Rmu_sc0005482.1_g000005

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005482.1
OG0000079
Physical Location & Seq
Forward (+)
16633 .. 18440
1808 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005482.1_g000005.1.cds

Sequence Viewer

Length: 1362 bp
atggcaaagcctgaagcaagagaccaagataggatcagtaaattaccaaatgaagttgtttattgcatactttccttccttcccacagtagatgctgtcaggaccaccgtgttgtctaaaagatggagcaaaatgtgggcgaagcttaaaactctaaatttctacagcaataaaaaggaatttcgggaccatgaagaggcttttagtttcgtaacatttgtcactcgtgtactcttctttcgtaaagtaccagagatacataaattccgtctaaaaatgccctatccccagtatatacctcatattgaggactgggttttcactgctgttatccgaaatgttgtcgagcttgatcttcatgtttttgaaactggggttgatgtttttgtgttacctgagtgcatttattggtgcaaaacgctgagggttttgaaactccatctgacgccctggacgcgcaccgatgatcctcctgcatccggctgtttcccaagtctcaagtttctccatgtatcagtttataatcctcaggaaacaactatgaatttgcttttctcttgctgccccgtacttgaaggtttgacaatagatggaaccattgatgggaacactggtgatcatgtgaattacaatttcaaggtctctgcactggaactgaagacattgaggataagtttggaaaatatatatgagcctgtcgatgttcatattaacgcccctaagcttgaaaacctcgatctgaagcgtcttggtttgaccaactgttttcttattgggagtgcaaaatccctagtcaatgccagtattgctttcagagaacactttgaagtagacaaaaagcttgatctttccacctttgcaatggcgcttgtggatcgaatttctaatgttaaatttctatctctttcagctcattgcttggaggacttgcatctccctgaggattggcatctccctgtttttcataatgtgaaccaattgaggctggctttttgggatcacaatttgttggaattgttagctgtttttctcaatagtgcacctactctggaagatcttgtcttagaagatagaactgaaggttacacagaactgtcagagagccactggaatccaccagaggaggtgcctgctggtttatcatcaaacctgaagaccatctcctttaagggattcaagggaaggctgtttgagatggaaatgataaagtatctgttgaagaatggtcaactgttgaataagatgacgatttctacaagtctgcatctttcgtatgatagacagaatgagttatacacagagtttatgatgttccataggacagcaacttgtcatgttgagtttgtgcacatgcaagtttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

453

Amino Acids

52.5

Weight (kDa)

6.18

Isoelectric Point (pI)

