Rw7G014650

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000079
Physical Location & Seq
Forward (+)
14378265 .. 14379985
1721 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G014650.1

Sequence Viewer

Length: 1485 bp
ATGGCTTCAAACTCAACTCTTCGCAAATCACGCAATGAGGACAGGATCAGTGAGTTGCCAGATGCAATTCTTTGCCACATTCTCTCCTTCTTTTCAACCAGAGAGGCTGTAAAGACTAGCATTTTATCACATAGATGGAAGAATGTCTGGGCTTCTGTTCCCAATCTAGATTTCGATGAATATGAGGTAGACTATGTTTTCCGTACTTTGCCGCAACCAGTAAGATATGAGTCAGATTGGTTTGCACAGTTTGTGAACCGTGTACTTCTCAGTCGATGCCTGGGAAACATTCATAGGTTCTGTCTTCGAACTACTGATATGATGAATGTTTCTCTTATTGATGCTTGGGTTTCCACTGCCATAAAGCATAATGTTGTTGAACTTGTTCTTAGTTTGGGGGGTCCTCGCTTGCCGGATTTTGAGATTCCGAGATGTCTTTTTATGTGCAACACATTGGTTAGTTTGGAGTTGGGTGTGCACAAAAATATTTGTGCCGTTACTCCTCCCTCACATTGTTTCCCCTGTCTCAAGTTGCTACATGTTTCATTTCGGTTTCCTGATTCTCACACAGTGGAGAAGTTATTTCCTTCTTTCCCTGTACTTGAAGATCTTATTATAGATGGAGAACATGAAGATGCGTCAGCTTTCAATCTTGTTATATCTGCACCCAAACTGAAAAGACTGCAAATTAGTTTCATTGTCTGTAAATCTGCTATGATAGCTGCTGCAAGTGATTCTGAGGATTATGAAAATTATGGGTGCCAATTTTTTGTTAGTGCTGATGCTCCAAATCTTGAAGAGTTAGATATCTACTATGATATTCTGGTGAGCTATTCTTTGAAGAATGCCAAATGTCTGAGGAAAGCCGAGATAGGTTTCTTAGATGTGAAAGATCTTGAGAACCTTGATTATTTTCTTGGCCTCTCTGATCGCATATGCCGGCTCTTTGCAGATATTTGTAATGCTAAGTACCTGACAGTTTCGGCTCCAATTTTTGCGGCTCTTGACATTAGATATCACAGTCTGCTGCTGACATTTAGTAATTTGCACCACTTGGAGCTACAGCTTCAAACTTGTCTCTGTTTGCAATCACTGACAACTTTGCTCAAGATATCACCAAATTTGGAACATCTCAAGATATTACCAAAAAGGGAACACCTGTATGTCAATGAGTACAACTATTGTGATGACGACGATGAGGATGAGCCTGAACATGGATGGGATGCACCAGAGTCTGTGCCTGTTTGTTTGATTTCACACCTCAAGACTATTTGCCTATGGGAATTCAAGGGATGTCCAAATGAGGTGGAAGTGGCAAAGTACTTGGTGAAGCATGGCAAGGCTTTGAATAAGGTGACTATTTATAATCACTTCAGTGAAGACGAGGAGATGGAGATACGGTCACCTAGTGCCTTATGGTCGAAATTTTCAAAGTTTCCCAGGGGTTCCAAGACTTGTAAAATTCAATTTCAGACAATCATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

494

Amino Acids

56.64

Weight (kDa)

5.65

Isoelectric Point (pI)

