RLG00000003903

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000079
Physical Location & Seq
Reverse (-)
54091834 .. 54098324
6491 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000003903

Sequence Viewer

Length: 1593 bp
ATGATGAATGTTTCTCTTATTGATTCTTGGGTTTCCACTGCCATAAAACATAATGTTGTTGAACTTGATCTTAGTTTGGGGGGTCCTCGCTTGCCGGATTTTGAGATTCCGAGATGTCTTTTCATGTGCAAAACGTTGGTTAGTTTGGAGTTGGGTCTGCACAAAAACATTCGTGCCGTTACTCCTCCCTCACATTGTTTCCCCTGTCTCAAGTTGCTACATGTTACATTTTGGTTTCCTGATTCTCATACAGTGGAGAAGCTATTTTCTTTTTTCCCTGTACTTGAAGATCTTATTATAGATGGAGAAGATGAAGATGCGTCAGCTTTCAATCTTGTTATATCTGCACCCAAACTGAAAAGACTGCAAATTAGTTTCATTGTCTGTAAATTTGCTATGATAGCTGCTGCAAATCATTTGGAGGATTACGAAAATTATGGGTGCCAAATTTTTGTTAGTGCTGATGCTCCAAATCTTGAAGAGTTAGATATCTACTATGATATTCTGGTGAGCTATTCTTTGAAGAATGCCAAATGTCTGAGGAAAGCCGAGATAGAGATAACACCGCCATTTAAGCTCGCGGAGAAGAGTAGAAAGAGTGGTAAAATGGCTTCAAAATCAAAGCTTCAAAAATCAAGCATTGAAGATAGGATTAGTGGGTTGCCGGATGCAATTCTTTGCCATATACTTTCCTGTTGTACTACAAGAGAGGCTGTGCAGACCAGTGTTTTATCACGTAGATGGAAGAATGTGTGGGCTTCTGTTCCCAGTTTAGATTTGGATGAACAAAAATATCACCTGGATTATGTTAATCGTACTTTACCGAGGCCACTAAGATACGTCTTGAGTAGTTTTCCGCAGTTTGTGAATCATCTACTTTTGTTTCGTAGCCCCATAAACATTCATAGACTCCATCTTAAGACTACTATGACGTCTGATGCTTCTCTTATTAATGCTTGGATTTCCACTGCCGTCAAGCATAATGTTGTGGAACTTGATCTTTGTTTGGAGACACCTACAGAGCCACATTTTGAGATCCCCAAAAGCGTTTTTTTGTGCAACACATTGGTGAGTTTGAAGCTTTGGCTGTCCCAAGATGTTAGTGCTGTTACTCCTAGCGCAAAATGTTTCCCGTGTCTCAAGTACCTCCATGTTACAGTTTGGTGTCCTGATTCTGACTCGATGGAGAAGCTCTTTTCTTGTTGCCCTGCACTTGATCATTTGATTATAGATGGACAAGTTGACGACGTTTTGGCTTATAATATCAGTATCTCTGGACCTAAGCTGAAAAGGCTGCAAATTAGCTTCATTGTCCATAAGTTTGATACAAGATCTAGTAATGTTGTAAATTATGTGTGCCAAATATTCGTTAATGCCGATGCTCCATACCTTGAAGAGTTGGATATATACTATGACTTTTTGGTGAGCTATTCTTTGACGGATGCCAAATCTATGAGGAAAGCCAAGATAGATTTCTTAGATGTGGACGAGCTTGACAACCTTCATTGTTTCCTTGGCCTTGCTGATCAGCCAATAGCCCTTTGTCTCCAAGCAGTTAATAAGCACAGAAAAAGACTGAGCAGTCTGCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

531

Amino Acids

60.12

Weight (kDa)

6.32

Isoelectric Point (pI)