36.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 522
AccB1I GGYRCC 1 cut(s) 1126
AccI GTMKAC 1 cut(s) 831
AccII CGCG 1 cut(s) 457
AclWI GGATC 4 cut(s) 41, 461, 882, 1005
AcsI RAATTY 6 cut(s) 157, 179, 263, 544, 879, 893
AcuI CTGAAG 5 cut(s) 33, 677, 761, 1098, 1172
AcyI GRCGYC 1 cut(s) 446
AfaI GTAC 3 cut(s) 231, 249, 570
AfiI CCNNNNNNNGG 3 cut(s) 196, 479, 603
AgsI TTSAA 9 cut(s) 368, 433, 575, 637, 728, 827, 1177, 1219, 1237
AjnI CCWGG 1 cut(s) 449
AluBI AGCT 6 cut(s) 145, 349, 724, 841, 911, 1022
AluI AGCT 6 cut(s) 145, 349, 724, 841, 911, 1022
Alw21I GWGCWC 2 cut(s) 1042, 1350
Alw26I GTCTC 3 cut(s) 15, 500, 646
Alw44I GTGCAC 2 cut(s) 1038, 1346
AlwI GGATC 4 cut(s) 41, 461, 882, 1005
ApaLI GTGCAC 2 cut(s) 1038, 1346
ApeKI GCWGC 1 cut(s) 561
ApoI RAATTY 6 cut(s) 157, 179, 263, 544, 879, 893
AspLEI GCGC 2 cut(s) 459, 868
AspS9I GGNCC 2 cut(s) 102, 187
AsuHPI GGTGA 1 cut(s) 626
AvaII GGWCC 2 cut(s) 102, 187
AxyI CCTNAGG 2 cut(s) 528, 939
BaeGI GKGCMC 2 cut(s) 1042, 1350
BanI GGYRCC 1 cut(s) 1126
BauI CACGAG 1 cut(s) 225
BbsI GAAGAC 2 cut(s) 665, 1160
Bbv12I GWGCWC 2 cut(s) 1042, 1350
BbvCI CCTCAGC 1 cut(s) 422
BbvI GCAGC 1 cut(s) 548
BccI CCATC 6 cut(s) 117, 447, 584, 596, 1166, 1189
BciT130I CCWGG 1 cut(s) 451
BclI TGATCA 1 cut(s) 616
BcoDI GTCTC 3 cut(s) 15, 500, 646
BfaI CTAG 1 cut(s) 791
BfmI CTRYAG 1 cut(s) 163
BfoI RGCGCY 1 cut(s) 869
BglII AGATCT 1 cut(s) 1054
BisI GCNGC 1 cut(s) 562
BlsI GCNGC 1 cut(s) 563
Bme1390I CCNGG 1 cut(s) 451
Bme18I GGWCC 2 cut(s) 102, 187
BmgT120I GGNCC 2 cut(s) 102, 187
BmiI GGNNCC 3 cut(s) 188, 595, 1128
BmrFI CCNGG 1 cut(s) 451
BmrI ACTGGG 3 cut(s) 283, 322, 381
BmsI GCATC 5 cut(s) 82, 485, 940, 958, 1273
BmuI ACTGGG 3 cut(s) 283, 322, 381
BpiI GAAGAC 2 cut(s) 665, 1160
Bpu10I CCTNAGC 2 cut(s) 422, 720
BpuEI CTTGAG 1 cut(s) 482
BsaBI GATNNNNATC 1 cut(s) 948
BsaHI GRCGYC 1 cut(s) 446
BsaI GGTCTC 2 cut(s) 15, 646
BsaJI CCNNGG 1 cut(s) 449
Bsc4I CCNNNNNNNGG 3 cut(s) 196, 479, 603
Bse1I ACTGG 7 cut(s) 289, 317, 376, 616, 654, 801, 1112
Bse21I CCTNAGG 2 cut(s) 528, 939
Bse3DI GCAATG 2 cut(s) 867, 913
Bse8I GATNNNNATC 1 cut(s) 948
BseBI CCWGG 1 cut(s) 451
BseDI CCNNGG 1 cut(s) 449
BseGI GGATG 1 cut(s) 476
BseJI GATNNNNATC 1 cut(s) 948
BseLI CCNNNNNNNGG 3 cut(s) 196, 479, 603
BseMI GCAATG 2 cut(s) 867, 913
BseMII CTCAG 4 cut(s) 387, 413, 542, 930
BseNI ACTGG 7 cut(s) 289, 317, 376, 616, 654, 801, 1112
BseRI GAGGAG 1 cut(s) 1136
BseSI GKGCMC 2 cut(s) 1042, 1350
BseXI GCAGC 1 cut(s) 548
BsgI GTGCAG 1 cut(s) 630
Bsh1236I CGCG 1 cut(s) 457
BshNI GGYRCC 1 cut(s) 1126
BsiHKAI GWGCWC 2 cut(s) 1042, 1350
BsiSI CCGG 1 cut(s) 480
BslFI GGGAC 1 cut(s) 200
BslI CCNNNNNNNGG 3 cut(s) 196, 479, 603
BsmAI GTCTC 3 cut(s) 15, 500, 646
BsmFI GGGAC 1 cut(s) 200
Bso31I GGTCTC 2 cut(s) 15, 646
Bsp1286I GDGCHC 2 cut(s) 1042, 1350
Bsp143I GATC 9 cut(s) 33, 352, 466, 616, 736, 844, 874, 997, 1054
