC 1 cut(s) 144
BmeRI GACNNNNNGTC 1 cut(s) 1375
BmgT120I GGNCC 2 cut(s) 144, 1484
BmiI GGNNCC 2 cut(s) 1167, 1446
BmrFI CCNGG 5 cut(s) 28, 851, 1321, 1455, 1487
BmrI ACTGGG 1 cut(s) 1048
BmsI GCATC 6 cut(s) 656, 1206, 1262, 1287, 1304, 1353
BmuI ACTGGG 1 cut(s) 1048
BoxI GACNNNNGTC 1 cut(s) 1426
BplI GAGNNNNNCTC 4 cut(s) 335, 367, 1347, 1379
BpmI CTGGAG 3 cut(s) 848, 1402, 1431
Bpu10I CCTNAGC 1 cut(s) 470
Bpu14I TTCGAA 1 cut(s) 307
BpuEI CTTGAG 4 cut(s) 536, 782, 881, 1109
BpuMI CCSGG 2 cut(s) 1321, 1487
Bsa29I ATCGAT 1 cut(s) 593
BsaHI GRCGYC 2 cut(s) 1427, 1458
BsaJI CCNNGG 5 cut(s) 27, 652, 849, 1319, 1453
Bsc4I CCNNNNNNNGG 3 cut(s) 533, 781, 1454
Bse118I RCCGGY 1 cut(s) 1423
Bse1I ACTGG 6 cut(s) 756, 933, 1043, 1145, 1328, 1448
Bse3DI GCAATG 1 cut(s) 613
BseBI CCWGG 3 cut(s) 28, 851, 1455
BseCI ATCGAT 1 cut(s) 593
BseDI CCNNGG 5 cut(s) 27, 652, 849, 1319, 1453
BseGI GGATG 3 cut(s) 647, 811, 1500
BseLI CCNNNNNNNGG 3 cut(s) 533, 781, 1454
BseMI GCAATG 1 cut(s) 613
BseMII CTCAG 2 cut(s) 461, 1046
BseNI ACTGG 6 cut(s) 756, 933, 1043, 1145, 1328, 1448
BseRI GAGGAG 2 cut(s) 226, 274
BseXI GCAGC 1 cut(s) 553
Bsh1236I CGCG 2 cut(s) 1262, 1361
Bsh1285I CGRYCG 1 cut(s) 1491
BshFI GGCC 3 cut(s) 854, 1437, 1485
BshVI ATCGAT 1 cut(s) 593
BsiEI CGRYCG 1 cut(s) 1491
BsiSI CCGG 4 cut(s) 1292, 1321, 1424, 1487
BslFI GGGAC 2 cut(s) 1436, 1497
BslI CCNNNNNNNGG 3 cut(s) 533, 781, 1454
BsmAI GTCTC 3 cut(s) 554, 1181, 1420
BsmBI CGTCTC 1 cut(s) 1420
BsmFI GGGAC 2 cut(s) 1436, 1497
BsnI GGCC 3 cut(s) 854, 1437, 1485
Bsp119I TTCGAA 1 cut(s) 307
Bsp1286I GDGCHC 1 cut(s) 1319
BspACI CCGC 2 cut(s) 142, 147
BspANI GGCC 3 cut(s) 854, 1437, 1485
BspCNI CTCAG 2 cut(s) 462, 1045
BspDI ATCGAT 1 cut(s) 593
BspFNI CGCG 2 cut(s) 1262, 1361
BspLI GGNNCC 2 cut(s) 1167, 1446
BspPI GGATC 3 cut(s) 12, 239, 1380
BspQI GCTCTTC 1 cut(s) 1026
BspT104I TTCGAA 1 cut(s) 307
BsrDI GCAATG 1 cut(s) 613
BsrFI RCCGGY 1 cut(s) 1423
BsrI ACTGG 6 cut(s) 756, 933, 1043, 1145, 1328, 1448
BssAI RCCGGY 1 cut(s) 1423
BssECI CCNNGG 5 cut(s) 27, 652, 849, 1319, 1453