43.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 16 - 55 1e-07 F-box domain
LRR_At5g56370 PF24758 113 - 276 2.2e-11 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 410 - 454 3.6e-13 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1365
AccB1I GGYRCC 1 cut(s) 759
AccI GTMKAC 1 cut(s) 189
AciI CCGC 2 cut(s) 212, 998
AclWI GGATC 1 cut(s) 53
AcsI RAATTY 4 cut(s) 1120, 1283, 1424, 1461
AcuI CTGAAG 1 cut(s) 1357
AdeI CACNNNGTG 2 cut(s) 571, 1409
AfaI GTAC 6 cut(s) 205, 264, 600, 971, 1175, 1322
AfiI CCNNNNNNNGG 1 cut(s) 1214
AflIII ACRYGT 1 cut(s) 538
AjnI CCWGG 2 cut(s) 279, 1439
AjuI GAANNNNNNNTTGG 2 cut(s) 155, 187
AleI CACNNNNGTG 1 cut(s) 1374
AluBI AGCT 5 cut(s) 644, 722, 831, 1060, 1066
AluI AGCT 5 cut(s) 644, 722, 831, 1060, 1066
Alw21I GWGCWC 1 cut(s) 480
Alw26I GTCTC 2 cut(s) 530, 1082
Alw44I GTGCAC 1 cut(s) 476
AlwI GGATC 1 cut(s) 53
AlwNI CAGNNNCTG 1 cut(s) 1235
AoxI GGCC 1 cut(s) 919
ApaLI GTGCAC 1 cut(s) 476
ApeKI GCWGC 3 cut(s) 722, 725, 1027
ApoI RAATTY 4 cut(s) 1120, 1283, 1424, 1461
Asp700I GAANNNNTTC 1 cut(s) 384
AspS9I GGNCC 1 cut(s) 401
AsuHPI GGTGA 5 cut(s) 838, 1107, 1339, 1366, 1395
AsuII TTCGAA 1 cut(s) 307
AvaII GGWCC 1 cut(s) 401
BaeGI GKGCMC 1 cut(s) 480
BanI GGYRCC 1 cut(s) 759
BbsI GAAGAC 2 cut(s) 296, 1386
Bbv12I GWGCWC 1 cut(s) 480
BbvI GCAGC 3 cut(s) 709, 712, 1014
BccI CCATC 4 cut(s) 129, 614, 1212, 1384
BceAI ACGGC 1 cut(s) 479
BciT130I CCWGG 2 cut(s) 281, 1441
BcoDI GTCTC 2 cut(s) 530, 1082
BfaI CTAG 3 cut(s) 117, 167, 1407
BfmI CTRYAG 1 cut(s) 1061
BglII AGATCT 2 cut(s) 607, 892
BisI GCNGC 5 cut(s) 212, 723, 726, 999, 1028
BlsI GCNGC 5 cut(s) 213, 724, 727, 1000, 1029
BmcAI AGTACT 1 cut(s) 1322
Bme1390I CCNGG 2 cut(s) 281, 1441
Bme18I GGWCC 1 cut(s) 401
BmgT120I GGNCC 1 cut(s) 401
BmiI GGNNCC 4 cut(s) 402, 761, 987, 1447
BmrFI CCNGG 2 cut(s) 281, 1441
BmsI GCATC 6 cut(s) 52, 266, 331, 625, 772, 1213
BpiI GAAGAC 2 cut(s) 296, 1386
Bpu14I TTCGAA 1 cut(s) 307
BpuEI CTTGAG 5 cut(s) 512, 917, 1091, 1118, 1247
BsaJI CCNNGG 3 cut(s) 280, 1439, 1440
BsaXI ACNNNNNCTCC 4 cut(s) 68, 98, 1385, 1415
Bsc4I CCNNNNNNNGG 1 cut(s) 1214
Bse118I RCCGGY 1 cut(s) 939
Bse1I ACTGG 1 cut(s) 218
Bse3DI GCAATG 1 cut(s) 40
BseBI CCWGG 2 cut(s) 281, 1441
BseDI CCNNGG 3 cut(s) 280, 1439, 1440
BseGI GGATG 4 cut(s) 1207, 1223, 1228, 1298
BseLI CCNNNNNNNGG 1 cut(s) 1214
