Rh5DG374300

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0000079
Physical Location & Seq
Reverse (-)
56836794 .. 56842230
5437 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG374300.1

Sequence Viewer

Length: 1383 bp
ATGGGATCAGTGGCAAAGGCTGCAGAAACAGACCATGATATGATCAGTAAATTGCCACCTGACATAATTGAACACATATTCTCTTTCCTTCCGACGGTGGATGCTGTCCGAGCTAGCACTTTATCTAAAACCTATGCCAAGGTGTGGAAAGATCTTACAACTCTCAACTTTAACACCGAAGGGGACTTTTGGGAGGATGGAGATGTGGAAGCTCGTGCAACGTTTATATCTCGTGTGCTCTTATTTCGGTCTGCATCAGATATACATACATTCCGTTTAAAACTGTCTTCTTCACAGAGCTATTTACCAATTATCGGTGACTGCATACGTGCTGCTGTGAGGCACAGTGTAAAACAGCTTGATCTTCATTTGTCATTTTATGATCTTGACTTGCCTCCTTGCATCTTTTGGTGCAAATCCCTGGAGGTTTTAAAACTGAGTATGCTTTATTGGGGTGTGACAAGCATAAAGTCGGAATCAACCTGGTTTCCCTGTCTTAAATTCCTGCAACTAAGAGTGGATCTTCCAGATATGCAAGAATTGAAGAAGTTCTTGGCATTTTTTCCTGTTCTTGAAACAATGATTCTTGATGGACCCCTTGATGGATACGGGCATGATAGGTTCGCTGACCCAGACAATTCCCAGATTTTTAGTTTGCAGGTCTCTGCACCGAAACTGAAGACATTGGTTTTAAGCTTGGTATCCCGGTTTCAGCCTGTTGACATATATGTACTTGCCCCAAAGCTTGAAACAATTGATCTCGTCGAGCTTGGTTTAACCACCTGTTCTCTTGATGAAAGTGCAAAGTCCCTGATCAGTGCCAGTATCACTTTCCTGGAACAAACTGAAATTGAAGGATTCTTCAATTCTTCCAGCACTACAGTGGATCTTCTGAGTCGAGTTTCTGATGTTAGAACTCTCTCGATTTCGGCTCACTACTGGCAGGATTTGCTTCTCCCTGAGGATTGGCTTCCCCCTCTGTTTCATAATGTGATCCAATTGAGGCTGGCTATTGGGGATCTCAGTCGCTGGGAATTGCTTGCTATTTTTCTCAACAGTGCACCCAGTCTCGAAGTTCTTGTCTTAGAATATAGACCTGAAGGTCACACAGAATTCGCAGAGCTTCACTGGAATGCACCCAGTAATGTGCCTACTTGTTTAACATCTCATCTAAAGACTATCTCCGTGAAGGGATTGAAGGGATTACCGGTTGAGATGGAAATCCTCGGGTATCTGTTGAAGAATGGTCATCTGCTGAATAAGGTGTTGATTTTTACAAGTCTTCGTCTTGTGCTTCAGGAACATGAGGAGCTACGTGGAGAGGTTTTGAGGTTCGATAAAGCGACAACGTGCCATTTAGAGTTTATGCAGATGGAAGTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

460

Amino Acids

52.11

Weight (kDa)

5.23

Isoelectric Point (pI)

