FvH4_6g08520

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000079
Physical Location & Seq
Reverse (-)
5041288 .. 5043738
2451 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g08520.t1

Sequence Viewer

Length: 1500 bp
ATGGATTCAAATTCAAAGCTTTTTAAAGCATGGATTGAAGATAGGATCAGTGGATTGCCAGATGCAATTGTTGTTCACATTCTTTCATTCCTTGAAACAAGATATGCTGTACAGACCTGCCTATTATCTCATAGATGGAACAATGTGTGGACTTATGTTCCGAATCTAGAGGTACACGTAAATTCACTGAAATGTGGTGTAGATCAACATGTGCGTGAATCCGGGCTTGTTGATCGAGTACTTCTGTTCCGGAACTTGTCAAACATTCATAAGTTCCATCTTGCCTGCCTTGGAATCGAAGATTATTTTTATCGAATTGATGCTTGGATTTGCACTGCCATTAGGCGAAATGTTGTAGAACTTGAACTTGATCTTTGGACAACGCCCTCAAATTCCTACACAGGGTTGCTTAAGTTGCCTAGAAGCATTTTCATTTGCAAGACACTGGTAGTTTTGAAGCTGGTACTAACAGATCATGTTATTGCTATCCCTCCTGACTCAAGTTGTTTTCCAAGTCTCAAGTACCTTGATGTTCAGTTATGTCATCCAGTTGCTGCTAAATCATTGGCAAAACTGTTTTCGTGTCGTTATTCTGCACTTGAAGAATTGATTATACATGGAAATATCGGAAGACTTAGAGGTGATGAAGTTTTGAACTTAAATATCTCTGCTCCTAGACTCAAAAGACTACAGATAAGATTCTGTGCTGTTCCAGAGGATGATCCTTATGCCACGGATGGAGGATATGAGTACAAAATTTTTGTCAATGCTAATGCTCCAAACCTTGAAGAGTTCAATGTCAAGTACCTTCTGGCAAGCTATACTTTGAATAGTGTAAAATCGCTAAGCAAAGTTGAGCTTAAACTCAAAGGTCTGCATGCTGGAGAAAACCTCTATTTTGCTGATCGTATACATAAGCTCTTTGCAGAAATTGTGAATGTCAAATGTTTGTCAGTTTTAGCTTCAATTGTGGGGGATCCTGACATTGCATATCAATATCCTATGCCTACGTTCAATAATTTGAACCAGTTGGAGCTACGTCTTCAAACTTGCTGCTCTTGGCAATCACTGCCGATTTTTCTCAATGCGTCACCCAATCTGGAATATCTTGTTTTGGAGAATAACATCAATTGCCGTGCTCATGGTGCTGATATAGACGATGCTGATGATGGTGATGTAGACGATTCTGATGATTATGATTCTCACATTTCTGATAATTATGATGAAGATGACTTGGTACATGAATGGTCTCCTCCCAGGGTTGTTCCTATTTGTTTGCTGTCTTGCCTAAAGACTATTTACCTACGAGGATTTAGAGGACGGAGTGATGAGATAGAAGTCGCAGGGTACTTGTTGAAGCACGGCAAGGTTTTGAACAAGGTGACTATTCATACTTCAAATTTCTGTGAAGAATCAGTAATGGAGTTGTGGCAGACATTTTCAAGGCTTCCTAGGGGTTCAAAGACTTGTGAGATTGAATGGATCCTTCCAAAGTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

500

Amino Acids

56.84

Weight (kDa)

5.68

Isoelectric Point (pI)

