Rroxscaffold_3G00258110

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000079
Physical Location & Seq
Reverse (-)
52441011 .. 52443461
2451 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00258110.1

Sequence Viewer

Length: 1455 bp
ATGGCTTCAAAATCAAAGCTTCAAAAATCAAGCATTGAAGATAGGATTAGTGGGTTGCCGGATGCAATTCTTTGCCATATACTTTCCTGTTGTACTACAAGAGAGGCTGTGCAGACCAGTGTTTTATCACGTAGATGGAAGAATGTGTGGGCTTCTGTTCCCAGTTTAGATTTGGATGAACAAAAATATCACCTGGATTATGTTAATCGTACTTTACCAGGGCCACTAAGATACGTCTTGAGTAGTTTTCCACAGTTTGTGAATCGTCTACTTTTGTTACGAAGCCCCACTGACATTCATAGATTCCATCTGAAGACTACTATGACGTCTGATGCTTCTCTTATTTATGCTTGGATTTCCACTGCCGTAAAGCATAATGTTGTGGAACTTGATCTTTGTGTGGAGACACCTACAGGGCCACATTTTGAGATCCCCAAAAGTGTTTTTTTGTGCAACACATTGGTGAGTTTGAAGCTGTGGCTGTCCCAAGATGTTAGTGCTGTTACTCCTAGTGCAAAATGTTTCCCGTGTCTCAAGTACCTCCATGTTACAGTTTGGTGTCCTGATTCTGACTCGATGGAGAAGCTCTTTTCTTGTTGCCCTGCACTTGAACATTTGATTATAGATGGACAAGTTGACGACGTTTTGGCTTATAATATCAACATCTCTGGACCTAAGCTGAAAAGACTGCAAATTAGCTTCATTGTCCATAAGTTTGATACAAGATCTAGTAATGTTGTAAATTATGAGTGCCAAATATTCGTTAATGCCGATGCTCCATACCTTGAAGAGTTGGATATATACTATGACTTTTTGGTGAGCTATTCTTTGACGGATGCCAAATCTATGAGGAAAGCCAAGATAGATTTCTTAGATGTGGACGAGCTTGACAACCTTCATTGTTTCCTTGGCCTTGCTGATCGTGTGCGCAGGCTCTTTGCAGAAAGTTTTAATGTTAAATATCTGTCAGTTTCAGCTGCAATCTTGGGGGCTCTTGGCATTAAAGATCAACATCTTTTGCCTACCTTTGATAATTTGAAGCAATTGGAGCTACAACTTCAAACGTGTTGCTGTTTGCGATCACTGCCAACTTTGCTCAAGCTATCACCGAATTTGGAACATCTTGTGTTTGAAAATAACACCAAATTTTGTGCTTATGACAATGAGGATGAGCTTGTACATGAATGGGATGCGCCAGAGTTTGTGCCTGTTTGTTTGTTTTCACACCTCAAGACTATTTGCCTACGGGAGTTCAAGGGGTGTCCAAATGAGATGGAAGTGGCAAAGTACCTGGTGAAGCACGGCAAGGCTTTGAATAAGGTGACTATTTATACTCGCTTTTGTGAAGAAAAAGAGATGAAGTTACAGCCTCCTATTGCCTCCTTGTGCTTGGAAATTTCCAAGTTCCCTAGGGGTTCAAAGACTTGTGAAATTGGTTTTCTGACTTTTACCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

484

Amino Acids

55.14

Weight (kDa)

6.32

Isoelectric Point (pI)

