Rh3CG091300

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0000079
Physical Location & Seq
Reverse (-)
7103185 .. 7104982
1798 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG091300.1

Sequence Viewer

Length: 1260 bp
ATGGGTTCAAACTCAAAGCTTTTTAAAGCATGTATTGAAGATAGGATCAGTGGATTGCCAGATGCAATTCTTTTCCACATTATTTCATTCCTTGAAACAAGAGATGCTGTAAAGACCTGCCTATTATCTCATAGATGGAACAATGTGTGGACTTATGTTCCGAATCTAGAGGTATATGTATCTTCACCGAAATATGACTCAGATGAACATGTGCGTCAAGCCGGGTTTGTTGATCGAGTATATTATCCTGTTGCTGTCGATGCAGTGGCAAAACTGTTTTCATGTTGTTTCTCTGCACTTGAAGATTTAATTATACATGGAAATCTCGGAAGACTTAGAGATGATGAAGTTTTGAACTTAACTATCTCTGCCCCTAAACTCAAAAGACTACAGATAAAATTCTGTGCTGTTCCAGAGGATGACCCTTATGCTACGGATGGAGGGCATGAGTACAAAATTTTTGTTAATGCTAATGCTCCAAACCTTGAAAAGTTCAATGTCGAGTACCTTTTGGCAAGCTATTCTTTGAAGAATGTAAAATCGCTAAGCACAGTTGAGCTTAAATTCAAAGGTCTGCATGCGGGAGAGATCCTATGTTTTGCTGATCGGATACATAAGCTCTTTGCAGAAATCGTGAATGTCAAATATTTTTCAATTTTAGCTTCAATTGTGGGGGACCCTGACATTGCATATCAATATGCTATGCCTAGGTTCAATTATTTGAATCAGTTGGAGCTACGTCTTCAAACTTGCTGCTCTTGGCAATCACTGCCAATTTTTCTCAATGCGTCACCCAATCTGGAATATCTTCTGTTGGAGAATAACATCAATTGCCGTGCTCATGGCGCTCATATAGACGATCCTGATGGTGATATAGACGATCCTGATAAATATGATTATGATTCTGACAATTCTGACAATTATGATGAAGATGACTTGGTACATGAATGGTTTCCTCCCGAGGTTGTTCCTATTTGTCTGTTGTCATGCCTAAAGACTATTCACATACGGGGATTTCGAGGACGGATCGATGAGATGGAAGTCGCAGGGTACTTGTTGAAGCACGGGAAGGTTTTGAACAAGGTGACAATTCATACTTCTAATTTCTGTCAAGAATCAGTAATGGAGTTGTGGCAGATATTTTCAAGGCTCCCTAGGGGTTCAAAGACTTGTGAAATTGAATATATGGATCCTTCCAAAGTTGTGAATGCATCATTTCTTTGCGAAATGAACTTGAATTTACTATTGCTTGTAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

419

Amino Acids

47.74

Weight (kDa)

5.15

Isoelectric Point (pI)