BseMI GCAATG 1 cut(s) 40
BseMII CTCAG 3 cut(s) 283, 729, 848
BseNI ACTGG 1 cut(s) 218
BseRI GAGGAG 2 cut(s) 492, 1400
BseSI GKGCMC 1 cut(s) 480
BseXI GCAGC 3 cut(s) 709, 712, 1014
BsgI GTGCAG 1 cut(s) 648
BshFI GGCC 1 cut(s) 921
BshNI GGYRCC 1 cut(s) 759
BsiHKAI GWGCWC 1 cut(s) 480
BsiSI CCGG 2 cut(s) 413, 940
BslI CCNNNNNNNGG 1 cut(s) 1214
BsmAI GTCTC 2 cut(s) 530, 1082
BsmI GAATGC 1 cut(s) 850
BsnI GGCC 1 cut(s) 921
Bsp119I TTCGAA 1 cut(s) 307
Bsp1286I GDGCHC 1 cut(s) 480
Bsp143I GATC 4 cut(s) 45, 607, 892, 928
BspACI CCGC 2 cut(s) 212, 998
BspANI GGCC 1 cut(s) 921
BspCNI CTCAG 3 cut(s) 282, 730, 849
BspLI GGNNCC 4 cut(s) 402, 761, 987, 1447
BspPI GGATC 1 cut(s) 53
BspT104I TTCGAA 1 cut(s) 307
BspT107I GGYRCC 1 cut(s) 759
BsrDI GCAATG 1 cut(s) 40
BsrFI RCCGGY 1 cut(s) 939
BsrI ACTGG 1 cut(s) 218
BssAI RCCGGY 1 cut(s) 939
BssECI CCNNGG 3 cut(s) 280, 1439, 1440
BssMI GATC 4 cut(s) 45, 607, 892, 928
Bst2UI CCWGG 2 cut(s) 281, 1441
Bst4CI ACNGT 6 cut(s) 249, 260, 571, 979, 1022, 1401
Bst6I CTCTTC 2 cut(s) 24, 792
BstBI TTCGAA 1 cut(s) 307
BstC8I GCNNGC 2 cut(s) 410, 941
BstDEI CTNAG 6 cut(s) 269, 389, 738, 857, 880, 966
BstEII GGTNACC 1 cut(s) 1401
BstF5I GGATG 4 cut(s) 1207, 1223, 1228, 1298
BstKTI GATC 4 cut(s) 48, 610, 895, 931
BstMAI GTCTC 2 cut(s) 530, 1082
BstMBI GATC 4 cut(s) 45, 607, 892, 928
BstMWI GCNNNNNNNGC 2 cut(s) 30, 719
BstNI CCWGG 2 cut(s) 281, 1441
BstNSI RCATGY 1 cut(s) 542
BstPI GGTNACC 1 cut(s) 1401
BstSCI CCNGG 2 cut(s) 279, 1439
BstSFI CTRYAG 1 cut(s) 1061
BstSLI GKGCMC 1 cut(s) 480
BstV1I GCAGC 3 cut(s) 709, 712, 1014
BstV2I GAAGAC 2 cut(s) 296, 1386
BstX2I RGATCY 2 cut(s) 607, 892
BstYI RGATCY 2 cut(s) 607, 892
BsuRI GGCC 1 cut(s) 921
BtsCI GGATG 4 cut(s) 1207, 1223, 1228, 1298
BtsI GCAGTG 1 cut(s) 354
BtsIMutI CAGTG 5 cut(s) 55, 354, 576, 1091, 1381
Cac8I GCNNGC 2 cut(s) 410, 941
CaiI CAGNNNCTG 1 cut(s) 1235
Cfr10I RCCGGY 1 cut(s) 939
Cfr13I GGNCC 1 cut(s) 401
CseI GACGC 1 cut(s) 627
Csp6I GTAC 6 cut(s) 204, 263, 599, 970, 1174, 1321
CspCI CAANNNNNGTGG 2 cut(s) 1287, 1322
CviAII CATG 4 cut(s) 539, 629, 1214, 1334
CviQI GTAC 6 cut(s) 204, 263, 599, 970, 1174, 1321
DdeI CTNAG 6 cut(s) 269, 389, 738, 857, 880, 966
DpnI GATC 4 cut(s) 47, 609, 894, 930
DpnII GATC 4 cut(s) 45, 607, 892, 928
DraIII CACNNNGTG 2 cut(s) 571, 1409
Eam1104I CTCTTC 2 cut(s) 24, 792