45.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 16 - 55 2.2e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 98 - 449 2.7e-07 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 117 - 275 1.2e-15 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 399 - 443 4e-14 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 654
AatII GACGTC 1 cut(s) 329
Acc16I TGCGCA 1 cut(s) 929
AccI GTMKAC 1 cut(s) 268
AclWI GGATC 1 cut(s) 424
AcsI RAATTY 3 cut(s) 1111, 1145, 1395
AcuI CTGAAG 1 cut(s) 332
AcyI GRCGYC 1 cut(s) 326
AfaI GTAC 5 cut(s) 94, 211, 539, 1179, 1289
AflIII ACRYGT 1 cut(s) 1064
AjnI CCWGG 3 cut(s) 192, 217, 1290
AjuI GAANNNNNNNTTGG 2 cut(s) 851, 883
AleI CACNNNNGTG 1 cut(s) 461
Alw26I GTCTC 2 cut(s) 398, 536
AlwI GGATC 1 cut(s) 424
AoxI GGCC 3 cut(s) 221, 416, 910
ApeKI GCWGC 1 cut(s) 977
ApoI RAATTY 3 cut(s) 1111, 1145, 1395
AspA2I CCTAGG 1 cut(s) 1409
AspLEI GCGC 2 cut(s) 930, 1195
AspS9I GGNCC 3 cut(s) 221, 416, 671
AsuHPI GGTGA 6 cut(s) 182, 475, 829, 1098, 1306, 1333
AvaII GGWCC 1 cut(s) 671
AvrII CCTAGG 1 cut(s) 1409
BanII GRGCYC 1 cut(s) 994
BbsI GAAGAC 1 cut(s) 320
BbvI GCAGC 1 cut(s) 964
BccI CCATC 5 cut(s) 129, 315, 571, 620, 1267
BceAI ACGGC 2 cut(s) 350, 1318
BciT130I CCWGG 3 cut(s) 194, 219, 1292
BcoDI GTCTC 2 cut(s) 398, 536
BfaI CTAG 4 cut(s) 510, 729, 1410, 1453
BfmI CTRYAG 1 cut(s) 411
BglII AGATCT 1 cut(s) 725
BisI GCNGC 1 cut(s) 978
BlnI CCTAGG 1 cut(s) 1409
BlsI GCNGC 1 cut(s) 979
Bme1390I CCNGG 3 cut(s) 194, 219, 1292
Bme18I GGWCC 1 cut(s) 671
BmgT120I GGNCC 3 cut(s) 221, 416, 671
BmrFI CCNGG 3 cut(s) 194, 219, 1292
BmrI ACTGGG 1 cut(s) 156
BmsI GCATC 5 cut(s) 52, 322, 763, 826, 1180
BmuI ACTGGG 1 cut(s) 156
BpiI GAAGAC 1 cut(s) 320
Bpu10I CCTNAGC 1 cut(s) 675
BpuEI CTTGAG 4 cut(s) 259, 518, 1082, 1214
BsaAI YACGTR 1 cut(s) 131
BsaBI GATNNNNATC 1 cut(s) 1011
BsaHI GRCGYC 1 cut(s) 326
BsaJI CCNNGG 3 cut(s) 218, 907, 1409
Bse1I ACTGG 2 cut(s) 117, 162
Bse8I GATNNNNATC 1 cut(s) 1011
BseBI CCWGG 3 cut(s) 194, 219, 1292
BseDI CCNNGG 3 cut(s) 218, 907, 1409
BseGI GGATG 5 cut(s) 67, 181, 841, 1174, 1195
BseJI GATNNNNATC 1 cut(s) 1011
BseNI ACTGG 2 cut(s) 117, 162
BseXI GCAGC 1 cut(s) 964
BsgI GTGCAG 2 cut(s) 131, 588