40.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 15 - 52 5.3e-08 F-box domain
LRR_At5g56370 PF24758 109 - 262 1.7e-06 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 380 - 424 2.2e-11 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1101
Acc36I ACCTGC 1 cut(s) 649
AccB7I CCANNNNNTGG 1 cut(s) 144
AclI AACGTT 1 cut(s) 221
AclWI GGATC 5 cut(s) 13, 528, 894, 988, 1026
AcsI RAATTY 2 cut(s) 500, 1112
AcuI CTGAAG 3 cut(s) 698, 1119, 1280
AfaI GTAC 1 cut(s) 732
AfiI CCNNNNNNNGG 4 cut(s) 94, 144, 314, 602
AgeI ACCGGT 1 cut(s) 1207
AgsI TTSAA 8 cut(s) 71, 544, 575, 749, 854, 865, 1198, 1240
AjnI CCWGG 3 cut(s) 420, 482, 834
AjuI GAANNNNNNNTTGG 2 cut(s) 536, 568
AleI CACNNNNGTG 1 cut(s) 881
AluBI AGCT 9 cut(s) 113, 212, 300, 358, 696, 745, 769, 1123, 1312
AluI AGCT 9 cut(s) 113, 212, 300, 358, 696, 745, 769, 1123, 1312
Alw21I GWGCWC 2 cut(s) 240, 1063
Alw26I GTCTC 2 cut(s) 667, 1073
Alw44I GTGCAC 1 cut(s) 1059
AlwI GGATC 5 cut(s) 13, 528, 894, 988, 1026
AlwNI CAGNNNCTG 1 cut(s) 1029
Ama87I CYCGRG 1 cut(s) 1226
ApaLI GTGCAC 1 cut(s) 1059
ApeKI GCWGC 2 cut(s) 20, 332
ApoI RAATTY 2 cut(s) 500, 1112
ArsI GACNNNNNNTTYG 2 cut(s) 1065, 1097
AsiGI ACCGGT 1 cut(s) 1207
Asp700I GAANNNNTTC 1 cut(s) 548
AspS9I GGNCC 1 cut(s) 593
AsuC2I CCSGG 1 cut(s) 706
AsuHPI GGTGA 1 cut(s) 329
AsuNHI GCTAGC 1 cut(s) 113
AvaI CYCGRG 1 cut(s) 1226
AvaII GGWCC 1 cut(s) 593
AxyI CCTNAGG 1 cut(s) 960
BaeGI GKGCMC 1 cut(s) 1063
BauI CACGAG 2 cut(s) 213, 231
BbsI GAAGAC 3 cut(s) 279, 686, 1274
Bbv12I GWGCWC 2 cut(s) 240, 1063
BbvI GCAGC 2 cut(s) 7, 319
BccI CCATC 5 cut(s) 191, 584, 596, 1210, 1366
BciT130I CCWGG 3 cut(s) 422, 484, 836
BciVI GTATCC 2 cut(s) 599, 712
BclI TGATCA 2 cut(s) 42, 813
BcnI CCSGG 1 cut(s) 706
BcoDI GTCTC 2 cut(s) 667, 1073
BfaI CTAG 2 cut(s) 114, 1381
BfmI CTRYAG 2 cut(s) 21, 879
BfuAI ACCTGC 1 cut(s) 649
BfuI GTATCC 2 cut(s) 599, 712
BglII AGATCT 1 cut(s) 151
BisI GCNGC 2 cut(s) 21, 333
BlsI GCNGC 2 cut(s) 22, 334
Bme1390I CCNGG 4 cut(s) 422, 484, 706, 836
Bme18I GGWCC 1 cut(s) 593
BmeT110I CYCGRG 1 cut(s) 1226
BmgT120I GGNCC 1 cut(s) 593
BmiI GGNNCC 1 cut(s) 595
BmrFI CCNGG 4 cut(s) 422, 484, 706, 836
BmrI ACTGGG 2 cut(s) 1059, 1134
BmsI GCATC 3 cut(s) 91, 263, 411
BmtI GCTAGC 1 cut(s) 117
BmuI ACTGGG 2 cut(s) 1059, 1134
BpiI GAAGAC 3 cut(s) 279, 686, 1274
BpmI CTGGAG 1 cut(s) 443
BpuMI CCSGG 1 cut(s) 706
