pycom05g18110

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
OG0000079
Physical Location & Seq
Reverse (-)
21123494 .. 21124834
1341 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g18110.1

Sequence Viewer

Length: 1341 bp
ATGGATTCGAAAGCAAAACGCCAGACTCCAGGAGATAGGATCAGTAAATTACCGGACGCGATTCTCTGTCACTTACTTTCATTACTTCCAACTTTGCATGCTGTACGGAACCCGAGTTTGTCTACAAGATGGAACAACTTATGGTGTACCAGTGCTCCCATTAGCCTACAGTTTGATAGCAGAGATTTTTCTTATGCACCTCAGCAAGAAAGGAGGTTTATGAGGTTTGTTGACGGCGTAATGAAATTATGCGGCTCATCGTGCAACATTAGAAAACTATGTCTTCGTTGTCAGTCTTTCGCTTTTAAAGATGAAGATTTCTCTCGTATTCATAGATGGATATCCACTGCCATCAAGAACAATGTTATTGAACTTGATCTTTATTTTTTCAGTATTAATTATGATTTCGTCAAGAAGTTAGTTGAAATGCCTCCGAGCTTTTACGTGTGCAGATCATTGGTGTGTCTGAAGTTGGACACAAACTATATTACCTTTACATCAGGTTGTTTCCCAAGTCTCAAGTACCCCCATGTTACATCTCATAACAGTATTATCGGCGGAAGCGTAAAGATCTTTCTGAACTGCCCTGCGCTTGAAGATTTGACTGTAATTGGAAACATGGGAAGAGATGTTTTGGTAGTTAACATCTCTGCACCTCAACTGAAGACGTTAACAACAGATACTCTCGAGTGCGAGTTTTTCGTTGATGCCCAGAGACTTGAAAACCTCCATGTCAATATGAATTGGGCTTGTTTGTCGTCGAATTATGTTTCGGAGAATTCTAAATCCTTGGTCAAGGCCAAAATTCATCTCAAATATTATATGCCTCCAAAATATATGTATCAATATCCATCCTATGTTGACAATATATCTACGTTACTTGCAGGTACTTCAAGTGTTAAATATTTGACTCTTATAGTTCCTCAATATCTGGAGGCACACTATCTGCCTGAATTTGAGAATTTGAATCAACTGGAGCTAGATCTTCGTTGCTTTTGCTGGGAACTTGTAATAGATTTGCTCAAGAAATCTCCTAATCTGAAACACTTTCTCTTAAACCTTCATCGTACAGCATGGGATCGCGATTACAAGCCAGTCGATCCATCAATGCTTGTGCCAGTGTGTCTCTCGTCACACCTTAAGACTATCTCCATGCACGGATTCCACGGAGAACAGGAGGAGGTTGAAGTGCTGAAGTATTTGTTAAAGTACGGTGAGGTTTTGAATAAGATGACGATTTCTCCAAAGAATTTCGTAGGTAGTTCGGCATGTCATACAAAAGAGGAGTTGTGCAAGGAAATTTTGTTGTTTCAAAAGGGCTCAGAGACTTGCCAAGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

447

Amino Acids

51.28

Weight (kDa)

8.32

Isoelectric Point (pI)