BssNI GRCGYC 2 cut(s) 1427, 1458
BssSI CACGAG 1 cut(s) 482
Bst2BI CACGAG 1 cut(s) 482
Bst2UI CCWGG 3 cut(s) 28, 851, 1455
Bst6I CTCTTC 2 cut(s) 1026, 1058
BstACI GRCGYC 2 cut(s) 1427, 1458
BstBI TTCGAA 1 cut(s) 307
BstC8I GCNNGC 1 cut(s) 1017
BstDEI CTNAG 2 cut(s) 470, 1032
BstENI CCTNNNNNAGG 1 cut(s) 531
BstF5I GGATG 3 cut(s) 647, 811, 1500
BstFNI CGCG 2 cut(s) 1262, 1361
BstHHI GCGC 2 cut(s) 282, 1363
BstMAI GTCTC 3 cut(s) 554, 1181, 1420
BstMCI CGRYCG 1 cut(s) 1491
BstMWI GCNNNNNNNGC 3 cut(s) 372, 905, 1259
BstNI CCWGG 3 cut(s) 28, 851, 1455
BstPAI GACNNNNGTC 1 cut(s) 1426
BstSCI CCNGG 5 cut(s) 26, 849, 1319, 1453, 1485
BstUI CGCG 2 cut(s) 1262, 1361
BstV1I GCAGC 1 cut(s) 553
BstX2I RGATCY 2 cut(s) 231, 1385
BstYI RGATCY 2 cut(s) 231, 1385
Bsu15I ATCGAT 1 cut(s) 593
BsuRI GGCC 3 cut(s) 854, 1437, 1485
BsuTUI ATCGAT 1 cut(s) 593
BtsCI GGATG 3 cut(s) 647, 811, 1500
BtsI GCAGTG 1 cut(s) 375
BtsIMutI CAGTG 3 cut(s) 343, 375, 940
Cac8I GCNNGC 1 cut(s) 1017
CfoI GCGC 2 cut(s) 282, 1363
Cfr10I RCCGGY 1 cut(s) 1423
Cfr13I GGNCC 2 cut(s) 144, 1484
ClaI ATCGAT 1 cut(s) 593
CpoI CGGWCCG 1 cut(s) 144
CseI GACGC 3 cut(s) 1268, 1416, 1447
Csp6I GTAC 3 cut(s) 623, 1036, 1398
CspCI CAANNNNNGTGG 2 cut(s) 1143, 1178
CspI CGGWCCG 1 cut(s) 144
CviAII CATG 3 cut(s) 62, 905, 1113
CviQI GTAC 3 cut(s) 623, 1036, 1398
DdeI CTNAG 2 cut(s) 470, 1032
DriI GACNNNNNGTC 1 cut(s) 1375
EaeI YGGCCR 1 cut(s) 1435
Eam1104I CTCTTC 2 cut(s) 1026, 1058
Eam1105I GACNNNNNGTC 1 cut(s) 1375
EarI CTCTTC 2 cut(s) 1026, 1058
Eco24I GRGCYC 1 cut(s) 1319
Eco47I GGWCC 1 cut(s) 144
Eco57I CTGAAG 1 cut(s) 1082
EcoNI CCTNNNNNAGG 1 cut(s) 531
EcoRI GAATTC 2 cut(s) 347, 1211
EcoRII CCWGG 3 cut(s) 26, 849, 1453
EcoT38I GRGCYC 1 cut(s) 1319
Esp3I CGTCTC 1 cut(s) 1420
FaeI CATG 3 cut(s) 65, 908, 1116
FaqI GGGAC 2 cut(s) 1436, 1497
FatI CATG 3 cut(s) 61, 904, 1112
FauNDI CATATG 1 cut(s) 176
FbaI TGATCA 1 cut(s) 262
FblI GTMKAC 1 cut(s) 1491
Fnu4HI GCNGC 1 cut(s) 567
FokI GGATG 3 cut(s) 634, 818, 1487
FriOI GRGCYC 1 cut(s) 1319
Fsp4HI GCNGC 1 cut(s) 567
FspBI CTAG 5 cut(s) 197, 845, 1226, 1383, 1520