44.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 16 - 54 4.4e-06 F-box domain
LRR_At5g56370 PF24758 106 - 237 1.6e-07 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 419 - 463 7.2e-13 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 125
AccI GTMKAC 2 cut(s) 910, 1179
AccIII TCCGGA 1 cut(s) 249
AclWI GGATC 6 cut(s) 53, 716, 971, 984, 1477, 1490
AcsI RAATTY 5 cut(s) 10, 181, 391, 756, 1399
AfaI GTAC 9 cut(s) 111, 174, 240, 465, 524, 752, 806, 1239, 1349
AfiI CCNNNNNNNGG 1 cut(s) 402
AflII CTTAAG 1 cut(s) 410
AflIII ACRYGT 2 cut(s) 175, 208
AjnI CCWGG 1 cut(s) 1256
AjuI GAANNNNNNNTTGG 2 cut(s) 307, 339
AluBI AGCT 7 cut(s) 19, 460, 819, 859, 919, 962, 1036
AluI AGCT 7 cut(s) 19, 460, 819, 859, 919, 962, 1036
Alw21I GWGCWC 1 cut(s) 1141
Alw26I GTCTC 2 cut(s) 521, 1254
AlwI GGATC 6 cut(s) 53, 716, 971, 984, 1477, 1490
AlwNI CAGNNNCTG 1 cut(s) 554
Aor13HI TCCGGA 1 cut(s) 249
ApeKI GCWGC 2 cut(s) 554, 1053
ApoI RAATTY 5 cut(s) 10, 181, 391, 756, 1399
ArsI GACNNNNNNTTYG 2 cut(s) 747, 779
AspA2I CCTAGG 1 cut(s) 1451
AsuC2I CCSGG 1 cut(s) 223
AsuHPI GGTGA 4 cut(s) 653, 1083, 1184, 1393
AvrII CCTAGG 1 cut(s) 1451
BamHI GGATCC 2 cut(s) 976, 1482
BbsI GAAGAC 2 cut(s) 637, 1034
Bbv12I GWGCWC 1 cut(s) 1141
BbvI GCAGC 2 cut(s) 541, 1040
BccI CCATC 4 cut(s) 129, 285, 731, 1163
BceAI ACGGC 2 cut(s) 1119, 1378
BciT130I CCWGG 1 cut(s) 1258
BcnI CCSGG 1 cut(s) 223
BcoDI GTCTC 2 cut(s) 521, 1254
BfaI CTAG 4 cut(s) 167, 420, 675, 1452
BfmI CTRYAG 1 cut(s) 689
BfrI CTTAAG 1 cut(s) 410
BfuAI ACCTGC 1 cut(s) 125
BisI GCNGC 2 cut(s) 555, 1054
BlnI CCTAGG 1 cut(s) 1451
BlpI GCTNAGC 1 cut(s) 845
BlsI GCNGC 2 cut(s) 556, 1055
BmcAI AGTACT 1 cut(s) 240
Bme1390I CCNGG 2 cut(s) 223, 1258
BmiI GGNNCC 2 cut(s) 978, 1484
BmrFI CCNGG 2 cut(s) 223, 1258
BmsI GCATC 3 cut(s) 52, 310, 1150
BpiI GAAGAC 2 cut(s) 637, 1034
BplI GAGNNNNNCTC 2 cut(s) 876, 908
BpmI CTGGAG 1 cut(s) 903
Bpu1102I GCTNAGC 1 cut(s) 845
BpuEI CTTGAG 2 cut(s) 484, 503
BpuMI CCSGG 1 cut(s) 223
BsaAI YACGTR 1 cut(s) 178
BsaI GGTCTC 1 cut(s) 1254
BsaJI CCNNGG 5 cut(s) 289, 732, 1256, 1257, 1451
BsaWI WCCGGW 1 cut(s) 249
Bsc4I CCNNNNNNNGG 1 cut(s) 402
Bse1I ACTGG 3 cut(s) 450, 548, 1027
Bse3DI GCAATG 1 cut(s) 984
BseAI TCCGGA 1 cut(s) 249
BseBI CCWGG 1 cut(s) 1258
BseDI CCNNGG 5 cut(s) 289, 732, 1256, 1257, 1451
BseGI GGATG 3 cut(s) 544, 724, 742
