Rroxscaffold_2G00127930

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000079
Physical Location & Seq
Forward (+)
63485355 .. 63488322
2968 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00127930.1

Sequence Viewer

Length: 1413 bp
ATGGATCAAAGGCTTCCTAAATTGACCAGGGTAGAAATGGTTTCCGAGTCAAAGCAACAGCATGGAGTTGATAGGATTAGTGAATTGCCTGATGGAGTTCTTTGTCACATACTATCGTTTCTTCCGACAATAGATGTTGTGCGGACCACCATTTTGTCAGCAAGATGGAAGAACATATGGACTTCTGTTTGCAATCTAGACTTCTCCGACCAAGATTTTCCTCCAACTTGGATCTCCTCTGATCGTTTTGTGACATTTATTGATCGCACACTTTCCTTGCACTCCTCATCAGACACACAGAAATTTCGAATAAAGCAAAGCAGGGTTTCGTATTTCAGTGACGAGGATTTCTCTCGTTTTGAAGGCTGGATTTGCACTGCGATCAGGCATAATGTTGTTGACCTGAATCTTTTTGTTGGTGTTGAAGATTACTTGGAACTTAAATACAAAATGCCTCAAAGCCTTTTCCTGAGCAAGACTTTGGTGAGTTTGAAGCTGTTTGAAAGTTGTTTTAGCTATGTTCCTCCTATGACAGGGTGTTTCCCAAGTCTCAAGTTCCTATCTGCTGCGTTTGTTTTTCCTGATACTCAATCAATGGAAAATCTCTTTTCTCATTGCCCTGTACTTGAAGATTTGACTATATTGGCATCCCTTGGAGATCAGGACAATTTAAGTGTCAATATATTTACACCTGAATTGAAGAAATTATCAATAAATTTGCACACTTATTCGATTGAGGGCAAAGATCGTCTGTCCAGTTGCATTATTAATGCCCCAAAGCTGGAAACCCTTTATCTCAAGATGGATGGTTTGACATATTACTTTCTGGAGAAGGCACATTTTCTAGCCCAGGCCAGACTTGAGTTCAATGACAGATGTAAAGATAACCCTGCTTTTGCTGACCATGCAATCAAGTTATTGGGAGGAATTTCCAGTGTTCAAGAGCTGTTGCTTTCAGTTTATTCTTTGGAGGTTTATTCTCTGCCTAATTTTAATAATTTGACCACATTGGAGCTGGCTCTTCAAGAATCTCAGTACTGGGAATTGCTGATAGAAATGCTGAAGAGATCACCTAATTTGGAATGTCTTGAGTTATGCTATGATGGTGTTACATGGCGTGAAGAATATGGAGATCAATGGAATCCAGTCAATCCACCAGAGTTGGTTCCTACTTGTCTCTCATCACACCTCACCAGCATCTCAATATGGGAATTCAAAGGACAGCTAGATGAGATGGAAGTGGTAAAGTACTTGTTACAGAATGGTGTAGTTTTGAAGAAGATGAATATTTTTACTGAATTAAATTCTGAAGGTCTTTTATATTCCTTGGATGAGTTACGGAAGGAGTTTTCAGTGTTTCCAAAGGGTTCAAAGGACTGTCGAGTCATAATAGAAGACTTGAGAAAATTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

470

Amino Acids

54.11

Weight (kDa)

5.08

Isoelectric Point (pI)

46.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 26 - 65 2.1e-08 F-box domain
LRR_At1g61320_AtMIF1 PF23622 91 - 430 1.5e-12 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 121 - 269 3.7e-12 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 386 - 430 4.8e-12 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000079)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32020