BsaAI YACGTR 2 cut(s) 329, 1316
BsaBI GATNNNNATC 1 cut(s) 1220
BsaI GGTCTC 1 cut(s) 667
BsaJI CCNNGG 3 cut(s) 138, 420, 1225
BsaWI WCCGGW 1 cut(s) 1207
Bsc4I CCNNNNNNNGG 4 cut(s) 94, 144, 314, 602
Bse118I RCCGGY 1 cut(s) 1207
Bse1I ACTGG 5 cut(s) 822, 944, 1065, 1133, 1140
Bse21I CCTNAGG 1 cut(s) 960
Bse8I GATNNNNATC 1 cut(s) 1220
BseBI CCWGG 3 cut(s) 422, 484, 836
BseDI CCNNGG 3 cut(s) 138, 420, 1225
BseGI GGATG 2 cut(s) 106, 202
BseJI GATNNNNATC 1 cut(s) 1220
BseLI CCNNNNNNNGG 4 cut(s) 94, 144, 314, 602
BseMII CTCAG 4 cut(s) 428, 884, 951, 1036
BseNI ACTGG 5 cut(s) 822, 944, 1065, 1133, 1140
BseRI GAGGAG 1 cut(s) 1322
BseSI GKGCMC 1 cut(s) 1063
BseXI GCAGC 2 cut(s) 7, 319
BseYI CCCAGC 1 cut(s) 1029
BsgI GTGCAG 1 cut(s) 651
BshTI ACCGGT 1 cut(s) 1207
BsiHKAI GWGCWC 2 cut(s) 240, 1063
BsiHKCI CYCGRG 1 cut(s) 1226
BsiSI CCGG 2 cut(s) 706, 1208
BslFI GGGAC 2 cut(s) 197, 793
BslI CCNNNNNNNGG 4 cut(s) 94, 144, 314, 602
BsmAI GTCTC 2 cut(s) 667, 1073
BsmFI GGGAC 2 cut(s) 197, 793
BsmI GAATGC 1 cut(s) 1138
Bso31I GGTCTC 1 cut(s) 667
BsoBI CYCGRG 1 cut(s) 1226
Bsp1286I GDGCHC 2 cut(s) 240, 1063
BspCNI CTCAG 4 cut(s) 429, 885, 952, 1035
BspLI GGNNCC 1 cut(s) 595
BspMAI CTGCAG 1 cut(s) 25
BspMI ACCTGC 1 cut(s) 649
BspOI GCTAGC 1 cut(s) 117
BspPI GGATC 5 cut(s) 13, 528, 894, 988, 1026
BspTNI GGTCTC 1 cut(s) 667
BsrFI RCCGGY 1 cut(s) 1207
BsrI ACTGG 5 cut(s) 822, 944, 1065, 1133, 1140
BssAI RCCGGY 1 cut(s) 1207
BssECI CCNNGG 3 cut(s) 138, 420, 1225
BssSI CACGAG 2 cut(s) 213, 231
BssT1I CCWWGG 1 cut(s) 138
Bst2BI CACGAG 2 cut(s) 213, 231
Bst2UI CCWGG 3 cut(s) 422, 484, 836
Bst4CI ACNGT 5 cut(s) 97, 285, 347, 883, 1058
BstAPI GCANNNNNTGC 2 cut(s) 20, 949
BstBAI YACGTR 2 cut(s) 329, 1316
BstC8I GCNNGC 3 cut(s) 115, 1008, 1041
BstDEI CTNAG 6 cut(s) 437, 512, 893, 960, 1022, 1084
BstF5I GGATG 2 cut(s) 106, 202
BstMAI GTCTC 2 cut(s) 667, 1073
BstMWI GCNNNNNNNGC 3 cut(s) 20, 110, 949
BstNI CCWGG 3 cut(s) 422, 484, 836
BstSCI CCNGG 4 cut(s) 420, 482, 704, 834
BstSFI CTRYAG 2 cut(s) 21, 879
BstSLI GKGCMC 1 cut(s) 1063
BstV1I GCAGC 2 cut(s) 7, 319
BstV2I GAAGAC 3 cut(s) 279, 686, 1274
BstX2I RGATCY 4 cut(s) 151, 520, 886, 1018
BstYI RGATCY 4 cut(s) 151, 520, 886, 1018
Bsu36I CCTNAGG 1 cut(s) 960
BsuI GTATCC 2 cut(s) 599, 712
BtsCI GGATG 2 cut(s) 106, 202
BtsIMutI CAGTG 6 cut(s) 15, 352, 823, 888, 1063, 1126
BveI ACCTGC 1 cut(s) 649