EarI CTCTTC 2 cut(s) 24, 792
Eco32I GATATC 3 cut(s) 808, 1016, 1113
Eco47I GGWCC 1 cut(s) 401
Eco57I CTGAAG 1 cut(s) 1357
Eco91I GGTNACC 1 cut(s) 1401
EcoO109I RGGNCCY 1 cut(s) 401
EcoO65I GGTNACC 1 cut(s) 1401
EcoRI GAATTC 1 cut(s) 1283
EcoRII CCWGG 2 cut(s) 279, 1439
EcoRV GATATC 3 cut(s) 808, 1016, 1113
FaeI CATG 4 cut(s) 542, 632, 1217, 1337
FatI CATG 4 cut(s) 538, 628, 1213, 1333
FauNDI CATATG 1 cut(s) 935
FblI GTMKAC 1 cut(s) 189
Fnu4HI GCNGC 5 cut(s) 212, 723, 726, 999, 1028
FokI GGATG 4 cut(s) 1214, 1230, 1235, 1305
Fsp4HI GCNGC 5 cut(s) 212, 723, 726, 999, 1028
FspBI CTAG 3 cut(s) 117, 167, 1407
GluI GCNGC 5 cut(s) 212, 723, 726, 999, 1028
HaeIII GGCC 1 cut(s) 921
HapII CCGG 2 cut(s) 413, 940
HgaI GACGC 1 cut(s) 627
Hin1II CATG 4 cut(s) 542, 632, 1217, 1337
HinfI GANTC 5 cut(s) 230, 424, 560, 734, 1232
HpaII CCGG 2 cut(s) 413, 940
HphI GGTGA 5 cut(s) 838, 1107, 1339, 1366, 1395
Hpy166II GTNNAC 4 cut(s) 190, 256, 263, 478
Hpy188I TCNGA 6 cut(s) 235, 429, 739, 858, 928, 1473
Hpy188III TCNNGA 8 cut(s) 167, 557, 794, 896, 1004, 1108, 1135, 1264
Hpy8I GTNNAC 4 cut(s) 190, 256, 263, 478
Hpy99I CGWCG 1 cut(s) 1196
HpyAV CCTTC 2 cut(s) 97, 597
HpyCH4III ACNGT 6 cut(s) 249, 260, 571, 979, 1022, 1401
HpyF10VI GCNNNNNNNGC 2 cut(s) 30, 719
HpyF3I CTNAG 6 cut(s) 269, 389, 738, 857, 880, 966
Hsp92II CATG 4 cut(s) 542, 632, 1217, 1337
KroI GCCGGC 1 cut(s) 939
KroNI GCCGGC 1 cut(s) 941
Kzo9I GATC 4 cut(s) 45, 607, 892, 928
LmnI GCTCC 3 cut(s) 790, 991, 1057
Lsp1109I GCAGC 3 cut(s) 709, 712, 1014
LweI GCATC 6 cut(s) 52, 266, 331, 625, 772, 1213
MaeI CTAG 3 cut(s) 117, 167, 1407
MaeIII GTNAC 3 cut(s) 496, 1354, 1401
MalI GATC 4 cut(s) 47, 609, 894, 930
MboI GATC 4 cut(s) 45, 607, 892, 928
MboII GAAGA 8 cut(s) 11, 151, 296, 617, 644, 809, 853, 1391
MflI RGATCY 2 cut(s) 607, 892
MhlI GDGCHC 1 cut(s) 480
MlyI GAGTC 2 cut(s) 239, 1241
MroNI GCCGGC 1 cut(s) 939
MroXI GAANNNNTTC 1 cut(s) 384
MslI CAYNNNNRTG 4 cut(s) 133, 633, 1161, 1374
MspI CCGG 2 cut(s) 413, 940
MspR9I CCNGG 2 cut(s) 281, 1441
Mva1269I GAATGC 1 cut(s) 850
MvaI CCWGG 2 cut(s) 281, 1441
MwoI GCNNNNNNNGC 2 cut(s) 30, 719
NaeI GCCGGC 1 cut(s) 941
NdeI CATATG 1 cut(s) 935
NdeII GATC 4 cut(s) 45, 607, 892, 928
NgoMIV GCCGGC 1 cut(s) 939
NlaIII CATG 4 cut(s) 542, 632, 1217, 1337
NlaIV GGNNCC 4 cut(s) 402, 761, 987, 1447