46.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At5g56370 PF24758 7 - 162 9.7e-12 FBD-associated F-box protein At5g56370, LRR repeats
F-box PF00646 218 - 257 2.5e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 299 - 434 5.1e-07 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 318 - 477 2.3e-15 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1260
AasI GACNNNNNNGTC 1 cut(s) 1581
AatII GACGTC 1 cut(s) 935
AccB1I GGYRCC 1 cut(s) 441
AccII CGCG 1 cut(s) 581
AciI CCGC 3 cut(s) 566, 581, 857
AclI AACGTT 1 cut(s) 134
AclWI GGATC 1 cut(s) 1030
AcsI RAATTY 2 cut(s) 389, 447
AcyI GRCGYC 1 cut(s) 932
AfaI GTAC 4 cut(s) 282, 700, 817, 1145
AflII CTTAAG 1 cut(s) 917
AflIII ACRYGT 1 cut(s) 220
AjnI CCWGG 1 cut(s) 798
AjuI GAANNNNNNNTTGG 2 cut(s) 1457, 1489
AleI CACNNNNGTG 1 cut(s) 1067
Alw26I GTCTC 4 cut(s) 212, 1004, 1142, 1550
AlwI GGATC 1 cut(s) 1030
AoxI GGCC 2 cut(s) 827, 1516
ApeKI GCWGC 3 cut(s) 404, 407, 1294
ApoI RAATTY 2 cut(s) 389, 447
AseI ATTAAT 1 cut(s) 951
AspLEI GCGC 1 cut(s) 1121
AspS9I GGNCC 2 cut(s) 83, 1277
AsuHPI GGTGA 4 cut(s) 520, 788, 1081, 1435
AvaII GGWCC 2 cut(s) 83, 1277
BanI GGYRCC 1 cut(s) 441
BarI GAAGNNNNNNTAC 2 cut(s) 595, 627
BbvI GCAGC 3 cut(s) 391, 394, 1281
BccI CCATC 5 cut(s) 296, 735, 921, 1177, 1226
BceAI ACGGC 2 cut(s) 161, 956
BciT130I CCWGG 1 cut(s) 800
BclI TGATCA 2 cut(s) 1216, 1525
BcoDI GTCTC 4 cut(s) 212, 1004, 1142, 1550
BfaI CTAG 2 cut(s) 1116, 1335
BfmI CTRYAG 2 cut(s) 1017, 1586
BfrI CTTAAG 1 cut(s) 917
BglII AGATCT 2 cut(s) 289, 1331
BisI GCNGC 3 cut(s) 405, 408, 1295
BlsI GCNGC 3 cut(s) 406, 409, 1296
Bme1390I CCNGG 1 cut(s) 800
Bme18I GGWCC 2 cut(s) 83, 1277
BmgT120I GGNCC 2 cut(s) 83, 1277
BmiI GGNNCC 2 cut(s) 84, 443
BmrFI CCNGG 1 cut(s) 800
BmrI ACTGGG 1 cut(s) 762
BmsI GCATC 6 cut(s) 307, 454, 658, 928, 1369, 1432
BmuI ACTGGG 1 cut(s) 762
Bpu10I CCTNAGC 1 cut(s) 1281
BpuEI CTTGAG 3 cut(s) 194, 865, 1124
BsaAI YACGTR 1 cut(s) 737
BsaHI GRCGYC 1 cut(s) 932
BsaJI CCNNGG 2 cut(s) 824, 1513
Bse1I ACTGG 2 cut(s) 723, 768
BseBI CCWGG 1 cut(s) 800
BseDI CCNNGG 2 cut(s) 824, 1513
BseGI GGATG 3 cut(s) 673, 787, 1447
BseMII CTCAG 2 cut(s) 530, 1568
BseNI ACTGG 2 cut(s) 723, 768
BseRI GAGGAG 1 cut(s) 174
BseXI GCAGC 3 cut(s) 391, 394, 1281
BsgI GTGCAG 4 cut(s) 143, 330, 737, 1194
Bsh1236I CGCG 1 cut(s) 581
BshFI GGCC 2 cut(s) 829, 1518
BshNI GGYRCC 1 cut(s) 441