Cac8I GCNNGC 3 cut(s) 115, 1008, 1041
CaiI CAGNNNCTG 1 cut(s) 1029
Cfr10I RCCGGY 1 cut(s) 1207
Cfr13I GGNCC 1 cut(s) 593
CsiI ACCWGGT 1 cut(s) 482
Csp6I GTAC 1 cut(s) 731
CspAI ACCGGT 1 cut(s) 1207
CviAII CATG 3 cut(s) 35, 614, 1304
CviQI GTAC 1 cut(s) 731
DdeI CTNAG 6 cut(s) 437, 512, 893, 960, 1022, 1084
DraI TTTAAA 2 cut(s) 279, 432
DrdI GACNNNNNNGTC 1 cut(s) 1101
DseDI GACNNNNNNGTC 1 cut(s) 1101
Eco130I CCWWGG 1 cut(s) 138
Eco31I GGTCTC 1 cut(s) 667
Eco47I GGWCC 1 cut(s) 593
Eco57I CTGAAG 3 cut(s) 698, 1119, 1280
Eco81I CCTNAGG 1 cut(s) 960
Eco88I CYCGRG 1 cut(s) 1226
EcoRI GAATTC 1 cut(s) 1112
EcoRII CCWGG 3 cut(s) 420, 482, 834
EcoT14I CCWWGG 1 cut(s) 138
ErhI CCWWGG 1 cut(s) 138
FaeI CATG 3 cut(s) 38, 617, 1307
FalI AAGNNNNNCTT 2 cut(s) 536, 568
FaqI GGGAC 2 cut(s) 197, 793
FatI CATG 3 cut(s) 34, 613, 1303
FbaI TGATCA 2 cut(s) 42, 813
Fnu4HI GCNGC 2 cut(s) 21, 333
FokI GGATG 2 cut(s) 113, 209
Fsp4HI GCNGC 2 cut(s) 21, 333
FspBI CTAG 2 cut(s) 114, 1381
GluI GCNGC 2 cut(s) 21, 333
GsaI CCCAGC 1 cut(s) 1033
GsuI CTGGAG 1 cut(s) 443
HapII CCGG 2 cut(s) 706, 1208
Hin1II CATG 3 cut(s) 38, 617, 1307
HincII GTYRAC 1 cut(s) 721
HindII GTYRAC 1 cut(s) 721
HindIII AAGCTT 2 cut(s) 694, 743
HinfI GANTC 4 cut(s) 476, 583, 858, 895
HpaII CCGG 2 cut(s) 706, 1208
HphI GGTGA 1 cut(s) 329
Hpy166II GTNNAC 2 cut(s) 721, 1061
Hpy188I TCNGA 6 cut(s) 93, 110, 259, 475, 894, 907
Hpy188III TCNNGA 8 cut(s) 386, 527, 572, 587, 791, 922, 1070, 1298
Hpy8I GTNNAC 2 cut(s) 721, 1061
Hpy99I CGWCG 2 cut(s) 97, 767
HpyAV CCTTC 6 cut(s) 98, 173, 848, 1094, 1183, 1192
HpyCH4III ACNGT 5 cut(s) 97, 285, 347, 883, 1058
HpyCH4IV ACGT 4 cut(s) 221, 328, 1315, 1349
HpyF10VI GCNNNNNNNGC 3 cut(s) 20, 110, 949
HpyF3I CTNAG 6 cut(s) 437, 512, 893, 960, 1022, 1084
HpySE526I ACGT 4 cut(s) 221, 328, 1315, 1349
Hsp92II CATG 3 cut(s) 38, 617, 1307
Ksp22I TGATCA 2 cut(s) 42, 813
LmnI GCTCC 1 cut(s) 1309
Lsp1109I GCAGC 2 cut(s) 7, 319
LweI GCATC 3 cut(s) 91, 263, 411
MabI ACCWGGT 1 cut(s) 482
MaeI CTAG 2 cut(s) 114, 1381
MaeII ACGT 4 cut(s) 221, 328, 1315, 1349
MaeIII GTNAC 3 cut(s) 317, 457, 1103
MfeI CAATTG 2 cut(s) 753, 998
MflI RGATCY 4 cut(s) 151, 520, 886, 1018
MhlI GDGCHC 2 cut(s) 240, 1063
MlyI GAGTC 1 cut(s) 904
MmeI TCCRAC 2 cut(s) 116, 453
MroXI GAANNNNTTC 1 cut(s) 548
MseI TTAA 7 cut(s) 171, 278, 431, 498, 692, 776, 1160