39.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 16 - 54 7.7e-07 F-box domain
FBD PF08387 320 - 364 2.1e-14 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 125
AciI CCGC 1 cut(s) 581
AclWI GGATC 7 cut(s) 53, 583, 854, 875, 1034, 1184, 1197
AcsI RAATTY 4 cut(s) 398, 456, 563, 1237
AfaI GTAC 4 cut(s) 452, 506, 942, 1052
AflIII ACRYGT 1 cut(s) 208
AluBI AGCT 6 cut(s) 19, 519, 559, 619, 662, 736
AluI AGCT 6 cut(s) 19, 519, 559, 619, 662, 736
Alw21I GWGCWC 1 cut(s) 841
AlwI GGATC 7 cut(s) 53, 583, 854, 875, 1034, 1184, 1197
Ama87I CYCGRG 1 cut(s) 959
ApeKI GCWGC 1 cut(s) 753
ApoI RAATTY 4 cut(s) 398, 456, 563, 1237
Asp700I GAANNNNTTC 2 cut(s) 807, 951
AspA2I CCTAGG 2 cut(s) 707, 1154
AspLEI GCGC 1 cut(s) 848
AspS9I GGNCC 1 cut(s) 676
AsuC2I CCSGG 1 cut(s) 223
AsuHPI GGTGA 4 cut(s) 177, 783, 881, 1096
AvaI CYCGRG 1 cut(s) 959
AvaII GGWCC 1 cut(s) 676
AvrII CCTAGG 2 cut(s) 707, 1154
BamHI GGATCC 1 cut(s) 1189
BbsI GAAGAC 2 cut(s) 337, 734
Bbv12I GWGCWC 1 cut(s) 841
BbvI GCAGC 1 cut(s) 740
BccI CCATC 4 cut(s) 129, 431, 860, 1030
BceAI ACGGC 1 cut(s) 819
BciVI GTATCC 1 cut(s) 603
BcnI CCSGG 1 cut(s) 223
BfaI CTAG 3 cut(s) 167, 708, 1155
BfmI CTRYAG 1 cut(s) 389
BfoI RGCGCY 1 cut(s) 849
BfuAI ACCTGC 1 cut(s) 125
BfuI GTATCC 1 cut(s) 603
BisI GCNGC 1 cut(s) 754
BlnI CCTAGG 2 cut(s) 707, 1154
BlpI GCTNAGC 1 cut(s) 545
BlsI GCNGC 1 cut(s) 755
Bme1390I CCNGG 1 cut(s) 223
Bme18I GGWCC 1 cut(s) 676
BmeT110I CYCGRG 1 cut(s) 959
BmgT120I GGNCC 1 cut(s) 676
BmiI GGNNCC 4 cut(s) 677, 678, 1151, 1191
BmrFI CCNGG 1 cut(s) 223
BmsI GCATC 4 cut(s) 52, 94, 250, 1220
BpiI GAAGAC 2 cut(s) 337, 734
Bpu1102I GCTNAGC 1 cut(s) 545
BpuMI CCSGG 1 cut(s) 223
Bsa29I ATCGAT 1 cut(s) 1029
BsaJI CCNNGG 3 cut(s) 707, 960, 1154
Bse3DI GCAATG 1 cut(s) 684
BseCI ATCGAT 1 cut(s) 1029
BseDI CCNNGG 3 cut(s) 707, 960, 1154
BseGI GGATG 2 cut(s) 424, 442
BseMI GCAATG 1 cut(s) 684
BseMII CTCAG 1 cut(s) 213
BseXI GCAGC 1 cut(s) 740
BsgI GTGCAG 1 cut(s) 279
BshVI ATCGAT 1 cut(s) 1029
BsiHKAI GWGCWC 1 cut(s) 841
BsiHKCI CYCGRG 1 cut(s) 959
BsiSI CCGG 1 cut(s) 222
BslFI GGGAC 1 cut(s) 689
BsmFI GGGAC 1 cut(s) 689
BsmI GAATGC 1 cut(s) 1213
BsoBI CYCGRG 1 cut(s) 959
Bsp1286I GDGCHC 1 cut(s) 841
Bsp143I GATC 8 cut(s) 45, 232, 588, 604, 859, 880, 1026, 1189
Bsp1720I GCTNAGC 1 cut(s) 545
BspACI CCGC 1 cut(s) 581
BspCNI CTCAG 1 cut(s) 212
BspDI ATCGAT 1 cut(s) 1029
BspLI GGNNCC 4 cut(s) 677, 678, 1151, 1191
BspMI ACCTGC 1 cut(s) 125
BspPI GGATC 7 cut(s) 53, 583, 854, 875, 1034, 1184, 1197
BsrDI GCAATG 1 cut(s) 684
BssECI CCNNGG 3 cut(s) 707, 960, 1154
BssMI GATC 8 cut(s) 45, 232, 588, 604, 859, 880, 1026, 1189
BssT1I CCWWGG 2 cut(s) 707, 1154
Bst4CI ACNGT 2 cut(s) 276, 553
BstAPI GCANNNNNTGC 1 cut(s) 769