BseLI CCNNNNNNNGG 1 cut(s) 402
BseMI GCAATG 1 cut(s) 984
BseNI ACTGG 3 cut(s) 450, 548, 1027
BseRI GAGGAG 1 cut(s) 1242
BseXI GCAGC 2 cut(s) 541, 1040
BsgI GTGCAG 1 cut(s) 579
BsiHKAI GWGCWC 1 cut(s) 1141
BsiSI CCGG 2 cut(s) 222, 250
BslI CCNNNNNNNGG 1 cut(s) 402
BsmAI GTCTC 2 cut(s) 521, 1254
Bso31I GGTCTC 1 cut(s) 1254
Bsp1286I GDGCHC 1 cut(s) 1141
Bsp13I TCCGGA 1 cut(s) 249
Bsp1407I TGTACA 1 cut(s) 109
Bsp143I GATC 9 cut(s) 45, 202, 232, 370, 472, 721, 904, 976, 1482
Bsp1720I GCTNAGC 1 cut(s) 845
BspEI TCCGGA 1 cut(s) 249
BspLI GGNNCC 2 cut(s) 978, 1484
BspMI ACCTGC 1 cut(s) 125
BspPI GGATC 6 cut(s) 53, 716, 971, 984, 1477, 1490
BspTI CTTAAG 1 cut(s) 410
BspTNI GGTCTC 1 cut(s) 1254
BsrDI GCAATG 1 cut(s) 984
BsrGI TGTACA 1 cut(s) 109
BsrI ACTGG 3 cut(s) 450, 548, 1027
BssECI CCNNGG 5 cut(s) 289, 732, 1256, 1257, 1451
BssMI GATC 9 cut(s) 45, 202, 232, 370, 472, 721, 904, 976, 1482
BssNAI GTATAC 1 cut(s) 911
BssT1I CCWWGG 2 cut(s) 289, 1451
Bst1107I GTATAC 1 cut(s) 911
Bst2UI CCWGG 1 cut(s) 1258
Bst4CI ACNGT 1 cut(s) 576
Bst6I CTCTTC 1 cut(s) 783
BstAFI CTTAAG 1 cut(s) 410
BstAPI GCANNNNNTGC 1 cut(s) 1069
BstAUI TGTACA 1 cut(s) 109
BstBAI YACGTR 1 cut(s) 178
BstC8I GCNNGC 3 cut(s) 286, 817, 879
BstDEI CTNAG 2 cut(s) 635, 845
BstDSI CCRYGG 1 cut(s) 732
BstF5I GGATG 3 cut(s) 544, 724, 742
BstKTI GATC 9 cut(s) 48, 205, 235, 373, 475, 724, 907, 979, 1485
BstMAI GTCTC 2 cut(s) 521, 1254
BstMBI GATC 9 cut(s) 45, 202, 232, 370, 472, 721, 904, 976, 1482
BstMWI GCNNNNNNNGC 3 cut(s) 415, 1069, 1145
BstNI CCWGG 1 cut(s) 1258
BstNSI RCATGY 2 cut(s) 212, 881
BstSCI CCNGG 2 cut(s) 221, 1256
BstSFI CTRYAG 1 cut(s) 689
BstV1I GCAGC 2 cut(s) 541, 1040
BstV2I GAAGAC 2 cut(s) 637, 1034
BstX2I RGATCY 2 cut(s) 976, 1482
BstYI RGATCY 2 cut(s) 976, 1482
BstZ17I GTATAC 1 cut(s) 911
BtgI CCRYGG 1 cut(s) 732
BtsCI GGATG 3 cut(s) 544, 724, 742
BtsI GCAGTG 2 cut(s) 333, 1067
BtsIMutI CAGTG 5 cut(s) 55, 185, 333, 443, 1067
BveI ACCTGC 1 cut(s) 125
Cac8I GCNNGC 3 cut(s) 286, 817, 879
CaiI CAGNNNCTG 1 cut(s) 554
CseI GACGC 1 cut(s) 1077
Csp6I GTAC 9 cut(s) 110, 173, 239, 464, 523, 751, 805, 1238, 1348
CviAII CATG 7 cut(s) 30, 209, 476, 617, 878, 1142, 1241
CviJI RGCY 9 cut(s) 19, 226, 460, 819, 859, 919, 962, 1036, 1447
CviKI_1 RGCY 9 cut(s) 19, 226, 460, 819, 859, 919, 962, 1036, 1447