54.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 86 - 419 1.2e-08 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 111 - 254 5.6e-07 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 372 - 413 4.4e-14 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 875
AccI GTMKAC 1 cut(s) 122
AccII CGCG 2 cut(s) 59, 1083
AciI CCGC 2 cut(s) 252, 558
AclWI GGATC 3 cut(s) 47, 1086, 1094
AcsI RAATTY 6 cut(s) 778, 804, 953, 961, 1249, 1299
AcuI CTGAAG 3 cut(s) 488, 683, 1214
AfaI GTAC 6 cut(s) 105, 148, 524, 889, 1069, 1211
AflII CTTAAG 1 cut(s) 1139
AflIII ACRYGT 1 cut(s) 444
AgsI TTSAA 9 cut(s) 371, 425, 596, 722, 894, 967, 1187, 1225, 1313
AjnI CCWGG 1 cut(s) 28
AluBI AGCT 2 cut(s) 438, 979
AluI AGCT 2 cut(s) 438, 979
Alw21I GWGCWC 1 cut(s) 157
Alw26I GTCTC 4 cut(s) 521, 709, 1130, 1319
AlwI GGATC 3 cut(s) 47, 1086, 1094
Ama87I CYCGRG 2 cut(s) 112, 686
AoxI GGCC 1 cut(s) 798
ApoI RAATTY 6 cut(s) 778, 804, 953, 961, 1249, 1299
AseI ATTAAT 1 cut(s) 396
AspLEI GCGC 1 cut(s) 592
AsuHPI GGTGA 1 cut(s) 1226
AsuII TTCGAA 1 cut(s) 8
AvaI CYCGRG 2 cut(s) 112, 686
BanII GRGCYC 1 cut(s) 1322
BbsI GAAGAC 2 cut(s) 275, 671
Bbv12I GWGCWC 1 cut(s) 157
BbvCI CCTCAGC 1 cut(s) 201
BccI CCATC 5 cut(s) 123, 330, 359, 859, 1111
BceAI ACGGC 1 cut(s) 250
BciT130I CCWGG 1 cut(s) 30
BcoDI GTCTC 4 cut(s) 521, 709, 1130, 1319
BfaI CTAG 1 cut(s) 980
BfmI CTRYAG 1 cut(s) 167
BfrI CTTAAG 1 cut(s) 1139
BfuAI ACCTGC 1 cut(s) 875
BglII AGATCT 2 cut(s) 570, 982
BisI GCNGC 1 cut(s) 253
BlsI GCNGC 1 cut(s) 254
Bme1390I CCNGG 1 cut(s) 30
BmeT110I CYCGRG 2 cut(s) 112, 686
BmiI GGNNCC 1 cut(s) 110
BmrFI CCNGG 1 cut(s) 30
BmsI GCATC 1 cut(s) 697
BpiI GAAGAC 2 cut(s) 275, 671
BpmI CTGGAG 3 cut(s) 12, 953, 995
Bpu10I CCTNAGC 1 cut(s) 201
Bpu14I TTCGAA 1 cut(s) 8
BpuEI CTTGAG 2 cut(s) 503, 1007
BsaAI YACGTR 1 cut(s) 445
BsaBI GATNNNNATC 1 cut(s) 340
BsaJI CCNNGG 2 cut(s) 789, 1165
BsaWI WCCGGW 1 cut(s) 52
BsaXI ACNNNNNCTCC 4 cut(s) 139, 169, 1225, 1255
Bse1I ACTGG 4 cut(s) 150, 978, 1094, 1118
Bse8I GATNNNNATC 1 cut(s) 340
BseBI CCWGG 1 cut(s) 30
BseDI CCNNGG 2 cut(s) 789, 1165
BseGI GGATG 1 cut(s) 851
BseJI GATNNNNATC 1 cut(s) 340
BseMII CTCAG 2 cut(s) 215, 1335
BseNI ACTGG 4 cut(s) 150, 978, 1094, 1118
BseRI GAGGAG 2 cut(s) 1193, 1298
BseYI CCCAGC 1 cut(s) 999
BsgI GTGCAG 2 cut(s) 469, 636
Bsh1236I CGCG 2 cut(s) 59, 1083