BstC8I GCNNGC 2 cut(s) 517, 579
BstDEI CTNAG 3 cut(s) 199, 335, 545
BstF5I GGATG 2 cut(s) 424, 442
BstH2I RGCGCY 1 cut(s) 849
BstHHI GCGC 1 cut(s) 848
BstKTI GATC 8 cut(s) 48, 235, 591, 607, 862, 883, 1029, 1192
BstMBI GATC 8 cut(s) 45, 232, 588, 604, 859, 880, 1026, 1189
BstMWI GCNNNNNNNGC 3 cut(s) 260, 769, 845
BstNSI RCATGY 3 cut(s) 33, 212, 581
BstSCI CCNGG 1 cut(s) 221
BstSFI CTRYAG 1 cut(s) 389
BstV1I GCAGC 1 cut(s) 740
BstV2I GAAGAC 2 cut(s) 337, 734
BstX2I RGATCY 2 cut(s) 588, 1189
BstYI RGATCY 2 cut(s) 588, 1189
Bsu15I ATCGAT 1 cut(s) 1029
BsuI GTATCC 1 cut(s) 603
BsuTUI ATCGAT 1 cut(s) 1029
BtsCI GGATG 2 cut(s) 424, 442
BtsI GCAGTG 2 cut(s) 270, 767
BtsIMutI CAGTG 3 cut(s) 55, 270, 767
BveI ACCTGC 1 cut(s) 125
Cac8I GCNNGC 2 cut(s) 517, 579
CfoI GCGC 1 cut(s) 848
Cfr13I GGNCC 1 cut(s) 676
ClaI ATCGAT 1 cut(s) 1029
CseI GACGC 2 cut(s) 203, 777
Csp6I GTAC 4 cut(s) 451, 505, 941, 1051
CviJI RGCY 8 cut(s) 19, 221, 519, 559, 619, 662, 736, 1150
CviKI_1 RGCY 8 cut(s) 19, 221, 519, 559, 619, 662, 736, 1150
CviQI GTAC 4 cut(s) 451, 505, 941, 1051
DdeI CTNAG 3 cut(s) 199, 335, 545
DpnI GATC 8 cut(s) 47, 234, 590, 606, 861, 882, 1028, 1191
DpnII GATC 8 cut(s) 45, 232, 588, 604, 859, 880, 1026, 1189
DraI TTTAAA 1 cut(s) 25
Eco130I CCWWGG 2 cut(s) 707, 1154
Eco47I GGWCC 1 cut(s) 676
Eco88I CYCGRG 1 cut(s) 959
EcoO109I RGGNCCY 1 cut(s) 676
EcoT14I CCWWGG 2 cut(s) 707, 1154
EcoT22I ATGCAT 1 cut(s) 1213
ErhI CCWWGG 2 cut(s) 707, 1154
FalI AAGNNNNNCTT 2 cut(s) 508, 540
FaqI GGGAC 1 cut(s) 689
FauI CCCGC 1 cut(s) 574
Fnu4HI GCNGC 1 cut(s) 754
FokI GGATG 2 cut(s) 431, 449
Fsp4HI GCNGC 1 cut(s) 754
FspBI CTAG 3 cut(s) 167, 708, 1155
GlaI GCGC 1 cut(s) 847
GluI GCNGC 1 cut(s) 754
HaeII RGCGCY 1 cut(s) 849
HapII CCGG 1 cut(s) 222
HgaI GACGC 2 cut(s) 203, 777
HhaI GCGC 1 cut(s) 848
Hin6I GCGC 1 cut(s) 846
HinP1I GCGC 1 cut(s) 846
HindIII AAGCTT 1 cut(s) 17
HinfI GANTC 5 cut(s) 163, 197, 724, 902, 1115
HpaII CCGG 1 cut(s) 222
HphI GGTGA 4 cut(s) 177, 783, 881, 1096
Hpy166II GTNNAC 1 cut(s) 150
Hpy188I TCNGA 6 cut(s) 162, 202, 329, 609, 907, 916
Hpy188III TCNNGA 8 cut(s) 167, 413, 634, 800, 863, 884, 959, 1112
Hpy8I GTNNAC 1 cut(s) 150
HpyAV CCTTC 2 cut(s) 1063, 1203
HpyCH4III ACNGT 2 cut(s) 276, 553
HpyCH4IV ACGT 1 cut(s) 739
HpyCH4V TGCA 7 cut(s) 65, 263, 296, 577, 626, 689, 1211
HpyF10VI GCNNNNNNNGC 3 cut(s) 260, 769, 845
HpyF3I CTNAG 3 cut(s) 199, 335, 545
HpySE526I ACGT 1 cut(s) 739
HspAI GCGC 1 cut(s) 846
KflI GGGWCCC 1 cut(s) 676
Kzo9I GATC 8 cut(s) 45, 232, 588, 604, 859, 880, 1026, 1189
LmnI GCTCC 3 cut(s) 481, 733, 1155
Lsp1109I GCAGC 1 cut(s) 740
LweI GCATC 4 cut(s) 52, 94, 250, 1220
MaeI CTAG 3 cut(s) 167, 708, 1155
MaeII ACGT 1 cut(s) 739