CviQI GTAC 9 cut(s) 110, 173, 239, 464, 523, 751, 805, 1238, 1348
DdeI CTNAG 2 cut(s) 635, 845
DpnI GATC 9 cut(s) 47, 204, 234, 372, 474, 723, 906, 978, 1484
DpnII GATC 9 cut(s) 45, 202, 232, 370, 472, 721, 904, 976, 1482
DraI TTTAAA 1 cut(s) 25
Eam1104I CTCTTC 1 cut(s) 783
EarI CTCTTC 1 cut(s) 783
Eco130I CCWWGG 2 cut(s) 289, 1451
Eco31I GGTCTC 1 cut(s) 1254
EcoRII CCWGG 1 cut(s) 1256
EcoT14I CCWWGG 2 cut(s) 289, 1451
ErhI CCWWGG 2 cut(s) 289, 1451
FaeI CATG 7 cut(s) 33, 212, 479, 620, 881, 1145, 1244
FalI AAGNNNNNCTT 4 cut(s) 808, 840, 843, 875
FatI CATG 7 cut(s) 29, 208, 475, 616, 877, 1141, 1240
FblI GTMKAC 2 cut(s) 910, 1179
Fnu4HI GCNGC 2 cut(s) 555, 1054
FokI GGATG 3 cut(s) 531, 731, 749
Fsp4HI GCNGC 2 cut(s) 555, 1054
FspBI CTAG 4 cut(s) 167, 420, 675, 1452
GluI GCNGC 2 cut(s) 555, 1054
GsuI CTGGAG 1 cut(s) 903
HapII CCGG 2 cut(s) 222, 250
HgaI GACGC 1 cut(s) 1077
Hin1II CATG 7 cut(s) 33, 212, 479, 620, 881, 1145, 1244
HindIII AAGCTT 1 cut(s) 17
HpaII CCGG 2 cut(s) 222, 250
HphI GGTGA 4 cut(s) 653, 1083, 1184, 1393
Hpy166II GTNNAC 5 cut(s) 76, 150, 175, 911, 1180
Hpy188I TCNGA 4 cut(s) 162, 629, 1189, 1213
Hpy188III TCNNGA 6 cut(s) 167, 250, 494, 713, 980, 1100
Hpy8I GTNNAC 5 cut(s) 76, 150, 175, 911, 1180
HpyAV CCTTC 2 cut(s) 818, 1496
HpyCH4III ACNGT 1 cut(s) 576
HpyCH4IV ACGT 3 cut(s) 177, 1010, 1039
HpyCH4V TGCA 7 cut(s) 65, 333, 438, 596, 877, 926, 989
HpyF10VI GCNNNNNNNGC 3 cut(s) 415, 1069, 1145
HpyF3I CTNAG 2 cut(s) 635, 845
HpySE526I ACGT 3 cut(s) 177, 1010, 1039
Hsp92II CATG 7 cut(s) 33, 212, 479, 620, 881, 1145, 1244
Kpn2I TCCGGA 1 cut(s) 249
Kzo9I GATC 9 cut(s) 45, 202, 232, 370, 472, 721, 904, 976, 1482
LmnI GCTCC 3 cut(s) 676, 781, 1033
Lsp1109I GCAGC 2 cut(s) 541, 1040
LweI GCATC 3 cut(s) 52, 310, 1150
MaeI CTAG 4 cut(s) 167, 420, 675, 1452
MaeII ACGT 3 cut(s) 177, 1010, 1039
MaeIII GTNAC 2 cut(s) 1089, 1381
MalI GATC 9 cut(s) 47, 204, 234, 372, 474, 723, 906, 978, 1484
MboI GATC 9 cut(s) 45, 202, 232, 370, 472, 721, 904, 976, 1482
MboII GAAGA 8 cut(s) 50, 311, 614, 642, 800, 1034, 1238, 1421
MfeI CAATTG 3 cut(s) 66, 966, 1129
MflI RGATCY 2 cut(s) 976, 1482
MhlI GDGCHC 1 cut(s) 1141
MlyI GAGTC 2 cut(s) 491, 672
MmeI TCCRAC 1 cut(s) 1011
MroI TCCGGA 1 cut(s) 249
MseI TTAA 4 cut(s) 24, 411, 659, 861
MslI CAYNNNNRTG 2 cut(s) 190, 213
MspCI CTTAAG 1 cut(s) 410
MspI CCGG 2 cut(s) 222, 250
