F-box FBD LRR-repeat protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| FBD | PF08387 | 56 - 100 | 8.3e-14 | FBD |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 74 |
| Acc36I | ACCTGC | 3 cut(s) | 25, 74, 305 |
| AcsI | RAATTY | 1 cut(s) | 353 |
| AfaI | GTAC | 3 cut(s) | 15, 272, 347 |
| AgsI | TTSAA | 3 cut(s) | 286, 378, 395 |
| AluBI | AGCT | 1 cut(s) | 222 |
| AluI | AGCT | 1 cut(s) | 222 |
| Alw26I | GTCTC | 1 cut(s) | 54 |
| ApoI | RAATTY | 1 cut(s) | 353 |
| AsuHPI | GGTGA | 1 cut(s) | 55 |
| AsuII | TTCGAA | 1 cut(s) | 366 |
| BbsI | GAAGAC | 1 cut(s) | 311 |
| BcoDI | GTCTC | 1 cut(s) | 54 |
| BfaI | CTAG | 2 cut(s) | 110, 406 |
| BfuAI | ACCTGC | 3 cut(s) | 25, 74, 305 |
| BpiI | GAAGAC | 1 cut(s) | 311 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 238, 270 |
| BpmI | CTGGAG | 1 cut(s) | 150 |
| Bpu14I | TTCGAA | 1 cut(s) | 366 |
| BpuEI | CTTGAG | 2 cut(s) | 77, 185 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 329, 359 |
| Bse3DI | GCAATG | 1 cut(s) | 133 |
| BseGI | GGATG | 1 cut(s) | 244 |
| BseMI | GCAATG | 1 cut(s) | 133 |
| BseMII | CTCAG | 1 cut(s) | 269 |
| BseRI | GAGGAG | 1 cut(s) | 350 |
| BsmAI | GTCTC | 1 cut(s) | 54 |
| Bsp119I | TTCGAA | 1 cut(s) | 366 |
| Bsp1407I | TGTACA | 1 cut(s) | 345 |
| Bsp143I | GATC | 1 cut(s) | 98 |
| BspCNI | CTCAG | 1 cut(s) | 268 |
| BspMI | ACCTGC | 3 cut(s) | 25, 74, 305 |
| BspT104I | TTCGAA | 1 cut(s) | 366 |
| BsrDI | GCAATG | 1 cut(s) | 133 |
| BsrGI | TGTACA | 1 cut(s) | 345 |
| BssMI | GATC | 1 cut(s) | 98 |
| Bst4CI | ACNGT | 2 cut(s) | 48, 275 |
| Bst6I | CTCTTC | 1 cut(s) | 327 |
| BstAUI | TGTACA | 1 cut(s) | 345 |
| BstBI | TTCGAA | 1 cut(s) | 366 |
| BstC8I | GCNNGC | 2 cut(s) | 71, 220 |
| BstDEI | CTNAG | 1 cut(s) | 255 |
| BstF5I | GGATG | 1 cut(s) | 244 |
| BstKTI | GATC | 1 cut(s) | 101 |
| BstMAI | GTCTC | 1 cut(s) | 54 |
| BstMBI | GATC | 1 cut(s) | 98 |
| BstNSI | RCATGY | 1 cut(s) | 152 |
| BstV2I | GAAGAC | 1 cut(s) | 311 |
| BtsCI | GGATG | 1 cut(s) | 244 |
| BtsIMutI | CAGTG | 1 cut(s) | 280 |
| BveI | ACCTGC | 3 cut(s) | 25, 74, 305 |
| Cac8I | GCNNGC | 2 cut(s) | 71, 220 |
| Csp6I | GTAC | 3 cut(s) | 14, 271, 346 |
| CviAII | CATG | 1 cut(s) | 149 |
| CviJI | RGCY | 1 cut(s) | 222 |
| CviKI_1 | RGCY | 1 cut(s) | 222 |
| CviQI | GTAC | 3 cut(s) | 14, 271, 346 |
| DdeI | CTNAG | 1 cut(s) | 255 |
| DpnI | GATC | 1 cut(s) | 100 |