fragaria_vesca FvH4_2g37070 FvH4_3g17062 FvH4_3g17580 FvH4_3g17580 FvH4_3g17580 FvH4_3g17581 FvH4_3g18162 FvH4_3g20210 FvH4_3g32940 FvH4_3g33370 FvH4_3g33390 FvH4_3g33400 FvH4_3g33400 FvH4_3g33400 FvH4_3g33401 FvH4_3g33430 FvH4_4g00640 FvH4_5g02210 FvH4_5g02220 FvH4_5g02220 FvH4_5g02221 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02230 FvH4_5g02280 FvH4_5g02290 FvH4_5g02290 FvH4_5g08740 FvH4_5g24470 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g07500 FvH4_6g08520 FvH4_6g10000 FvH4_7g28000 FvH4_7g28011 FvH4_7g28030 FvH4_7g28040 FvH4_7g28042
malus_domestica MD03G1112000.v1.1 MD03G1112100.v1.1 MD03G1112200.v1.1 MD03G1253000.v1.1 MD03G1253100.v1.1 MD03G1253400.v1.1 MD03G1255400.v1.1 MD03G1276300.v1.1 MD03G1276400.v1.1 MD05G1193700.v1.1 MD11G1265000.v1.1 MD11G1265100.v1.1 MD11G1265300.v1.1 MD11G1275400.v1.1 MD11G1275600.v1.1
prunus_persica Prupe.4G151700_v2.0.a1 Prupe.4G160800_v2.0.a1 Prupe.4G160900_v2.0.a1 Prupe.4G161000_v2.0.a1 Prupe.4G161100_v2.0.a1 Prupe.4G161200_v2.0.a1 Prupe.4G161300_v2.0.a1 Prupe.5G021800_v2.0.a1
pyrus_communis pycom03g06140 pycom03g19340 pycom03g20150 pycom03g20210 pycom05g18110 pycom11g23320 pycom11g24360 pycom11g24380
rosa_chinensis RchiOBHm_Chr1g0321391 RchiOBHm_Chr1g0363171 RchiOBHm_Chr1g0363181 RchiOBHm_Chr2g0115721 RchiOBHm_Chr3g0458571 RchiOBHm_Chr3g0460681 RchiOBHm_Chr4g0387591 RchiOBHm_Chr5g0028191 RchiOBHm_Chr5g0028201 RchiOBHm_Chr5g0028241 RchiOBHm_Chr5g0028261 RchiOBHm_Chr5g0028411 RchiOBHm_Chr5g0028431 RchiOBHm_Chr5g0029291 RchiOBHm_Chr5g0030601 RchiOBHm_Chr5g0030631 RchiOBHm_Chr5g0059941 RchiOBHm_Chr5g0059951 RchiOBHm_Chr5g0059961 RchiOBHm_Chr5g0060061 RchiOBHm_Chr5g0060761 RchiOBHm_Chr5g0060771 RchiOBHm_Chr6g0304711 RchiOBHm_Chr7g0192751 RchiOBHm_Chr7g0197861 RchiOBHm_Chr7g0197881 RchiOBHm_Chr7g0197891 RchiOBHm_Chr7g0197921
rosa_laevigata RLG00000003903 RLG00000003904 RLG00000004332 RLG00000010109 RLG00000010957 RLG00000018203 RLG00000024989 RLG00000025147 RLG00000027586 RLG00000030426 RLG00000033074 RLG00000033075 RLG00000033076 RLG00000033094 RLG00000033150 RLG00000033234 RLG00000035345 RLG00000035399
rosa_multiflora Rmu_co8271835.1_g000001 Rmu_co8353127.1_g000001 Rmu_co8434667.1_g000001 Rmu_co8434713.1_g000001 Rmu_co8441243.1_g000001 Rmu_co8501607.1_g000001 Rmu_sc0000471.1_g000010 Rmu_sc0000724.1_g000008 Rmu_sc0000727.1_g000033 Rmu_sc0000814.1_g000032 Rmu_sc0000960.1_g000003 Rmu_sc0001082.1_g000014 Rmu_sc0001082.1_g000016 Rmu_sc0001571.1_g000005 Rmu_sc0001571.1_g000007 Rmu_sc0001571.1_g000008 Rmu_sc0001571.1_g000020 Rmu_sc0002040.1_g000017 Rmu_sc0002925.1_g000003 Rmu_sc0003864.1_g000006 Rmu_sc0005482.1_g000001 Rmu_sc0005482.1_g000005 Rmu_sc0006771.1_g000006 Rmu_sc0007143.1_g000008 Rmu_sc0007248.1_g000006 Rmu_sc0011593.1_g000004 Rmu_sc0011593.1_g000006 Rmu_sc0011593.1_g000007 Rmu_sc0011593.1_g000012 Rmu_sc0016104.1_g000007 Rmu_sc0022819.1_g000001 Rmu_sc0025685.1_g000002 Rmu_sc0027256.1_g000002 Rmu_sc0034563.1_g000001 Rmu_sc0034642.1_g000001 Rmu_ssc0000197.1_g000059