MspR9I CCNGG 2 cut(s) 223, 1258
MunI CAATTG 3 cut(s) 66, 966, 1129
MvaI CCWGG 1 cut(s) 1258
MwoI GCNNNNNNNGC 3 cut(s) 415, 1069, 1145
NciI CCSGG 1 cut(s) 223
NdeII GATC 9 cut(s) 45, 202, 232, 370, 472, 721, 904, 976, 1482
NlaIII CATG 7 cut(s) 33, 212, 479, 620, 881, 1145, 1244
NlaIV GGNNCC 2 cut(s) 978, 1484
NmuCI GTSAC 2 cut(s) 1089, 1381
NspI RCATGY 2 cut(s) 212, 881
PaeI GCATGC 1 cut(s) 881
PasI CCCWGGG 1 cut(s) 1257
PciI ACATGT 1 cut(s) 208
PfeI GAWTC 8 cut(s) 5, 163, 218, 294, 699, 1184, 1199, 1412
PkrI GCNGC 2 cut(s) 556, 1055
PleI GAGTC 2 cut(s) 491, 672
PpsI GAGTC 2 cut(s) 491, 672
Ppu21I YACGTR 1 cut(s) 178
PscI ACATGT 1 cut(s) 208
Psp6I CCWGG 1 cut(s) 1256
PspGI CCWGG 1 cut(s) 1256
PspN4I GGNNCC 2 cut(s) 978, 1484
PstNI CAGNNNCTG 1 cut(s) 554
PsuI RGATCY 2 cut(s) 976, 1482
RsaI GTAC 9 cut(s) 111, 174, 240, 465, 524, 752, 806, 1239, 1349
RsaNI GTAC 9 cut(s) 110, 173, 239, 464, 523, 751, 805, 1238, 1348
RseI CAYNNNNRTG 2 cut(s) 190, 213
SaqAI TTAA 4 cut(s) 24, 411, 659, 861
SatI GCNGC 2 cut(s) 555, 1054
Sau3AI GATC 9 cut(s) 45, 202, 232, 370, 472, 721, 904, 976, 1482
ScaI AGTACT 1 cut(s) 240
SchI GAGTC 2 cut(s) 491, 672
ScrFI CCNGG 2 cut(s) 223, 1258
SduI GDGCHC 1 cut(s) 1141
SfaNI GCATC 3 cut(s) 52, 310, 1150
SfcI CTRYAG 1 cut(s) 689
SmiMI CAYNNNNRTG 2 cut(s) 190, 213
SmlI CTYRAG 3 cut(s) 410, 499, 518
SmoI CTYRAG 3 cut(s) 410, 499, 518
SphI GCATGC 1 cut(s) 881
SspMI CTAG 4 cut(s) 167, 420, 675, 1452
StyD4I CCNGG 2 cut(s) 221, 1256
StyI CCWWGG 2 cut(s) 289, 1451
TaaI ACNGT 1 cut(s) 576
TaiI ACGT 3 cut(s) 180, 1013, 1042
TaqI TCGA 3 cut(s) 235, 297, 313
TatI WGTACW 3 cut(s) 109, 238, 750
TfiI GAWTC 8 cut(s) 5, 163, 218, 294, 699, 1184, 1199, 1412
Tru1I TTAA 4 cut(s) 24, 411, 659, 861
Tru9I TTAA 4 cut(s) 24, 411, 659, 861
TscAI CASTG 5 cut(s) 55, 192, 340, 450, 1074
TseFI GTSAC 2 cut(s) 1089, 1381
TseI GCWGC 2 cut(s) 554, 1053
Tsp45I GTSAC 2 cut(s) 1089, 1381
TspDTI ATGAA 7 cut(s) 75, 257, 421, 660, 1239, 1257, 1379
TspGWI ACGGA 2 cut(s) 749, 1336
TspRI CASTG 5 cut(s) 55, 192, 340, 450, 1074
Vha464I CTTAAG 1 cut(s) 410
XapI RAATTY 5 cut(s) 10, 181, 391, 756, 1399
XbaI TCTAGA 1 cut(s) 166
XceI RCATGY 2 cut(s) 212, 881
XmaJI CCTAGG 1 cut(s) 1451
XmiI GTMKAC 2 cut(s) 910, 1179
XspI CTAG 4 cut(s) 167, 420, 675, 1452
ZrmI AGTACT 1 cut(s) 240
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.