GlaI GCGC 2 cut(s) 281, 1362
GluI GCNGC 1 cut(s) 567
GsuI CTGGAG 3 cut(s) 848, 1402, 1431
HaeIII GGCC 3 cut(s) 854, 1437, 1485
HapII CCGG 4 cut(s) 1292, 1321, 1424, 1487
HgaI GACGC 3 cut(s) 1268, 1416, 1447
HhaI GCGC 2 cut(s) 282, 1363
Hin1I GRCGYC 2 cut(s) 1427, 1458
Hin1II CATG 3 cut(s) 65, 908, 1116
Hin6I GCGC 2 cut(s) 280, 1361
HinP1I GCGC 2 cut(s) 280, 1361
HincII GTYRAC 2 cut(s) 400, 1492
HindII GTYRAC 2 cut(s) 400, 1492
HinfI GANTC 7 cut(s) 47, 406, 1028, 1141, 1356, 1370, 1493
HpaII CCGG 4 cut(s) 1292, 1321, 1424, 1487
HphI GGTGA 3 cut(s) 1062, 1183, 1339
Hpy166II GTNNAC 2 cut(s) 400, 1492
Hpy188I TCNGA 9 cut(s) 46, 126, 208, 241, 292, 656, 1258, 1283, 1300
Hpy8I GTNNAC 2 cut(s) 400, 1492
Hpy99I CGWCG 4 cut(s) 1315, 1378, 1381, 1394
HpyAV CCTTC 4 cut(s) 356, 826, 1507, 1517
HpyCH4IV ACGT 1 cut(s) 1310
HpyCH4V TGCA 9 cut(s) 192, 375, 380, 589, 721, 762, 908, 1278, 1344
HpyF10VI GCNNNNNNNGC 3 cut(s) 372, 905, 1259
HpyF3I CTNAG 2 cut(s) 470, 1032
HpySE526I ACGT 1 cut(s) 1310
Hsp92I GRCGYC 2 cut(s) 1427, 1458
Hsp92II CATG 3 cut(s) 65, 908, 1116
HspAI GCGC 2 cut(s) 280, 1361
Ksp22I TGATCA 1 cut(s) 262
LguI GCTCTTC 1 cut(s) 1026
LmnI GCTCC 3 cut(s) 287, 1012, 1450
Lsp1109I GCAGC 1 cut(s) 553
LweI GCATC 6 cut(s) 656, 1206, 1262, 1287, 1304, 1353
MaeI CTAG 5 cut(s) 197, 845, 1226, 1383, 1520
MaeII ACGT 1 cut(s) 1310
MaeIII GTNAC 3 cut(s) 104, 250, 1108
MboII GAAGA 8 cut(s) 113, 181, 437, 641, 712, 1013, 1075, 1133
MflI RGATCY 2 cut(s) 231, 1385
MhlI GDGCHC 1 cut(s) 1319
MlsI TGGCCA 1 cut(s) 1437
MluNI TGGCCA 1 cut(s) 1437
MlyI GAGTC 4 cut(s) 56, 1364, 1365, 1487
MmeI TCCRAC 3 cut(s) 149, 231, 248
Mox20I TGGCCA 1 cut(s) 1437
MscI TGGCCA 1 cut(s) 1437
MseI TTAA 4 cut(s) 441, 671, 768, 993
Msp20I TGGCCA 1 cut(s) 1437
MspI CCGG 4 cut(s) 1292, 1321, 1424, 1487
MspR9I CCNGG 5 cut(s) 28, 851, 1321, 1455, 1487
MvaI CCWGG 3 cut(s) 28, 851, 1455
MvnI CGCG 2 cut(s) 1262, 1361
MwoI GCNNNNNNNGC 3 cut(s) 372, 905, 1259
NciI CCSGG 2 cut(s) 1321, 1487
NdeI CATATG 1 cut(s) 176
NlaIII CATG 3 cut(s) 65, 908, 1116