MslI CAYNNNNRTG 2 cut(s) 881, 1131
MspI CCGG 2 cut(s) 706, 1208
MspR9I CCNGG 4 cut(s) 422, 484, 706, 836
MunI CAATTG 2 cut(s) 753, 998
Mva1269I GAATGC 1 cut(s) 1138
MvaI CCWGG 3 cut(s) 422, 484, 836
MwoI GCNNNNNNNGC 3 cut(s) 20, 110, 949
NciI CCSGG 1 cut(s) 706
NheI GCTAGC 1 cut(s) 113
NlaIII CATG 3 cut(s) 38, 617, 1307
NlaIV GGNNCC 1 cut(s) 595
NmuCI GTSAC 3 cut(s) 317, 457, 1103
OliI CACNNNNGTG 1 cut(s) 881
PctI GAATGC 1 cut(s) 1138
PdmI GAANNNNTTC 1 cut(s) 548
PfeI GAWTC 3 cut(s) 476, 583, 858
PflMI CCANNNNNTGG 1 cut(s) 144
PfoI TCCNGGA 1 cut(s) 834
PinAI ACCGGT 1 cut(s) 1207
PkrI GCNGC 2 cut(s) 22, 334
PleI GAGTC 1 cut(s) 903
PpsI GAGTC 1 cut(s) 903
Ppu21I YACGTR 2 cut(s) 329, 1316
Psp1406I AACGTT 1 cut(s) 221
Psp6I CCWGG 3 cut(s) 420, 482, 834
PspFI CCCAGC 1 cut(s) 1029
PspGI CCWGG 3 cut(s) 420, 482, 834
PspN4I GGNNCC 1 cut(s) 595
PspPI GGNCC 1 cut(s) 593
PstI CTGCAG 1 cut(s) 25
PstNI CAGNNNCTG 1 cut(s) 1029
PsuI RGATCY 4 cut(s) 151, 520, 886, 1018
RsaI GTAC 1 cut(s) 732
RsaNI GTAC 1 cut(s) 731
RseI CAYNNNNRTG 2 cut(s) 881, 1131
SaqAI TTAA 7 cut(s) 171, 278, 431, 498, 692, 776, 1160
SatI GCNGC 2 cut(s) 21, 333
Sau96I GGNCC 1 cut(s) 593
SchI GAGTC 1 cut(s) 904
ScrFI CCNGG 4 cut(s) 422, 484, 706, 836
SduI GDGCHC 2 cut(s) 240, 1063
SexAI ACCWGGT 1 cut(s) 482
SfaNI GCATC 3 cut(s) 91, 263, 411
SfcI CTRYAG 2 cut(s) 21, 879
SinI GGWCC 1 cut(s) 593
SmiMI CAYNNNNRTG 2 cut(s) 881, 1131
SspMI CTAG 2 cut(s) 114, 1381
StyD4I CCNGG 4 cut(s) 420, 482, 704, 834
StyI CCWWGG 1 cut(s) 138
TaaI ACNGT 5 cut(s) 97, 285, 347, 883, 1058
TaiI ACGT 4 cut(s) 224, 331, 1318, 1352
TaqI TCGA 5 cut(s) 765, 898, 923, 1071, 1335
TaqII GACCGA 1 cut(s) 237
TatI WGTACW 1 cut(s) 730
TfiI GAWTC 3 cut(s) 476, 583, 858
Tru1I TTAA 7 cut(s) 171, 278, 431, 498, 692, 776, 1160
Tru9I TTAA 7 cut(s) 171, 278, 431, 498, 692, 776, 1160
TscAI CASTG 6 cut(s) 15, 352, 823, 888, 1063, 1133
TseFI GTSAC 3 cut(s) 317, 457, 1103
TseI GCWGC 2 cut(s) 20, 332
Tsp45I GTSAC 3 cut(s) 317, 457, 1103
TspDTI ATGAA 3 cut(s) 356, 810, 974
TspGWI ACGGA 2 cut(s) 263, 1174
TspRI CASTG 6 cut(s) 15, 352, 823, 888, 1063, 1133
Van91I CCANNNNNTGG 1 cut(s) 144
VneI GTGCAC 1 cut(s) 1059
VpaK11BI GGWCC 1 cut(s) 593
XapI RAATTY 2 cut(s) 500, 1112
XcmI CCANNNNNNNNNTGG 1 cut(s) 880
XmnI GAANNNNTTC 1 cut(s) 548
XspI CTAG 2 cut(s) 114, 1381
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.