| DpnII | GATC | 1 cut(s) | 98 |
| Eam1104I | CTCTTC | 1 cut(s) | 327 |
| EarI | CTCTTC | 1 cut(s) | 327 |
| Eco32I | GATATC | 1 cut(s) | 77 |
| EcoRV | GATATC | 1 cut(s) | 77 |
| FaeI | CATG | 1 cut(s) | 152 |
| FaiI | YATR | 3 cut(s) | 150, 188, 400 |
| FatI | CATG | 1 cut(s) | 148 |
| FokI | GGATG | 1 cut(s) | 251 |
| FspBI | CTAG | 2 cut(s) | 110, 406 |
| GsuI | CTGGAG | 1 cut(s) | 150 |
| Hin1II | CATG | 1 cut(s) | 152 |
| HindIII | AAGCTT | 1 cut(s) | 220 |
| HinfI | GANTC | 1 cut(s) | 106 |
| HphI | GGTGA | 1 cut(s) | 55 |
| Hpy166II | GTNNAC | 2 cut(s) | 14, 154 |
| Hpy188I | TCNGA | 1 cut(s) | 33 |
| Hpy188III | TCNNGA | 4 cut(s) | 94, 110, 167, 202 |
| Hpy8I | GTNNAC | 2 cut(s) | 14, 154 |
| HpyAV | CCTTC | 1 cut(s) | 225 |
| HpyCH4III | ACNGT | 2 cut(s) | 48, 275 |
| HpyCH4V | TGCA | 1 cut(s) | 138 |
| HpyF3I | CTNAG | 1 cut(s) | 255 |
| Hsp92II | CATG | 1 cut(s) | 152 |
| Kzo9I | GATC | 1 cut(s) | 98 |
| LpnPI | CCDG | 6 cut(s) | 30, 55, 79, 180, 221, 300 |
| MaeI | CTAG | 2 cut(s) | 110, 406 |
| MaeIII | GTNAC | 2 cut(s) | 192, 401 |
| MalI | GATC | 1 cut(s) | 100 |
| MboI | GATC | 1 cut(s) | 98 |
| MboII | GAAGA | 2 cut(s) | 311, 344 |
| MluCI | AATT | 1 cut(s) | 353 |
| MnlI | CCTC | 4 cut(s) | 172, 220, 328, 331 |
| NdeII | GATC | 1 cut(s) | 98 |
| NlaIII | CATG | 1 cut(s) | 152 |
| NmuCI | GTSAC | 1 cut(s) | 192 |
| NspI | RCATGY | 1 cut(s) | 152 |
| NspV | TTCGAA | 1 cut(s) | 366 |
| PaqCI | CACCTGC | 1 cut(s) | 74 |
| PfeI | GAWTC | 1 cut(s) | 106 |
| RsaI | GTAC | 3 cut(s) | 15, 272, 347 |
| RsaNI | GTAC | 3 cut(s) | 14, 271, 346 |
| Sau3AI | GATC | 1 cut(s) | 98 |
| SetI | ASST | 6 cut(s) | 19, 68, 145, 164, 224, 319 |
| SfuI | TTCGAA | 1 cut(s) | 366 |
| SmlI | CTYRAG | 2 cut(s) | 92, 200 |
| SmoI | CTYRAG | 2 cut(s) | 92, 200 |
| Sse9I | AATT | 1 cut(s) | 353 |
| SspMI | CTAG | 2 cut(s) | 110, 406 |
| TaaI | ACNGT | 2 cut(s) | 48, 275 |
| TaqI | TCGA | 1 cut(s) | 366 |
| TasI | AATT | 1 cut(s) | 353 |
| TatI | WGTACW | 2 cut(s) | 270, 345 |
| TfiI | GAWTC | 1 cut(s) | 106 |
| TscAI | CASTG | 1 cut(s) | 280 |
| TseFI | GTSAC | 1 cut(s) | 192 |
| Tsp45I | GTSAC | 1 cut(s) | 192 |
| TspDTI | ATGAA | 2 cut(s) | 17, 255 |
| TspGWI | ACGGA | 1 cut(s) | 118 |
| TspRI | CASTG | 1 cut(s) | 280 |
| XapI | RAATTY | 1 cut(s) | 353 |
| XbaI | TCTAGA | 1 cut(s) | 109 |
| XceI | RCATGY | 1 cut(s) | 152 |
| XspI | CTAG | 2 cut(s) | 110, 406 |