BshFI GGCC 1 cut(s) 800
BsiHKAI GWGCWC 1 cut(s) 157
BsiHKCI CYCGRG 2 cut(s) 112, 686
BsiSI CCGG 1 cut(s) 53
BsmAI GTCTC 4 cut(s) 521, 709, 1130, 1319
BsnI GGCC 1 cut(s) 800
BsoBI CYCGRG 2 cut(s) 112, 686
Bsp119I TTCGAA 1 cut(s) 8
Bsp1286I GDGCHC 2 cut(s) 157, 1322
Bsp143I GATC 7 cut(s) 39, 376, 452, 570, 982, 1078, 1099
Bsp68I TCGCGA 1 cut(s) 1083
BspACI CCGC 2 cut(s) 252, 558
BspANI GGCC 1 cut(s) 800
BspCNI CTCAG 2 cut(s) 214, 1334
BspFNI CGCG 2 cut(s) 59, 1083
BspLI GGNNCC 1 cut(s) 110
BspMI ACCTGC 1 cut(s) 875
BspPI GGATC 3 cut(s) 47, 1086, 1094
BspT104I TTCGAA 1 cut(s) 8
BspTI CTTAAG 1 cut(s) 1139
BsrI ACTGG 4 cut(s) 150, 978, 1094, 1118
BssECI CCNNGG 2 cut(s) 789, 1165
BssMI GATC 7 cut(s) 39, 376, 452, 570, 982, 1078, 1099
BssT1I CCWWGG 1 cut(s) 789
Bst2UI CCWGG 1 cut(s) 30
Bst4CI ACNGT 4 cut(s) 171, 548, 607, 1214
Bst6I CTCTTC 1 cut(s) 619
BstAFI CTTAAG 1 cut(s) 1139
BstBAI YACGTR 1 cut(s) 445
BstBI TTCGAA 1 cut(s) 8
BstC8I GCNNGC 1 cut(s) 99
BstDEI CTNAG 2 cut(s) 201, 1321
BstDSI CCRYGG 1 cut(s) 1165
BstF5I GGATG 1 cut(s) 851
BstFNI CGCG 2 cut(s) 59, 1083
BstHHI GCGC 1 cut(s) 592
BstKTI GATC 7 cut(s) 42, 379, 455, 573, 985, 1081, 1102
BstMAI GTCTC 4 cut(s) 521, 709, 1130, 1319
BstMBI GATC 7 cut(s) 39, 376, 452, 570, 982, 1078, 1099
BstMWI GCNNNNNNNGC 1 cut(s) 261
BstNI CCWGG 1 cut(s) 30
BstNSI RCATGY 2 cut(s) 101, 1272
BstSCI CCNGG 1 cut(s) 28
BstSFI CTRYAG 1 cut(s) 167
BstUI CGCG 2 cut(s) 59, 1083
BstV2I GAAGAC 2 cut(s) 275, 671
BstX2I RGATCY 2 cut(s) 570, 982
BstYI RGATCY 2 cut(s) 570, 982
BsuRI GGCC 1 cut(s) 800
BtgI CCRYGG 1 cut(s) 1165
BtsCI GGATG 1 cut(s) 851
BtsI GCAGTG 1 cut(s) 345
BtsIMutI CAGTG 3 cut(s) 157, 345, 1125
BtuMI TCGCGA 1 cut(s) 1083
BveI ACCTGC 1 cut(s) 875
Cac8I GCNNGC 1 cut(s) 99
CfoI GCGC 1 cut(s) 592
CseI GACGC 1 cut(s) 65
Csp6I GTAC 6 cut(s) 104, 147, 523, 888, 1068, 1210
CviAII CATG 7 cut(s) 98, 530, 619, 731, 1074, 1153, 1269
CviJI RGCY 8 cut(s) 165, 255, 438, 749, 800, 979, 1093, 1320
CviKI_1 RGCY 8 cut(s) 165, 255, 438, 749, 800, 979, 1093, 1320
CviQI GTAC 6 cut(s) 104, 147, 523, 888, 1068, 1210
DdeI CTNAG 2 cut(s) 201, 1321
DpnI GATC 7 cut(s) 41, 378, 454, 572, 984, 1080, 1101
DpnII GATC 7 cut(s) 39, 376, 452, 570, 982, 1078, 1099
DraI TTTAAA 1 cut(s) 307
Eam1104I CTCTTC 1 cut(s) 619
EarI CTCTTC 1 cut(s) 619
EciI GGCGGA 1 cut(s) 573
Eco130I CCWWGG 1 cut(s) 789