rosa_roxburghii Rroxscaffold_1G00019950 Rroxscaffold_1G00020580 Rroxscaffold_1G00051250 Rroxscaffold_1G00051270 Rroxscaffold_1G00051470 Rroxscaffold_1G00051480 Rroxscaffold_2G00127930 Rroxscaffold_2G00128790 Rroxscaffold_3G00258110 Rroxscaffold_3G00258130 Rroxscaffold_6G00419310 Rroxscaffold_6G00420970 Rroxscaffold_6G00421360 Rroxscaffold_7G00163570
rosa_rugosa Rorug01G0032500 Rorug02G0199500.1 Rorug02G0199600.1 Rorug03G0024200 Rorug03G0029800 Rorug03G0029900 Rorug03G0045000 Rorug03G0045000 Rorug03G0310900 Rorug05G0104800 Rorug05G0104900 Rorug05G0105000 Rorug05G0105100 Rorug05G0105200 Rorug05G0105300 Rorug05G0107400 Rorug05G0107600 Rorug05G0112900 Rorug05G0118900 Rorug05G0327000 Rorug05G0327000 Rorug05G0327000 Rorug05G0328000 Rorug05G0333900 Rorug06G0333700 Rorug07G0004400 Rorug07G0044100 Rorug07G0044200 Rorug07G0044200 Rorug07G0044300 Rorug07G0044400
rosa_samantha Rh1AG314000 Rh1BG277500 Rh1CG293900 Rh1DG051800 Rh1DG308100 Rh1DG308200 Rh2AG256700 Rh2AG295900 Rh2BG267300 Rh2CG262300 Rh2DG265100 Rh2DG319900 Rh3AG084700 Rh3AG088100 Rh3AG102600 Rh3BG087500 Rh3CG088000 Rh3CG091300 Rh3CG108200 Rh3DG088400 Rh4AG017000 Rh4CG018100 Rh4DG012700 Rh5AG198100 Rh5AG198200 Rh5AG198300 Rh5AG198500 Rh5AG198600 Rh5AG198700 Rh5AG200400 Rh5AG205000 Rh5AG211100 Rh5AG244900 Rh5AG391100 Rh5AG391200 Rh5AG396500 Rh5BG197000 Rh5BG197100 Rh5BG197200 Rh5BG197300 Rh5BG198600 Rh5BG198800 Rh5BG403400 Rh5BG403500 Rh5CG216700 Rh5CG216900 Rh5CG217000 Rh5CG218500 Rh5CG225000 Rh5CG427400 Rh5CG427500 Rh5CG433300 Rh5DG198400 Rh5DG198500 Rh5DG198800 Rh5DG198900 Rh5DG199000 Rh5DG200700 Rh5DG201000 Rh5DG207200 Rh5DG215000 Rh5DG374300 Rh5DG419000 Rh5DG419100 Rh5DG420200 Rh5DG423900 Rh6BG456100 Rh6CG458700 Rh7AG129400 Rh7AG168100 Rh7AG457700 Rh7BG170900 Rh7CG177400 Rh7CG177500 Rh7DG131600 Rh7DG169800 Rh7DG169900 Rh7DG170000 Rh7DG170100
rosa_wichuraiana Rw1G027820 Rw2G020090 Rw3G007530 Rw3G008730 Rw4G001080 Rw5G018080 Rw5G018090 Rw5G018100 Rw5G018110 Rw5G018120 Rw5G018640 Rw5G019310 Rw5G036810 Rw5G036820 Rw5G036830 Rw5G037390 Rw6G038770 Rw7G011070 Rw7G014650 Rw7G014660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1382
AciI CCGC 1 cut(s) 142
AclWI GGATC 2 cut(s) 12, 239