MaeIII GTNAC 2 cut(s) 789, 1084
MalI GATC 8 cut(s) 47, 234, 590, 606, 861, 882, 1028, 1191
MboI GATC 8 cut(s) 45, 232, 588, 604, 859, 880, 1026, 1189
MboII GAAGA 8 cut(s) 50, 174, 314, 342, 541, 734, 800, 941
MfeI CAATTG 2 cut(s) 666, 829
MflI RGATCY 2 cut(s) 588, 1189
MhlI GDGCHC 1 cut(s) 841
MlyI GAGTC 1 cut(s) 191
MmeI TCCRAC 2 cut(s) 711, 795
MnlI CCTC 6 cut(s) 163, 409, 434, 955, 966, 1013
Mph1103I ATGCAT 1 cut(s) 1213
MroXI GAANNNNTTC 2 cut(s) 807, 951
MseI TTAA 5 cut(s) 24, 308, 359, 465, 561
MspI CCGG 1 cut(s) 222
MspR9I CCNGG 1 cut(s) 223
MunI CAATTG 2 cut(s) 666, 829
Mva1269I GAATGC 1 cut(s) 1213
MwoI GCNNNNNNNGC 3 cut(s) 260, 769, 845
NciI CCSGG 1 cut(s) 223
NdeII GATC 8 cut(s) 45, 232, 588, 604, 859, 880, 1026, 1189
NlaIV GGNNCC 4 cut(s) 677, 678, 1151, 1191
NmuCI GTSAC 2 cut(s) 789, 1084
NsiI ATGCAT 1 cut(s) 1213
NspI RCATGY 3 cut(s) 33, 212, 581
PaeI GCATGC 1 cut(s) 581
PciI ACATGT 1 cut(s) 208
PcsI WCGNNNNNNNCGW 1 cut(s) 1015
PctI GAATGC 1 cut(s) 1213
PdmI GAANNNNTTC 2 cut(s) 807, 951
PfeI GAWTC 4 cut(s) 163, 724, 902, 1115
PkrI GCNGC 1 cut(s) 755
PleI GAGTC 1 cut(s) 191
PpsI GAGTC 1 cut(s) 191
PpuMI RGGWCCY 1 cut(s) 676
PscI ACATGT 1 cut(s) 208
Psp5II RGGWCCY 1 cut(s) 676
PspN4I GGNNCC 4 cut(s) 677, 678, 1151, 1191
PspPI GGNCC 1 cut(s) 676
PspPPI RGGWCCY 1 cut(s) 676
PsuI RGATCY 2 cut(s) 588, 1189
RsaI GTAC 4 cut(s) 452, 506, 942, 1052
RsaNI GTAC 4 cut(s) 451, 505, 941, 1051
SaqAI TTAA 5 cut(s) 24, 308, 359, 465, 561
SatI GCNGC 1 cut(s) 754
Sau3AI GATC 8 cut(s) 45, 232, 588, 604, 859, 880, 1026, 1189
Sau96I GGNCC 1 cut(s) 676
SchI GAGTC 1 cut(s) 191
ScrFI CCNGG 1 cut(s) 223
SduI GDGCHC 1 cut(s) 841
SfaNI GCATC 4 cut(s) 52, 94, 250, 1220
SfcI CTRYAG 1 cut(s) 389
SinI GGWCC 1 cut(s) 676
SphI GCATGC 1 cut(s) 581
SsiI CCGC 1 cut(s) 581
SspI AATATT 1 cut(s) 647
SspMI CTAG 3 cut(s) 167, 708, 1155
StyD4I CCNGG 1 cut(s) 221
StyI CCWWGG 2 cut(s) 707, 1154
TaaI ACNGT 2 cut(s) 276, 553
TaiI ACGT 1 cut(s) 742
TaqI TCGA 5 cut(s) 235, 258, 501, 1018, 1029
TatI WGTACW 1 cut(s) 450
TfiI GAWTC 4 cut(s) 163, 724, 902, 1115
Tru1I TTAA 5 cut(s) 24, 308, 359, 465, 561
Tru9I TTAA 5 cut(s) 24, 308, 359, 465, 561
TscAI CASTG 3 cut(s) 55, 270, 774
TseFI GTSAC 2 cut(s) 789, 1084
TseI GCWGC 1 cut(s) 753
Tsp45I GTSAC 2 cut(s) 789, 1084
TspDTI ATGAA 8 cut(s) 75, 219, 270, 360, 942, 960, 1082, 1244
TspGWI ACGGA 2 cut(s) 449, 1039
TspRI CASTG 3 cut(s) 55, 270, 774
VpaK11BI GGWCC 1 cut(s) 676
XapI RAATTY 4 cut(s) 398, 456, 563, 1237
XbaI TCTAGA 1 cut(s) 166
XceI RCATGY 3 cut(s) 33, 212, 581
XmaJI CCTAGG 2 cut(s) 707, 1154
XmnI GAANNNNTTC 2 cut(s) 807, 951
XspI CTAG 3 cut(s) 167, 708, 1155
Zsp2I ATGCAT 1 cut(s) 1213
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.