Eco24I GRGCYC 1 cut(s) 1322
Eco32I GATATC 1 cut(s) 342
Eco57I CTGAAG 3 cut(s) 488, 683, 1214
Eco88I CYCGRG 2 cut(s) 112, 686
EcoRI GAATTC 1 cut(s) 778
EcoRII CCWGG 1 cut(s) 28
EcoRV GATATC 1 cut(s) 342
EcoT14I CCWWGG 1 cut(s) 789
EcoT38I GRGCYC 1 cut(s) 1322
ErhI CCWWGG 1 cut(s) 789
FaeI CATG 7 cut(s) 101, 533, 622, 734, 1077, 1156, 1272
FatI CATG 7 cut(s) 97, 529, 618, 730, 1073, 1152, 1268
FblI GTMKAC 1 cut(s) 122
Fnu4HI GCNGC 1 cut(s) 253
FokI GGATG 1 cut(s) 838
FriOI GRGCYC 1 cut(s) 1322
Fsp4HI GCNGC 1 cut(s) 253
FspBI CTAG 1 cut(s) 980
GlaI GCGC 1 cut(s) 591
GluI GCNGC 1 cut(s) 253
GsaI CCCAGC 1 cut(s) 1003
GsuI CTGGAG 3 cut(s) 12, 953, 995
HaeIII GGCC 1 cut(s) 800
HapII CCGG 1 cut(s) 53
HgaI GACGC 1 cut(s) 65
HhaI GCGC 1 cut(s) 592
Hin1II CATG 7 cut(s) 101, 533, 622, 734, 1077, 1156, 1272
Hin6I GCGC 1 cut(s) 590
HinP1I GCGC 1 cut(s) 590
HincII GTYRAC 4 cut(s) 232, 643, 672, 862
HindII GTYRAC 4 cut(s) 232, 643, 672, 862
HinfI GANTC 6 cut(s) 5, 25, 61, 910, 967, 1161
HpaI GTTAAC 2 cut(s) 643, 672
HpaII CCGG 1 cut(s) 53
HphI GGTGA 1 cut(s) 1226
Hpy166II GTNNAC 6 cut(s) 123, 147, 232, 643, 672, 862
Hpy188I TCNGA 6 cut(s) 435, 468, 579, 775, 1041, 1324
Hpy188III TCNNGA 6 cut(s) 355, 412, 686, 932, 1024, 1082
Hpy8I GTNNAC 6 cut(s) 123, 147, 232, 643, 672, 862
Hpy99I CGWCG 1 cut(s) 763
HpyAV CCTTC 1 cut(s) 1070
HpyCH4III ACNGT 4 cut(s) 171, 548, 607, 1214
HpyCH4IV ACGT 3 cut(s) 444, 668, 875
HpyCH4V TGCA 8 cut(s) 97, 197, 264, 450, 653, 884, 1156, 1293
HpyF10VI GCNNNNNNNGC 1 cut(s) 261
HpyF3I CTNAG 2 cut(s) 201, 1321
HpySE526I ACGT 3 cut(s) 444, 668, 875
Hsp92II CATG 7 cut(s) 101, 533, 622, 734, 1077, 1156, 1272
HspAI GCGC 1 cut(s) 590
KspAI GTTAAC 2 cut(s) 643, 672
Kzo9I GATC 7 cut(s) 39, 376, 452, 570, 982, 1078, 1099
LmnI GCTCC 2 cut(s) 160, 976
LweI GCATC 1 cut(s) 697
MaeI CTAG 1 cut(s) 980
MaeII ACGT 3 cut(s) 444, 668, 875
MaeIII GTNAC 4 cut(s) 68, 532, 876, 1131
MalI GATC 7 cut(s) 41, 378, 454, 572, 984, 1080, 1101
MboI GATC 7 cut(s) 39, 376, 452, 570, 982, 1078, 1099
MboII GAAGA 6 cut(s) 275, 326, 608, 636, 676, 977
MflI RGATCY 2 cut(s) 570, 982
MhlI GDGCHC 2 cut(s) 157, 1322
MlyI GAGTC 2 cut(s) 19, 904
MmeI TCCRAC 2 cut(s) 113, 453
MseI TTAA 9 cut(s) 306, 396, 642, 671, 900, 1055, 1140, 1205, 1339
MslI CAYNNNNRTG 1 cut(s) 460
MspCI CTTAAG 1 cut(s) 1139
MspI CCGG 1 cut(s) 53
MspR9I CCNGG 1 cut(s) 30