BshFI GGCC 3 cut(s) 223, 418, 912
BsiSI CCGG 1 cut(s) 59
BslFI GGGAC 1 cut(s) 469
BsmAI GTCTC 2 cut(s) 398, 536
BsmFI GGGAC 1 cut(s) 469
BsnI GGCC 3 cut(s) 223, 418, 912
Bsp1286I GDGCHC 1 cut(s) 994
Bsp1407I TGTACA 1 cut(s) 1177
Bsp143I GATC 6 cut(s) 391, 429, 725, 919, 1006, 1079
BspANI GGCC 3 cut(s) 223, 418, 912
BspPI GGATC 1 cut(s) 424
BsrGI TGTACA 1 cut(s) 1177
BsrI ACTGG 2 cut(s) 117, 162
BssECI CCNNGG 3 cut(s) 218, 907, 1409
BssMI GATC 6 cut(s) 391, 429, 725, 919, 1006, 1079
BssNI GRCGYC 1 cut(s) 326
BssT1I CCWWGG 2 cut(s) 907, 1409
Bst2UI CCWGG 3 cut(s) 194, 219, 1292
Bst4CI ACNGT 2 cut(s) 255, 553
Bst6I CTCTTC 1 cut(s) 783
BstACI GRCGYC 1 cut(s) 326
BstAUI TGTACA 1 cut(s) 1177
BstBAI YACGTR 1 cut(s) 131
BstC8I GCNNGC 1 cut(s) 932
BstDEI CTNAG 3 cut(s) 227, 675, 871
BstF5I GGATG 5 cut(s) 67, 181, 841, 1174, 1195
BstHHI GCGC 2 cut(s) 930, 1195
BstKTI GATC 6 cut(s) 394, 432, 728, 922, 1009, 1082
BstMAI GTCTC 2 cut(s) 398, 536
BstMBI GATC 6 cut(s) 391, 429, 725, 919, 1006, 1079
BstMWI GCNNNNNNNGC 3 cut(s) 1048, 1084, 1093
BstNI CCWGG 3 cut(s) 194, 219, 1292
BstSCI CCNGG 3 cut(s) 192, 217, 1290
BstSFI CTRYAG 1 cut(s) 411
BstV1I GCAGC 1 cut(s) 964
BstV2I GAAGAC 1 cut(s) 320
BstX2I RGATCY 2 cut(s) 429, 725
BstYI RGATCY 2 cut(s) 429, 725
BsuRI GGCC 3 cut(s) 223, 418, 912
BtsCI GGATG 5 cut(s) 67, 181, 841, 1174, 1195
BtsI GCAGTG 2 cut(s) 360, 1082
BtsIMutI CAGTG 4 cut(s) 124, 288, 360, 1082
Cac8I GCNNGC 1 cut(s) 932
CfoI GCGC 2 cut(s) 930, 1195
Cfr13I GGNCC 3 cut(s) 221, 416, 671
CsiI ACCWGGT 1 cut(s) 1290
Csp6I GTAC 5 cut(s) 93, 210, 538, 1178, 1288
CviAII CATG 2 cut(s) 545, 1181
CviQI GTAC 5 cut(s) 93, 210, 538, 1178, 1288
DdeI CTNAG 3 cut(s) 227, 675, 871
DpnI GATC 6 cut(s) 393, 431, 727, 921, 1008, 1081
DpnII GATC 6 cut(s) 391, 429, 725, 919, 1006, 1079
Eam1104I CTCTTC 1 cut(s) 783
EarI CTCTTC 1 cut(s) 783
Eco130I CCWWGG 2 cut(s) 907, 1409
Eco24I GRGCYC 1 cut(s) 994
Eco47I GGWCC 1 cut(s) 671
Eco57I CTGAAG 1 cut(s) 332
EcoRII CCWGG 3 cut(s) 192, 217, 1290
EcoT14I CCWWGG 2 cut(s) 907, 1409
EcoT38I GRGCYC 1 cut(s) 994
ErhI CCWWGG 2 cut(s) 907, 1409
FaeI CATG 2 cut(s) 548, 1184
FaqI GGGAC 1 cut(s) 469
FatI CATG 2 cut(s) 544, 1180