AcsI RAATTY 5 cut(s) 302, 715, 927, 1211, 1303
AcuI CTGAAG 2 cut(s) 1082, 1329
AfaI GTAC 3 cut(s) 624, 1037, 1250
AfiI CCNNNNNNNGG 2 cut(s) 533, 781
AjnI CCWGG 2 cut(s) 26, 849
AluBI AGCT 6 cut(s) 496, 516, 781, 946, 1015, 1225
AluI AGCT 6 cut(s) 496, 516, 781, 946, 1015, 1225
Alw26I GTCTC 2 cut(s) 554, 1181
AlwI GGATC 2 cut(s) 12, 239
AoxI GGCC 1 cut(s) 852
ApeKI GCWGC 1 cut(s) 566
ApoI RAATTY 5 cut(s) 302, 715, 927, 1211, 1303
ArsI GACNNNNNNTTYG 2 cut(s) 136, 168
AseI ATTAAT 1 cut(s) 768
AspS9I GGNCC 1 cut(s) 144
AsuHPI GGTGA 3 cut(s) 496, 1062, 1183
AsuII TTCGAA 1 cut(s) 307
AvaII GGWCC 1 cut(s) 144
BbsI GAAGAC 1 cut(s) 1401
BbvI GCAGC 1 cut(s) 553
BccI CCATC 6 cut(s) 86, 159, 796, 800, 1097, 1228
BciT130I CCWGG 2 cut(s) 28, 851
BcoDI GTCTC 2 cut(s) 554, 1181
BfaI CTAG 3 cut(s) 197, 845, 1226
BisI GCNGC 1 cut(s) 567
BlsI GCNGC 1 cut(s) 568
BmcAI AGTACT 2 cut(s) 1037, 1250
Bme1390I CCNGG 2 cut(s) 28, 851
Bme18I GGWCC 1 cut(s) 144
BmgT120I GGNCC 1 cut(s) 144
BmiI GGNNCC 1 cut(s) 1167
BmrFI CCNGG 2 cut(s) 28, 851
BmrI ACTGGG 1 cut(s) 1048
BmsI GCATC 2 cut(s) 656, 1206
BmuI ACTGGG 1 cut(s) 1048
BpiI GAAGAC 1 cut(s) 1401
BplI GAGNNNNNCTC 2 cut(s) 335, 367
BpmI CTGGAG 1 cut(s) 848
Bpu10I CCTNAGC 1 cut(s) 470
Bpu14I TTCGAA 1 cut(s) 307
BpuEI CTTGAG 4 cut(s) 536, 782, 881, 1109
BsaJI CCNNGG 4 cut(s) 27, 652, 849, 1326
Bsc4I CCNNNNNNNGG 2 cut(s) 533, 781
Bse1I ACTGG 4 cut(s) 756, 933, 1043, 1145
Bse3DI GCAATG 1 cut(s) 613
BseBI CCWGG 2 cut(s) 28, 851
BseDI CCNNGG 4 cut(s) 27, 652, 849, 1326
BseGI GGATG 3 cut(s) 647, 811, 1336
BseLI CCNNNNNNNGG 2 cut(s) 533, 781
BseMI GCAATG 1 cut(s) 613
BseMII CTCAG 2 cut(s) 461, 1046
BseNI ACTGG 4 cut(s) 756, 933, 1043, 1145
BseRI GAGGAG 2 cut(s) 226, 274
BseXI GCAGC 1 cut(s) 553
BshFI GGCC 1 cut(s) 854
BslI CCNNNNNNNGG 2 cut(s) 533, 781
BsmAI GTCTC 2 cut(s) 554, 1181
BsnI GGCC 1 cut(s) 854
Bsp119I TTCGAA 1 cut(s) 307
Bsp143I GATC 9 cut(s) 4, 231, 241, 262, 381, 658, 745, 1067, 1132
BspACI CCGC 1 cut(s) 142
BspANI GGCC 1 cut(s) 854
BspCNI CTCAG 2 cut(s) 462, 1045
BspLI GGNNCC 1 cut(s) 1167
BspPI GGATC 2 cut(s) 12, 239
BspQI GCTCTTC 1 cut(s) 1026
BspT104I TTCGAA 1 cut(s) 307
BsrDI GCAATG 1 cut(s) 613
BsrI ACTGG 4 cut(s) 756, 933, 1043, 1145
BssECI CCNNGG 4 cut(s) 27, 652, 849, 1326
BssMI GATC 9 cut(s) 4, 231, 241, 262, 381, 658, 745, 1067, 1132
BssT1I CCWWGG 2 cut(s) 652, 1326
Bst2UI CCWGG 2 cut(s) 28, 851
Bst4CI ACNGT 1 cut(s) 1379
Bst6I CTCTTC 2 cut(s) 1026, 1058