MvaI CCWGG 1 cut(s) 30
MvnI CGCG 2 cut(s) 59, 1083
MwoI GCNNNNNNNGC 1 cut(s) 261
NdeII GATC 7 cut(s) 39, 376, 452, 570, 982, 1078, 1099
NlaIII CATG 7 cut(s) 101, 533, 622, 734, 1077, 1156, 1272
NlaIV GGNNCC 1 cut(s) 110
NmuCI GTSAC 2 cut(s) 68, 1131
NruI TCGCGA 1 cut(s) 1083
NspI RCATGY 2 cut(s) 101, 1272
NspV TTCGAA 1 cut(s) 8
PaeI GCATGC 1 cut(s) 101
PaeR7I CTCGAG 1 cut(s) 686
PcsI WCGNNNNNNNCGW 1 cut(s) 561
PfeI GAWTC 4 cut(s) 5, 61, 967, 1161
PfoI TCCNGGA 1 cut(s) 28
PkrI GCNGC 1 cut(s) 254
PleI GAGTC 2 cut(s) 19, 904
PpsI GAGTC 2 cut(s) 19, 904
Ppu21I YACGTR 1 cut(s) 445
PshBI ATTAAT 1 cut(s) 396
Psp6I CCWGG 1 cut(s) 28
PspFI CCCAGC 1 cut(s) 999
PspGI CCWGG 1 cut(s) 28
PspN4I GGNNCC 1 cut(s) 110
PsuI RGATCY 2 cut(s) 570, 982
RruI TCGCGA 1 cut(s) 1083
RsaI GTAC 6 cut(s) 105, 148, 524, 889, 1069, 1211
RsaNI GTAC 6 cut(s) 104, 147, 523, 888, 1068, 1210
RseI CAYNNNNRTG 1 cut(s) 460
SaqAI TTAA 9 cut(s) 306, 396, 642, 671, 900, 1055, 1140, 1205, 1339
SatI GCNGC 1 cut(s) 253
Sau3AI GATC 7 cut(s) 39, 376, 452, 570, 982, 1078, 1099
SchI GAGTC 2 cut(s) 19, 904
ScrFI CCNGG 1 cut(s) 30
SduI GDGCHC 2 cut(s) 157, 1322
SfaNI GCATC 1 cut(s) 697
SfcI CTRYAG 1 cut(s) 167
Sfr274I CTCGAG 1 cut(s) 686
SfuI TTCGAA 1 cut(s) 8
SlaI CTCGAG 1 cut(s) 686
SmiMI CAYNNNNRTG 1 cut(s) 460
SmlI CTYRAG 4 cut(s) 518, 686, 1022, 1139
SmoI CTYRAG 4 cut(s) 518, 686, 1022, 1139
SphI GCATGC 1 cut(s) 101
SsiI CCGC 2 cut(s) 252, 558
SspI AATATT 2 cut(s) 818, 905
SspMI CTAG 1 cut(s) 980
StyD4I CCNGG 1 cut(s) 28
StyI CCWWGG 1 cut(s) 789
TaaI ACNGT 4 cut(s) 171, 548, 607, 1214
TaiI ACGT 3 cut(s) 447, 671, 878
TaqI TCGA 4 cut(s) 8, 687, 761, 1098
TauI GCSGC 1 cut(s) 255
TfiI GAWTC 4 cut(s) 5, 61, 967, 1161
Tru1I TTAA 9 cut(s) 306, 396, 642, 671, 900, 1055, 1140, 1205, 1339
Tru9I TTAA 9 cut(s) 306, 396, 642, 671, 900, 1055, 1140, 1205, 1339
TscAI CASTG 3 cut(s) 157, 352, 1125
TseFI GTSAC 2 cut(s) 68, 1131
Tsp45I GTSAC 2 cut(s) 68, 1131
TspDTI ATGAA 7 cut(s) 69, 257, 320, 327, 755, 797, 1052
TspGWI ACGGA 3 cut(s) 121, 1173, 1182
TspRI CASTG 3 cut(s) 157, 352, 1125
Vha464I CTTAAG 1 cut(s) 1139
VspI ATTAAT 1 cut(s) 396
XapI RAATTY 6 cut(s) 778, 804, 953, 961, 1249, 1299
XceI RCATGY 2 cut(s) 101, 1272
XhoI CTCGAG 1 cut(s) 686
XmiI GTMKAC 1 cut(s) 122
XspI CTAG 1 cut(s) 980
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.