BsiSI CCGG 2 cut(s) 95, 665
BslFI GGGAC 1 cut(s) 1075
BsmAI GTCTC 4 cut(s) 212, 1004, 1142, 1550
BsmFI GGGAC 1 cut(s) 1075
BsmI GAATGC 1 cut(s) 532
BsnI GGCC 2 cut(s) 829, 1518
Bsp143I GATC 7 cut(s) 67, 289, 997, 1035, 1216, 1331, 1525
BspACI CCGC 3 cut(s) 566, 581, 857
BspANI GGCC 2 cut(s) 829, 1518
BspCNI CTCAG 2 cut(s) 531, 1569
BspFNI CGCG 1 cut(s) 581
BspLI GGNNCC 2 cut(s) 84, 443
BspMAI CTGCAG 1 cut(s) 1590
BspPI GGATC 1 cut(s) 1030
BspT107I GGYRCC 1 cut(s) 441
BspTI CTTAAG 1 cut(s) 917
BsrI ACTGG 2 cut(s) 723, 768
BssECI CCNNGG 2 cut(s) 824, 1513
BssMI GATC 7 cut(s) 67, 289, 997, 1035, 1216, 1331, 1525
BssNI GRCGYC 1 cut(s) 932
BssT1I CCWWGG 1 cut(s) 1513
Bst2UI CCWGG 1 cut(s) 800
Bst4CI ACNGT 2 cut(s) 253, 1159
Bst6I CTCTTC 3 cut(s) 474, 581, 1389
BstACI GRCGYC 1 cut(s) 932
BstAFI CTTAAG 1 cut(s) 917
BstBAI YACGTR 1 cut(s) 737
BstC8I GCNNGC 2 cut(s) 92, 579
BstDEI CTNAG 6 cut(s) 71, 539, 833, 1281, 1477, 1577
BstF5I GGATG 3 cut(s) 673, 787, 1447
BstFNI CGCG 1 cut(s) 581
BstHHI GCGC 1 cut(s) 1121
BstKTI GATC 7 cut(s) 70, 292, 1000, 1038, 1219, 1334, 1528
BstMAI GTCTC 4 cut(s) 212, 1004, 1142, 1550
BstMBI GATC 7 cut(s) 67, 289, 997, 1035, 1216, 1331, 1525
BstMWI GCNNNNNNNGC 3 cut(s) 401, 574, 1291
BstNI CCWGG 1 cut(s) 800
BstNSI RCATGY 1 cut(s) 224
BstSCI CCNGG 1 cut(s) 798
BstSFI CTRYAG 2 cut(s) 1017, 1586
BstUI CGCG 1 cut(s) 581
BstV1I GCAGC 3 cut(s) 391, 394, 1281
BstX2I RGATCY 3 cut(s) 289, 1035, 1331
BstYI RGATCY 3 cut(s) 289, 1035, 1331
BsuRI GGCC 2 cut(s) 829, 1518
BtsCI GGATG 3 cut(s) 673, 787, 1447
BtsI GCAGTG 2 cut(s) 36, 966
BtsIMutI CAGTG 4 cut(s) 36, 258, 730, 966
Cac8I GCNNGC 2 cut(s) 92, 579
CfoI GCGC 1 cut(s) 1121
Cfr13I GGNCC 2 cut(s) 83, 1277
CseI GACGC 1 cut(s) 309
Csp6I GTAC 4 cut(s) 281, 699, 816, 1144
CviAII CATG 3 cut(s) 124, 221, 1151
CviQI GTAC 4 cut(s) 281, 699, 816, 1144
DdeI CTNAG 6 cut(s) 71, 539, 833, 1281, 1477, 1577
DpnI GATC 7 cut(s) 69, 291, 999, 1037, 1218, 1333, 1527
DpnII GATC 7 cut(s) 67, 289, 997, 1035, 1216, 1331, 1525
DrdI GACNNNNNNGTC 1 cut(s) 1581
DseDI GACNNNNNNGTC 1 cut(s) 1581
Eam1104I CTCTTC 3 cut(s) 474, 581, 1389
EarI CTCTTC 3 cut(s) 474, 581, 1389
Eco130I CCWWGG 1 cut(s) 1513
Eco32I GATATC 1 cut(s) 490
Eco47I GGWCC 2 cut(s) 83, 1277
EcoO109I RGGNCCY 1 cut(s) 83
EcoRII CCWGG 1 cut(s) 798
EcoRV GATATC 1 cut(s) 490
EcoT14I CCWWGG 1 cut(s) 1513
ErhI CCWWGG 1 cut(s) 1513