BstBI TTCGAA 1 cut(s) 307
BstC8I GCNNGC 1 cut(s) 1017
BstDEI CTNAG 2 cut(s) 470, 1032
BstENI CCTNNNNNAGG 1 cut(s) 531
BstF5I GGATG 3 cut(s) 647, 811, 1336
BstKTI GATC 9 cut(s) 7, 234, 244, 265, 384, 661, 748, 1070, 1135
BstMAI GTCTC 2 cut(s) 554, 1181
BstMBI GATC 9 cut(s) 4, 231, 241, 262, 381, 658, 745, 1067, 1132
BstMWI GCNNNNNNNGC 2 cut(s) 372, 905
BstNI CCWGG 2 cut(s) 28, 851
BstSCI CCNGG 2 cut(s) 26, 849
BstV1I GCAGC 1 cut(s) 553
BstV2I GAAGAC 1 cut(s) 1401
BstX2I RGATCY 1 cut(s) 231
BstYI RGATCY 1 cut(s) 231
BsuRI GGCC 1 cut(s) 854
BtsCI GGATG 3 cut(s) 647, 811, 1336
BtsI GCAGTG 1 cut(s) 375
BtsIMutI CAGTG 4 cut(s) 343, 375, 940, 1359
Cac8I GCNNGC 1 cut(s) 1017
Cfr13I GGNCC 1 cut(s) 144
Csp6I GTAC 3 cut(s) 623, 1036, 1249
CspCI CAANNNNNGTGG 2 cut(s) 1143, 1178
CviAII CATG 3 cut(s) 62, 905, 1113
CviQI GTAC 3 cut(s) 623, 1036, 1249
DdeI CTNAG 2 cut(s) 470, 1032
DpnI GATC 9 cut(s) 6, 233, 243, 264, 383, 660, 747, 1069, 1134
DpnII GATC 9 cut(s) 4, 231, 241, 262, 381, 658, 745, 1067, 1132
DrdI GACNNNNNNGTC 1 cut(s) 1382
DseDI GACNNNNNNGTC 1 cut(s) 1382
Eam1104I CTCTTC 2 cut(s) 1026, 1058
EarI CTCTTC 2 cut(s) 1026, 1058
Eco130I CCWWGG 2 cut(s) 652, 1326
Eco47I GGWCC 1 cut(s) 144
Eco57I CTGAAG 2 cut(s) 1082, 1329
EcoNI CCTNNNNNAGG 1 cut(s) 531
EcoRI GAATTC 1 cut(s) 1211
EcoRII CCWGG 2 cut(s) 26, 849
EcoT14I CCWWGG 2 cut(s) 652, 1326
ErhI CCWWGG 2 cut(s) 652, 1326
FaeI CATG 3 cut(s) 65, 908, 1116
FatI CATG 3 cut(s) 61, 904, 1112
FauNDI CATATG 1 cut(s) 176
Fnu4HI GCNGC 1 cut(s) 567
FokI GGATG 3 cut(s) 634, 818, 1343
Fsp4HI GCNGC 1 cut(s) 567
FspBI CTAG 3 cut(s) 197, 845, 1226
GluI GCNGC 1 cut(s) 567
GsuI CTGGAG 1 cut(s) 848
HaeIII GGCC 1 cut(s) 854
Hin1II CATG 3 cut(s) 65, 908, 1116
HincII GTYRAC 1 cut(s) 400
HindII GTYRAC 1 cut(s) 400
HinfI GANTC 5 cut(s) 47, 406, 1028, 1141, 1383
HphI GGTGA 3 cut(s) 496, 1062, 1183
Hpy166II GTNNAC 1 cut(s) 400
Hpy188I TCNGA 6 cut(s) 46, 126, 208, 241, 292, 1309
Hpy188III TCNNGA 9 cut(s) 197, 469, 581, 662, 799, 827, 941, 1025, 1088
Hpy8I GTNNAC 1 cut(s) 400
HpyAV CCTTC 4 cut(s) 356, 826, 1304, 1336
HpyCH4III ACNGT 1 cut(s) 1379
HpyCH4V TGCA 6 cut(s) 192, 280, 375, 721, 762, 908
HpyF10VI GCNNNNNNNGC 2 cut(s) 372, 905
HpyF3I CTNAG 2 cut(s) 470, 1032
Hsp92II CATG 3 cut(s) 65, 908, 1116
Kzo9I GATC 9 cut(s) 4, 231, 241, 262, 381, 658, 745, 1067, 1132
LguI GCTCTTC 1 cut(s) 1026
LmnI GCTCC 1 cut(s) 1012
Lsp1109I GCAGC 1 cut(s) 553
LweI GCATC 2 cut(s) 656, 1206