FblI GTMKAC 1 cut(s) 268
Fnu4HI GCNGC 1 cut(s) 978
FokI GGATG 5 cut(s) 74, 188, 848, 1181, 1202
FriOI GRGCYC 1 cut(s) 994
Fsp4HI GCNGC 1 cut(s) 978
FspBI CTAG 4 cut(s) 510, 729, 1410, 1453
FspI TGCGCA 1 cut(s) 929
GlaI GCGC 2 cut(s) 929, 1194
GluI GCNGC 1 cut(s) 978
HaeIII GGCC 3 cut(s) 223, 418, 912
HapII CCGG 1 cut(s) 59
HhaI GCGC 2 cut(s) 930, 1195
Hin1I GRCGYC 1 cut(s) 326
Hin1II CATG 2 cut(s) 548, 1184
Hin6I GCGC 2 cut(s) 928, 1193
HinP1I GCGC 2 cut(s) 928, 1193
HincII GTYRAC 1 cut(s) 637
HindII GTYRAC 1 cut(s) 637
HindIII AAGCTT 1 cut(s) 17
HinfI GANTC 4 cut(s) 262, 303, 566, 572
HpaII CCGG 1 cut(s) 59
HphI GGTGA 6 cut(s) 182, 475, 829, 1098, 1306, 1333
Hpy166II GTNNAC 3 cut(s) 269, 637, 880
Hpy188I TCNGA 4 cut(s) 312, 331, 571, 1443
Hpy188III TCNNGA 4 cut(s) 238, 563, 669, 1231
Hpy8I GTNNAC 3 cut(s) 269, 637, 880
Hpy99I CGWCG 1 cut(s) 644
HpyAV CCTTC 1 cut(s) 905
HpyCH4III ACNGT 2 cut(s) 255, 553
HpyCH4IV ACGT 5 cut(s) 130, 234, 326, 642, 1064
HpyCH4V TGCA 8 cut(s) 65, 112, 453, 515, 605, 691, 941, 980
HpyF10VI GCNNNNNNNGC 3 cut(s) 1048, 1084, 1093
HpyF3I CTNAG 3 cut(s) 227, 675, 871
HpySE526I ACGT 5 cut(s) 130, 234, 326, 642, 1064
Hsp92I GRCGYC 1 cut(s) 326
Hsp92II CATG 2 cut(s) 548, 1184
HspAI GCGC 2 cut(s) 928, 1193
Kzo9I GATC 6 cut(s) 391, 429, 725, 919, 1006, 1079
LmnI GCTCC 2 cut(s) 781, 1048
Lsp1109I GCAGC 1 cut(s) 964
LweI GCATC 5 cut(s) 52, 322, 763, 826, 1180
MabI ACCWGGT 1 cut(s) 1290
MaeI CTAG 4 cut(s) 510, 729, 1410, 1453
MaeII ACGT 5 cut(s) 130, 234, 326, 642, 1064
MaeIII GTNAC 5 cut(s) 276, 502, 547, 1321, 1362
MalI GATC 6 cut(s) 393, 431, 727, 921, 1008, 1081
MboI GATC 6 cut(s) 391, 429, 725, 919, 1006, 1079
MboII GAAGA 5 cut(s) 50, 151, 325, 800, 1358
MfeI CAATTG 1 cut(s) 1043
MflI RGATCY 2 cut(s) 429, 725
MhlI GDGCHC 1 cut(s) 994
MluCI AATT 9 cut(s) 66, 693, 742, 1033, 1043, 1111, 1145, 1395, 1431
MlyI GAGTC 1 cut(s) 566
MmeI TCCRAC 1 cut(s) 774
MnlI CCTC 7 cut(s) 97, 551, 843, 1159, 1238, 1380, 1390
MseI TTAA 5 cut(s) 204, 765, 951, 957, 1002
MslI CAYNNNNRTG 2 cut(s) 133, 461
MspA1I CMGCKG 1 cut(s) 977
MspI CCGG 1 cut(s) 59
MspR9I CCNGG 3 cut(s) 194, 219, 1292
MunI CAATTG 1 cut(s) 1043
MvaI CCWGG 3 cut(s) 194, 219, 1292