FaeI CATG 3 cut(s) 127, 224, 1154
FaqI GGGAC 1 cut(s) 1075
FatI CATG 3 cut(s) 123, 220, 1150
FbaI TGATCA 2 cut(s) 1216, 1525
Fnu4HI GCNGC 3 cut(s) 405, 408, 1295
FokI GGATG 3 cut(s) 680, 794, 1454
Fsp4HI GCNGC 3 cut(s) 405, 408, 1295
FspBI CTAG 2 cut(s) 1116, 1335
GlaI GCGC 1 cut(s) 1120
GluI GCNGC 3 cut(s) 405, 408, 1295
HaeIII GGCC 2 cut(s) 829, 1518
HapII CCGG 2 cut(s) 95, 665
HgaI GACGC 1 cut(s) 309
HhaI GCGC 1 cut(s) 1121
Hin1I GRCGYC 1 cut(s) 932
Hin1II CATG 3 cut(s) 127, 224, 1154
Hin6I GCGC 1 cut(s) 1119
HinP1I GCGC 1 cut(s) 1119
HincII GTYRAC 1 cut(s) 1243
HindII GTYRAC 1 cut(s) 1243
HindIII AAGCTT 2 cut(s) 623, 1079
HinfI GANTC 7 cut(s) 23, 106, 242, 868, 909, 1172, 1178
HpaII CCGG 2 cut(s) 95, 665
HphI GGTGA 4 cut(s) 520, 788, 1081, 1435
Hpy166II GTNNAC 2 cut(s) 1243, 1486
Hpy188I TCNGA 4 cut(s) 111, 540, 937, 1177
Hpy188III TCNNGA 5 cut(s) 239, 476, 844, 1169, 1275
Hpy8I GTNNAC 2 cut(s) 1243, 1486
Hpy99I CGWCG 1 cut(s) 1250
HpyAV CCTTC 1 cut(s) 1511
HpyCH4III ACNGT 2 cut(s) 253, 1159
HpyCH4IV ACGT 5 cut(s) 134, 736, 840, 932, 1248
HpyF10VI GCNNNNNNNGC 3 cut(s) 401, 574, 1291
HpyF3I CTNAG 6 cut(s) 71, 539, 833, 1281, 1477, 1577
HpySE526I ACGT 5 cut(s) 134, 736, 840, 932, 1248
Hsp92I GRCGYC 1 cut(s) 932
Hsp92II CATG 3 cut(s) 127, 224, 1154
HspAI GCGC 1 cut(s) 1119
Ksp22I TGATCA 2 cut(s) 1216, 1525
Kzo9I GATC 7 cut(s) 67, 289, 997, 1035, 1216, 1331, 1525
LmnI GCTCC 2 cut(s) 472, 1387
Lsp1109I GCAGC 3 cut(s) 391, 394, 1281
LweI GCATC 6 cut(s) 307, 454, 658, 928, 1369, 1432
MaeI CTAG 2 cut(s) 1116, 1335
MaeII ACGT 5 cut(s) 134, 736, 840, 932, 1248
MaeIII GTNAC 4 cut(s) 178, 223, 1108, 1153
MalI GATC 7 cut(s) 69, 291, 999, 1037, 1218, 1333, 1527
MboI GATC 7 cut(s) 67, 289, 997, 1035, 1216, 1331, 1525
MboII GAAGA 9 cut(s) 299, 320, 326, 491, 535, 598, 656, 757, 1406
MflI RGATCY 3 cut(s) 289, 1035, 1331
MluCI AATT 7 cut(s) 369, 389, 433, 447, 672, 1299, 1348
MlyI GAGTC 2 cut(s) 903, 1172
MmeI TCCRAC 1 cut(s) 1380
MnlI CCTC 9 cut(s) 96, 195, 199, 415, 534, 703, 819, 1157, 1449
MseI TTAA 6 cut(s) 573, 810, 918, 951, 1371, 1557
MslI CAYNNNNRTG 2 cut(s) 739, 1067
MspCI CTTAAG 1 cut(s) 917
MspI CCGG 2 cut(s) 95, 665
MspR9I CCNGG 1 cut(s) 800
Mva1269I GAATGC 1 cut(s) 532
MvaI CCWGG 1 cut(s) 800
MvnI CGCG 1 cut(s) 581
MwoI GCNNNNNNNGC 3 cut(s) 401, 574, 1291
NdeII GATC 7 cut(s) 67, 289, 997, 1035, 1216, 1331, 1525