MaeI CTAG 3 cut(s) 197, 845, 1226
MaeIII GTNAC 6 cut(s) 104, 250, 338, 1108, 1254, 1335
MalI GATC 9 cut(s) 6, 233, 243, 264, 383, 660, 747, 1069, 1134
MboI GATC 9 cut(s) 4, 231, 241, 262, 381, 658, 745, 1067, 1132
MflI RGATCY 1 cut(s) 231
MlyI GAGTC 2 cut(s) 56, 1392
MmeI TCCRAC 3 cut(s) 149, 231, 248
MseI TTAA 5 cut(s) 441, 671, 768, 993, 1301
MspR9I CCNGG 2 cut(s) 28, 851
MvaI CCWGG 2 cut(s) 28, 851
MwoI GCNNNNNNNGC 2 cut(s) 372, 905
NdeI CATATG 1 cut(s) 176
NdeII GATC 9 cut(s) 4, 231, 241, 262, 381, 658, 745, 1067, 1132
NlaIII CATG 3 cut(s) 65, 908, 1116
NlaIV GGNNCC 1 cut(s) 1167
NmuCI GTSAC 3 cut(s) 104, 250, 338
NspV TTCGAA 1 cut(s) 307
PciSI GCTCTTC 1 cut(s) 1026
PcsI WCGNNNNNNNCGW 1 cut(s) 122
PfeI GAWTC 3 cut(s) 406, 1028, 1141
PkrI GCNGC 1 cut(s) 568
PleI GAGTC 2 cut(s) 55, 1391
PpsI GAGTC 2 cut(s) 55, 1391
PshBI ATTAAT 1 cut(s) 768
Psp6I CCWGG 2 cut(s) 26, 849
PspGI CCWGG 2 cut(s) 26, 849
PspN4I GGNNCC 1 cut(s) 1167
PspPI GGNCC 1 cut(s) 144
PsuI RGATCY 1 cut(s) 231
RsaI GTAC 3 cut(s) 624, 1037, 1250
RsaNI GTAC 3 cut(s) 623, 1036, 1249
SapI GCTCTTC 1 cut(s) 1026
SaqAI TTAA 5 cut(s) 441, 671, 768, 993, 1301
SatI GCNGC 1 cut(s) 567
Sau3AI GATC 9 cut(s) 4, 231, 241, 262, 381, 658, 745, 1067, 1132
Sau96I GGNCC 1 cut(s) 144
ScaI AGTACT 2 cut(s) 1037, 1250
SchI GAGTC 2 cut(s) 56, 1392
ScrFI CCNGG 2 cut(s) 28, 851
SfaNI GCATC 2 cut(s) 656, 1206
SfuI TTCGAA 1 cut(s) 307
SinI GGWCC 1 cut(s) 144
SmlI CTYRAG 5 cut(s) 551, 797, 860, 1088, 1399
SmoI CTYRAG 5 cut(s) 551, 797, 860, 1088, 1399
SsiI CCGC 1 cut(s) 142
SspI AATATT 1 cut(s) 1288
SspMI CTAG 3 cut(s) 197, 845, 1226
StyD4I CCNGG 2 cut(s) 26, 849
StyI CCWWGG 2 cut(s) 652, 1326
TaaI ACNGT 1 cut(s) 1379
TaqI TCGA 3 cut(s) 307, 731, 1381
TatI WGTACW 3 cut(s) 622, 1035, 1248
TfiI GAWTC 3 cut(s) 406, 1028, 1141
Tru1I TTAA 5 cut(s) 441, 671, 768, 993, 1301
Tru9I TTAA 5 cut(s) 441, 671, 768, 993, 1301
TscAI CASTG 4 cut(s) 343, 382, 940, 1359
TseFI GTSAC 3 cut(s) 104, 250, 338
TseI GCWGC 1 cut(s) 566
Tsp45I GTSAC 3 cut(s) 104, 250, 338
TspDTI ATGAA 1 cut(s) 1298
TspGWI ACGGA 1 cut(s) 1354
TspRI CASTG 4 cut(s) 343, 382, 940, 1359
VpaK11BI GGWCC 1 cut(s) 144
VspI ATTAAT 1 cut(s) 768
XagI CCTNNNNNAGG 1 cut(s) 531
XapI RAATTY 5 cut(s) 302, 715, 927, 1211, 1303
XbaI TCTAGA 1 cut(s) 196
XcmI CCANNNNNNNNNTGG 2 cut(s) 34, 1012
XspI CTAG 3 cut(s) 197, 845, 1226
ZrmI AGTACT 2 cut(s) 1037, 1250
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.