MwoI GCNNNNNNNGC 3 cut(s) 1048, 1084, 1093
NdeII GATC 6 cut(s) 391, 429, 725, 919, 1006, 1079
NlaIII CATG 2 cut(s) 548, 1184
NmuCI GTSAC 1 cut(s) 1321
NsbI TGCGCA 1 cut(s) 929
OliI CACNNNNGTG 1 cut(s) 461
PcsI WCGNNNNNNNCGW 1 cut(s) 768
PfeI GAWTC 3 cut(s) 262, 303, 566
PkrI GCNGC 1 cut(s) 979
PleI GAGTC 1 cut(s) 566
PpsI GAGTC 1 cut(s) 566
Ppu21I YACGTR 1 cut(s) 131
PsiI TTATAA 1 cut(s) 654
Psp6I CCWGG 3 cut(s) 192, 217, 1290
PspGI CCWGG 3 cut(s) 192, 217, 1290
PspPI GGNCC 3 cut(s) 221, 416, 671
PsuI RGATCY 2 cut(s) 429, 725
PvuII CAGCTG 1 cut(s) 977
RsaI GTAC 5 cut(s) 94, 211, 539, 1179, 1289
RsaNI GTAC 5 cut(s) 93, 210, 538, 1178, 1288
RseI CAYNNNNRTG 2 cut(s) 133, 461
SaqAI TTAA 5 cut(s) 204, 765, 951, 957, 1002
SatI GCNGC 1 cut(s) 978
Sau3AI GATC 6 cut(s) 391, 429, 725, 919, 1006, 1079
Sau96I GGNCC 3 cut(s) 221, 416, 671
SchI GAGTC 1 cut(s) 566
ScrFI CCNGG 3 cut(s) 194, 219, 1292
SduI GDGCHC 1 cut(s) 994
SexAI ACCWGGT 1 cut(s) 1290
SfaNI GCATC 5 cut(s) 52, 322, 763, 826, 1180
SfcI CTRYAG 1 cut(s) 411
SinI GGWCC 1 cut(s) 671
SmiMI CAYNNNNRTG 2 cut(s) 133, 461
SmlI CTYRAG 4 cut(s) 238, 533, 1097, 1229
SmoI CTYRAG 4 cut(s) 238, 533, 1097, 1229
Sse9I AATT 9 cut(s) 66, 693, 742, 1033, 1043, 1111, 1145, 1395, 1431
SspI AATATT 1 cut(s) 759
SspMI CTAG 4 cut(s) 510, 729, 1410, 1453
StyD4I CCNGG 3 cut(s) 192, 217, 1290
StyI CCWWGG 2 cut(s) 907, 1409
TaaI ACNGT 2 cut(s) 255, 553
TaiI ACGT 5 cut(s) 133, 237, 329, 645, 1067
TaqI TCGA 1 cut(s) 575
TasI AATT 9 cut(s) 66, 693, 742, 1033, 1043, 1111, 1145, 1395, 1431
TatI WGTACW 2 cut(s) 92, 1177
TfiI GAWTC 3 cut(s) 262, 303, 566
Tru1I TTAA 5 cut(s) 204, 765, 951, 957, 1002
Tru9I TTAA 5 cut(s) 204, 765, 951, 957, 1002
TscAI CASTG 4 cut(s) 124, 295, 367, 1089
TseFI GTSAC 1 cut(s) 1321
TseI GCWGC 1 cut(s) 977
Tsp45I GTSAC 1 cut(s) 1321
TspDTI ATGAA 6 cut(s) 192, 287, 691, 887, 1197, 1373
TspGWI ACGGA 1 cut(s) 848
TspRI CASTG 4 cut(s) 124, 295, 367, 1089
VpaK11BI GGWCC 1 cut(s) 671
XapI RAATTY 3 cut(s) 1111, 1145, 1395
XcmI CCANNNNNNNNNTGG 1 cut(s) 169
XmaJI CCTAGG 1 cut(s) 1409
XmiI GTMKAC 1 cut(s) 268
XspI CTAG 4 cut(s) 510, 729, 1410, 1453
ZraI GACGTC 1 cut(s) 327
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.