BspCNI CTCAG 4 cut(s) 388, 414, 541, 931
BspFNI CGCG 1 cut(s) 457
BspLI GGNNCC 3 cut(s) 188, 595, 1128
BspPI GGATC 4 cut(s) 41, 461, 882, 1005
BspT107I GGYRCC 1 cut(s) 1126
BspTNI GGTCTC 2 cut(s) 15, 646
BsrDI GCAATG 2 cut(s) 867, 913
BsrI ACTGG 7 cut(s) 289, 317, 376, 616, 654, 801, 1112
BssECI CCNNGG 1 cut(s) 449
BssMI GATC 9 cut(s) 33, 352, 466, 616, 736, 844, 874, 997, 1054
BssNI GRCGYC 1 cut(s) 446
BssSI CACGAG 1 cut(s) 225
Bst2BI CACGAG 1 cut(s) 225
Bst2UI CCWGG 1 cut(s) 451
Bst4CI ACNGT 5 cut(s) 88, 109, 764, 1095, 1233
Bst6I CTCTTC 2 cut(s) 189, 239
BstACI GRCGYC 1 cut(s) 446
BstC8I GCNNGC 2 cut(s) 987, 1131
BstDEI CTNAG 6 cut(s) 396, 422, 528, 720, 939, 1063
BstF5I GGATG 1 cut(s) 476
BstFNI CGCG 1 cut(s) 457
BstH2I RGCGCY 1 cut(s) 869
BstHHI GCGC 2 cut(s) 459, 868
BstKTI GATC 9 cut(s) 36, 355, 469, 619, 739, 847, 877, 1000, 1057
BstMAI GTCTC 3 cut(s) 15, 500, 646
BstMBI GATC 9 cut(s) 33, 352, 466, 616, 736, 844, 874, 997, 1054
BstMWI GCNNNNNNNGC 2 cut(s) 454, 806
BstNI CCWGG 1 cut(s) 451
BstNSI RCATGY 1 cut(s) 1354
BstSCI CCNGG 1 cut(s) 449
BstSFI CTRYAG 1 cut(s) 163
BstSLI GKGCMC 2 cut(s) 1042, 1350
BstUI CGCG 1 cut(s) 457
BstV1I GCAGC 1 cut(s) 548
BstV2I GAAGAC 2 cut(s) 665, 1160
BstX2I RGATCY 1 cut(s) 1054
BstYI RGATCY 1 cut(s) 1054
Bsu36I CCTNAGG 2 cut(s) 528, 939
BtsCI GGATG 1 cut(s) 476
BtsI GCAGTG 1 cut(s) 321
BtsIMutI CAGTG 4 cut(s) 321, 609, 647, 1105
Cac8I GCNNGC 2 cut(s) 987, 1131
CfoI GCGC 2 cut(s) 459, 868
Cfr13I GGNCC 2 cut(s) 102, 187
CseI GACGC 3 cut(s) 454, 463, 734
Csp6I GTAC 3 cut(s) 230, 248, 569
CviAII CATG 6 cut(s) 191, 359, 509, 620, 1334, 1351
CviQI GTAC 3 cut(s) 230, 248, 569
DdeI CTNAG 6 cut(s) 396, 422, 528, 720, 939, 1063
DpnI GATC 9 cut(s) 35, 354, 468, 618, 738, 846, 876, 999, 1056
DpnII GATC 9 cut(s) 33, 352, 466, 616, 736, 844, 874, 997, 1054
Eam1104I CTCTTC 2 cut(s) 189, 239
EarI CTCTTC 2 cut(s) 189, 239
Eco31I GGTCTC 2 cut(s) 15, 646
Eco47I GGWCC 2 cut(s) 102, 187
Eco57I CTGAAG 5 cut(s) 33, 677, 761, 1098, 1172
Eco81I CCTNAGG 2 cut(s) 528, 939
EcoRII CCWGG 1 cut(s) 449
FaeI CATG 6 cut(s) 194, 362, 512, 623, 1337, 1354
FaqI GGGAC 1 cut(s) 200
FatI CATG 6 cut(s) 190, 358, 508, 619, 1333, 1350
FbaI TGATCA 1 cut(s) 616
FblI GTMKAC 1 cut(s) 831
Fnu4HI GCNGC 1 cut(s) 562
FokI GGATG 1 cut(s) 463
Fsp4HI GCNGC 1 cut(s) 562
FspBI CTAG 1 cut(s) 791
GlaI GCGC 2 cut(s) 458, 867
GluI GCNGC 1 cut(s) 562
HaeII RGCGCY 1 cut(s) 869
HapII CCGG 1 cut(s) 480
HgaI GACGC 3 cut(s) 454, 463, 734
HhaI GCGC 2 cut(s) 459, 868
Hin1I GRCGYC 1 cut(s) 446
Hin1II CATG 6 cut(s) 194, 362, 512, 623, 1337, 1354
Hin6I GCGC 2 cut(s) 457, 866
HinP1I GCGC 2 cut(s) 457, 866
HincII GTYRAC 1 cut(s) 1229
HindII GTYRAC 1 cut(s) 1229
HindIII AAGCTT 3 cut(s) 143, 722, 839
HinfI GANTC 2 cut(s) 1111, 1173
HpaII CCGG 1 cut(s) 480
HphI GGTGA 1 cut(s) 626
Hpy166II GTNNAC 6 cut(s) 230, 832, 973, 1040, 1229, 1348