NlaIII CATG 3 cut(s) 127, 224, 1154
NlaIV GGNNCC 2 cut(s) 84, 443
NmeAIII GCCGAG 1 cut(s) 574
NspI RCATGY 1 cut(s) 224
OliI CACNNNNGTG 1 cut(s) 1067
PciI ACATGT 1 cut(s) 220
PcsI WCGNNNNNNNCGW 1 cut(s) 1374
PctI GAATGC 1 cut(s) 532
PfeI GAWTC 5 cut(s) 23, 106, 242, 868, 1172
PkrI GCNGC 3 cut(s) 406, 409, 1296
PleI GAGTC 2 cut(s) 903, 1172
PpsI GAGTC 2 cut(s) 903, 1172
Ppu21I YACGTR 1 cut(s) 737
PpuMI RGGWCCY 1 cut(s) 83
PscI ACATGT 1 cut(s) 220
PshBI ATTAAT 1 cut(s) 951
PsiI TTATAA 1 cut(s) 1260
Psp1406I AACGTT 1 cut(s) 134
Psp5II RGGWCCY 1 cut(s) 83
Psp6I CCWGG 1 cut(s) 798
PspGI CCWGG 1 cut(s) 798
PspN4I GGNNCC 2 cut(s) 84, 443
PspPI GGNCC 2 cut(s) 83, 1277
PspPPI RGGWCCY 1 cut(s) 83
PstI CTGCAG 1 cut(s) 1590
PsuI RGATCY 3 cut(s) 289, 1035, 1331
RsaI GTAC 4 cut(s) 282, 700, 817, 1145
RsaNI GTAC 4 cut(s) 281, 699, 816, 1144
RseI CAYNNNNRTG 2 cut(s) 739, 1067
SaqAI TTAA 6 cut(s) 573, 810, 918, 951, 1371, 1557
SatI GCNGC 3 cut(s) 405, 408, 1295
Sau3AI GATC 7 cut(s) 67, 289, 997, 1035, 1216, 1331, 1525
Sau96I GGNCC 2 cut(s) 83, 1277
SchI GAGTC 2 cut(s) 903, 1172
ScrFI CCNGG 1 cut(s) 800
SfaNI GCATC 6 cut(s) 307, 454, 658, 928, 1369, 1432
SfcI CTRYAG 2 cut(s) 1017, 1586
SinI GGWCC 2 cut(s) 83, 1277
SmiMI CAYNNNNRTG 2 cut(s) 739, 1067
SmlI CTYRAG 4 cut(s) 209, 844, 917, 1139
SmoI CTYRAG 4 cut(s) 209, 844, 917, 1139
Sse9I AATT 7 cut(s) 369, 389, 433, 447, 672, 1299, 1348
SsiI CCGC 3 cut(s) 566, 581, 857
SspI AATATT 1 cut(s) 1365
SspMI CTAG 2 cut(s) 1116, 1335
StyD4I CCNGG 1 cut(s) 798
StyI CCWWGG 1 cut(s) 1513
TaaI ACNGT 2 cut(s) 253, 1159
TaiI ACGT 5 cut(s) 137, 739, 843, 935, 1251
TaqI TCGA 1 cut(s) 1181
TasI AATT 7 cut(s) 369, 389, 433, 447, 672, 1299, 1348
TatI WGTACW 2 cut(s) 280, 698
TfiI GAWTC 5 cut(s) 23, 106, 242, 868, 1172
Tru1I TTAA 6 cut(s) 573, 810, 918, 951, 1371, 1557
Tru9I TTAA 6 cut(s) 573, 810, 918, 951, 1371, 1557
TscAI CASTG 4 cut(s) 43, 258, 730, 973
TseI GCWGC 3 cut(s) 404, 407, 1294
TspDTI ATGAA 8 cut(s) 20, 112, 327, 367, 798, 893, 1297, 1493
TspGWI ACGGA 1 cut(s) 1454
TspRI CASTG 4 cut(s) 43, 258, 730, 973
Vha464I CTTAAG 1 cut(s) 917
VpaK11BI GGWCC 2 cut(s) 83, 1277
VspI ATTAAT 1 cut(s) 951
XapI RAATTY 2 cut(s) 389, 447
XceI RCATGY 1 cut(s) 224
XcmI CCANNNNNNNNNTGG 1 cut(s) 775
XspI CTAG 2 cut(s) 1116, 1335
ZraI GACGTC 1 cut(s) 933
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.