NmeAIII GCCGAG 1 cut(s) 892
NmuCI GTSAC 2 cut(s) 1354, 1401
NspI RCATGY 1 cut(s) 542
NspV TTCGAA 1 cut(s) 307
OliI CACNNNNGTG 1 cut(s) 1374
PasI CCCWGGG 1 cut(s) 1440
PciI ACATGT 1 cut(s) 538
PctI GAATGC 1 cut(s) 850
PdiI GCCGGC 1 cut(s) 941
PdmI GAANNNNTTC 1 cut(s) 384
PfeI GAWTC 3 cut(s) 424, 560, 734
PkrI GCNGC 5 cut(s) 213, 724, 727, 1000, 1029
PleI GAGTC 2 cut(s) 238, 1240
PpsI GAGTC 2 cut(s) 238, 1240
PpuMI RGGWCCY 1 cut(s) 401
PscI ACATGT 1 cut(s) 538
PsiI TTATAA 1 cut(s) 1365
Psp5II RGGWCCY 1 cut(s) 401
Psp6I CCWGG 2 cut(s) 279, 1439
PspEI GGTNACC 1 cut(s) 1401
PspGI CCWGG 2 cut(s) 279, 1439
PspN4I GGNNCC 4 cut(s) 402, 761, 987, 1447
PspPI GGNCC 1 cut(s) 401
PspPPI RGGWCCY 1 cut(s) 401
PstNI CAGNNNCTG 1 cut(s) 1235
PsuI RGATCY 2 cut(s) 607, 892
RsaI GTAC 6 cut(s) 205, 264, 600, 971, 1175, 1322
RsaNI GTAC 6 cut(s) 204, 263, 599, 970, 1174, 1321
RseI CAYNNNNRTG 4 cut(s) 133, 633, 1161, 1374
SatI GCNGC 5 cut(s) 212, 723, 726, 999, 1028
Sau3AI GATC 4 cut(s) 45, 607, 892, 928
Sau96I GGNCC 1 cut(s) 401
ScaI AGTACT 1 cut(s) 1322
SchI GAGTC 2 cut(s) 239, 1241
ScrFI CCNGG 2 cut(s) 281, 1441
SduI GDGCHC 1 cut(s) 480
SfaNI GCATC 6 cut(s) 52, 266, 331, 625, 772, 1213
SfcI CTRYAG 1 cut(s) 1061
SfuI TTCGAA 1 cut(s) 307
SinI GGWCC 1 cut(s) 401
SmiMI CAYNNNNRTG 4 cut(s) 133, 633, 1161, 1374
SmlI CTYRAG 5 cut(s) 527, 896, 1106, 1133, 1262
SmoI CTYRAG 5 cut(s) 527, 896, 1106, 1133, 1262
SsiI CCGC 2 cut(s) 212, 998
SspI AATATT 1 cut(s) 487
SspMI CTAG 3 cut(s) 117, 167, 1407
StyD4I CCNGG 2 cut(s) 279, 1439
TaaI ACNGT 6 cut(s) 249, 260, 571, 979, 1022, 1401
TaqI TCGA 4 cut(s) 174, 274, 307, 1421
TatI WGTACW 4 cut(s) 262, 598, 1173, 1320
TauI GCSGC 2 cut(s) 214, 1001
TfiI GAWTC 3 cut(s) 424, 560, 734
TscAI CASTG 5 cut(s) 55, 361, 576, 1098, 1381
TseFI GTSAC 2 cut(s) 1354, 1401
TseI GCWGC 3 cut(s) 722, 725, 1027
Tsp45I GTSAC 2 cut(s) 1354, 1401
TspDTI ATGAA 7 cut(s) 192, 281, 338, 534, 645, 685, 762
TspGWI ACGGA 1 cut(s) 191
TspRI CASTG 5 cut(s) 55, 361, 576, 1098, 1381
VneI GTGCAC 1 cut(s) 476
VpaK11BI GGWCC 1 cut(s) 401
XapI RAATTY 4 cut(s) 1120, 1283, 1424, 1461
XbaI TCTAGA 1 cut(s) 166
XceI RCATGY 1 cut(s) 542
XmiI GTMKAC 1 cut(s) 189
XmnI GAANNNNTTC 1 cut(s) 384
XspI CTAG 3 cut(s) 117, 167, 1407
ZrmI AGTACT 1 cut(s) 1322
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.