Hpy188I TCNGA 5 cut(s) 335, 444, 741, 815, 1099
Hpy188III TCNNGA 4 cut(s) 100, 185, 530, 1049
Hpy8I GTNNAC 6 cut(s) 230, 832, 973, 1040, 1229, 1348
HpyAV CCTTC 5 cut(s) 85, 89, 569, 1073, 1176
HpyCH4III ACNGT 5 cut(s) 88, 109, 764, 1095, 1233
HpyF10VI GCNNNNNNNGC 2 cut(s) 454, 806
HpyF3I CTNAG 6 cut(s) 396, 422, 528, 720, 939, 1063
Hsp92I GRCGYC 1 cut(s) 446
Hsp92II CATG 6 cut(s) 194, 362, 512, 623, 1337, 1354
HspAI GCGC 2 cut(s) 457, 866
Ksp22I TGATCA 1 cut(s) 616
Kzo9I GATC 9 cut(s) 33, 352, 466, 616, 736, 844, 874, 997, 1054
LmnI GCTCC 1 cut(s) 126
Lsp1109I GCAGC 1 cut(s) 548
LweI GCATC 5 cut(s) 82, 485, 940, 958, 1273
MaeI CTAG 1 cut(s) 791
MaeIII GTNAC 4 cut(s) 211, 220, 390, 1082
MalI GATC 9 cut(s) 35, 354, 468, 618, 738, 846, 876, 999, 1056
MboI GATC 9 cut(s) 33, 352, 466, 616, 736, 844, 874, 997, 1054
MboII GAAGA 8 cut(s) 206, 226, 347, 670, 1064, 1079, 1165, 1231
MfeI CAATTG 1 cut(s) 977
MflI RGATCY 1 cut(s) 1054
MhlI GDGCHC 2 cut(s) 1042, 1350
MmeI TCCRAC 1 cut(s) 990
MseI TTAA 4 cut(s) 147, 711, 891, 1167
MspI CCGG 1 cut(s) 480
MspR9I CCNGG 1 cut(s) 451
MunI CAATTG 1 cut(s) 977
MvaI CCWGG 1 cut(s) 451
MvnI CGCG 1 cut(s) 457
MwoI GCNNNNNNNGC 2 cut(s) 454, 806
NdeII GATC 9 cut(s) 33, 352, 466, 616, 736, 844, 874, 997, 1054
NlaIII CATG 6 cut(s) 194, 362, 512, 623, 1337, 1354
NlaIV GGNNCC 3 cut(s) 188, 595, 1128
NmuCI GTSAC 1 cut(s) 220
NspI RCATGY 1 cut(s) 1354
PfeI GAWTC 2 cut(s) 1111, 1173
PkrI GCNGC 1 cut(s) 563
PsiI TTATAA 1 cut(s) 522
Psp6I CCWGG 1 cut(s) 449
PspGI CCWGG 1 cut(s) 449
PspN4I GGNNCC 3 cut(s) 188, 595, 1128
PspPI GGNCC 2 cut(s) 102, 187
PsuI RGATCY 1 cut(s) 1054
RsaI GTAC 3 cut(s) 231, 249, 570
RsaNI GTAC 3 cut(s) 230, 248, 569
SaqAI TTAA 4 cut(s) 147, 711, 891, 1167
SatI GCNGC 1 cut(s) 562
Sau3AI GATC 9 cut(s) 33, 352, 466, 616, 736, 844, 874, 997, 1054
Sau96I GGNCC 2 cut(s) 102, 187
ScrFI CCNGG 1 cut(s) 451
SduI GDGCHC 2 cut(s) 1042, 1350
SfaNI GCATC 5 cut(s) 82, 485, 940, 958, 1273
SfcI CTRYAG 1 cut(s) 163
SinI GGWCC 2 cut(s) 102, 187
SmlI CTYRAG 1 cut(s) 497
SmoI CTYRAG 1 cut(s) 497
SspMI CTAG 1 cut(s) 791
StyD4I CCNGG 1 cut(s) 449
TaaI ACNGT 5 cut(s) 88, 109, 764, 1095, 1233
TaqI TCGA 4 cut(s) 345, 699, 735, 877
TatI WGTACW 1 cut(s) 229
TfiI GAWTC 2 cut(s) 1111, 1173
Tru1I TTAA 4 cut(s) 147, 711, 891, 1167
Tru9I TTAA 4 cut(s) 147, 711, 891, 1167
TscAI CASTG 4 cut(s) 328, 616, 654, 1112
TseFI GTSAC 1 cut(s) 220
TseI GCWGC 1 cut(s) 561
Tsp45I GTSAC 1 cut(s) 220
TspDTI ATGAA 6 cut(s) 66, 207, 347, 557, 695, 953
TspGWI ACGGA 1 cut(s) 257
TspRI CASTG 4 cut(s) 328, 616, 654, 1112
VneI GTGCAC 2 cut(s) 1038, 1346
VpaK11BI GGWCC 2 cut(s) 102, 187
XapI RAATTY 6 cut(s) 157, 179, 263, 544, 879, 893
XceI RCATGY 1 cut(s) 1354
XcmI CCANNNNNNNNNTGG 1 cut(s) 859
XmiI GTMKAC 1 cut(s) 831
XspI CTAG 1 cut(s) 791
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.