NlaIV GGNNCC 2 cut(s) 1167, 1446
NmeAIII GCCGAG 1 cut(s) 1461
NmuCI GTSAC 2 cut(s) 104, 250
NspV TTCGAA 1 cut(s) 307
PciSI GCTCTTC 1 cut(s) 1026
PcsI WCGNNNNNNNCGW 2 cut(s) 122, 1488
PfeI GAWTC 3 cut(s) 406, 1028, 1141
PkrI GCNGC 1 cut(s) 568
PleI GAGTC 4 cut(s) 55, 1364, 1364, 1487
PpsI GAGTC 4 cut(s) 55, 1364, 1364, 1487
PshAI GACNNNNGTC 1 cut(s) 1426
PshBI ATTAAT 1 cut(s) 768
Psp6I CCWGG 3 cut(s) 26, 849, 1453
PspGI CCWGG 3 cut(s) 26, 849, 1453
PspN4I GGNNCC 2 cut(s) 1167, 1446
PspPI GGNCC 2 cut(s) 144, 1484
PsuI RGATCY 2 cut(s) 231, 1385
RsaI GTAC 3 cut(s) 624, 1037, 1399
RsaNI GTAC 3 cut(s) 623, 1036, 1398
Rsr2I CGGWCCG 1 cut(s) 144
RsrII CGGWCCG 1 cut(s) 144
SalI GTCGAC 1 cut(s) 1490
SapI GCTCTTC 1 cut(s) 1026
SaqAI TTAA 4 cut(s) 441, 671, 768, 993
SatI GCNGC 1 cut(s) 567
Sau96I GGNCC 2 cut(s) 144, 1484
ScaI AGTACT 1 cut(s) 1037
SchI GAGTC 4 cut(s) 56, 1364, 1365, 1487
ScrFI CCNGG 5 cut(s) 28, 851, 1321, 1455, 1487
SduI GDGCHC 1 cut(s) 1319
SfaNI GCATC 6 cut(s) 656, 1206, 1262, 1287, 1304, 1353
SfuI TTCGAA 1 cut(s) 307
SinI GGWCC 1 cut(s) 144
SmlI CTYRAG 4 cut(s) 551, 797, 860, 1088
SmoI CTYRAG 4 cut(s) 551, 797, 860, 1088
SsiI CCGC 2 cut(s) 142, 147
SspMI CTAG 5 cut(s) 197, 845, 1226, 1383, 1520
StyD4I CCNGG 5 cut(s) 26, 849, 1319, 1453, 1485
TaiI ACGT 1 cut(s) 1313
TaqI TCGA 6 cut(s) 307, 593, 731, 1202, 1313, 1491
TatI WGTACW 2 cut(s) 622, 1035
TfiI GAWTC 3 cut(s) 406, 1028, 1141
Tru1I TTAA 4 cut(s) 441, 671, 768, 993
Tru9I TTAA 4 cut(s) 441, 671, 768, 993
TscAI CASTG 3 cut(s) 343, 382, 940
TseFI GTSAC 2 cut(s) 104, 250
TseI GCWGC 1 cut(s) 566
Tsp45I GTSAC 2 cut(s) 104, 250
TspDTI ATGAA 4 cut(s) 318, 1261, 1327, 1489
TspGWI ACGGA 1 cut(s) 1378
TspRI CASTG 3 cut(s) 343, 382, 940
VpaK11BI GGWCC 1 cut(s) 144
VspI ATTAAT 1 cut(s) 768
XagI CCTNNNNNAGG 1 cut(s) 531
XapI RAATTY 5 cut(s) 302, 347, 715, 927, 1211
XbaI TCTAGA 1 cut(s) 196
XcmI CCANNNNNNNNNTGG 2 cut(s) 34, 1012
XmiI GTMKAC 1 cut(s) 1491
XspI CTAG 5 cut(s) 197, 845, 1226, 1383, 1520
ZrmI AGTACT 1 cut(s) 1037
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.